@lzehrung/codegraph 2.3.16 → 2.3.18

package/codegraph-skill/codegraph/SKILL.md

@@ -134,7 +134,7 @@ Current-state commands validate the on-disk index automatically and default to t
 - Repeated agent queries over one repo snapshot: prefer MCP so the index stays warm. MCP inputs are flat JSON objects and the server root is fixed at startup; send only fields in the mounted tool schema, never CLI flags such as `--root` or `--json`. Unknown tool fields are rejected as invalid parameters. If the first MCP call fails at startup or loses its transport, do not retry the same server; run `codegraph doctor`, use the equivalent CLI command for this session, and restart the agent client after package upgrades.
 - Durable graph handoff: use `codegraph graph --root . ./src --json --output codegraph.json` rather than parsing display text. `graph --json` and `index --json` payloads include an `analysis` object (`mode`, `backend`, `label`, fallback counts); when `mode` is `mixed` or `reduced` the run used regex/graph-only extraction for some or all files, so treat symbol accuracy accordingly. Degraded runs also print a `Backend:` warning on stderr even without `--progress`.
 - Search and inspect performance diagnosis: add `--report` for JSON on stderr or `--report-file <path>` for a file while keeping normal command output unchanged.
-- Index discovery diagnosis: `--report` timing JSON can include `sourceDiscoveryMs`, `metadataDiscoveryMs`, `gitListMs`, `filesystemScanMs`, and `cacheProbeMs` when those steps run.
+- Index discovery diagnosis: `--report` timing JSON can include `sourceDiscoveryMs`, `metadataDiscoveryMs`, `gitListMs`, `filesystemScanMs`, and `cacheProbeMs` when those steps run. Named `steps` can also include discovery and post-parse persistence durations (`cache-probe`, `persist-cache`, `workspace-manifests`, `index-manifest`, `finalize`, `snapshot-write`); incremental updates include `snapshot-write` when the project snapshot is rewritten.
 
 ### Human Graph Viewer
 

package/dist/bin/cli.js

@@ -1244,7 +1244,7 @@ function createInteractiveProgressDisplay(write, delayMs = 0) {
     if (!rendered)
       return;
     clear();
-    const verb = progressCompleteVerb(mode);
+    const verb = progressCompleteVerb(update.mode ?? mode);
     const fileCount = formatFileCount(update.total, "words");
     const elapsed = update.elapsedMs === void 0 ? "" : ` in ${formatDuration(update.elapsedMs)}`;
     write(`${verb} project index: ${fileCount}${elapsed}.
@@ -1359,7 +1359,7 @@ function createLogProgressDisplay(write, delayMs = 0) {
         stopTimers();
         if (!rendered)
           return;
-        const verb = progressCompleteVerb(mode);
+        const verb = progressCompleteVerb(update.mode ?? mode);
         const elapsed = update.elapsedMs === void 0 ? "" : ` in ${formatDuration(update.elapsedMs)}`;
         write(`[Progress] ${verb} project index: ${formatFileCount(update.total, "words")}${elapsed}.
 `);
@@ -29469,6 +29469,88 @@ var init_locals_and_exports = __esm({
   }
 });
 
+// dist/indexer/expand-star-imports.js
+function symbolsForStarImport(target) {
+  const localExports = [];
+  for (const entry of target.exports) {
+    if (entry.type === "local") {
+      localExports.push({ name: entry.exportedAs, symbol: entry.target });
+    }
+  }
+  if (localExports.length)
+    return localExports;
+  const visible = [];
+  for (const local of target.locals) {
+    if (local.localName.startsWith("_"))
+      continue;
+    visible.push({ name: local.localName, symbol: local });
+  }
+  return visible;
+}
+function expandStarImports(modules, opts) {
+  const expandedImportKey = (binding) => {
+    const typeOnly = binding.typeOnly ?? false;
+    if (binding.kind === "named") {
+      return JSON.stringify(["named", binding.from, binding.resolved, typeOnly, binding.local, binding.imported]);
+    }
+    if (binding.kind === "namespace") {
+      return JSON.stringify(["namespace", binding.from, binding.resolved, typeOnly, binding.localNS]);
+    }
+    return null;
+  };
+  for (const mod2 of modules.values()) {
+    const expandedImportKeys = /* @__PURE__ */ new Set();
+    for (const existing of mod2.imports) {
+      const key = expandedImportKey(existing);
+      if (key)
+        expandedImportKeys.add(key);
+    }
+    for (const imp of [...mod2.imports]) {
+      if (imp.kind !== "star" || typeof imp.resolved !== "string")
+        continue;
+      const target = modules.get(fileIdentityKey(imp.resolved));
+      if (!target)
+        continue;
+      const targetSupport = supportForFile(imp.resolved, opts?.languageExtensions);
+      const exportedSymbols = symbolsForStarImport(target);
+      const seen = /* @__PURE__ */ new Set();
+      for (const { name, symbol: symbol2 } of exportedSymbols) {
+        if (!name || seen.has(name))
+          continue;
+        seen.add(name);
+        const treatAsNamespace = targetSupport?.id === "ruby" && symbol2.kind === SymbolKind.Class;
+        const expandedImport = treatAsNamespace ? {
+          kind: "namespace",
+          localNS: name,
+          from: imp.from,
+          resolved: imp.resolved,
+          ...imp.typeOnly !== void 0 ? { typeOnly: imp.typeOnly } : {}
+        } : {
+          kind: "named",
+          local: name,
+          imported: name,
+          from: imp.from,
+          resolved: imp.resolved,
+          ...imp.typeOnly !== void 0 ? { typeOnly: imp.typeOnly } : {}
+        };
+        const expandedImportKeyValue = expandedImportKey(expandedImport);
+        if (!expandedImportKeyValue || expandedImportKeys.has(expandedImportKeyValue))
+          continue;
+        expandedImportKeys.add(expandedImportKeyValue);
+        mod2.imports.push(expandedImport);
+      }
+    }
+  }
+}
+var init_expand_star_imports = __esm({
+  "dist/indexer/expand-star-imports.js"() {
+    "use strict";
+    init_languages();
+    init_paths();
+    init_types2();
+  }
+});
+
 // dist/languages/queryGenerator.js
 function generateChunkingQuery(def) {
   const parts = [];
@@ -32986,6 +33068,8 @@ function getDiskModuleCache(projectRoot, opts) {
     const cache = {
       db,
       load: db.prepare("SELECT sig, version, payload FROM module_cache WHERE file = ?"),
+      loadAll: db.prepare("SELECT file, sig, version, payload FROM module_cache WHERE version = ?"),
+      listFiles: db.prepare("SELECT file FROM module_cache WHERE version = ?"),
       write: db.prepare(`INSERT INTO module_cache (file, sig, version, payload, updated_at)
        VALUES (?, ?, ?, ?, ?)
        ON CONFLICT(file) DO UPDATE SET
@@ -33189,6 +33273,54 @@ function transformModulePaths(projectRoot, module2, toRelative) {
     imports: module2.imports.map((binding) => typeof binding.resolved === "string" ? { ...binding, resolved: transform2(binding.resolved) } : binding)
   };
 }
+function listDiskCachedModuleFiles(projectRoot, opts) {
+  if ((opts?.cache ?? "off") !== "disk")
+    return null;
+  if (!isNodeSqliteUsable())
+    return null;
+  if (!diskModuleCacheExists(projectRoot, opts))
+    return /* @__PURE__ */ new Set();
+  try {
+    const cache = getDiskModuleCache(projectRoot, opts);
+    const rows = cache.listFiles.all(PARSED_CACHE_VERSION);
+    return new Set(rows.map((row) => row.file));
+  } catch (error51) {
+    if (isNodeSqliteUnavailableError(error51)) {
+      reportMissingNodeSqlite(opts?.logLevel, error51);
+      return null;
+    }
+    return null;
+  }
+}
+function loadAllCachedModules(projectRoot, opts) {
+  if ((opts?.cache ?? "off") !== "disk")
+    return null;
+  if (!isNodeSqliteUsable())
+    return null;
+  if (!diskModuleCacheExists(projectRoot, opts))
+    return /* @__PURE__ */ new Map();
+  try {
+    const cache = getDiskModuleCache(projectRoot, opts);
+    return cache.db.transaction(() => {
+      const rows = cache.loadAll.all(PARSED_CACHE_VERSION);
+      const modules = /* @__PURE__ */ new Map();
+      for (const row of rows) {
+        const parsed = JSON.parse(brotliDecompressSync(row.payload).toString("utf8"));
+        if (!isModuleIndex(parsed))
+          continue;
+        const rehydrated = transformModulePaths(projectRoot, parsed, false);
+        modules.set(fileIdentityKey(rehydrated.file), { sig: row.sig, mod: rehydrated });
+      }
+      return modules;
+    })();
+  } catch (error51) {
+    if (isNodeSqliteUnavailableError(error51)) {
+      reportMissingNodeSqlite(opts?.logLevel, error51);
+      return null;
+    }
+    return null;
+  }
+}
 function tryLoadFromCache(projectRoot, file2, sig, opts, report, diskCacheAvailable = true) {
   const mode = opts?.cache ?? "off";
   const cacheReport = initCacheReport(report, mode);
@@ -51648,11 +51780,14 @@ async function loadManifest(projectRoot, opts, report) {
     return null;
   }
 }
+function serializeIndexManifest(manifest) {
+  return JSON.stringify(manifest);
+}
 async function writeManifest2(projectRoot, opts, manifest) {
   try {
     const manifestPath = manifestFilePath(projectRoot, opts);
     await fsp21.mkdir(path41.dirname(manifestPath), { recursive: true });
-    await writeManifestAtomically(manifestPath, JSON.stringify(manifest, null, 2));
+    await writeManifestAtomically(manifestPath, serializeIndexManifest(manifest));
     return true;
   } catch (error51) {
     logWithLevel(opts?.logLevel, "warn", "Warning: Failed to write manifest:", error51);
@@ -52771,8 +52906,9 @@ async function tryLoadProjectIndexSnapshot(projectRoot, opts, manifestEntries, r
   if ((opts?.cache ?? "off") !== "disk")
     return null;
   try {
-    const parsedSnapshot = await readParsedSnapshot(projectSnapshotPath(projectRoot, opts));
-    const payload = transformCachedProjectSnapshot(projectSnapshotPath(projectRoot, opts), parsedSnapshot.identity, parsedSnapshot.payload, projectRoot);
+    const snapshotPath = projectSnapshotPath(projectRoot, opts);
+    const parsedSnapshot = await readParsedSnapshot(snapshotPath);
+    const payload = transformCachedProjectSnapshot(snapshotPath, parsedSnapshot.identity, parsedSnapshot.payload, projectRoot);
     const nativeRuntimeFingerprint = getNativeRuntimeFingerprint(opts?.native);
     const implementationFingerprint = getImplementationFingerprint();
     if (!isProjectIndexSnapshotPayload(payload)) {
@@ -52787,7 +52923,11 @@ async function tryLoadProjectIndexSnapshot(projectRoot, opts, manifestEntries, r
       nodes: new Set(payload.graph.nodes),
       edges: payload.graph.edges
     };
-    const modules = new Map(payload.modules.map((moduleIndex) => [fileIdentityKey(moduleIndex.file), moduleIndex]));
+    const modules = collectSnapshotModules(projectRoot, opts, payload, snapshotPath, parsedSnapshot.identity);
+    if (!modules || !thinSnapshotModulesComplete(payload, modules)) {
+      recordSnapshotInvalidation(snapshotPath, "thin snapshot missing disk-cached modules", opts?.logLevel);
+      return null;
+    }
     const shouldHydrateBloomFilters = opts?.useBloomFilters ?? true;
     const index = {
       graph,
@@ -52838,9 +52978,12 @@ async function tryLoadProjectSnapshotModules(projectRoot, opts, fileSignatures,
     }
     const normalizedFileSignatures = new Map(Object.entries(payload.fileSignatures).map(([file2, signature]) => [fileIdentityKey(file2), signature]));
     const normalizedCurrentSignatures = new Map(Array.from(fileSignatures, ([file2, signature]) => [fileIdentityKey(file2), signature]));
+    const snapshotPath = projectSnapshotPath(projectRoot, opts);
+    const candidates = collectSnapshotModules(projectRoot, opts, payload, snapshotPath, parsedSnapshot.identity);
+    if (!candidates)
+      return /* @__PURE__ */ new Map();
     const modules = /* @__PURE__ */ new Map();
-    for (const mod2 of payload.modules) {
-      const moduleKey = fileIdentityKey(mod2.file);
+    for (const [moduleKey, mod2] of candidates) {
       const signature = normalizedCurrentSignatures.get(moduleKey);
       const snapshotSignature = normalizedFileSignatures.get(moduleKey);
       if (!signature || !snapshotSignature || !snapshotSignatureMatches(snapshotSignature, signature))
@@ -52911,7 +53054,7 @@ function persistedBloomFiltersFromSnapshot(value, projectRoot) {
   if (!migrated || typeof migrated !== "object")
     return null;
   const payload = migrated;
-  if (payload.version !== PROJECT_SNAPSHOT_VERSION || typeof payload.projectRoot !== "string" || payload.implementationFingerprint !== getImplementationFingerprint()) {
+  if (!isSupportedProjectSnapshotVersion(payload.version) || typeof payload.projectRoot !== "string" || payload.implementationFingerprint !== getImplementationFingerprint()) {
     return null;
   }
   const bloomFilters = payload.bloomFilters;
@@ -52936,6 +53079,76 @@ function createPersistedBloomFilters(bloomFilters, fileSignatures, projectRoot)
     }
   };
 }
+function isSupportedProjectSnapshotVersion(version3) {
+  return version3 === PROJECT_SNAPSHOT_VERSION || version3 === LEGACY_EMBEDDED_MODULE_SNAPSHOT_VERSION;
+}
+function snapshotHydratesModulesFromDisk(version3) {
+  return version3 === PROJECT_SNAPSHOT_VERSION;
+}
+function mutableModuleIndex(mod2) {
+  if (!Object.isFrozen(mod2) && !Object.isFrozen(mod2.imports) && !Object.isFrozen(mod2.exports) && !Object.isFrozen(mod2.locals)) {
+    return mod2;
+  }
+  return {
+    file: mod2.file,
+    exports: [...mod2.exports],
+    imports: [...mod2.imports],
+    locals: [...mod2.locals]
+  };
+}
+function modulesForThinSnapshot(index, projectRoot, opts) {
+  const modules = [...index.byFile.values()];
+  const cachedFiles = listDiskCachedModuleFiles(projectRoot, opts);
+  if (!cachedFiles)
+    return modules;
+  return modules.filter((module2) => !cachedFiles.has(cacheRelativePath(projectRoot, module2.file)));
+}
+function collectSnapshotModules(projectRoot, opts, payload, snapshotPath, identity) {
+  const cached2 = hydratedSnapshotModulesCache.get(snapshotPath);
+  if (cached2 && cached2.root === projectRoot && sameSnapshotFileIdentity(cached2.identity, identity)) {
+    setBoundedSnapshotCache(hydratedSnapshotModulesCache, snapshotPath, cached2);
+    return cached2.modules;
+  }
+  const modules = /* @__PURE__ */ new Map();
+  for (const mod2 of payload.modules) {
+    modules.set(fileIdentityKey(mod2.file), mod2);
+  }
+  if (snapshotHydratesModulesFromDisk(payload.version)) {
+    const cachedModules = loadAllCachedModules(projectRoot, opts);
+    if (!cachedModules && modules.size === 0)
+      return null;
+    if (cachedModules) {
+      for (const [key, row] of cachedModules) {
+        if (modules.has(key))
+          continue;
+        modules.set(key, row.mod);
+      }
+    }
+    for (const [key, mod2] of modules) {
+      if (!mod2.imports.some((binding) => binding.kind === "star"))
+        continue;
+      modules.set(key, mutableModuleIndex(mod2));
+    }
+    expandStarImports(modules, opts);
+    for (const [key, mod2] of modules) {
+      if (Object.isFrozen(mod2))
+        continue;
+      modules.set(key, freezeSnapshotPayload(mod2));
+    }
+  }
+  const entry = { identity, root: projectRoot, modules };
+  setBoundedSnapshotCache(hydratedSnapshotModulesCache, snapshotPath, entry);
+  return modules;
+}
+function thinSnapshotModulesComplete(payload, modules) {
+  if (!snapshotHydratesModulesFromDisk(payload.version))
+    return true;
+  for (const file2 of Object.keys(payload.fileSignatures)) {
+    if (!modules.has(fileIdentityKey(file2)))
+      return false;
+  }
+  return true;
+}
 function snapshotSignatureMatches(snapshotSignature, currentSignature) {
   const matchingGitSignature = !!snapshotSignature.gitSig && !!currentSignature.gitSig && snapshotSignature.gitSig === currentSignature.gitSig;
   if (matchingGitSignature)
@@ -52961,7 +53174,7 @@ async function writeProjectIndexSnapshot(projectRoot, opts, index, filesSignatur
       nodes: [...index.graph.nodes],
       edges: index.graph.edges
     },
-    modules: [...index.byFile.values()],
+    modules: modulesForThinSnapshot(index, projectRoot, opts),
     fileSignatures,
     ...index.languageExtensions ? { languageExtensions: index.languageExtensions } : {},
     ...normalizedSnapshotNativeMode(index.nativeMode) ? { nativeMode: normalizedSnapshotNativeMode(index.nativeMode) } : {},
@@ -52979,6 +53192,7 @@ async function writeProjectIndexSnapshot(projectRoot, opts, index, filesSignatur
     const identity = await snapshotFileIdentity(snapshotPath);
     transformedSnapshotCache.delete(snapshotPath);
     transformedSnapshotModulesCache.delete(snapshotPath);
+    hydratedSnapshotModulesCache.delete(snapshotPath);
     setBoundedSnapshotCache(parsedSnapshotCache, snapshotPath, { identity, compressed, payload });
     index.projectSnapshotIdentity = projectSnapshotIdentity;
     if (serializedBloomFilters) {
@@ -53295,13 +53509,13 @@ function isProjectSnapshotModulesPayload(value) {
   if (!value || typeof value !== "object")
     return false;
   const payload = value;
-  return payload.version === PROJECT_SNAPSHOT_VERSION && typeof payload.filesSignature === "string" && typeof payload.projectRoot === "string" && typeof payload.nativeRuntimeFingerprint === "string" && typeof payload.implementationFingerprint === "string" && /^[a-f0-9]{64}$/.test(payload.implementationFingerprint) && Array.isArray(payload.modules) && payload.modules.every(isModuleIndex2) && isSnapshotFileSignatureRecord(payload.fileSignatures) && (payload.nativeMode === void 0 || isSnapshotNativeMode(payload.nativeMode));
+  return isSupportedProjectSnapshotVersion(payload.version) && typeof payload.filesSignature === "string" && typeof payload.projectRoot === "string" && typeof payload.nativeRuntimeFingerprint === "string" && typeof payload.implementationFingerprint === "string" && /^[a-f0-9]{64}$/.test(payload.implementationFingerprint) && Array.isArray(payload.modules) && payload.modules.every(isModuleIndex2) && isSnapshotFileSignatureRecord(payload.fileSignatures) && (payload.nativeMode === void 0 || isSnapshotNativeMode(payload.nativeMode));
 }
 function isProjectIndexSnapshotPayload(value) {
   if (!value || typeof value !== "object")
     return false;
   const payload = value;
-  return payload.version === PROJECT_SNAPSHOT_VERSION && typeof payload.filesSignature === "string" && typeof payload.projectRoot === "string" && typeof payload.nativeRuntimeFingerprint === "string" && typeof payload.implementationFingerprint === "string" && /^[a-f0-9]{64}$/.test(payload.implementationFingerprint) && !!payload.graph && Array.isArray(payload.graph.nodes) && payload.graph.nodes.every((node) => typeof node === "string") && Array.isArray(payload.graph.edges) && payload.graph.edges.every(isGraphEdge) && Array.isArray(payload.modules) && payload.modules.every(isModuleIndex2) && isSnapshotFileSignatureRecord(payload.fileSignatures) && (payload.nativeMode === void 0 || isSnapshotNativeMode(payload.nativeMode)) && (payload.languageExtensions === void 0 || isLanguageExtensionMap(payload.languageExtensions)) && (payload.bloomFilters === void 0 || isSerializedBloomFilterRecord(payload.bloomFilters)) && (payload.analysis === void 0 || isAnalysisSummary(payload.analysis)) && (payload.analysisReport === void 0 || isSnapshotAnalysisReport(payload.analysisReport)) && (payload.projectFiles === void 0 || Array.isArray(payload.projectFiles) && payload.projectFiles.every(isProjectFileInfo));
+  return isSupportedProjectSnapshotVersion(payload.version) && typeof payload.filesSignature === "string" && typeof payload.projectRoot === "string" && typeof payload.nativeRuntimeFingerprint === "string" && typeof payload.implementationFingerprint === "string" && /^[a-f0-9]{64}$/.test(payload.implementationFingerprint) && !!payload.graph && Array.isArray(payload.graph.nodes) && payload.graph.nodes.every((node) => typeof node === "string") && Array.isArray(payload.graph.edges) && payload.graph.edges.every(isGraphEdge) && Array.isArray(payload.modules) && payload.modules.every(isModuleIndex2) && isSnapshotFileSignatureRecord(payload.fileSignatures) && (payload.nativeMode === void 0 || isSnapshotNativeMode(payload.nativeMode)) && (payload.languageExtensions === void 0 || isLanguageExtensionMap(payload.languageExtensions)) && (payload.bloomFilters === void 0 || isSerializedBloomFilterRecord(payload.bloomFilters)) && (payload.analysis === void 0 || isAnalysisSummary(payload.analysis)) && (payload.analysisReport === void 0 || isSnapshotAnalysisReport(payload.analysisReport)) && (payload.projectFiles === void 0 || Array.isArray(payload.projectFiles) && payload.projectFiles.every(isProjectFileInfo));
 }
 function analysisReportFromBuildReport(report) {
   if (!report?.backend && !report?.graph) {
@@ -53525,7 +53739,7 @@ function isEdgeTo(value) {
     return typeof edgeTo.name === "string";
   return false;
 }
-var SNAPSHOT_SYMBOL_KINDS, PROJECT_SNAPSHOT_VERSION, BLOOM_FILTER_SNAPSHOT_VERSION, BLOOM_FILTER_SNAPSHOT_FILENAME, BLOOM_FILTER_MIN_SIZE, BLOOM_FILTER_MAX_SIZE, BLOOM_FILTER_MIN_HASH_COUNT, BLOOM_FILTER_MAX_HASH_COUNT, DETAILED_SYMBOL_GRAPH_SNAPSHOT_VERSION, DETAILED_SYMBOL_GRAPH_SNAPSHOT_FILENAME, SNAPSHOT_TEMP_RETENTION_MS, SNAPSHOT_TEMP_SUFFIX, MAX_SNAPSHOT_CACHE_ENTRIES, parsedSnapshotCache, transformedSnapshotCache, transformedSnapshotModulesCache, detailedSymbolGraphCache;
+var SNAPSHOT_SYMBOL_KINDS, PROJECT_SNAPSHOT_VERSION, LEGACY_EMBEDDED_MODULE_SNAPSHOT_VERSION, BLOOM_FILTER_SNAPSHOT_VERSION, BLOOM_FILTER_SNAPSHOT_FILENAME, BLOOM_FILTER_MIN_SIZE, BLOOM_FILTER_MAX_SIZE, BLOOM_FILTER_MIN_HASH_COUNT, BLOOM_FILTER_MAX_HASH_COUNT, DETAILED_SYMBOL_GRAPH_SNAPSHOT_VERSION, DETAILED_SYMBOL_GRAPH_SNAPSHOT_FILENAME, SNAPSHOT_TEMP_RETENTION_MS, SNAPSHOT_TEMP_SUFFIX, MAX_SNAPSHOT_CACHE_ENTRIES, parsedSnapshotCache, transformedSnapshotCache, transformedSnapshotModulesCache, hydratedSnapshotModulesCache, detailedSymbolGraphCache;
 var init_project_snapshot = __esm({
   "dist/indexer/build-cache/project-snapshot.js"() {
     "use strict";
@@ -53541,8 +53755,10 @@ var init_project_snapshot = __esm({
     init_options2();
     init_module_cache();
     init_location();
+    init_expand_star_imports();
     SNAPSHOT_SYMBOL_KINDS = new Set(Object.values(SymbolKind));
-    PROJECT_SNAPSHOT_VERSION = 10;
+    PROJECT_SNAPSHOT_VERSION = 11;
+    LEGACY_EMBEDDED_MODULE_SNAPSHOT_VERSION = 10;
     BLOOM_FILTER_SNAPSHOT_VERSION = 4;
     BLOOM_FILTER_SNAPSHOT_FILENAME = "bloom-filters.json";
     BLOOM_FILTER_MIN_SIZE = 1e3;
@@ -53557,6 +53773,7 @@ var init_project_snapshot = __esm({
     parsedSnapshotCache = /* @__PURE__ */ new Map();
     transformedSnapshotCache = /* @__PURE__ */ new Map();
     transformedSnapshotModulesCache = /* @__PURE__ */ new Map();
+    hydratedSnapshotModulesCache = /* @__PURE__ */ new Map();
     detailedSymbolGraphCache = /* @__PURE__ */ new Map();
   }
 });
@@ -55889,61 +56106,6 @@ function projectPatternsForLanguageExtensions(opts) {
     return void 0;
   return [...DEFAULT_PROJECT_PATTERNS, ...customPatterns];
 }
-function expandStarImports(modules, opts) {
-  const expandedImportKey = (binding) => {
-    const typeOnly = binding.typeOnly ?? false;
-    if (binding.kind === "named") {
-      return JSON.stringify(["named", binding.from, binding.resolved, typeOnly, binding.local, binding.imported]);
-    }
-    if (binding.kind === "namespace") {
-      return JSON.stringify(["namespace", binding.from, binding.resolved, typeOnly, binding.localNS]);
-    }
-    return null;
-  };
-  for (const mod2 of modules.values()) {
-    const expandedImportKeys = /* @__PURE__ */ new Set();
-    for (const existing of mod2.imports) {
-      const key = expandedImportKey(existing);
-      if (key)
-        expandedImportKeys.add(key);
-    }
-    for (const imp of [...mod2.imports]) {
-      if (imp.kind !== "star" || typeof imp.resolved !== "string")
-        continue;
-      const target = modules.get(fileIdentityKey(imp.resolved));
-      if (!target)
-        continue;
-      const targetSupport = supportForFile(imp.resolved, opts?.languageExtensions);
-      const exportedSymbols = target.exports.filter((entry) => entry.type === "local").length ? target.exports.filter((entry) => entry.type === "local").map((entry) => entry.target) : target.locals.filter((local) => !local.localName.startsWith("_"));
-      const seen = /* @__PURE__ */ new Set();
-      for (const symbol2 of exportedSymbols) {
-        if (!symbol2.localName || seen.has(symbol2.localName))
-          continue;
-        seen.add(symbol2.localName);
-        const treatAsNamespace = targetSupport?.id === "ruby" && symbol2.kind === SymbolKind.Class;
-        const expandedImport = treatAsNamespace ? {
-          kind: "namespace",
-          localNS: symbol2.localName,
-          from: imp.from,
-          resolved: imp.resolved,
-          ...imp.typeOnly !== void 0 ? { typeOnly: imp.typeOnly } : {}
-        } : {
-          kind: "named",
-          local: symbol2.localName,
-          imported: symbol2.localName,
-          from: imp.from,
-          resolved: imp.resolved,
-          ...imp.typeOnly !== void 0 ? { typeOnly: imp.typeOnly } : {}
-        };
-        const expandedImportKeyValue = expandedImportKey(expandedImport);
-        if (!expandedImportKeyValue || expandedImportKeys.has(expandedImportKeyValue))
-          continue;
-        expandedImportKeys.add(expandedImportKeyValue);
-        mod2.imports.push(expandedImport);
-      }
-    }
-  }
-}
 function toProjectIndexManifestEntry(entry) {
   const cacheSig = entry.cacheSig ?? entry.gitSig;
   return {
@@ -56008,11 +56170,11 @@ function emitIndexCheckActivity(opts, activity, current = 0, total = 0) {
     total
   });
 }
-function emitIndexBuildActivity(opts, activity, current, total) {
+function emitIndexBuildActivity(opts, activity, current, total, mode = "build") {
   opts?.onProgress?.({
     type: "progress",
     phase: "update",
-    mode: "build",
+    mode,
     message: activity,
     activity,
     current,
@@ -56021,7 +56183,7 @@ function emitIndexBuildActivity(opts, activity, current, total) {
 }
 async function timeIndexBuildPhase(args) {
   if (args.buildStartedAt !== void 0) {
-    emitIndexBuildActivity(args.opts, args.activity, args.current, args.total);
+    emitIndexBuildActivity(args.opts, args.activity, args.current, args.total, args.mode ?? "build");
   }
   const startedAt = performance7.now();
   const result = await args.fn();
@@ -57292,7 +57454,17 @@ async function buildProjectIndexIncremental(projectRoot, rawOpts) {
         ),
         buildReport: report
       });
-      await writeProjectIndexSnapshot(projectRoot, opts, index, projectSnapshotFilesSignature(manifestEntries, projectRoot));
+      await timeIndexBuildPhase({
+        opts,
+        timings,
+        buildStartedAt: updateStartedAt,
+        stepName: "snapshot-write",
+        activity: "Writing project snapshot",
+        current: allFiles.size,
+        total: allFiles.size,
+        mode: "update",
+        fn: () => writeProjectIndexSnapshot(projectRoot, opts, index, projectSnapshotFilesSignature(manifestEntries, projectRoot))
+      });
       if (updateStartedAt !== void 0) {
         emitIndexLifecycleProgress(opts, "complete", "update", index.byFile.size, performance7.now() - updateStartedAt);
       } else {
@@ -57463,6 +57635,7 @@ var init_build_index = __esm({
     init_projectedTree();
     init_imports();
     init_locals_and_exports();
+    init_expand_star_imports();
     init_shared2();
     init_bloomFilter();
     init_nativeBackendReport();

package/dist/cli/progress.js

@@ -86,7 +86,7 @@ function createInteractiveProgressDisplay(write, delayMs = 0) {
         if (!rendered)
             return;
         clear();
-        const verb = progressCompleteVerb(mode);
+        const verb = progressCompleteVerb(update.mode ?? mode);
         const fileCount = formatFileCount(update.total, "words");
         const elapsed = update.elapsedMs === undefined ? "" : ` in ${formatDuration(update.elapsedMs)}`;
         write(`${verb} project index: ${fileCount}${elapsed}.\n`);
@@ -199,7 +199,7 @@ function createLogProgressDisplay(write, delayMs = 0) {
                 stopTimers();
                 if (!rendered)
                     return;
-                const verb = progressCompleteVerb(mode);
+                const verb = progressCompleteVerb(update.mode ?? mode);
                 const elapsed = update.elapsedMs === undefined ? "" : ` in ${formatDuration(update.elapsedMs)}`;
                 write(`[Progress] ${verb} project index: ${formatFileCount(update.total, "words")}${elapsed}.\n`);
                 return;

package/dist/cli/progress.js.map

@@ -1 +1 @@
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package/dist/indexer/build-cache/manifest.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"manifest.d.ts","sourceRoot":"","sources":["../../../src/indexer/build-cache/manifest.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EAAE,eAAe,EAAE,iBAAiB,EAAE,MAAM,uBAAuB,CAAC;AAEhF,OAAO,EAAgB,KAAK,QAAQ,EAAE,MAAM,kBAAkB,CAAC;AAC/D,OAAO,KAAK,EAAE,IAAI,EAAE,MAAM,gBAAgB,CAAC;AAC3C,OAAO,EAIL,KAAK,2BAA2B,EACjC,MAAM,4BAA4B,CAAC;AAmBpC,OAAO,KAAK,EAAE,YAAY,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAC7D,OAAO,KAAK,EAAE,oBAAoB,EAAE,MAAM,cAAc,CAAC;AAUzD,wBAAsB,uCAAuC,CAC3D,WAAW,EAAE,MAAM,EACnB,aAAa,CAAC,EAAE,SAAS,MAAM,EAAE,EACjC,SAAS,CAAC,EAAE,2BAA2B,EACvC,QAAQ,CAAC,EAAE,QAAQ,GAClB,OAAO,CAAC,IAAI,EAAE,CAAC,CA+CjB;AAED,eAAO,MAAM,gBAAgB,IAAI,CAAC;AAClC,MAAM,MAAM,iBAAiB,GAAG,eAAe,CAAC;AAEhD,MAAM,MAAM,aAAa,GAAG;IAC1B,OAAO,EAAE,MAAM,CAAC;IAChB,WAAW,EAAE,MAAM,CAAC;IACpB,SAAS,EAAE,MAAM,CAAC;IAClB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,UAAU,CAAC,EAAE,MAAM,CAAC;IACpB,YAAY,CAAC,EAAE,iBAAiB,CAAC;IACjC,YAAY,CAAC,EAAE,oBAAoB,CAAC;IACpC,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,CAAC;IACzC;;;OAGG;IACH,8BAA8B,CAAC,EAAE,MAAM,CAAC;IACxC;;;OAGG;IACH,cAAc,CAAC,EAAE,MAAM,EAAE,CAAC;IAC1B;;;;;;OAMG;IACH,kBAAkB,CAAC,EAAE,MAAM,EAAE,CAAC;IAC9B,6BAA6B,CAAC,EAAE,MAAM,CAAC;CACxC,CAAC;AAEF,wBAAgB,wBAAwB,CACtC,WAAW,EAAE,MAAM,EACnB,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,EACxC,UAAU,EAAE,OAAO,GAClB,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,CAkCnC;AACD,KAAK,gBAAgB,GAAG;IACtB,IAAI,EAAE,MAAM,CAAC;IACb,KAAK,CAAC,EAAE,MAAM,CAAC;CAChB,CAAC;AAEF,wBAAgB,0BAA0B,CACxC,WAAW,EAAE,MAAM,EACnB,KAAK,EAAE,SAAS,MAAM,EAAE,EACxB,KAAK,EAAE,MAAM,EACb,eAAe,CAAC,EAAE,MAAM,GACvB,MAAM,EAAE,CAmBV;AACD,wBAAsB,oCAAoC,CACxD,WAAW,EAAE,MAAM,EACnB,KAAK,EAAE,SAAS,MAAM,EAAE,EACxB,KAAK,EAAE,MAAM,GACZ,OAAO,CAAC,MAAM,EAAE,CAAC,CAanB;AAED,wBAAgB,8BAA8B,CAC5C,WAAW,EAAE,MAAM,EACnB,KAAK,EAAE,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,GAAG,SAAS,GACnD,MAAM,CAAC,MAAM,EAAE,iBAAiB,CAAC,CAOnC;AAED,wBAAgB,qCAAqC,CACnD,WAAW,EAAE,MAAM,EACnB,iBAAiB,EAAE,MAAM,EACzB,KAAK,EAAE,OAAO,GACb,MAAM,EAAE,CAYV;AA0CD,wBAAsB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,QAAQ,CAAC,EAAE,QAAQ,GAAG,OAAO,CAAC,gBAAgB,CAAC,CAsC3G;AAuHD,wBAAsB,YAAY,CAChC,WAAW,EAAE,MAAM,EACnB,IAAI,CAAC,EAAE,YAAY,EACnB,MAAM,CAAC,EAAE,WAAW,GACnB,OAAO,CAAC,aAAa,GAAG,IAAI,CAAC,CAuC/B;AAUD,wBAAsB,aAAa,CACjC,WAAW,EAAE,MAAM,EACnB,IAAI,EAAE,YAAY,GAAG,SAAS,EAC9B,QAAQ,EAAE,aAAa,GACtB,OAAO,CAAC,OAAO,CAAC,CAUlB;AAED,wBAAsB,qBAAqB,CACzC,WAAW,EAAE,MAAM,EACnB,QAAQ,EAAE,aAAa,EACvB,IAAI,EAAE,YAAY,GAAG,SAAS,EAC9B,YAAY,EAAE,OAAO,GACpB,OAAO,CAAC;IAAE,UAAU,EAAE,MAAM,CAAC;IAAC,OAAO,EAAE,MAAM,CAAA;CAAE,CAAC,CAkBlD"}

package/dist/indexer/build-cache/manifest.js

@@ -374,11 +374,18 @@ export async function loadManifest(projectRoot, opts, report) {
         return null;
     }
 }
+/**
+ * Index manifests are compact JSON. Pretty-printing added formatting whitespace only.
+ * `loadManifest` uses `JSON.parse`, so pretty files from earlier versions still load.
+ */
+function serializeIndexManifest(manifest) {
+    return JSON.stringify(manifest);
+}
 export async function writeManifest(projectRoot, opts, manifest) {
     try {
         const manifestPath = manifestFilePath(projectRoot, opts);
         await fsp.mkdir(path.dirname(manifestPath), { recursive: true });
-        await writeManifestAtomically(manifestPath, JSON.stringify(manifest, null, 2));
+        await writeManifestAtomically(manifestPath, serializeIndexManifest(manifest));
         return true;
     }
     catch (error) {