@ltm-alpha/alpha-cs 1.6.0

package/dist/extraction/languages/r.js

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+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.rExtractor = void 0;
+const tree_sitter_helpers_1 = require("../tree-sitter-helpers");
+/**
+ * R language extractor (#828).
+ *
+ * R has no declaration syntax — everything is an expression, so every symbol
+ * the graph needs arrives through the visitNode hook rather than node-type
+ * lists:
+ *
+ *   - functions:   `name <- function(x) …` / `name = function(x) …` parse as
+ *                  binary_operator(lhs: identifier, rhs: function_definition).
+ *                  (`function(x) … -> name` right-assign of a function does
+ *                  not survive the grammar's precedence — the `->` binds inside
+ *                  the body — and the style is rare; deliberate gap.)
+ *   - variables:   top-level assignments only (locals would bloat the graph);
+ *                  ALL_CAPS / dotted-caps names extract as constants.
+ *   - imports:     `library(x)` / `require(x)` / `requireNamespace("x")` are
+ *                  ordinary calls; `source("file.R")` references another file.
+ *                  All are claimed so no noise call-edge to `library` remains
+ *                  (same pattern as Lua's `require`).
+ *   - classes:     S4 `setClass("Name", …)`, R5 `setRefClass("Name", …)`, and
+ *                  R6 `R6Class("Name", public = list(m = function() …))` are
+ *                  calls too; the class node is named by the first string
+ *                  argument and `name = function` entries in its list() args
+ *                  extract as methods inside the class scope.
+ *   - S4 generics: `setGeneric("name", …)` / `setMethod("name", "Class", fn)`
+ *                  extract as functions named by the first string argument.
+ *
+ * Calls themselves go through the generic call extraction (`call` nodes with a
+ * `function` field). Namespaced `pkg::fn(…)` keeps its qualified text;
+ * `obj$method(…)` extracts under its full text (resolution of `$`-dispatch is
+ * a known gap — R's S3 dispatch is runtime by design).
+ */
+const ASSIGN_LEFT = new Set(['<-', '<<-', '=']);
+const ASSIGN_RIGHT = new Set(['->', '->>']);
+const IMPORT_FNS = new Set(['library', 'require', 'requireNamespace', 'loadNamespace']);
+const CLASS_FNS = new Set(['setClass', 'setRefClass', 'R6Class', 'ggproto']);
+const GENERIC_FNS = new Set(['setGeneric', 'setMethod']);
+/** ALL_CAPS or DOTTED.CAPS top-level assignment → constant. */
+const CONSTANT_NAME = /^[A-Z][A-Z0-9._]*$/;
+/** The call's callee name when it is a bare identifier or `pkg::fn` (→ `fn`). */
+function calleeName(call, source) {
+    const fn = (0, tree_sitter_helpers_1.getChildByField)(call, 'function');
+    if (!fn)
+        return null;
+    if (fn.type === 'identifier')
+        return (0, tree_sitter_helpers_1.getNodeText)(fn, source);
+    if (fn.type === 'namespace_operator') {
+        const rhs = (0, tree_sitter_helpers_1.getChildByField)(fn, 'rhs');
+        if (rhs)
+            return (0, tree_sitter_helpers_1.getNodeText)(rhs, source);
+    }
+    return null;
+}
+/** First positional argument's value node of a call. */
+function firstArgValue(call) {
+    const args = (0, tree_sitter_helpers_1.getChildByField)(call, 'arguments');
+    if (!args)
+        return null;
+    for (let i = 0; i < args.namedChildCount; i++) {
+        const arg = args.namedChild(i);
+        if (arg?.type !== 'argument')
+            continue;
+        return (0, tree_sitter_helpers_1.getChildByField)(arg, 'value');
+    }
+    return null;
+}
+/** Text of a string node's content, or an identifier's text. */
+function literalOrIdentifier(node, source) {
+    if (!node)
+        return null;
+    if (node.type === 'identifier')
+        return (0, tree_sitter_helpers_1.getNodeText)(node, source);
+    if (node.type === 'string') {
+        for (let i = 0; i < node.namedChildCount; i++) {
+            const c = node.namedChild(i);
+            if (c?.type === 'string_content')
+                return (0, tree_sitter_helpers_1.getNodeText)(c, source);
+        }
+        return ''; // empty string literal
+    }
+    return null;
+}
+/** Emit one `name = function(…)` argument entry as a method in the current scope. */
+function emitMethodArg(entry, ctx) {
+    const entryName = (0, tree_sitter_helpers_1.getChildByField)(entry, 'name');
+    const entryValue = (0, tree_sitter_helpers_1.getChildByField)(entry, 'value');
+    if (!entryName || entryValue?.type !== 'function_definition')
+        return;
+    const params = (0, tree_sitter_helpers_1.getChildByField)(entryValue, 'parameters');
+    const method = ctx.createNode('method', (0, tree_sitter_helpers_1.getNodeText)(entryName, ctx.source), entry, {
+        signature: params ? (0, tree_sitter_helpers_1.getNodeText)(params, ctx.source) : undefined,
+    });
+    const body = (0, tree_sitter_helpers_1.getChildByField)(entryValue, 'body');
+    if (method && body) {
+        ctx.pushScope(method.id);
+        ctx.visitNode(body); // hook-aware walk — see the function-assignment note below
+        ctx.popScope();
+    }
+}
+/**
+ * Extract a class call's methods. Two shapes:
+ *  - inside list() arguments — R5 `methods = list(deposit = function(x) …)`,
+ *    R6 `public = list(…)` / `private = list(…)`;
+ *  - DIRECT named function arguments — ggproto's style:
+ *    `ggproto("GeomPoint", Geom, draw_panel = function(…) …)`.
+ * Also records the parent class as an `extends` reference: ggproto's second
+ * positional identifier argument, R6's `inherit = Parent`, S4's
+ * `contains = "Parent"`.
+ */
+function extractClassMembers(classCall, classId, ctx) {
+    const args = (0, tree_sitter_helpers_1.getChildByField)(classCall, 'arguments');
+    if (!args)
+        return;
+    let positional = 0;
+    for (let i = 0; i < args.namedChildCount; i++) {
+        const arg = args.namedChild(i);
+        if (arg?.type !== 'argument')
+            continue;
+        const argName = (0, tree_sitter_helpers_1.getChildByField)(arg, 'name');
+        const value = (0, tree_sitter_helpers_1.getChildByField)(arg, 'value');
+        if (!argName) {
+            positional++;
+            // ggproto("Name", Parent, …) — the 2nd positional identifier is the parent.
+            if (positional === 2 && value?.type === 'identifier') {
+                ctx.addUnresolvedReference({
+                    fromNodeId: classId,
+                    referenceName: (0, tree_sitter_helpers_1.getNodeText)(value, ctx.source),
+                    referenceKind: 'extends',
+                    line: value.startPosition.row + 1,
+                    column: value.startPosition.column,
+                });
+            }
+            continue;
+        }
+        const argNameText = (0, tree_sitter_helpers_1.getNodeText)(argName, ctx.source);
+        // R6 `inherit = Parent` / S4 `contains = "Parent"`.
+        if ((argNameText === 'inherit' || argNameText === 'contains') && value) {
+            const parent = literalOrIdentifier(value, ctx.source);
+            if (parent) {
+                ctx.addUnresolvedReference({
+                    fromNodeId: classId,
+                    referenceName: parent,
+                    referenceKind: 'extends',
+                    line: value.startPosition.row + 1,
+                    column: value.startPosition.column,
+                });
+            }
+            continue;
+        }
+        // Direct named function argument (ggproto methods).
+        if (value?.type === 'function_definition') {
+            emitMethodArg(arg, ctx);
+            continue;
+        }
+        // list(…) of named function arguments (R5/R6 methods).
+        if (value?.type === 'call' && calleeName(value, ctx.source) === 'list') {
+            const listArgs = (0, tree_sitter_helpers_1.getChildByField)(value, 'arguments');
+            if (!listArgs)
+                continue;
+            for (let j = 0; j < listArgs.namedChildCount; j++) {
+                const entry = listArgs.namedChild(j);
+                if (entry?.type === 'argument')
+                    emitMethodArg(entry, ctx);
+            }
+        }
+    }
+}
+exports.rExtractor = {
+    functionTypes: [], // named functions are assignments — handled in visitNode
+    classTypes: [],
+    methodTypes: [],
+    interfaceTypes: [],
+    structTypes: [],
+    enumTypes: [],
+    typeAliasTypes: [],
+    importTypes: [], // library()/require()/source() are calls — handled in visitNode
+    callTypes: ['call'],
+    variableTypes: [], // top-level assignments — handled in visitNode
+    nameField: 'name',
+    bodyField: 'body',
+    paramsField: 'parameters',
+    visitNode: (node, ctx) => {
+        const source = ctx.source;
+        if (node.type === 'call') {
+            const fname = calleeName(node, source);
+            if (!fname)
+                return false;
+            // library(dplyr) / require(stats) / requireNamespace("jsonlite") —
+            // and source("helpers.R"), which references another file in the project.
+            if (IMPORT_FNS.has(fname) || fname === 'source') {
+                const mod = literalOrIdentifier(firstArgValue(node), source);
+                if (!mod)
+                    return true; // dynamic argument — nothing to record, still not a call edge
+                const imp = ctx.createNode('import', mod, node, {
+                    signature: (0, tree_sitter_helpers_1.getNodeText)(node, source).trim().slice(0, 100),
+                });
+                if (imp && ctx.nodeStack.length > 0) {
+                    const parentId = ctx.nodeStack[ctx.nodeStack.length - 1];
+                    if (parentId) {
+                        ctx.addUnresolvedReference({
+                            fromNodeId: parentId,
+                            referenceName: mod,
+                            referenceKind: 'imports',
+                            line: node.startPosition.row + 1,
+                            column: node.startPosition.column,
+                        });
+                    }
+                }
+                return true;
+            }
+            // setClass("Patient", …) / setRefClass("Account", …) / R6Class("Stack", …)
+            if (CLASS_FNS.has(fname)) {
+                const name = literalOrIdentifier(firstArgValue(node), source);
+                if (!name)
+                    return false;
+                const cls = ctx.createNode('class', name, node, {});
+                if (cls) {
+                    ctx.pushScope(cls.id);
+                    extractClassMembers(node, cls.id, ctx);
+                    ctx.popScope();
+                }
+                return true;
+            }
+            // setGeneric("describe", …) / setMethod("describe", "Patient", function(obj) …)
+            if (GENERIC_FNS.has(fname)) {
+                const name = literalOrIdentifier(firstArgValue(node), source);
+                if (!name)
+                    return false;
+                // The implementing function_definition, when present (setMethod always,
+                // setGeneric usually via the def= argument).
+                const args = (0, tree_sitter_helpers_1.getChildByField)(node, 'arguments');
+                let impl = null;
+                if (args) {
+                    for (let i = 0; i < args.namedChildCount; i++) {
+                        const v = args.namedChild(i)?.type === 'argument'
+                            ? (0, tree_sitter_helpers_1.getChildByField)(args.namedChild(i), 'value') : null;
+                        if (v?.type === 'function_definition') {
+                            impl = v;
+                            break;
+                        }
+                    }
+                }
+                const params = impl ? (0, tree_sitter_helpers_1.getChildByField)(impl, 'parameters') : null;
+                const fn = ctx.createNode('function', name, node, {
+                    signature: params ? (0, tree_sitter_helpers_1.getNodeText)(params, source) : undefined,
+                });
+                const body = impl ? (0, tree_sitter_helpers_1.getChildByField)(impl, 'body') : null;
+                if (fn && body) {
+                    ctx.pushScope(fn.id);
+                    ctx.visitNode(body); // hook-aware walk — see the function-assignment note below
+                    ctx.popScope();
+                }
+                return true;
+            }
+            return false; // ordinary call — generic extraction records the edge
+        }
+        if (node.type === 'binary_operator') {
+            const op = node.childForFieldName('operator')?.text;
+            if (!op)
+                return false;
+            const lhs = (0, tree_sitter_helpers_1.getChildByField)(node, 'lhs');
+            const rhs = (0, tree_sitter_helpers_1.getChildByField)(node, 'rhs');
+            // name <- function(…) / name = function(…)   (any scope — nested
+            // functions extract inside their enclosing function's scope). The body
+            // is walked through ctx.visitNode, NOT ctx.visitFunctionBody: the body
+            // walker doesn't consult this hook, and in R every nested definition is
+            // an assignment expression that only this hook can recognize. visitNode
+            // dispatches calls and the hook alike, with the function on the scope
+            // stack so attribution is right.
+            if (ASSIGN_LEFT.has(op) && lhs?.type === 'identifier' && rhs?.type === 'function_definition') {
+                const params = (0, tree_sitter_helpers_1.getChildByField)(rhs, 'parameters');
+                const fn = ctx.createNode('function', (0, tree_sitter_helpers_1.getNodeText)(lhs, source), node, {
+                    signature: params ? (0, tree_sitter_helpers_1.getNodeText)(params, source) : undefined,
+                });
+                const body = (0, tree_sitter_helpers_1.getChildByField)(rhs, 'body');
+                if (fn && body) {
+                    ctx.pushScope(fn.id);
+                    ctx.visitNode(body);
+                    ctx.popScope();
+                }
+                return true;
+            }
+            // Top-level value assignments → variable/constant. Locals are skipped
+            // deliberately (graph bloat); the initializer is still visited so its
+            // calls and nested definitions extract.
+            const topLevel = node.parent?.type === 'program';
+            if (topLevel && ASSIGN_LEFT.has(op) && lhs?.type === 'identifier' && rhs) {
+                // `Account <- setRefClass("Account", …)` is the CLASS definition idiom
+                // (same for R6Class / setClass / setGeneric) — the call hook makes the
+                // class/function node; a twin variable node would just be noise.
+                const rhsCallee = rhs.type === 'call' ? calleeName(rhs, source) : null;
+                if (!rhsCallee || (!CLASS_FNS.has(rhsCallee) && !GENERIC_FNS.has(rhsCallee))) {
+                    const name = (0, tree_sitter_helpers_1.getNodeText)(lhs, source);
+                    ctx.createNode(CONSTANT_NAME.test(name) ? 'constant' : 'variable', name, node, {});
+                }
+                ctx.visitNode(rhs);
+                return true;
+            }
+            // value -> name / value ->> name (right assign)
+            if (topLevel && ASSIGN_RIGHT.has(op) && rhs?.type === 'identifier' && lhs) {
+                const name = (0, tree_sitter_helpers_1.getNodeText)(rhs, source);
+                ctx.createNode(CONSTANT_NAME.test(name) ? 'constant' : 'variable', name, node, {});
+                ctx.visitNode(lhs);
+                return true;
+            }
+            return false;
+        }
+        return false;
+    },
+};
+//# sourceMappingURL=r.js.map

package/dist/extraction/languages/r.js.map

@@ -0,0 +1 @@
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package/dist/extraction/languages/ruby.d.ts

@@ -0,0 +1,3 @@
+import type { LanguageExtractor } from '../tree-sitter-types';
+export declare const rubyExtractor: LanguageExtractor;
+//# sourceMappingURL=ruby.d.ts.map

package/dist/extraction/languages/ruby.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"ruby.d.ts","sourceRoot":"","sources":["../../../src/extraction/languages/ruby.ts"],"names":[],"mappings":"AAEA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAE9D,eAAO,MAAM,aAAa,EAAE,iBA8I3B,CAAC"}

package/dist/extraction/languages/ruby.js

@@ -0,0 +1,149 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.rubyExtractor = void 0;
+const tree_sitter_helpers_1 = require("../tree-sitter-helpers");
+exports.rubyExtractor = {
+    functionTypes: ['method'],
+    classTypes: ['class'],
+    methodTypes: ['method', 'singleton_method'],
+    interfaceTypes: [], // Ruby uses modules (handled via visitNode hook)
+    structTypes: [],
+    enumTypes: [],
+    typeAliasTypes: [],
+    importTypes: ['call'], // require/require_relative
+    callTypes: ['call', 'method_call'],
+    variableTypes: ['assignment'], // Ruby uses assignment like Python
+    nameField: 'name',
+    bodyField: 'body',
+    paramsField: 'parameters',
+    visitNode: (node, ctx) => {
+        // Ruby mixins: `include Mod`, `extend Mod`, `prepend Mod[, Other]` — the
+        // primary composition mechanism (ActiveSupport concerns, Comparable, …).
+        // These parse as a bare `call` to `include`/`extend`/`prepend` with the
+        // module(s) as constant arguments, so without special handling they'd be
+        // mis-extracted as a call to a method named "include" and the module would
+        // record no dependent — even though it's mixed into a class. Emit an
+        // `implements` edge (enclosing class/module → mixed-in module), so editing a
+        // concern surfaces every class that includes it.
+        if (node.type === 'call' && !node.childForFieldName('receiver')) {
+            const method = node.childForFieldName('method');
+            const mname = method?.text;
+            if (mname === 'include' || mname === 'extend' || mname === 'prepend') {
+                const parentId = ctx.nodeStack.length > 0 ? ctx.nodeStack[ctx.nodeStack.length - 1] : undefined;
+                const args = node.childForFieldName('arguments')
+                    ?? node.namedChildren.find((c) => c.type === 'argument_list');
+                if (parentId && args) {
+                    for (let i = 0; i < args.namedChildCount; i++) {
+                        const arg = args.namedChild(i);
+                        // `Mod` is `constant`, `Foo::Bar` is `scope_resolution`. Skip
+                        // `extend self` / dynamic args (`include foo()`).
+                        if (arg && (arg.type === 'constant' || arg.type === 'scope_resolution')) {
+                            ctx.addUnresolvedReference({
+                                fromNodeId: parentId,
+                                referenceName: (0, tree_sitter_helpers_1.getNodeText)(arg, ctx.source),
+                                referenceKind: 'implements',
+                                filePath: ctx.filePath,
+                                line: node.startPosition.row + 1,
+                                column: node.startPosition.column,
+                            });
+                        }
+                    }
+                    return true; // handled — don't also extract as a call to "include"
+                }
+            }
+        }
+        if (node.type !== 'module')
+            return false;
+        const nameNode = node.childForFieldName('name');
+        if (!nameNode)
+            return false;
+        const name = nameNode.text;
+        const moduleNode = ctx.createNode('module', name, node);
+        if (!moduleNode)
+            return false;
+        // Push module onto scope stack so children get proper qualified names
+        ctx.pushScope(moduleNode.id);
+        const body = node.childForFieldName('body');
+        if (body) {
+            for (let i = 0; i < body.namedChildCount; i++) {
+                const child = body.namedChild(i);
+                if (child)
+                    ctx.visitNode(child);
+            }
+        }
+        ctx.popScope();
+        return true; // handled
+    },
+    extractBareCall: (node, _source) => {
+        // Ruby bare method calls (no parens, no receiver) parse as plain identifiers.
+        // e.g., `reset` in a method body is `identifier "reset"` not a `call` node.
+        if (node.type !== 'identifier')
+            return undefined;
+        const parent = node.parent;
+        if (!parent)
+            return undefined;
+        // Only statement-level identifiers — direct children of block/body nodes
+        const BLOCK_PARENTS = new Set([
+            'body_statement', 'then', 'else', 'do', 'begin',
+            'rescue', 'ensure', 'when',
+        ]);
+        if (!BLOCK_PARENTS.has(parent.type))
+            return undefined;
+        const name = node.text;
+        // Skip Ruby keywords/literals
+        const SKIP = new Set([
+            'true', 'false', 'nil', 'self', 'super',
+            '__FILE__', '__LINE__', '__dir__',
+        ]);
+        if (SKIP.has(name))
+            return undefined;
+        // Skip constants (uppercase start) — these are class/module refs, not calls
+        if (name.length > 0 && name.charCodeAt(0) >= 65 && name.charCodeAt(0) <= 90)
+            return undefined;
+        return name;
+    },
+    getVisibility: (node) => {
+        // Ruby visibility is based on preceding visibility modifiers
+        let sibling = node.previousNamedSibling;
+        while (sibling) {
+            if (sibling.type === 'call') {
+                const methodName = (0, tree_sitter_helpers_1.getChildByField)(sibling, 'method');
+                if (methodName) {
+                    const text = methodName.text;
+                    if (text === 'private')
+                        return 'private';
+                    if (text === 'protected')
+                        return 'protected';
+                    if (text === 'public')
+                        return 'public';
+                }
+            }
+            sibling = sibling.previousNamedSibling;
+        }
+        return 'public';
+    },
+    extractImport: (node, source) => {
+        const importText = source.substring(node.startIndex, node.endIndex).trim();
+        // Check if this is a require/require_relative call
+        const identifier = node.namedChildren.find((c) => c.type === 'identifier');
+        if (!identifier)
+            return null;
+        const methodName = (0, tree_sitter_helpers_1.getNodeText)(identifier, source);
+        if (methodName !== 'require' && methodName !== 'require_relative') {
+            return null; // Not an import, skip
+        }
+        // Find the argument (string)
+        const argList = node.namedChildren.find((c) => c.type === 'argument_list');
+        if (argList) {
+            const stringNode = argList.namedChildren.find((c) => c.type === 'string');
+            if (stringNode) {
+                const stringContent = stringNode.namedChildren.find((c) => c.type === 'string_content');
+                if (stringContent) {
+                    return { moduleName: (0, tree_sitter_helpers_1.getNodeText)(stringContent, source), signature: importText };
+                }
+            }
+        }
+        return null;
+    },
+};
+//# sourceMappingURL=ruby.js.map

package/dist/extraction/languages/ruby.js.map

@@ -0,0 +1 @@
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package/dist/extraction/languages/rust.d.ts

@@ -0,0 +1,23 @@
+import type { Node as SyntaxNode } from 'web-tree-sitter';
+import type { LanguageExtractor } from '../tree-sitter-types';
+/**
+ * The implementing type's simple name for an `impl` block, read from the
+ * grammar's `type` field (#1588). Mirrored byte-for-byte by the native
+ * kernel's `impl_type_name` (codegraph-kernel/src/rustlang.rs) — change both.
+ *
+ * `impl<T> Source for BufSource<T>`, `impl<'a> Iterator for Parents<'a>`,
+ * `impl Trait for &Foo`, `impl Trait for m::Foo` all yield the implementing
+ * TYPE (`BufSource`, `Parents`, `Foo`, `Foo`). The previous rule took the last
+ * bare `type_identifier` child of the `impl_item`; once the implementing type
+ * carries parameters it parses as a `generic_type`, so the only bare
+ * identifier left was the TRAIT's — every parameterized impl's methods were
+ * qualified by the trait (`Source::read`), unaddressable by their type and
+ * colliding with the trait's own declaration.
+ *
+ * Shapes that name no single type (tuples, `dyn Trait`, pointers, primitives,
+ * function types…) yield undefined: no receiver, and the fn is extracted
+ * exactly as before.
+ */
+export declare function rustImplTypeName(typeNode: SyntaxNode | null, source: string): string | undefined;
+export declare const rustExtractor: LanguageExtractor;
+//# sourceMappingURL=rust.d.ts.map

package/dist/extraction/languages/rust.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"rust.d.ts","sourceRoot":"","sources":["../../../src/extraction/languages/rust.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,IAAI,IAAI,UAAU,EAAE,MAAM,iBAAiB,CAAC;AAE1D,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,sBAAsB,CAAC;AAgC9D;;;;;;;;;;;;;;;;;GAiBG;AACH,wBAAgB,gBAAgB,CAAC,QAAQ,EAAE,UAAU,GAAG,IAAI,EAAE,MAAM,EAAE,MAAM,GAAG,MAAM,GAAG,SAAS,CAmBhG;AAED,eAAO,MAAM,aAAa,EAAE,iBAoG3B,CAAC"}