@lsbjordao/type-taxon-script 1.0.7 → 1.0.9

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Files changed (4) hide show
  1. package/dist/export.js +2 -2
  2. package/dist/exportToCsv.js +268 -0
  3. package/dist/tts.js +22 -1
  4. package/package.json +11 -9
package/dist/export.js CHANGED
@@ -121,7 +121,7 @@ console.log(jsonData)
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  }
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  deleteJSFiles(`./taxon/${genus}`).then(() => {
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  const filePath = './output/';
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- console.log(`\x1b[1m\x1b[32m✔ Database exported: \x1b[33m${filePath}${genus}DB.json\x1b[0m\x1b[1m\x1b[32m\x1b[0m`);
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+ console.log(`\x1b[1m\x1b[32m✔ JSON database exported: \x1b[33m${filePath}${genus}DB.json\x1b[0m\x1b[1m\x1b[32m\x1b[0m`);
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  spinner.stop();
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  try {
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  fs_1.default.unlinkSync(`./temp/${fileToTranspile}.js`);
@@ -213,7 +213,7 @@ console.log(jsonData)
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  }
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  deleteJSFiles(`./taxon/${genus}`).then(() => {
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  const filePath = './output/';
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- console.log(`\x1b[1m\x1b[32m✔ Database exported: \x1b[33m${filePath}${genus}DB.json\x1b[0m\x1b[1m\x1b[32m\x1b[0m`);
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+ console.log(`\x1b[1m\x1b[32m✔ JSON database exported: \x1b[33m${filePath}${genus}DB.json\x1b[0m\x1b[1m\x1b[32m\x1b[0m`);
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  spinner.stop();
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  try {
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  fs_1.default.unlinkSync(`./temp/${fileToTranspile}.js`);
package/dist/exportToCsv.js ADDED
@@ -0,0 +1,268 @@
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+ "use strict";
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+ var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
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+ function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
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+ return new (P || (P = Promise))(function (resolve, reject) {
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+ function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
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+ function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
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+ function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
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+ step((generator = generator.apply(thisArg, _arguments || [])).next());
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+ });
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+ };
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+ var __importDefault = (this && this.__importDefault) || function (mod) {
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+ return (mod && mod.__esModule) ? mod : { "default": mod };
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+ };
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+ Object.defineProperty(exports, "__esModule", { value: true });
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+ const fs_1 = __importDefault(require("fs"));
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+ const path_1 = __importDefault(require("path"));
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+ const child_process_1 = require("child_process");
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+ const csv_parser_1 = __importDefault(require("csv-parser"));
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+ const plainjs_1 = require("@json2csv/plainjs");
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+ const transforms_1 = require("@json2csv/transforms");
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+ const cli_spinner_1 = require("cli-spinner");
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+ function deleteJSFiles(folderPath) {
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+ return __awaiter(this, void 0, void 0, function* () {
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+ try {
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+ const files = yield fs_1.default.promises.readdir(folderPath);
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+ for (const file of files) {
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+ if (file.endsWith('.js')) {
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+ yield fs_1.default.promises.unlink(`${folderPath}/${file}`);
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+ }
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+ }
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+ }
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+ catch (err) {
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+ console.error('Error deleting files:', err);
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+ }
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+ });
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+ }
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+ function ttsExportToCsv(genus, load) {
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+ return __awaiter(this, void 0, void 0, function* () {
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+ if (genus === '') {
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+ console.error('\x1b[31m✖ Argument `--genus` cannot be empty.\x1b[0m');
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+ return;
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+ }
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+ if (!fs_1.default.existsSync('./input') && !fs_1.default.existsSync('./output')) {
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+ console.error("\x1b[31m✖ The ./input and ./output directories are not present within the project.\x1b[0m\n\x1b[33mℹ️ Please run `tts init` before attempting to export a database.\x1b[0m");
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+ return;
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+ }
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+ const spinner = new cli_spinner_1.Spinner('\x1b[36mProcessing... %s\x1b[0m');
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+ spinner.setSpinnerString('|/-\\'); // spinner sequence
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+ spinner.start();
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+ const taxa = [];
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+ fs_1.default.mkdirSync('./temp', { recursive: true });
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+ if (load === 'all') {
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+ const directoryPath = `./taxon/${genus}/`;
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+ fs_1.default.readdir(directoryPath, (err, files) => {
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+ if (err) {
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+ spinner.stop();
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+ console.error('Error reading directory:', err);
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+ process.exit();
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+ }
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+ const taxa = files
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+ .filter(file => file.endsWith('.ts') && file !== 'index.ts')
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+ .map(file => path_1.default.parse(file).name);
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+ const importStatements = taxa.map((species) => {
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+ return `import { ${species.replace(/\s/g, '_').replace(/\-([a-z])/, (_, match) => match.toUpperCase())} } from '../taxon/${genus}/${species.replace(/\s/g, '_')}'`;
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+ }).join('\n');
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+ const speciesCall = taxa.map((species) => {
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+ return ` ${species.replace(/\s/g, '_').replace(/\-([a-z])/, (_, match) => match.toUpperCase())},`;
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+ }).join('\n');
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+ const fileContent = `// Import genus ${genus}
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+ import { ${genus} } from '../taxon/${genus}'
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+
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+ // Import species of ${genus}
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+ ${importStatements}
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+
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+ const ${genus}_species: ${genus}[] = [
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+ ${speciesCall}
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+ ]
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+
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+ // Export ${genus}DB.json
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+ //import { writeFileSync } from 'fs'
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+ const jsonData = JSON.stringify(${genus}_species);
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+ console.log(jsonData)
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+ //const inputFilePath = '../output/${genus}DB.json'
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+ //writeFileSync(inputFilePath, jsonData, 'utf-8')
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+ //console.log('\\x1b[1m\\x1b[32m✔ Process finished.\\x1b[0m')`;
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+ const tempFilePath = './temp/exportTemp.ts';
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+ fs_1.default.writeFileSync(tempFilePath, fileContent, 'utf-8');
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+ const fileToTranspile = 'exportTemp';
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+ (0, child_process_1.exec)(`tsc ./temp/${fileToTranspile}.ts`, (error, stdout, stderr) => {
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+ if (stdout) {
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+ spinner.stop();
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+ console.error('\x1b[31m✖ TS Error:\x1b[0m\n\n' + `${stdout}`);
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+ process.exit();
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+ }
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+ if (stderr) {
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+ spinner.stop();
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+ console.error('\x1b[31m✖ TS Error:\x1b[0m\n\n' + `${stderr}`);
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+ process.exit();
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+ }
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+ try {
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+ fs_1.default.unlinkSync(`./temp/${fileToTranspile}.ts`);
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+ }
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+ catch (err) {
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+ spinner.stop();
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+ console.error(`An error occurred while deleting the file: ${err}`);
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+ process.exit();
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+ }
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+ (0, child_process_1.exec)(`node ./temp/${fileToTranspile}.js > ./output/${genus}DB.json`, (error, stdout, stderr) => {
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+ // if (error) {
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+ // spinner.stop()
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+ // console.error('\x1b[31m✖ JS execution time error:\x1b[0m\n\n' + `${error.message}`)
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+ // process.exit()
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+ // }
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+ if (stdout) {
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+ spinner.stop();
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+ console.error('\x1b[31m✖ JS execution time error:\x1b[0m\n\n' + `${stdout}`);
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+ process.exit();
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+ }
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+ if (stderr) {
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+ spinner.stop();
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+ console.error('\x1b[31m✖ JS execution time error:\x1b[0m\n\n' + `${stderr}`);
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+ process.exit();
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+ }
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+ deleteJSFiles(`./taxon/${genus}`).then(() => {
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+ const filePath = './output/';
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+ try {
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+ const data = fs_1.default.readFileSync(`./output/${genus}DB.json`, 'utf8');
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+ const opts = {
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+ transforms: [
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+ (0, transforms_1.flatten)({ separator: '.' })
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+ ]
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+ };
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+ const parser = new plainjs_1.Parser(opts);
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+ const csv = parser.parse(JSON.parse(data));
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+ fs_1.default.writeFileSync(`./output/${genus}DB.csv`, csv);
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+ }
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+ catch (err) {
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+ console.error('Error reading the file:', err);
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+ }
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+ console.log(`\x1b[1m\x1b[32m✔ CSV database exported: \x1b[33m${filePath}${genus}DB.csv\x1b[0m\x1b[1m\x1b[32m\x1b[0m`);
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+ spinner.stop();
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+ try {
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+ fs_1.default.unlinkSync(`./temp/${fileToTranspile}.js`);
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+ fs_1.default.rm('./temp', { recursive: true }, (err) => {
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+ if (err) {
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+ console.error('Error deleting directory:', err);
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+ process.exit();
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+ }
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+ });
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+ }
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+ catch (err) {
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+ console.error(`An error occurred while deleting the file: ${err}`);
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+ process.exit();
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+ }
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+ });
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+ });
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+ });
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+ });
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+ }
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+ if (load === 'csv') {
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+ const inputFilePath = './input/taxaToExport.csv';
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+ const tempFilePath = './temp/exportTemp.ts';
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+ fs_1.default.createReadStream(inputFilePath)
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+ .pipe((0, csv_parser_1.default)({ headers: false }))
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+ .on('data', (data) => {
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+ taxa.push(data['0']);
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+ })
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+ .on('end', () => __awaiter(this, void 0, void 0, function* () {
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+ const importStatements = taxa.map((species) => {
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+ return `import { ${species.replace(/\s/g, '_').replace(/\-([a-z])/, (_, match) => match.toUpperCase())} } from '../taxon/${genus}/${species.replace(/\s/g, '_')}'`;
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+ }).join('\n');
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+ const speciesCall = taxa.map((species) => {
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+ return ` ${species.replace(/\s/g, '_').replace(/\-([a-z])/, (_, match) => match.toUpperCase())},`;
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+ }).join('\n');
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+ const fileContent = `// Import genus ${genus}
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+ import { ${genus} } from '../taxon/${genus}'
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+
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+ // Import species of ${genus}
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+ ${importStatements}
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+
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+ const ${genus}_species: ${genus}[] = [
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+ ${speciesCall}
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+ ]
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+
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+ // Export ${genus}DB.json
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+ const jsonData = JSON.stringify(${genus}_species);
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+ console.log(jsonData)
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+ // import { writeFileSync } from 'fs'
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+ // const jsonData = JSON.stringify(${genus}_species)
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+ // const inputFilePath = '../output/${genus}DB.json'
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+ // writeFileSync(inputFilePath, jsonData, 'utf-8')
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+ // console.log('\\x1b[1m\\x1b[32m✔ Process finished.\\x1b[0m')`;
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+ fs_1.default.writeFileSync(tempFilePath, fileContent, 'utf-8');
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+ const fileToTranspile = 'exportTemp';
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+ (0, child_process_1.exec)(`tsc ./temp/${fileToTranspile}.ts`, (error, stdout, stderr) => {
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+ if (stdout) {
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+ spinner.stop();
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+ console.error('\x1b[31m✖ TS Error:\x1b[0m\n\n' + `${stdout}`);
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+ process.exit();
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+ }
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+ if (stderr) {
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+ spinner.stop();
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+ console.error('\x1b[31m✖ TS Error:\x1b[0m\n\n' + `${stdout}`);
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+ process.exit();
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+ }
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+ try {
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+ fs_1.default.unlinkSync(`./temp/${fileToTranspile}.ts`);
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+ }
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+ catch (err) {
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+ spinner.stop();
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+ console.error(`An error occurred while deleting the file: ${err}`);
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+ process.exit();
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+ }
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+ (0, child_process_1.exec)(`node ./temp/${fileToTranspile}.js > ./output/${genus}DB.json`, (error, stdout, stderr) => {
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+ // if (error) {
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+ // spinner.stop()
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+ // console.error('\x1b[31m✖ JS execution time error:\x1b[0m\n\n' + `${error.message}`)
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+ // process.exit()
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+ // }
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+ if (stdout) {
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+ spinner.stop();
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+ console.error('\x1b[31m✖ JS execution time error:\x1b[0m\n\n' + `${stdout}`);
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+ process.exit();
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+ }
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+ if (stderr) {
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+ spinner.stop();
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+ console.error('\x1b[31m✖ JS execution time error:\x1b[0m\n\n' + `${stderr}`);
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+ process.exit();
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+ }
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+ deleteJSFiles(`./taxon/${genus}`).then(() => {
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+ const filePath = './output/';
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+ try {
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+ const data = fs_1.default.readFileSync(`./output/${genus}DB.json`, 'utf8');
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+ const opts = {
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+ transforms: [
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+ (0, transforms_1.flatten)({ separator: '.' })
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+ ]
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+ };
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+ const parser = new plainjs_1.Parser(opts);
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+ const csv = parser.parse(JSON.parse(data));
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+ fs_1.default.writeFileSync(`./output/${genus}DB.csv`, csv);
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+ }
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+ catch (err) {
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+ console.error('Error reading the file:', err);
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+ }
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+ console.log(`\x1b[1m\x1b[32m✔ CSV database exported: \x1b[33m${filePath}${genus}DB.csv\x1b[0m\x1b[1m\x1b[32m\x1b[0m`);
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+ spinner.stop();
248
+ try {
249
+ fs_1.default.unlinkSync(`./temp/${fileToTranspile}.js`);
250
+ fs_1.default.rm('./temp', { recursive: true }, (err) => {
251
+ if (err) {
252
+ console.error('Error deleting directory:', err);
253
+ process.exit();
254
+ }
255
+ });
256
+ }
257
+ catch (err) {
258
+ console.error(`An error occurred while deleting the file: ${err}`);
259
+ process.exit();
260
+ }
261
+ });
262
+ });
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+ });
264
+ }));
265
+ }
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+ });
267
+ }
268
+ exports.default = ttsExportToCsv;
package/dist/tts.js CHANGED
@@ -52,7 +52,7 @@ yargs_1.default.command({
52
52
  });
53
53
  yargs_1.default.command({
54
54
  command: 'export',
55
- describe: 'Export database',
55
+ describe: 'Export a JSON database',
56
56
  builder: {
57
57
  genus: {
58
58
  describe: 'Genus name',
@@ -85,6 +85,27 @@ yargs_1.default.command({
85
85
  (0, exportSources_1.default)(argv.genus);
86
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  },
87
87
  });
88
+ yargs_1.default.command({
89
+ command: 'exportToCsv',
90
+ describe: 'Export a CSV database',
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+ builder: {
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+ genus: {
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+ describe: 'Genus name',
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+ demandOption: true,
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+ type: 'string',
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+ },
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+ load: {
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+ describe: 'Load a list of taxa to export from the csv file: "./input/taxaToExport.csv".',
99
+ demandOption: false,
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+ type: 'string',
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+ choices: ['all', 'csv'],
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+ default: 'all'
103
+ }
104
+ },
105
+ handler: (argv) => {
106
+ (0, export_1.default)(argv.genus, argv.load);
107
+ },
108
+ });
88
109
  yargs_1.default.command({
89
110
  command: 'findProperty',
90
111
  describe: 'Find a property',
package/package.json CHANGED
@@ -1,24 +1,26 @@
1
1
  {
2
2
  "name": "@lsbjordao/type-taxon-script",
3
- "version": "1.0.7",
3
+ "version": "1.0.9",
4
4
  "author": "Lucas Jordão <tucarj@gmail.com> & André Eppinghaus <andreeppinghaus@gmail.com> & Vicente Calfo <vicentecalfo@gmail.com>",
5
5
  "license": "ISC",
6
6
  "description": "TypeTaxonScript",
7
7
  "dependencies": {
8
+ "@json2csv/plainjs": "^7.0.5",
9
+ "@json2csv/transforms": "^7.0.5",
10
+ "cli-spinner": "^0.2.10",
11
+ "csv-parser": "^3.0.0",
8
12
  "fs": "^0.0.1-security",
9
- "mustache": "^4.2.0",
10
13
  "lodash": "^4.17.21",
11
- "yargs": "^17.7.2",
12
- "csv-parser": "^3.0.0",
13
- "cli-spinner": "^0.2.10"
14
+ "mustache": "^4.2.0",
15
+ "yargs": "^17.7.2"
14
16
  },
15
17
  "devDependencies": {
16
- "typescript": "^5.1.5",
18
+ "@types/cli-spinner": "^0.2.3",
19
+ "@types/lodash": "^4.14.202",
20
+ "@types/mustache": "^4.2.5",
17
21
  "@types/node": "^20.4.10",
18
22
  "@types/yargs": "^17.0.32",
19
- "@types/mustache": "^4.2.5",
20
- "@types/lodash": "^4.14.202",
21
- "@types/cli-spinner": "^0.2.3"
23
+ "typescript": "^5.1.5"
22
24
  },
23
25
  "main": "dist/tts.js",
24
26
  "files": [