@loaders.gl/parquet 4.4.5 → 5.0.0-alpha.2

package/dist/parquetjs/parser/decoders.js.map

@@ -1 +1 @@
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package/dist/parquetjs/parser/parquet-reader.d.ts

@@ -2,14 +2,29 @@ import type { ReadableFile } from '@loaders.gl/loader-utils';
 import { ParquetSchema } from "../schema/schema.js";
 import { ColumnChunk, FileMetaData, RowGroup } from "../parquet-thrift/index.js";
 import { ParquetRowGroup, ParquetColumnChunk, ParquetReaderContext } from "../schema/declare.js";
+import type { ParquetDataPageLocation, ParquetPageLocations, ParquetRowRange } from "../../lib/parquet-page-index.js";
 export type ParquetReaderProps = {
+    /** Maximum dictionary-page read size. */
     defaultDictionarySize?: number;
+    /** Preserve BYTE_ARRAY values instead of decoding them as strings. */
     preserveBinary?: boolean;
+    /** Retain byte arrays as views into decoded page buffers for direct materialization. */
+    retainByteArrayViews?: boolean;
+    /** Decode supported primitive columns into typed buffers instead of boxed JavaScript arrays. */
+    useTypedValueBuffers?: boolean;
+    /** Decode repetition and definition levels into compact unsigned typed arrays. */
+    useTypedLevelBuffers?: boolean;
+    /** Abort signal forwarded to every underlying random-access read. */
+    signal?: AbortSignal;
 };
 /** Properties for initializing a ParquetRowGroupReader */
 export type ParquetIterationProps = {
     /** Filter allowing some columns to be dropped */
     columnList?: string[] | string[][];
+    /** Zero-based row-group indexes to read, in output order. */
+    rowGroups?: number[];
+    /** Abort signal forwarded to row-group and column-chunk reads. */
+    signal?: AbortSignal;
 };
 /**
  * The parquet envelope reader allows direct, unbuffered access to the individual
@@ -18,10 +33,16 @@ export type ParquetIterationProps = {
  * rows from a parquet file use the ParquetReader instead
  */
 export declare class ParquetReader {
-    static defaultProps: Required<ParquetReaderProps>;
-    props: Required<ParquetReaderProps>;
+    static defaultProps: Required<Omit<ParquetReaderProps, 'signal'>> & {
+        signal?: AbortSignal;
+    };
+    props: Required<Omit<ParquetReaderProps, 'signal'>> & {
+        signal?: AbortSignal;
+    };
     file: ReadableFile;
     metadata: Promise<FileMetaData> | null;
+    /** Parsed Parquet schema shared by metadata, iteration, and materialization paths. */
+    private schema;
     constructor(file: ReadableFile, props?: ParquetReaderProps);
     close(): void;
     /** Yield one row at a time */
@@ -30,24 +51,28 @@ export declare class ParquetReader {
     rowBatchIterator(props?: ParquetIterationProps): AsyncGenerator<import("../schema/declare").ParquetRow[], void, unknown>;
     /** Iterate over the raw row groups */
     rowGroupIterator(props?: ParquetIterationProps): AsyncGenerator<ParquetRowGroup, void, unknown>;
-    getRowCount(): Promise<number>;
-    getSchema(): Promise<ParquetSchema>;
+    getRowCount(signal?: AbortSignal): Promise<number>;
+    getSchema(signal?: AbortSignal): Promise<ParquetSchema>;
     /**
      * Returns the user (key/value) metadata for this file
      * In parquet this is not stored on the schema like it is in arrow
      */
     getSchemaMetadata(): Promise<Record<string, string>>;
-    getFileMetadata(): Promise<FileMetaData>;
+    getFileMetadata(signal?: AbortSignal): Promise<FileMetaData>;
     /** Metadata is stored in the footer */
-    readHeader(): Promise<void>;
+    readHeader(signal?: AbortSignal): Promise<void>;
     /** Metadata is stored in the footer */
-    readFooter(): Promise<FileMetaData>;
+    readFooter(signal?: AbortSignal): Promise<FileMetaData>;
     /** Data is stored in row groups (similar to Apache Arrow record batches) */
-    readRowGroup(schema: ParquetSchema, rowGroup: RowGroup, columnList: string[][]): Promise<ParquetRowGroup>;
+    readRowGroup(schema: ParquetSchema, rowGroup: RowGroup, columnList: string[][], signal?: AbortSignal): Promise<ParquetRowGroup>;
+    /** Reads independently materializable flat columns for one logical row range using page indexes. */
+    readRowGroupRange(schema: ParquetSchema, rowGroup: RowGroup, columnList: string[][], rowRange: ParquetRowRange, pageLocations: ParquetPageLocations, signal?: AbortSignal): Promise<ParquetRowGroup>;
     /**
      * Each row group contains column chunks for all the columns.
      */
-    readColumnChunk(schema: ParquetSchema, colChunk: ColumnChunk): Promise<ParquetColumnChunk>;
+    readColumnChunk(schema: ParquetSchema, colChunk: ColumnChunk, signal?: AbortSignal): Promise<ParquetColumnChunk>;
+    /** Reads and decodes only the contiguous data pages overlapping one flat-column row range. */
+    readColumnChunkRange(schema: ParquetSchema, columnChunk: ColumnChunk, rowRange: ParquetRowRange, pages: readonly ParquetDataPageLocation[], signal?: AbortSignal): Promise<ParquetColumnChunk>;
     /**
      * Getting dictionary for allows to flatten values by indices.
      * @param dictionaryPageOffset
@@ -55,6 +80,6 @@ export declare class ParquetReader {
      * @param pagesOffset
      * @returns
      */
-    getDictionary(dictionaryPageOffset: number, context: ParquetReaderContext, pagesOffset: number): Promise<string[]>;
+    getDictionary(dictionaryPageOffset: number, context: ParquetReaderContext, pagesOffset: number, signal?: AbortSignal): Promise<any[]>;
 }
 //# sourceMappingURL=parquet-reader.d.ts.map

package/dist/parquetjs/parser/parquet-reader.d.ts.map

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package/dist/parquetjs/parser/parquet-reader.js

@@ -9,6 +9,10 @@ import { materializeRows } from "../schema/shred.js";
 import { PARQUET_MAGIC, PARQUET_MAGIC_ENCRYPTED } from "../../lib/constants.js";
 import { CompressionCodec, Type } from "../parquet-thrift/index.js";
 import { decodeFileMetadata, getThriftEnum, fieldIndexOf } from "../utils/read-utils.js";
+import { decodeString, readUInt32LE, toUint8Array } from "../utils/binary-utils.js";
+import { CompactInt64 } from "../utils/uint8-array-compact-protocol.js";
+/** Bounds concurrent range requests when a row group contains unusually many selected columns. */
+const MAXIMUM_CONCURRENT_COLUMN_READS = 16;
 /**
  * The parquet envelope reader allows direct, unbuffered access to the individual
  * sections of the parquet file, namely the header, footer and the row groups.
@@ -19,11 +23,17 @@ export class ParquetReader {
     static defaultProps = {
         // max ArrayBuffer size in js is 2Gb
         defaultDictionarySize: 2147483648,
-        preserveBinary: false
+        preserveBinary: false,
+        retainByteArrayViews: false,
+        useTypedValueBuffers: false,
+        useTypedLevelBuffers: false,
+        signal: undefined
     };
     props;
     file;
     metadata = null;
+    /** Parsed Parquet schema shared by metadata, iteration, and materialization paths. */
+    schema = null;
     constructor(file, props) {
         this.file = file;
         this.props = { ...ParquetReader.defaultProps, ...props };
@@ -52,25 +62,30 @@ export class ParquetReader {
     /** Iterate over the raw row groups */
     async *rowGroupIterator(props) {
         // Ensure strings are nested in arrays
-        const columnList = (props?.columnList || []).map((x) => Array.isArray(x) ? x : [x]);
-        const metadata = await this.getFileMetadata();
-        const schema = await this.getSchema();
+        const columnList = (props?.columnList || []).map(x => (Array.isArray(x) ? x : [x]));
+        const metadata = await this.getFileMetadata(props?.signal);
+        const schema = await this.getSchema(props?.signal);
         const rowGroupCount = metadata?.row_groups.length || 0;
-        for (let rowGroupIndex = 0; rowGroupIndex < rowGroupCount; rowGroupIndex++) {
-            const rowGroup = await this.readRowGroup(schema, metadata.row_groups[rowGroupIndex], columnList);
+        const rowGroupIndices = props?.rowGroups || Array.from({ length: rowGroupCount }, (_, index) => index);
+        for (const rowGroupIndex of rowGroupIndices) {
+            if (!Number.isInteger(rowGroupIndex) || rowGroupIndex < 0 || rowGroupIndex >= rowGroupCount) {
+                throw new Error(`Invalid Parquet row-group index ${rowGroupIndex}`);
+            }
+            const rowGroup = await this.readRowGroup(schema, metadata.row_groups[rowGroupIndex], columnList, props?.signal);
             yield rowGroup;
         }
     }
-    async getRowCount() {
-        const metadata = await this.getFileMetadata();
+    async getRowCount(signal) {
+        const metadata = await this.getFileMetadata(signal);
         return Number(metadata.num_rows);
     }
-    async getSchema() {
-        const metadata = await this.getFileMetadata();
-        const root = metadata.schema[0];
-        const { schema: schemaDefinition } = decodeSchema(metadata.schema, 1, root.num_children);
-        const schema = new ParquetSchema(schemaDefinition);
-        return schema;
+    async getSchema(signal) {
+        this.schema ||= this.getFileMetadata(signal).then(metadata => {
+            const root = metadata.schema[0];
+            const { schema: schemaDefinition } = decodeSchema(metadata.schema, 1, root.num_children);
+            return new ParquetSchema(schemaDefinition);
+        });
+        return await this.schema;
     }
     /**
      * Returns the user (key/value) metadata for this file
@@ -84,19 +99,18 @@ export class ParquetReader {
         }
         return md;
     }
-    async getFileMetadata() {
+    async getFileMetadata(signal) {
         if (!this.metadata) {
-            await this.readHeader();
-            this.metadata = this.readFooter();
+            await this.readHeader(signal);
+            this.metadata = this.readFooter(signal);
         }
         return this.metadata;
     }
     // LOW LEVEL METHODS
     /** Metadata is stored in the footer */
-    async readHeader() {
-        const arrayBuffer = await this.file.read(0, PARQUET_MAGIC.length);
-        const buffer = Buffer.from(arrayBuffer);
-        const magic = buffer.toString();
+    async readHeader(signal) {
+        const arrayBuffer = await this.file.read(0, PARQUET_MAGIC.length, signal ?? this.props.signal);
+        const magic = decodeString(toUint8Array(arrayBuffer));
         switch (magic) {
             case PARQUET_MAGIC:
                 break;
@@ -107,46 +121,70 @@ export class ParquetReader {
         }
     }
     /** Metadata is stored in the footer */
-    async readFooter() {
+    async readFooter(signal) {
         const trailerLen = PARQUET_MAGIC.length + 4;
-        const arrayBuffer = await this.file.read(this.file.size - trailerLen, trailerLen);
-        const trailerBuf = Buffer.from(arrayBuffer);
-        const magic = trailerBuf.slice(4).toString();
+        const arrayBuffer = await this.file.read(this.file.size - trailerLen, trailerLen, signal ?? this.props.signal);
+        const trailer = toUint8Array(arrayBuffer);
+        const magic = decodeString(trailer, 4);
         if (magic !== PARQUET_MAGIC) {
             throw new Error(`Not a valid parquet file (magic="${magic})`);
         }
-        const metadataSize = trailerBuf.readUInt32LE(0);
+        const metadataSize = readUInt32LE(trailer, 0);
         const metadataOffset = this.file.size - metadataSize - trailerLen;
         if (metadataOffset < PARQUET_MAGIC.length) {
             throw new Error(`Invalid metadata size ${metadataOffset}`);
         }
-        const arrayBuffer2 = await this.file.read(metadataOffset, metadataSize);
-        const metadataBuf = Buffer.from(arrayBuffer2);
+        const arrayBuffer2 = await this.file.read(metadataOffset, metadataSize, signal ?? this.props.signal);
+        const metadataBuf = toUint8Array(arrayBuffer2);
         // let metadata = new parquet_thrift.FileMetaData();
         // parquet_util.decodeThrift(metadata, metadataBuf);
         const { metadata } = decodeFileMetadata(metadataBuf);
         return metadata;
     }
     /** Data is stored in row groups (similar to Apache Arrow record batches) */
-    async readRowGroup(schema, rowGroup, columnList) {
-        const buffer = {
+    async readRowGroup(schema, rowGroup, columnList, signal) {
+        const selectedColumnChunks = rowGroup.columns.filter(columnChunk => {
+            const columnKey = columnChunk.meta_data?.path_in_schema;
+            return columnList.length === 0 || fieldIndexOf(columnList, columnKey) >= 0;
+        });
+        const columnEntries = [];
+        for (let batchStart = 0; batchStart < selectedColumnChunks.length; batchStart += MAXIMUM_CONCURRENT_COLUMN_READS) {
+            const columnBatch = selectedColumnChunks.slice(batchStart, batchStart + MAXIMUM_CONCURRENT_COLUMN_READS);
+            columnEntries.push(...(await Promise.all(columnBatch.map(async (columnChunk) => {
+                const columnKey = columnChunk.meta_data.path_in_schema.join();
+                const columnData = await this.readColumnChunk(schema, columnChunk, signal);
+                return [columnKey, columnData];
+            }))));
+        }
+        return {
             rowCount: Number(rowGroup.num_rows),
-            columnData: {}
+            columnData: Object.fromEntries(columnEntries)
         };
-        for (const colChunk of rowGroup.columns) {
-            const colMetadata = colChunk.meta_data;
-            const colKey = colMetadata?.path_in_schema;
-            if (columnList.length > 0 && fieldIndexOf(columnList, colKey) < 0) {
-                continue; // eslint-disable-line no-continue
+    }
+    /** Reads independently materializable flat columns for one logical row range using page indexes. */
+    async readRowGroupRange(schema, rowGroup, columnList, rowRange, pageLocations, signal) {
+        const selectedColumnChunks = rowGroup.columns.filter(columnChunk => {
+            const columnKey = columnChunk.meta_data?.path_in_schema;
+            return columnList.length === 0 || fieldIndexOf(columnList, columnKey) >= 0;
+        });
+        const columnEntries = await Promise.all(selectedColumnChunks.map(async (columnChunk) => {
+            const columnKey = columnChunk.meta_data.path_in_schema.join();
+            const pages = pageLocations[columnChunk.meta_data.path_in_schema.join('.')];
+            if (!pages) {
+                throw new Error(`Parquet offset index missing for ${columnKey}`);
             }
-            buffer.columnData[colKey.join()] = await this.readColumnChunk(schema, colChunk);
-        }
-        return buffer;
+            const columnData = await this.readColumnChunkRange(schema, columnChunk, rowRange, pages, signal);
+            return [columnKey, columnData];
+        }));
+        return {
+            rowCount: rowRange.end - rowRange.start,
+            columnData: Object.fromEntries(columnEntries)
+        };
     }
     /**
      * Each row group contains column chunks for all the columns.
      */
-    async readColumnChunk(schema, colChunk) {
+    async readColumnChunk(schema, colChunk, signal) {
         if (colChunk.file_path !== undefined && colChunk.file_path !== null) {
             throw new Error('external references are not supported');
         }
@@ -157,10 +195,17 @@ export class ParquetReader {
         }
         const compression = getThriftEnum(CompressionCodec, colChunk.meta_data?.codec);
         const pagesOffset = Number(colChunk.meta_data?.data_page_offset);
-        let pagesSize = Number(colChunk.meta_data?.total_compressed_size);
-        if (!colChunk.file_path) {
-            pagesSize = Math.min(this.file.size - pagesOffset, Number(colChunk.meta_data?.total_compressed_size));
-        }
+        const dictionaryPageOffset = colChunk.meta_data?.dictionary_page_offset;
+        const validDictionaryPageOffset = dictionaryPageOffset !== undefined && Number(dictionaryPageOffset) > 0
+            ? Number(dictionaryPageOffset)
+            : undefined;
+        const chunkOffset = Math.min(pagesOffset, validDictionaryPageOffset ?? pagesOffset);
+        const chunkEnd = chunkOffset + Number(colChunk.meta_data?.total_compressed_size);
+        const chunkSize = Math.min(this.file.size - chunkOffset, Math.max(0, chunkEnd - chunkOffset));
+        const arrayBuffer = await this.file.read(chunkOffset, chunkSize, signal ?? this.props.signal);
+        const chunkBuffer = toUint8Array(arrayBuffer);
+        const pagesRelativeOffset = pagesOffset - chunkOffset;
+        const pagesSize = Math.min(chunkBuffer.length - pagesRelativeOffset, Math.max(0, chunkEnd - pagesOffset));
         const context = {
             type,
             rLevelMax: field.rLevelMax,
@@ -170,20 +215,69 @@ export class ParquetReader {
             numValues: colChunk.meta_data?.num_values,
             dictionary: [],
             // Options - TBD is this the right place for these?
-            preserveBinary: this.props.preserveBinary
+            preserveBinary: this.props.preserveBinary,
+            retainByteArrayViews: this.props.retainByteArrayViews,
+            useTypedValueBuffers: this.props.useTypedValueBuffers,
+            useTypedLevelBuffers: this.props.useTypedLevelBuffers
         };
         let dictionary;
-        const dictionaryPageOffset = colChunk?.meta_data?.dictionary_page_offset;
-        if (dictionaryPageOffset) {
-            const dictionaryOffset = Number(dictionaryPageOffset);
-            // Getting dictionary from column chunk to iterate all over indexes to get dataPage values.
-            dictionary = await this.getDictionary(dictionaryOffset, context, pagesOffset);
+        if (validDictionaryPageOffset !== undefined) {
+            const dictionaryRelativeOffset = validDictionaryPageOffset - chunkOffset;
+            const dictionarySize = Math.min(Math.max(0, pagesOffset - validDictionaryPageOffset), chunkBuffer.length - dictionaryRelativeOffset, this.props.defaultDictionarySize);
+            const dictionaryBuffer = chunkBuffer.subarray(dictionaryRelativeOffset, dictionaryRelativeOffset + dictionarySize);
+            dictionary = await decodeDictionaryBuffer(dictionaryBuffer, context);
         }
         dictionary = context.dictionary?.length ? context.dictionary : dictionary;
-        const arrayBuffer = await this.file.read(pagesOffset, pagesSize);
-        const pagesBuf = Buffer.from(arrayBuffer);
+        const pagesBuf = chunkBuffer.subarray(pagesRelativeOffset, pagesRelativeOffset + pagesSize);
         return await decodeDataPages(pagesBuf, { ...context, dictionary });
     }
+    /** Reads and decodes only the contiguous data pages overlapping one flat-column row range. */
+    async readColumnChunkRange(schema, columnChunk, rowRange, pages, signal) {
+        if (columnChunk.file_path !== undefined && columnChunk.file_path !== null) {
+            throw new Error('external references are not supported');
+        }
+        const columnMetadata = columnChunk.meta_data;
+        const field = schema.findField(columnMetadata.path_in_schema);
+        if (field.path.length !== 1 || field.repetitionType === 'REPEATED' || field.rLevelMax !== 0) {
+            throw new Error('Selective Parquet page reads currently require flat primitive columns');
+        }
+        const type = getThriftEnum(Type, columnMetadata.type);
+        if (type !== field.primitiveType) {
+            throw new Error(`chunk type not matching schema: ${type}`);
+        }
+        const compression = getThriftEnum(CompressionCodec, columnMetadata.codec);
+        const overlappingPages = pages.filter(page => page.endRowIndex > rowRange.start && page.firstRowIndex < rowRange.end);
+        if (!overlappingPages.length) {
+            throw new Error('Parquet page plan does not overlap the requested row range');
+        }
+        const firstPage = overlappingPages[0];
+        const lastPage = overlappingPages[overlappingPages.length - 1];
+        const context = {
+            type,
+            rLevelMax: field.rLevelMax,
+            dLevelMax: field.dLevelMax,
+            compression,
+            column: field,
+            numValues: new CompactInt64(lastPage.endRowIndex - firstPage.firstRowIndex),
+            dictionary: [],
+            preserveBinary: this.props.preserveBinary,
+            retainByteArrayViews: this.props.retainByteArrayViews,
+            useTypedValueBuffers: this.props.useTypedValueBuffers
+        };
+        let dictionary;
+        const dictionaryPageOffset = Number(columnMetadata.dictionary_page_offset);
+        if (Number.isSafeInteger(dictionaryPageOffset) && dictionaryPageOffset > 0) {
+            const dictionaryLength = Math.max(0, pages[0].offset - dictionaryPageOffset);
+            const dictionaryBuffer = toUint8Array(await this.file.read(dictionaryPageOffset, dictionaryLength, signal ?? this.props.signal));
+            dictionary = await decodeDictionaryBuffer(dictionaryBuffer, context);
+        }
+        const dataLength = lastPage.offset + lastPage.compressedByteLength - firstPage.offset;
+        const dataBuffer = toUint8Array(await this.file.read(firstPage.offset, dataLength, signal ?? this.props.signal));
+        const decoded = await decodeDataPages(dataBuffer, { ...context, dictionary });
+        const relativeStart = rowRange.start - firstPage.firstRowIndex;
+        const relativeEnd = relativeStart + rowRange.end - rowRange.start;
+        return sliceFlatColumnChunk(decoded, field.dLevelMax, relativeStart, relativeEnd);
+    }
     /**
      * Getting dictionary for allows to flatten values by indices.
      * @param dictionaryPageOffset
@@ -191,7 +285,7 @@ export class ParquetReader {
      * @param pagesOffset
      * @returns
      */
-    async getDictionary(dictionaryPageOffset, context, pagesOffset) {
+    async getDictionary(dictionaryPageOffset, context, pagesOffset, signal) {
         if (dictionaryPageOffset === 0) {
             // dictionarySize = Math.min(this.fileSize - pagesOffset, this.defaultDictionarySize);
             // pagesBuf = await this.read(pagesOffset, dictionarySize);
@@ -201,12 +295,38 @@ export class ParquetReader {
             // Now if we use code commented above we don't get DICTIONARY_PAGE we get DATA_PAGE instead.
             return [];
         }
-        const dictionarySize = Math.min(this.file.size - dictionaryPageOffset, this.props.defaultDictionarySize);
-        const arrayBuffer = await this.file.read(dictionaryPageOffset, dictionarySize);
-        const pagesBuf = Buffer.from(arrayBuffer);
-        const cursor = { buffer: pagesBuf, offset: 0, size: pagesBuf.length };
-        const decodedPage = await decodePage(cursor, context);
-        return decodedPage.dictionary;
+        const dictionarySize = Math.min(Math.max(0, pagesOffset - dictionaryPageOffset), this.file.size - dictionaryPageOffset, this.props.defaultDictionarySize);
+        const arrayBuffer = await this.file.read(dictionaryPageOffset, dictionarySize, signal ?? this.props.signal);
+        const pagesBuf = toUint8Array(arrayBuffer);
+        return await decodeDictionaryBuffer(pagesBuf, context);
+    }
+}
+/** Decodes one dictionary page from an already-read column-chunk range. */
+async function decodeDictionaryBuffer(dictionaryBuffer, context) {
+    const cursor = { buffer: dictionaryBuffer, offset: 0, size: dictionaryBuffer.length };
+    const decodedPage = await decodePage(cursor, context);
+    return decodedPage.dictionary;
+}
+/** Slices one decoded flat column chunk while preserving optional-value alignment. */
+function sliceFlatColumnChunk(columnChunk, definitionLevelMaximum, start, end) {
+    const valueStart = countDefinedValues(columnChunk.dlevels, definitionLevelMaximum, 0, start);
+    const valueEnd = valueStart + countDefinedValues(columnChunk.dlevels, definitionLevelMaximum, start, end);
+    return {
+        rlevels: columnChunk.rlevels.slice(start, end),
+        dlevels: columnChunk.dlevels.slice(start, end),
+        values: columnChunk.values.slice(valueStart, valueEnd),
+        count: end - start,
+        pageHeaders: columnChunk.pageHeaders
+    };
+}
+/** Counts defined primitive values represented by one flat level interval. */
+function countDefinedValues(definitionLevels, definitionLevelMaximum, start, end) {
+    let count = 0;
+    for (let index = start; index < Math.min(end, definitionLevels.length); index++) {
+        if (definitionLevels[index] === definitionLevelMaximum) {
+            count++;
+        }
     }
+    return count;
 }
 //# sourceMappingURL=parquet-reader.js.map

package/dist/parquetjs/parser/parquet-reader.js.map

@@ -1 +1 @@
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