@lemoncat7/dsh-knowledge 0.7.2 → 1.0.0

package/lib/index.js.map

@@ -1 +1 @@
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package/lib/local-provider.d.ts

@@ -3,6 +3,8 @@ import type { KnowledgeProvider } from './provider.js';
 export declare class LocalKnowledgeProvider implements KnowledgeProvider {
     readonly mode: "local";
     private readonly db;
+    private readonly documentStore;
+    private readonly documentsReady;
     private closed;
     constructor(path: string);
     private migrate;

package/lib/local-provider.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"local-provider.d.ts","sourceRoot":"","sources":["../src/local-provider.ts"],"names":[],"mappings":"AAIA,OAAO,EASL,KAAK,iBAAiB,EACtB,KAAK,cAAc,EACnB,KAAK,mBAAmB,EACxB,KAAK,kBAAkB,EACvB,KAAK,aAAa,EAClB,KAAK,kBAAkB,EACvB,KAAK,kBAAkB,EACvB,KAAK,cAAc,EACnB,KAAK,cAAc,EACnB,KAAK,iBAAiB,EAEtB,KAAK,cAAc,EACnB,KAAK,gBAAgB,EACrB,KAAK,cAAc,EACnB,KAAK,mBAAmB,EACxB,KAAK,yBAAyB,EAC9B,KAAK,mBAAmB,EACxB,KAAK,wBAAwB,EAC7B,KAAK,iBAAiB,EACtB,KAAK,sBAAsB,EAC3B,KAAK,sBAAsB,EAC3B,KAAK,iBAAiB,EACtB,KAAK,WAAW,EAChB,KAAK,UAAU,EACf,KAAK,cAAc,EACnB,KAAK,SAAS,EACd,KAAK,aAAa,EAClB,KAAK,eAAe,EACrB,MAAM,aAAa,CAAA;AACpB,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,eAAe,CAAA;AAmBtD,qBAAa,sBAAuB,YAAW,iBAAiB;IAC9D,QAAQ,CAAC,IAAI,EAAG,OAAO,CAAS;IAChC,OAAO,CAAC,QAAQ,CAAC,EAAE,CAAc;IACjC,OAAO,CAAC,QAAQ,CAAC,aAAa,CAAwB;IACtD,OAAO,CAAC,QAAQ,CAAC,cAAc,CAAe;IAC9C,OAAO,CAAC,MAAM,CAAQ;gBAEV,IAAI,EAAE,MAAM;IASxB,OAAO,CAAC,OAAO;IAwKf,OAAO,CAAC,UAAU;IAIZ,WAAW,IAAI,OAAO,CAAC,iBAAiB,CAAC;IASzC,cAAc,CAAC,KAAK,EAAE,sBAAsB,GAAG,OAAO,CAAC,iBAAiB,CAAC;IASzE,kBAAkB,IAAI,OAAO,CAAC,aAAa,EAAE,CAAC;IAM9C,gBAAgB,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,aAAa,GAAG,SAAS,CAAC;IAMhE,mBAAmB,CAAC,KAAK,EAAE,kBAAkB,GAAG,OAAO,CAAC,aAAa,CAAC;IAkBtE,mBAAmB,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE,kBAAkB,GAAG,OAAO,CAAC,aAAa,CAAC;IAmBlF,kBAAkB,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE,kBAAkB,GAAG,OAAO,CAAC,aAAa,CAAC;IAgBjF,oBAAoB,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,aAAa,CAAC;IAYxD,oBAAoB,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,aAAa,CAAC;IAUxD,mBAAmB,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IA0B9C,aAAa,CAAC,eAAe,CAAC,EAAE,MAAM,EAAE,KAAK,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,iBAAiB,EAAE,CAAC;IAgBrF,WAAW,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,iBAAiB,GAAG,SAAS,CAAC;IAO/D,UAAU,CAAC,UAAU,CAAC,EAAE,wBAAwB,EAAE,QAAQ,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,cAAc,EAAE,CAAC;IAU/F,WAAW,CAAC,KAAK,EAAE,mBAAmB,GAAG,OAAO,CAAC,cAAc,CAAC;IAKhE,eAAe,CAAC,KAAK,EAAE,mBAAmB,GAAG,OAAO,CAAC,yBAAyB,CAAC;IAcrF,OAAO,CAAC,cAAc;IAiChB,WAAW,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAMtC,aAAa,CAAC,SAAS,EAAE,MAAM,EAAE,SAAS,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,sBAAsB,EAAE,CAAC;IAiBvF,KAAK,IAAI,OAAO,CAAC,cAAc,CAAC;IAmCtC,OAAO,CAAC,WAAW;IAYb,MAAM,CAAC,OAAO,EAAE,aAAa,GAAG,OAAO,CAAC,SAAS,EAAE,CAAC;IA4D1D,OAAO,CAAC,aAAa;IAwBf,IAAI,CAAC,OAAO,EAAE,WAAW,GAAG,OAAO,CAAC,UAAU,CAAC,cAAc,CAAC,CAAC;IA2B/D,GAAG,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,cAAc,GAAG,SAAS,CAAC;IAMpD,QAAQ,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,gBAAgB,EAAE,CAAC;IAMjD,MAAM,CAAC,KAAK,EAAE,cAAc,GAAG,OAAO,CAAC,cAAc,CAAC;IAQ5D,OAAO,CAAC,WAAW;IAsBb,MAAM,CAAC,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE,cAAc,GAAG,OAAO,CAAC,cAAc,CAAC;IAUxE,OAAO,CAAC,WAAW;IAgCb,OAAO,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,cAAc,CAAC;IAkB5C,MAAM,CAAC,EAAE,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAYjC,OAAO,CAAC,KAAK,EAAE,iBAAiB,EAAE,SAAS,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC;IAKlF,WAAW,CAAC,KAAK,EAAE,iBAAiB,EAAE,SAAS,CAAC,EAAE,MAAM,GAAG,OAAO,CAAC,iBAAiB,CAAC;IAoC3F,OAAO,CAAC,eAAe;IAoBvB,OAAO,CAAC,qBAAqB;IAsC7B,OAAO,CAAC,WAAW;IAMnB,OAAO,CAAC,qBAAqB;IAUvB,cAAc,CAAC,MAAM,EAAE,SAAS,GAAG,UAAU,GAAG,UAAU,EAAE,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,EAAE,CAAC;IAMzG,MAAM,CAAC,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,cAAc,GAAG,OAAO,CAAC,kBAAkB,CAAC;IA8CzE,eAAe,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC;IAapD,kBAAkB,CAAC,SAAS,EAAE,MAAM,EAAE,cAAc,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAM5E,cAAc,CAAC,SAAS,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IAM/D,aAAa,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,mBAAmB,GAAG,SAAS,CAAC;IAMhF,oBAAoB,CAAC,KAAK,EAAE,MAAM,GAAG,IAAI;IAWzC,YAAY,CAAC,KAAK,EAAE,MAAM,GAAG,cAAc,GAAG,SAAS;IAUvD,cAAc,CAAC,IAAI,EAAE,MAAM,EAAE,WAAW,EAAE,eAAe,EAAE,GAAG;QAAE,MAAM,EAAE,cAAc,CAAC;QAAC,KAAK,EAAE,MAAM,CAAA;KAAE;IAgBvG,aAAa,IAAI,cAAc,EAAE;IAKjC,cAAc,CAAC,EAAE,EAAE,MAAM,GAAG,IAAI;IAMhC,cAAc,CAAC,EAAE,EAAE,MAAM,GAAG,IAAI;IAQ1B,KAAK,IAAI,OAAO,CAAC,IAAI,CAAC;IAO5B,OAAO,CAAC,YAAY;IAgBpB,OAAO,CAAC,SAAS;YAQH,gBAAgB;YAMhB,sBAAsB;CAiErC"}

package/lib/local-provider.js

@@ -1,8 +1,11 @@
-import { dirname } from 'node:path';
+import { dirname, join } from 'node:path';
 import { createHash, randomBytes } from 'node:crypto';
 import { mkdirSync } from 'node:fs';
 import { DatabaseSync } from 'node:sqlite';
 import { contentHash, DEFAULT_KNOWLEDGE_BASE_ID, newId, normalizeDraft, normalizeKnowledgeBaseDraft, normalizeKnowledgeMountDraft, normalizeKnowledgeSettings, nowIso, } from './domain.js';
+import { renderKnowledgeMarkdown } from './documents/markdown.js';
+import { knowledgeDocumentPath } from './documents/path.js';
+import { KnowledgeDocumentStore } from './documents/store.js';
 const ENTRY_COLUMNS = `
   id, knowledge_base_id, title, body, type, tags_json, scope_kind, scope_id, confidence,
   status, version, source_json, created_at, updated_at
@@ -16,17 +19,21 @@ const JOINED_ENTRY_COLUMNS = `
 export class LocalKnowledgeProvider {
     mode = 'local';
     db;
+    documentStore;
+    documentsReady;
     closed = false;
     constructor(path) {
         if (path !== ':memory:')
             mkdirSync(dirname(path), { recursive: true });
+        this.documentStore = new KnowledgeDocumentStore(join(dirname(path), 'documents'));
         this.db = new DatabaseSync(path);
         this.db.exec('PRAGMA journal_mode = WAL; PRAGMA foreign_keys = ON; PRAGMA busy_timeout = 5000;');
         this.migrate();
+        this.documentsReady = this.syncAllDocuments();
     }
     migrate() {
         let version = Number(this.db.prepare('PRAGMA user_version').get().user_version ?? 0);
-        if (version > 5)
+        if (version > 6)
             throw new Error(`knowledge database schema ${version} is newer than this plugin supports`);
         if (version === 0)
             this.db.exec(`
@@ -194,11 +201,14 @@ export class LocalKnowledgeProvider {
       PRAGMA user_version = 5;
       COMMIT;
     `);
+        if (version <= 4)
+            version = 5;
+        if (version === 5)
+            this.db.exec('PRAGMA user_version = 6;');
         // Alpha v2 used a migration note as the default base's routing description.
         // Clear only that exact placeholder so existing user-authored descriptions stay untouched.
         this.db.prepare("UPDATE knowledge_bases SET description='' WHERE id=? AND description=?")
             .run(DEFAULT_KNOWLEDGE_BASE_ID, '由 0.2 版本迁移的知识。');
-        this.syncAllDocuments();
     }
     assertOpen() {
         if (this.closed)
@@ -232,6 +242,7 @@ export class LocalKnowledgeProvider {
     }
     async createKnowledgeBase(input) {
         this.assertOpen();
+        await this.documentsReady;
         const draft = normalizeKnowledgeBaseDraft(input);
         const timestamp = nowIso();
         const base = { ...draft, id: newId(), status: 'active', createdAt: timestamp, updatedAt: timestamp };
@@ -240,11 +251,12 @@ export class LocalKnowledgeProvider {
         id,name,description,default_tags_json,extraction_instructions,writeback_provider,writeback_model,status,created_at,updated_at
       ) VALUES(?,?,?,?,?,?,?,'active',?,?)
     `).run(base.id, base.name, base.description, JSON.stringify(base.defaultTags), base.extractionInstructions, base.writebackProvider ?? null, base.writebackModel ?? null, timestamp, timestamp);
-        this.syncKnowledgeDocuments(base.id);
+        await this.syncKnowledgeDocuments(base.id);
         return base;
     }
     async updateKnowledgeBase(id, input) {
         this.assertOpen();
+        await this.documentsReady;
         const current = await this.getKnowledgeBase(id);
         if (current === undefined)
             throw notFound('knowledge base', id);
@@ -255,7 +267,7 @@ export class LocalKnowledgeProvider {
         name=?,description=?,default_tags_json=?,extraction_instructions=?,writeback_provider=?,writeback_model=?,updated_at=?
       WHERE id=?
     `).run(updated.name, updated.description, JSON.stringify(updated.defaultTags), updated.extractionInstructions, updated.writebackProvider ?? null, updated.writebackModel ?? null, updated.updatedAt, id);
-        this.syncKnowledgeDocuments(id);
+        await this.syncKnowledgeDocuments(id);
         return updated;
     }
     async patchKnowledgeBase(id, patch) {
@@ -301,6 +313,8 @@ export class LocalKnowledgeProvider {
     }
     async deleteKnowledgeBase(id) {
         this.assertOpen();
+        await this.documentsReady;
+        const base = await this.getKnowledgeBase(id);
         if (id === DEFAULT_KNOWLEDGE_BASE_ID)
             throw conflict('the default knowledge base cannot be deleted');
         this.transaction(() => {
@@ -323,9 +337,12 @@ export class LocalKnowledgeProvider {
             this.db.prepare('DELETE FROM knowledge_documents WHERE knowledge_base_id=?').run(id);
             this.db.prepare('DELETE FROM knowledge_bases WHERE id=?').run(id);
         });
+        if (base !== undefined)
+            await this.documentStore.deleteBase(this.documentStore.baseDirectory(base));
     }
     async listDocuments(knowledgeBaseId, query) {
         this.assertOpen();
+        await this.documentsReady;
         const where = [];
         const args = [];
         if (knowledgeBaseId !== undefined) {
@@ -343,6 +360,7 @@ export class LocalKnowledgeProvider {
     }
     async getDocument(id) {
         this.assertOpen();
+        await this.documentsReady;
         const row = this.db.prepare('SELECT * FROM knowledge_documents WHERE id=?').get(id);
         return row === undefined ? undefined : rowToDocument(row);
     }
@@ -543,7 +561,10 @@ export class LocalKnowledgeProvider {
                 rows.push(...supplements.filter(row => !seen.has(String(row.id))).slice(0, limit - rows.length));
             }
         }
-        return rows.map(row => ({ entry: rowToEntry(row), score: rankToScore(Number(row.rank ?? 0)) }));
+        return rows.map(row => {
+            const entry = rowToEntry(row);
+            return { entry, score: relevanceScore(entry, text) };
+        });
     }
     searchByTerms(text, scopeSql, scopeArgs, filterSql, filterArgs, limit) {
         const terms = fallbackTerms(text);
@@ -609,8 +630,9 @@ export class LocalKnowledgeProvider {
     }
     async create(draft) {
         this.assertOpen();
+        await this.documentsReady;
         const entry = this.transaction(() => this.insertEntry(draft));
-        this.syncKnowledgeDocuments(entry.knowledgeBaseId);
+        await this.syncKnowledgeDocuments(entry.knowledgeBaseId);
         return entry;
     }
     insertEntry(input) {
@@ -632,11 +654,12 @@ export class LocalKnowledgeProvider {
     }
     async update(id, draft) {
         this.assertOpen();
+        await this.documentsReady;
         const current = await this.get(id);
         const entry = this.transaction(() => this.updateEntry(id, draft, 'update'));
         if (current !== undefined && current.knowledgeBaseId !== entry.knowledgeBaseId)
-            this.syncKnowledgeDocuments(current.knowledgeBaseId);
-        this.syncKnowledgeDocuments(entry.knowledgeBaseId);
+            await this.syncKnowledgeDocuments(current.knowledgeBaseId);
+        await this.syncKnowledgeDocuments(entry.knowledgeBaseId);
         return entry;
     }
     updateEntry(id, input, changeKind) {
@@ -669,6 +692,7 @@ export class LocalKnowledgeProvider {
     }
     async archive(id) {
         this.assertOpen();
+        await this.documentsReady;
         const entry = this.transaction(() => {
             const row = this.db.prepare(`SELECT ${ENTRY_COLUMNS} FROM knowledge_entries WHERE id = ?`).get(id);
             if (row === undefined)
@@ -682,11 +706,12 @@ export class LocalKnowledgeProvider {
             this.db.prepare('DELETE FROM knowledge_fts WHERE knowledge_id = ?').run(id);
             return updated;
         });
-        this.syncKnowledgeDocuments(entry.knowledgeBaseId);
+        await this.syncKnowledgeDocuments(entry.knowledgeBaseId);
         return entry;
     }
     async delete(id) {
         this.assertOpen();
+        await this.documentsReady;
         const current = await this.get(id);
         this.transaction(() => {
             this.db.prepare('DELETE FROM knowledge_fts WHERE knowledge_id = ?').run(id);
@@ -695,7 +720,7 @@ export class LocalKnowledgeProvider {
                 throw notFound('knowledge entry', id);
         });
         if (current !== undefined)
-            this.syncKnowledgeDocuments(current.knowledgeBaseId);
+            await this.syncKnowledgeDocuments(current.knowledgeBaseId);
     }
     async propose(input, sourceKey) {
         this.assertOpen();
@@ -703,6 +728,7 @@ export class LocalKnowledgeProvider {
     }
     async writeDirect(input, sourceKey) {
         this.assertOpen();
+        await this.documentsReady;
         let touchedBaseId;
         const result = this.transaction(() => {
             const resolution = this.resolveDirectProposal(normalizeProposal(input));
@@ -736,7 +762,7 @@ export class LocalKnowledgeProvider {
             };
         });
         if (touchedBaseId !== undefined)
-            this.syncKnowledgeDocuments(touchedBaseId);
+            await this.syncKnowledgeDocuments(touchedBaseId);
         return result;
     }
     insertCandidate(proposal, sourceKey) {
@@ -781,7 +807,8 @@ export class LocalKnowledgeProvider {
         const entries = this.activeEntriesForDraft(proposal.draft);
         const bodyMatch = entries.find(entry => normalizedBody(entry.body) === normalizedBody(proposal.draft.body));
         const titleMatch = entries.find(entry => normalizedTitle(entry.title) === normalizedTitle(proposal.draft.title));
-        const target = bodyMatch ?? titleMatch;
+        const referenceMatch = entries.find(entry => sharesCanonicalTopicReference(entry, proposal.draft));
+        const target = bodyMatch ?? titleMatch ?? referenceMatch;
         if (target === undefined)
             return { outcome: 'created', proposal };
         if (potentiallyConflicts(target, proposal.draft)) {
@@ -820,6 +847,7 @@ export class LocalKnowledgeProvider {
     }
     async review(id, decision) {
         this.assertOpen();
+        await this.documentsReady;
         const reviewed = this.transaction(() => {
             const row = this.db.prepare('SELECT * FROM knowledge_candidates WHERE id = ?').get(id);
             if (row === undefined)
@@ -829,18 +857,34 @@ export class LocalKnowledgeProvider {
                 throw conflict(`candidate ${id} was already ${candidate.status}`);
             let draft = decision.draft === undefined ? candidate.draft : normalizeDraft(decision.draft);
             if (decision.decision === 'approve') {
-                if (candidate.action === 'create') {
-                    this.insertEntry(draft);
-                }
-                else {
+                if (candidate.action === 'conflict') {
                     if (candidate.targetId === undefined)
                         throw new Error('candidate target is missing');
-                    const target = this.db.prepare(`SELECT ${ENTRY_COLUMNS} FROM knowledge_entries WHERE id = ?`).get(candidate.targetId);
-                    if (target === undefined)
+                    const targetRow = this.db.prepare(`SELECT ${ENTRY_COLUMNS} FROM knowledge_entries WHERE id = ?`).get(candidate.targetId);
+                    if (targetRow === undefined)
                         throw notFound('candidate target', candidate.targetId);
-                    if (decision.draft === undefined)
-                        draft = candidate.draft;
-                    this.updateEntry(candidate.targetId, draft, 'update');
+                    const target = rowToEntry(targetRow);
+                    if (draft.knowledgeBaseId !== target.knowledgeBaseId) {
+                        throw conflict('candidate approval cannot move a document between knowledge bases');
+                    }
+                    this.updateEntry(candidate.targetId, mergeKnowledgeDraft(target, draft, true), 'update');
+                }
+                else {
+                    const resolution = this.resolveDirectProposal({
+                        action: candidate.action,
+                        ...candidate.targetId === undefined ? {} : { targetId: candidate.targetId },
+                        draft,
+                        reason: candidate.reason,
+                    });
+                    if (resolution.outcome === 'conflict') {
+                        throw conflict('knowledge changed during review and now requires conflict resolution');
+                    }
+                    if (resolution.outcome !== 'duplicate') {
+                        if (resolution.proposal.action === 'create')
+                            this.insertEntry(resolution.proposal.draft);
+                        else
+                            this.updateEntry(resolution.proposal.targetId, resolution.proposal.draft, 'update');
+                    }
                 }
             }
             const status = decision.decision === 'approve' ? 'approved' : 'rejected';
@@ -851,7 +895,7 @@ export class LocalKnowledgeProvider {
             return { ...candidate, status, reviewedAt, ...note === undefined ? {} : { reviewNote: note } };
         });
         if (decision.decision === 'approve')
-            this.syncKnowledgeDocuments(reviewed.draft.knowledgeBaseId);
+            await this.syncKnowledgeDocuments(reviewed.draft.knowledgeBaseId);
         return reviewed;
     }
     async claimExtraction(sourceKey) {
@@ -941,6 +985,7 @@ export class LocalKnowledgeProvider {
     async close() {
         if (this.closed)
             return;
+        await this.documentsReady;
         this.closed = true;
         this.db.close();
     }
@@ -966,91 +1011,76 @@ export class LocalKnowledgeProvider {
                 .run(entry.id, entry.title, entry.body, entry.tags.join(' '));
         }
     }
-    syncAllDocuments() {
+    async syncAllDocuments() {
+        await this.documentStore.initialize();
         const bases = this.db.prepare('SELECT id FROM knowledge_bases').all();
         for (const base of bases)
-            this.syncKnowledgeDocuments(String(base.id));
+            await this.syncKnowledgeDocuments(String(base.id));
     }
-    syncKnowledgeDocuments(knowledgeBaseId) {
+    async syncKnowledgeDocuments(knowledgeBaseId) {
         const baseRow = this.db.prepare('SELECT * FROM knowledge_bases WHERE id=?').get(knowledgeBaseId);
         if (baseRow === undefined)
             return;
         const base = rowToKnowledgeBase(baseRow);
+        const directory = await this.documentStore.ensureBase(base);
         const entries = this.db.prepare(`
       SELECT ${ENTRY_COLUMNS} FROM knowledge_entries
       WHERE knowledge_base_id=? AND status='active'
-      ORDER BY type, updated_at DESC, id
+      ORDER BY updated_at DESC, id
     `).all(knowledgeBaseId).map(rowToEntry);
         const desired = new Map();
-        desired.set('README.md', {
-            title: base.name,
-            content: renderKnowledgeBaseReadme(base, entries.length),
-            entryCount: entries.length,
-        });
-        for (const [type, meta] of Object.entries(DOCUMENT_TYPES)) {
-            const typed = entries.filter(entry => entry.type === type);
-            if (typed.length === 0)
-                continue;
-            desired.set(meta.relPath, {
-                title: meta.title,
-                content: renderEntryDocument(base, meta.title, typed),
-                entryCount: typed.length,
+        for (const entry of entries) {
+            const relPath = knowledgeDocumentPath(entry);
+            const markdown = renderKnowledgeMarkdown({
+                metadata: {
+                    id: entry.id,
+                    type: entry.type,
+                    tags: entry.tags,
+                    scope: entry.scope,
+                    confidence: entry.confidence,
+                    status: entry.status,
+                },
+                title: entry.title,
+                body: entry.body,
+            });
+            const stored = await this.documentStore.writeDocument(directory, relPath, markdown);
+            desired.set(entry.id, {
+                entry,
+                relPath,
+                content: `# ${markdownHeading(entry.title)}\n\n${entry.body.trim()}\n`,
+                contentHash: stored.contentHash,
             });
         }
-        const timestamp = nowIso();
+        const storedDocuments = await this.documentStore.listDocuments(directory);
+        for (const document of storedDocuments) {
+            const expected = desired.get(document.metadata.id);
+            if (expected === undefined || expected.relPath !== document.relPath) {
+                await this.documentStore.deleteDocument(directory, document.relPath, document.contentHash);
+            }
+        }
         const existing = this.db.prepare('SELECT id,rel_path,created_at FROM knowledge_documents WHERE knowledge_base_id=?')
             .all(knowledgeBaseId);
-        const byPath = new Map(existing.map(row => [String(row.rel_path), row]));
-        for (const [relPath, document] of desired) {
-            const previous = byPath.get(relPath);
-            const hash = createHash('sha256').update(document.content).digest('hex');
+        for (const document of desired.values()) {
             this.db.prepare(`
         INSERT INTO knowledge_documents(
           id,knowledge_base_id,rel_path,title,content,entry_count,content_hash,created_at,updated_at
         ) VALUES(?,?,?,?,?,?,?,?,?)
-        ON CONFLICT(knowledge_base_id,rel_path) DO UPDATE SET
+        ON CONFLICT(id) DO UPDATE SET
+          knowledge_base_id=excluded.knowledge_base_id,rel_path=excluded.rel_path,
           title=excluded.title,content=excluded.content,entry_count=excluded.entry_count,
           content_hash=excluded.content_hash,updated_at=excluded.updated_at
         WHERE knowledge_documents.content_hash<>excluded.content_hash
+           OR knowledge_documents.rel_path<>excluded.rel_path
            OR knowledge_documents.title<>excluded.title
            OR knowledge_documents.entry_count<>excluded.entry_count
-      `).run(previous === undefined ? newId() : String(previous.id), knowledgeBaseId, relPath, document.title, document.content, document.entryCount, hash, previous === undefined ? timestamp : String(previous.created_at), timestamp);
+      `).run(document.entry.id, knowledgeBaseId, document.relPath, document.entry.title, document.content, 1, document.contentHash, document.entry.createdAt, document.entry.updatedAt);
         }
         for (const row of existing) {
-            if (!desired.has(String(row.rel_path)))
+            if (!desired.has(String(row.id)))
                 this.db.prepare('DELETE FROM knowledge_documents WHERE id=?').run(String(row.id));
         }
     }
 }
-const DOCUMENT_TYPES = {
-    preference: { relPath: 'preferences.md', title: '偏好' },
-    fact: { relPath: 'facts.md', title: '事实' },
-    decision: { relPath: 'decisions.md', title: '决策' },
-    procedure: { relPath: 'procedures.md', title: '流程' },
-    lesson: { relPath: 'lessons.md', title: '经验' },
-};
-function renderKnowledgeBaseReadme(base, entryCount) {
-    const lines = [`# ${markdownHeading(base.name)}`, ''];
-    if (base.description)
-        lines.push(base.description, '');
-    lines.push(`> 当前包含 ${entryCount} 条已生效知识，由 DSH Knowledge 自动整理为 Markdown 文档。`, '');
-    if (base.defaultTags.length > 0)
-        lines.push(`默认标签：${base.defaultTags.map(tag => `#${tag}`).join(' ')}`, '');
-    lines.push(`回写模型：${base.writebackProvider && base.writebackModel ? `${base.writebackProvider} / ${base.writebackModel}` : '跟随当前会话模型'}`, '');
-    if (base.extractionInstructions)
-        lines.push('## 提取要求', '', base.extractionInstructions, '');
-    return `${lines.join('\n').trim()}\n`;
-}
-function renderEntryDocument(base, title, entries) {
-    const lines = [`# ${title}`, '', `> ${base.name} · ${entries.length} 条知识`, ''];
-    for (const entry of entries) {
-        lines.push(`## ${markdownHeading(entry.title)}`, '', entry.body.trim(), '');
-        const scope = entry.scope.kind === 'global' ? '全局' : `项目：${entry.scope.id}`;
-        const metadata = [scope, ...entry.tags.map(tag => `#${tag}`), `置信度 ${Math.round(entry.confidence * 100)}%`];
-        lines.push(`<small>${metadata.join(' · ')}</small>`, '');
-    }
-    return `${lines.join('\n').trim()}\n`;
-}
 function markdownHeading(value) {
     return value.replace(/[\r\n]+/g, ' ').replace(/^#+\s*/, '').trim();
 }
@@ -1181,6 +1211,23 @@ function normalizedTitle(value) {
 function normalizedBody(value) {
     return value.normalize('NFKC').toLocaleLowerCase().replace(/\s+/gu, ' ').trim();
 }
+function sharesCanonicalTopicReference(current, incoming) {
+    const currentReferences = canonicalTopicReferences(`${current.title}\n${current.body}`);
+    if (currentReferences.size === 0)
+        return false;
+    return [...canonicalTopicReferences(`${incoming.title}\n${incoming.body}`)]
+        .some(reference => currentReferences.has(reference));
+}
+function canonicalTopicReferences(value) {
+    const references = new Set();
+    for (const match of value.matchAll(/https?:\/\/(?:www\.)?github\.com\/([^\s/?#]+)\/([^\s/?#]+)/giu)) {
+        const owner = match[1]?.toLocaleLowerCase();
+        const repository = match[2]?.replace(/\.git$/iu, '').replace(/[.,，。;；:：!?！？]+$/u, '').toLocaleLowerCase();
+        if (owner && repository)
+            references.add(`github:${owner}/${repository}`);
+    }
+    return references;
+}
 function sameScope(left, right) {
     return left.kind === right.kind && (left.kind === 'global' || left.id === right.id);
 }
@@ -1288,9 +1335,28 @@ function fallbackTerms(text) {
     }
     return [...terms].slice(0, 20);
 }
-function rankToScore(rank) {
-    return 1 / (1 + Math.max(0, rank));
+function relevanceScore(entry, query) {
+    const normalizedQuery = normalizedBody(query);
+    if (normalizedQuery.length === 0)
+        return 1;
+    const title = normalizedBody(entry.title);
+    const body = normalizedBody(entry.body);
+    const tags = normalizedBody(entry.tags.join(' '));
+    const combined = `${title}\n${body}\n${tags}`;
+    if (combined.includes(normalizedQuery))
+        return .98;
+    const terms = fallbackTerms(query).filter(term => !SEARCH_STOP_TERMS.has(term));
+    if (terms.length === 0)
+        return .25;
+    const coverage = terms.filter(term => combined.includes(term)).length / terms.length;
+    const titleCoverage = terms.filter(term => title.includes(term)).length / terms.length;
+    const tagCoverage = terms.filter(term => tags.includes(term)).length / terms.length;
+    return Math.min(.97, .05 + coverage * .72 + titleCoverage * .13 + tagCoverage * .1);
 }
+const SEARCH_STOP_TERMS = new Set([
+    'a', 'an', 'and', 'are', 'for', 'how', 'is', 'of', 'or', 'the', 'to', 'what', 'when', 'where', 'which', 'who', 'why',
+    '什么', '么是', '如何', '怎么', '是否', '介绍',
+]);
 function encodeCursor(updatedAt, id) {
     return Buffer.from(JSON.stringify({ updatedAt, id })).toString('base64url');
 }