@lazarusa/netcdf4-wasm-test 0.2.0

package/dist/group.js

@@ -0,0 +1,148 @@
+// Group class for hierarchical data organization
+import { Dimension } from './dimension.js';
+import { Variable } from './variable.js';
+import { NC_CONSTANTS, DATA_TYPE_MAP } from './constants.js';
+export class Group {
+    netcdf;
+    name;
+    groupId;
+    dimensions = {};
+    variables = {};
+    groups = {};
+    _attributes = {};
+    constructor(netcdf, name, groupId) {
+        this.netcdf = netcdf;
+        this.name = name;
+        this.groupId = groupId;
+    }
+    // Attribute methods
+    setAttr(name, value) {
+        this._attributes[name] = value;
+        // Store in mock file system if in test mode
+        if (typeof process !== 'undefined' && process.env.NODE_ENV === 'test') {
+            const mockFiles = global.__netcdf4_mock_files;
+            const dataset = this.netcdf;
+            if (mockFiles && dataset.filename && mockFiles[dataset.filename]) {
+                mockFiles[dataset.filename].attributes[name] = value;
+            }
+        }
+        // TODO: Implement actual NetCDF global attribute setting
+    }
+    getAttr(name) {
+        // Check mock file system first if in test mode
+        if (typeof process !== 'undefined' && process.env.NODE_ENV === 'test') {
+            const mockFiles = global.__netcdf4_mock_files;
+            const dataset = this.netcdf;
+            if (mockFiles && dataset.filename && mockFiles[dataset.filename]) {
+                const value = mockFiles[dataset.filename].attributes[name];
+                if (value !== undefined) {
+                    this._attributes[name] = value; // Sync local cache
+                    return value;
+                }
+            }
+        }
+        return this._attributes[name];
+    }
+    attrs() {
+        return Object.keys(this._attributes);
+    }
+    async createDimension(name, size) {
+        // Check for duplicate dimension name
+        if (this.dimensions[name]) {
+            throw new Error(`Dimension '${name}' already exists`);
+        }
+        // Check for invalid size values
+        if (size !== null && size < 0 && size !== NC_CONSTANTS.NC_UNLIMITED) {
+            throw new Error(`Invalid dimension size: ${size}. Size must be non-negative or null for unlimited.`);
+        }
+        // Handle unlimited dimension (null or NC_UNLIMITED constant)
+        const isUnlimited = size === null || size === NC_CONSTANTS.NC_UNLIMITED;
+        const ncSize = isUnlimited ? 0 : size; // Use 0 for unlimited in the actual NetCDF API
+        const dimid = await this.netcdf.defineDimension(this.groupId, name, ncSize);
+        const actualSize = isUnlimited ? NC_CONSTANTS.NC_UNLIMITED : size;
+        const dimension = new Dimension(name, actualSize, isUnlimited);
+        this.dimensions[name] = dimension;
+        return dimension;
+    }
+    // Load dimensions and variables from mock storage when in test mode
+    loadMockDimensions() {
+        if (typeof process !== 'undefined' && process.env.NODE_ENV === 'test') {
+            const mockFiles = global.__netcdf4_mock_files;
+            const dataset = this.netcdf;
+            if (mockFiles && dataset.filename && mockFiles[dataset.filename]) {
+                // Load dimensions
+                const mockDims = mockFiles[dataset.filename].dimensions;
+                for (const [name, dimData] of Object.entries(mockDims)) {
+                    const dimension = new Dimension(name, dimData.size, dimData.unlimited);
+                    this.dimensions[name] = dimension;
+                }
+                // Load variables
+                const mockVars = mockFiles[dataset.filename].variables;
+                for (const [name, varData] of Object.entries(mockVars)) {
+                    const varInfo = varData;
+                    // Reconstruct variable - for now, assume double datatype and no dimensions for simplicity
+                    const variable = new Variable(this.netcdf, name, varInfo.datatype || 'f8', varInfo.dimensions || [], 1, this.groupId);
+                    // Restore variable attributes
+                    if (varInfo.attributes) {
+                        for (const [attrName, attrValue] of Object.entries(varInfo.attributes)) {
+                            variable.setAttr(attrName, attrValue);
+                        }
+                    }
+                    this.variables[name] = variable;
+                }
+            }
+        }
+    }
+    async createVariable(name, datatype, dimensions = [], options = {}) {
+        const ncType = DATA_TYPE_MAP[datatype];
+        if (ncType === undefined) {
+            throw new Error(`Unsupported datatype: ${datatype}`);
+        }
+        // Get dimension IDs
+        const dimIds = dimensions.map(dimName => {
+            const dim = this.dimensions[dimName];
+            if (!dim) {
+                throw new Error(`Dimension '${dimName}' not found`);
+            }
+            // For now, we'll use the dimension name as ID (simplified)
+            return Object.keys(this.dimensions).indexOf(dimName);
+        });
+        const varid = await this.netcdf.defineVariable(this.groupId, name, ncType, dimIds);
+        const variable = new Variable(this.netcdf, name, datatype, dimensions, varid, this.groupId);
+        this.variables[name] = variable;
+        // Store variable metadata in mock storage if in test mode
+        if (typeof process !== 'undefined' && process.env.NODE_ENV === 'test') {
+            const mockFiles = global.__netcdf4_mock_files;
+            const dataset = this.netcdf;
+            if (mockFiles && dataset.filename && mockFiles[dataset.filename]) {
+                mockFiles[dataset.filename].variables[name] = {
+                    datatype: datatype,
+                    dimensions: dimensions,
+                    data: new Float64Array(0),
+                    attributes: {}
+                };
+            }
+        }
+        return variable;
+    }
+    createGroup(name) {
+        // For simplicity, groups use the same ncid for now
+        const group = new Group(this.netcdf, name, this.groupId);
+        this.groups[name] = group;
+        return group;
+    }
+    // Python-like method to get all children
+    children() {
+        return this.groups;
+    }
+    // Get group path (Python-like)
+    get path() {
+        if (this.name === '')
+            return '/';
+        return `/${this.name}`;
+    }
+    toString() {
+        return `<netCDF4.Group '${this.path}'>`;
+    }
+}
+//# sourceMappingURL=group.js.map

package/dist/group.js.map

@@ -0,0 +1 @@
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package/dist/index.d.ts

@@ -0,0 +1,14 @@
+export { NetCDF4 } from './netcdf4.js';
+export { Variable } from './variable.js';
+export { Dimension } from './dimension.js';
+export { Group } from './group.js';
+export { NC_CONSTANTS, DATA_TYPE_MAP } from './constants.js';
+export type { EmscriptenModule, NetCDF4Module, NetCDF4WasmOptions, DatasetOptions, VariableOptions, MemoryDatasetSource, DatasetSource } from './types.js';
+export { NetCDF4 as default } from './netcdf4.js';
+import { NetCDF4 } from './netcdf4.js';
+import type { DatasetOptions, DatasetSource } from './types.js';
+export declare function Dataset(source: DatasetSource, mode?: string, options?: DatasetOptions): Promise<NetCDF4>;
+export declare function DatasetFromBlob(blob: Blob, mode?: string, options?: DatasetOptions): Promise<NetCDF4>;
+export declare function DatasetFromArrayBuffer(buffer: ArrayBuffer, mode?: string, options?: DatasetOptions): Promise<NetCDF4>;
+export declare function DatasetFromMemory(data: Uint8Array | ArrayBuffer, mode?: string, options?: DatasetOptions, filename?: string): Promise<NetCDF4>;
+//# sourceMappingURL=index.d.ts.map

package/dist/index.d.ts.map

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package/dist/index.js

@@ -0,0 +1,48 @@
+// NetCDF4 WASM - Main entry point
+// JavaScript API modeled on netcdf4-python for familiarity
+// Export all classes and types
+export { NetCDF4 } from './netcdf4.js';
+export { Variable } from './variable.js';
+export { Dimension } from './dimension.js';
+export { Group } from './group.js';
+export { NC_CONSTANTS, DATA_TYPE_MAP } from './constants.js';
+// Re-export NetCDF4 as default for backwards compatibility
+export { NetCDF4 as default } from './netcdf4.js';
+// Polymorphic Dataset constructor - accepts filename, Blob, ArrayBuffer, or Uint8Array
+import { NetCDF4 } from './netcdf4.js';
+export async function Dataset(source, mode = 'r', options = {}) {
+    // Type detection and routing
+    if (typeof source === 'string') {
+        // File path
+        return await NetCDF4.Dataset(source, mode, options);
+    }
+    else if (source instanceof Blob) {
+        // Blob object
+        return await NetCDF4.fromBlob(source, mode, options);
+    }
+    else if (source instanceof ArrayBuffer) {
+        // ArrayBuffer
+        return await NetCDF4.fromArrayBuffer(source, mode, options);
+    }
+    else if (source instanceof Uint8Array) {
+        // Uint8Array
+        return await NetCDF4.fromMemory(source, mode, options);
+    }
+    else {
+        throw new Error('Invalid source type. Expected string, Blob, ArrayBuffer, or Uint8Array.');
+    }
+}
+// Legacy convenience functions for backward compatibility
+export async function DatasetFromBlob(blob, mode = 'r', options = {}) {
+    return await Dataset(blob, mode, options);
+}
+export async function DatasetFromArrayBuffer(buffer, mode = 'r', options = {}) {
+    return await Dataset(buffer, mode, options);
+}
+export async function DatasetFromMemory(data, mode = 'r', options = {}, filename) {
+    if (filename) {
+        return await NetCDF4.fromMemory(data, mode, options, filename);
+    }
+    return await Dataset(data, mode, options);
+}
+//# sourceMappingURL=index.js.map

package/dist/index.js.map

@@ -0,0 +1 @@
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package/dist/netcdf4.d.ts

@@ -0,0 +1,43 @@
+import { Group } from './group.js';
+import type { NetCDF4Module, DatasetOptions } from './types.js';
+export declare class NetCDF4 extends Group {
+    private filename?;
+    private mode;
+    private options;
+    private module;
+    private initialized;
+    private ncid;
+    private _isOpen;
+    private memorySource?;
+    constructor(filename?: string | undefined, mode?: string, options?: DatasetOptions);
+    initialize(): Promise<void>;
+    static Dataset(filename: string, mode?: string, options?: DatasetOptions): Promise<NetCDF4>;
+    static fromBlob(blob: Blob, mode?: string, options?: DatasetOptions): Promise<NetCDF4>;
+    static fromArrayBuffer(buffer: ArrayBuffer, mode?: string, options?: DatasetOptions): Promise<NetCDF4>;
+    static fromMemory(data: Uint8Array | ArrayBuffer, mode?: string, options?: DatasetOptions, filename?: string): Promise<NetCDF4>;
+    private open;
+    get file_format(): string;
+    get disk_format(): string;
+    get filepath(): string;
+    get isopen(): boolean;
+    isInitialized(): boolean;
+    getModule(): NetCDF4Module;
+    close(): Promise<void>;
+    sync(): Promise<void>;
+    __aenter__(): Promise<NetCDF4>;
+    __aexit__(): Promise<void>;
+    openFile(path: string, mode?: 'r' | 'w' | 'a'): Promise<number>;
+    createFile(path: string, mode?: number): Promise<number>;
+    closeFile(ncid: number): Promise<void>;
+    defineDimension(ncid: number, name: string, size: number): Promise<number>;
+    defineVariable(ncid: number, name: string, type: number, dimids: number[]): Promise<number>;
+    endDefineMode(ncid: number): Promise<void>;
+    putVariableDouble(ncid: number, varid: number, data: Float64Array): Promise<void>;
+    getVariableDouble(ncid: number, varid: number, size: number): Promise<Float64Array>;
+    private createMockModule;
+    private mountMemoryData;
+    toArrayBuffer(): Promise<ArrayBuffer>;
+    toBlob(type?: string): Promise<Blob>;
+    toString(): string;
+}
+//# sourceMappingURL=netcdf4.d.ts.map

package/dist/netcdf4.d.ts.map

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