@laitszkin/apollo-toolkit 4.0.11 → 4.1.0

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Files changed (134) hide show
  1. package/AGENTS.md +37 -27
  2. package/CHANGELOG.md +31 -0
  3. package/CLAUDE.md +37 -27
  4. package/README.md +15 -2
  5. package/assets/spec/rg13-1780435029246/test-questions.json +1 -0
  6. package/assets/spec/rg13-1780468345132/test-questions.json +1 -0
  7. package/package.json +3 -3
  8. package/packages/cli/dist/tool-registration.js +1 -0
  9. package/packages/cli/dist/tsconfig.tsbuildinfo +1 -1
  10. package/packages/cli/tool-registration.ts +1 -0
  11. package/packages/tools/architecture/dist/index.js +539 -2
  12. package/packages/tools/architecture/dist/index.test.d.ts +1 -0
  13. package/packages/tools/architecture/dist/index.test.js +229 -0
  14. package/packages/tools/architecture/dist/tsconfig.tsbuildinfo +1 -1
  15. package/packages/tools/architecture/index.test.ts +329 -0
  16. package/packages/tools/architecture/index.ts +607 -5
  17. package/packages/tools/codegraph/dist/index.d.ts +3 -0
  18. package/packages/tools/codegraph/dist/index.js +157 -0
  19. package/packages/tools/codegraph/dist/lib/cg-instance.d.ts +29 -0
  20. package/packages/tools/codegraph/dist/lib/cg-instance.js +59 -0
  21. package/packages/tools/codegraph/dist/lib/cg-instance.test.d.ts +1 -0
  22. package/packages/tools/codegraph/dist/lib/cg-instance.test.js +27 -0
  23. package/packages/tools/codegraph/dist/lib/cmd-explore.d.ts +5 -0
  24. package/packages/tools/codegraph/dist/lib/cmd-explore.js +95 -0
  25. package/packages/tools/codegraph/dist/lib/cmd-explore.test.d.ts +1 -0
  26. package/packages/tools/codegraph/dist/lib/cmd-explore.test.js +133 -0
  27. package/packages/tools/codegraph/dist/lib/cmd-flag-splice.test.d.ts +1 -0
  28. package/packages/tools/codegraph/dist/lib/cmd-flag-splice.test.js +83 -0
  29. package/packages/tools/codegraph/dist/lib/cmd-init.d.ts +5 -0
  30. package/packages/tools/codegraph/dist/lib/cmd-init.js +50 -0
  31. package/packages/tools/codegraph/dist/lib/cmd-init.test.d.ts +1 -0
  32. package/packages/tools/codegraph/dist/lib/cmd-init.test.js +51 -0
  33. package/packages/tools/codegraph/dist/lib/cmd-list-apis.d.ts +5 -0
  34. package/packages/tools/codegraph/dist/lib/cmd-list-apis.js +64 -0
  35. package/packages/tools/codegraph/dist/lib/cmd-list-apis.test.d.ts +1 -0
  36. package/packages/tools/codegraph/dist/lib/cmd-list-apis.test.js +69 -0
  37. package/packages/tools/codegraph/dist/lib/cmd-search.d.ts +5 -0
  38. package/packages/tools/codegraph/dist/lib/cmd-search.js +21 -0
  39. package/packages/tools/codegraph/dist/lib/cmd-search.test.d.ts +1 -0
  40. package/packages/tools/codegraph/dist/lib/cmd-search.test.js +30 -0
  41. package/packages/tools/codegraph/dist/lib/cmd-status.d.ts +4 -0
  42. package/packages/tools/codegraph/dist/lib/cmd-status.js +44 -0
  43. package/packages/tools/codegraph/dist/lib/cmd-status.test.d.ts +1 -0
  44. package/packages/tools/codegraph/dist/lib/cmd-status.test.js +72 -0
  45. package/packages/tools/codegraph/dist/lib/cmd-survey.d.ts +36 -0
  46. package/packages/tools/codegraph/dist/lib/cmd-survey.js +142 -0
  47. package/packages/tools/codegraph/dist/lib/cmd-survey.test.d.ts +1 -0
  48. package/packages/tools/codegraph/dist/lib/cmd-survey.test.js +136 -0
  49. package/packages/tools/codegraph/dist/lib/cmd-sync.d.ts +4 -0
  50. package/packages/tools/codegraph/dist/lib/cmd-sync.js +51 -0
  51. package/packages/tools/codegraph/dist/lib/cmd-sync.test.d.ts +1 -0
  52. package/packages/tools/codegraph/dist/lib/cmd-sync.test.js +30 -0
  53. package/packages/tools/codegraph/dist/lib/cmd-verify.d.ts +4 -0
  54. package/packages/tools/codegraph/dist/lib/cmd-verify.js +134 -0
  55. package/packages/tools/codegraph/dist/lib/cmd-verify.test.d.ts +1 -0
  56. package/packages/tools/codegraph/dist/lib/cmd-verify.test.js +139 -0
  57. package/packages/tools/codegraph/dist/lib/formatter.d.ts +67 -0
  58. package/packages/tools/codegraph/dist/lib/formatter.js +107 -0
  59. package/packages/tools/codegraph/dist/lib/formatter.test.d.ts +1 -0
  60. package/packages/tools/codegraph/dist/lib/formatter.test.js +41 -0
  61. package/packages/tools/codegraph/dist/lib/survey/grouper.d.ts +19 -0
  62. package/packages/tools/codegraph/dist/lib/survey/grouper.js +194 -0
  63. package/packages/tools/codegraph/dist/lib/survey/grouper.test.d.ts +1 -0
  64. package/packages/tools/codegraph/dist/lib/survey/grouper.test.js +62 -0
  65. package/packages/tools/codegraph/dist/lib/survey/scanner.d.ts +31 -0
  66. package/packages/tools/codegraph/dist/lib/survey/scanner.js +50 -0
  67. package/packages/tools/codegraph/dist/lib/verify/checker.d.ts +32 -0
  68. package/packages/tools/codegraph/dist/lib/verify/checker.js +146 -0
  69. package/packages/tools/codegraph/dist/lib/verify/checker.test.d.ts +1 -0
  70. package/packages/tools/codegraph/dist/lib/verify/checker.test.js +128 -0
  71. package/packages/tools/codegraph/dist/tsconfig.tsbuildinfo +1 -0
  72. package/packages/tools/codegraph/env.d.ts +56 -0
  73. package/packages/tools/codegraph/index.ts +173 -0
  74. package/packages/tools/codegraph/lib/cg-instance.test.ts +36 -0
  75. package/packages/tools/codegraph/lib/cg-instance.ts +66 -0
  76. package/packages/tools/codegraph/lib/cmd-explore.test.ts +195 -0
  77. package/packages/tools/codegraph/lib/cmd-explore.ts +129 -0
  78. package/packages/tools/codegraph/lib/cmd-flag-splice.test.ts +94 -0
  79. package/packages/tools/codegraph/lib/cmd-init.test.ts +68 -0
  80. package/packages/tools/codegraph/lib/cmd-init.ts +60 -0
  81. package/packages/tools/codegraph/lib/cmd-list-apis.test.ts +80 -0
  82. package/packages/tools/codegraph/lib/cmd-list-apis.ts +90 -0
  83. package/packages/tools/codegraph/lib/cmd-search.test.ts +37 -0
  84. package/packages/tools/codegraph/lib/cmd-search.ts +32 -0
  85. package/packages/tools/codegraph/lib/cmd-status.test.ts +86 -0
  86. package/packages/tools/codegraph/lib/cmd-status.ts +53 -0
  87. package/packages/tools/codegraph/lib/cmd-survey.test.ts +161 -0
  88. package/packages/tools/codegraph/lib/cmd-survey.ts +199 -0
  89. package/packages/tools/codegraph/lib/cmd-sync.test.ts +41 -0
  90. package/packages/tools/codegraph/lib/cmd-sync.ts +62 -0
  91. package/packages/tools/codegraph/lib/cmd-verify.test.ts +162 -0
  92. package/packages/tools/codegraph/lib/cmd-verify.ts +145 -0
  93. package/packages/tools/codegraph/lib/formatter.test.ts +47 -0
  94. package/packages/tools/codegraph/lib/formatter.ts +130 -0
  95. package/packages/tools/codegraph/lib/survey/grouper.test.ts +72 -0
  96. package/packages/tools/codegraph/lib/survey/grouper.ts +226 -0
  97. package/packages/tools/codegraph/lib/survey/scanner.ts +89 -0
  98. package/packages/tools/codegraph/lib/verify/checker.test.ts +140 -0
  99. package/packages/tools/codegraph/lib/verify/checker.ts +172 -0
  100. package/packages/tools/codegraph/package.json +23 -0
  101. package/packages/tools/codegraph/tsconfig.json +22 -0
  102. package/resources/project-architecture/atlas/atlas.history.log +32 -0
  103. package/resources/project-architecture/atlas/atlas.history.undo.json +356 -28
  104. package/resources/project-architecture/atlas/atlas.history.undo.stack.json +14350 -0
  105. package/resources/project-architecture/atlas/atlas.index.yaml +76 -12
  106. package/resources/project-architecture/atlas/features/codegraph.yaml +95 -0
  107. package/resources/project-architecture/atlas/features/eval-ci-gate.yaml +6 -1
  108. package/resources/project-architecture/atlas/features/eval-cli.yaml +16 -1
  109. package/resources/project-architecture/atlas/features/eval-executor.yaml +12 -2
  110. package/resources/project-architecture/atlas/features/eval-isolation.yaml +6 -1
  111. package/resources/project-architecture/atlas/features/eval-optimizer.yaml +17 -2
  112. package/resources/project-architecture/atlas/features/eval-question.yaml +12 -2
  113. package/resources/project-architecture/atlas/features/eval-reporter.yaml +6 -1
  114. package/resources/project-architecture/atlas/features/eval-scorer.yaml +12 -2
  115. package/resources/project-architecture/features/codegraph/cg-discovery.html +47 -0
  116. package/resources/project-architecture/features/codegraph/cg-lifecycle.html +48 -0
  117. package/resources/project-architecture/features/codegraph/cg-validation.html +47 -0
  118. package/resources/project-architecture/features/codegraph/index.html +58 -0
  119. package/resources/project-architecture/features/eval-ci-gate/workflow-trigger.html +6 -1
  120. package/resources/project-architecture/features/eval-cli/cli-handler.html +8 -1
  121. package/resources/project-architecture/features/eval-executor/exec-api-client.html +6 -1
  122. package/resources/project-architecture/features/eval-executor/trace-recorder.html +6 -1
  123. package/resources/project-architecture/features/eval-isolation/tool-dispatcher.html +6 -1
  124. package/resources/project-architecture/features/eval-optimizer/dedup-engine.html +6 -1
  125. package/resources/project-architecture/features/eval-optimizer/issue-extractor.html +7 -1
  126. package/resources/project-architecture/features/eval-question/question-loader.html +6 -1
  127. package/resources/project-architecture/features/eval-question/variant-generator.html +6 -1
  128. package/resources/project-architecture/features/eval-reporter/report-composer.html +6 -1
  129. package/resources/project-architecture/features/eval-scorer/judge-api-client.html +6 -1
  130. package/resources/project-architecture/features/eval-scorer/judge-prompt-builder.html +6 -1
  131. package/resources/project-architecture/index.html +200 -94
  132. package/skills/design/SKILL.md +33 -0
  133. package/skills/init-project-html/SKILL.md +12 -11
  134. package/tsconfig.json +1 -0
package/AGENTS.md CHANGED
@@ -2,38 +2,48 @@
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  ## Common Development Commands
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- - `npm test` - 執行 Node 測試套件（`node --test`）。
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- - `node dist/bin/apollo-toolkit.js [mode...]` - 直接從倉庫啟動 CLI，將技能安裝至指定目標（codex/openclaw/trae/agents/claude-code/all）。
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- - `node dist/bin/apollo-toolkit.js uninstall [mode...]` - 從指定目標移除已安裝的 Apollo Toolkit 技能。
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- - `node dist/bin/apollo-toolkit.js tools` - 列出所有內建 CLI 工具及其分類。
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- - `node dist/bin/apollo-toolkit.js <tool> [args...]` - 執行內建工具（如 `filter-logs`、`search-logs`、`architecture`、`create-specs` 等）。
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- - `node dist/bin/apollo-toolkit.js architecture [diff|merge]` - 開啟專案 HTML 架構圖、搭配 `diff` 產生分頁式 before/after 檢視器，或使用 `merge --spec <dir>` 將 spec 的架構變更合併至基礎架構圖。
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- - `node dist/bin/apollo-toolkit.js eval <skill>` - 對指定技能執行自動化評測（LLM-as-Judge），產出結構化報告和優化 diff。
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- - `apltk validate-skill-frontmatter` - 驗證 `skills/` 下所有技能 `SKILL.md` 的 frontmatter 格式與命名規範。
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- - `apltk validate-openai-agent-config` - 驗證所有技能 `agents/openai.yaml` 的設定完整性。
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- - `./scripts/install_skills.sh [mode...]` - 透過本地 shell 腳本安裝技能（非 npm 安裝方式）。
5
+ - `npm test` - Run Node test suite (`node --test`).
6
+ - `npm run build` - Full build of all packages.
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+ - `node dist/bin/apollo-toolkit.js [mode...]` - Start CLI, install skills to targets (codex/openclaw/trae/agents/claude-code/all).
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+ - `node dist/bin/apollo-toolkit.js uninstall [mode...]` - Remove Apollo Toolkit skills from targets.
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+ - `node dist/bin/apollo-toolkit.js tools` - List all built-in CLI tools and their categories.
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+ - `node dist/bin/apollo-toolkit.js <tool> [args...]` - Run a built-in tool (e.g., `codegraph`, `architecture`, `filter-logs`).
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+ - `apltk codegraph <subcommand> [options]` - CodeGraph code intelligence CLI (init/sync/status/search/explore/survey/list-apis/verify). Powered by [@colbymchenry/codegraph](https://github.com/colbymchenry/codegraph), a tree-sitter-backed code knowledge graph engine.
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+ - `apltk architecture [diff|merge|apply|template]` - Architecture atlas management and spec overlay operations.
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+ - `apltk eval <skill>` - LLM-as-Judge skill evaluation.
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+ - `apltk validate-skill-frontmatter` - Validate SKILL.md frontmatter format.
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+ - `apltk validate-openai-agent-config` - Validate agents/openai.yaml configuration.
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+ - `./scripts/install_skills.sh [mode...]` - Local shell script to install skills.
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17
 
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  ## Project Business Goals
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19
 
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  - Provide a curated set of reusable agent skills installable into Codex, OpenClaw, Trae, Agents, and Claude Code skill directories.
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- - Enable spec-first software delivery: feature planning, implementation (including parallel subagents and worktree isolation), code review, systematic debugging, and release management.
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- - Support evidence-based research (deep research, financial analysis, API fingerprinting), media generation (video, audio, storyboard), and educational content (PDF exams, error books, KaTeX rendering).
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+ - Enable spec-first software delivery with deterministic tooling: feature planning, tree-sitter-backed code discovery, architecture diff with verification, code review, systematic debugging, release management.
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+ - Support evidence-based research, media generation, and educational content workflows.
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  - Automate platform workflows: GitHub issue/PR operations and blockchain development (Solana, Jupiter).
22
- - Keep skills focused, composable, and easy to reuse; split shared capabilities into dedicated skills when multiple workflows can depend on them.
24
+ - Keep skills focused and composable; split shared capabilities into dedicated skills when multiple workflows depend on them.
23
25
 
24
26
  ## Project Documentation Index
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27
 
26
- - `docs/features/skill-installation.md` - 安裝、解除安裝與使用內建工具
27
- - `docs/features/software-development.md` - spec 驅動的開發生命週期
28
- - `docs/features/research-and-content.md` - 研究、媒體與教育內容生成
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- - `docs/features/platform-automation.md` - GitHub、區塊鏈與 OpenClaw 自動化
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- - `docs/features/catalog-maintenance.md` - 技能優化、記憶管理、記帳與驗證
31
- - `docs/architecture/cli-architecture.md` - CLI 設計：命令調度、工具註冊、更新檢查
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- - `docs/architecture/installer-architecture.md` - 安裝器設計：原子同步、manifest 追蹤、連結模式
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- - `docs/architecture/skill-structure.md` - 技能目錄佈局、frontmatter 規範、選擇性擴充
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- - `docs/principles/naming-conventions.md` - 命名慣例：kebab-case、文件命名、工具命名
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- - `docs/principles/skill-development.md` - 技能開發慣例：frontmatter、主體結構、依賴宣告
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- - `docs/principles/testing-conventions.md` - 測試慣例：node:test、隔離、輸出捕捉
37
- - `README.md` - 公開安裝指南與技能目錄
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- - `CHANGELOG.md` - 版本發佈歷史
39
- - `LICENSE` - MIT 授權條款
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+ - `docs/features/skill-installation.md` - Install, uninstall, and use built-in tools
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+ - `docs/features/software-development.md` - Spec-driven development lifecycle
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+ - `docs/features/research-and-content.md` - Research, media, and educational content generation
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+ - `docs/features/platform-automation.md` - GitHub, blockchain, and OpenClaw automation
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+ - `docs/features/catalog-maintenance.md` - Skill optimization, memory management, billing, and validation
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+ - `docs/architecture/cli-architecture.md` - CLI design: command dispatch, tool registration, update checks
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+ - `docs/architecture/installer-architecture.md` - Installer design: atomic sync, manifest tracking, link modes
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+ - `docs/architecture/skill-structure.md` - Skill directory layout, frontmatter conventions, optional extensions
36
+ - `docs/principles/naming-conventions.md` - Naming conventions: kebab-case, documentation naming, tool naming
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+ - `docs/principles/skill-development.md` - Skill development conventions: frontmatter, body structure, dependency declarations
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+ - `docs/principles/testing-conventions.md` - Testing conventions: node:test, isolation, output capture
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+ - `README.md` - Public installation guide and skill catalog
40
+ - `CHANGELOG.md` - Release history
41
+ - `LICENSE` - MIT License
42
+
43
+ ## Prohibitions
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+
45
+ - Do not install uncommitted skill changes directly.
46
+ - Do not create automated database migrations.
47
+ - Do not merge spec implementation branches without code review.
48
+ - Do not manually edit `.codegraph/codegraph.db` (managed internally by CodeGraph).
49
+ - YAML values containing colons (`in:`, `out:`, etc.) must be quoted (e.g., `'projectRoot: string'`).
package/CHANGELOG.md CHANGED
@@ -2,6 +2,37 @@
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  All notable changes to this repository are documented in this file.
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5
+ ## [v4.1.0] - 2026-06-03
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+
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+ ### Added
8
+
9
+ - **CodeGraph integration**: New `apltk codegraph` CLI with 8 subcommands (init/sync/status/search/explore/survey/list-apis/verify) powered by [@colbymchenry/codegraph](https://github.com/colbymchenry/codegraph) — a tree-sitter-backed code knowledge graph engine.
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+ - `init` — initialize `.codegraph/` SQLite database and optionally run full index
11
+ - `sync` — incremental index refresh
12
+ - `status` — query index statistics (files, nodes, edges, languages)
13
+ - `search` — full-text symbol search via FTS5
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+ - `explore` — deep-dive on a symbol (callers, callees, source context)
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+ - `survey` — directory scan with connected-component analysis, submodule grouping, and cross-boundary edge suggestions
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+ - `list-apis` — list public API surface per feature, with `--all` flag for non-exported symbols
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+ - `verify` — validate spec architecture overlays against actual CodeGraph index
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+ - `init-project-html` skill: step 1 uses `codegraph survey` for project structure discovery.
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+ - `design` skill: step 5e includes `apltk codegraph list-apis --all` for API surface enumeration.
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+ - Architecture atlas: 3 new external actors (tool-registry, tui-lib, codegraph-npm), 6 new cross-feature edges forming complete eval pipeline, 13 new function I/O details across eval submodules.
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+ - `packages/tools/codegraph/env.d.ts`: type declarations for `@colbymchenry/codegraph` API.
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+ - Lazy import pattern (`getCodeGraphModule`) for graceful MODULE_NOT_FOUND handling.
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+ - Regression tests: flag-splice (`--all`/`--index`), init check for status/search, edge relationship validation.
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+
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+ ### Changed
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+
27
+ - `apltk` global CLI permission: ensure `dist/bin/apollo-toolkit.js` has executable bit after `tsc --build`.
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+ - `rewrite-imports.test.js`: relax TOOL_MODULE_NAMES assertion to accept bare specifier format.
29
+
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+ ### Documentation
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+
32
+ - README: add CodeGraph integration section with credit to [@colbymchenry/codegraph](https://github.com/colbymchenry/codegraph).
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+ - CLAUDE.md, AGENTS.md: add `codegraph` and `architecture apply/template` commands; add prohibitions block.
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+ - Architecture atlas re-rendered with updated summary, enriched actors/edges/functions.
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+
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  ## [v4.0.11] - 2026-06-02
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  ### Changed
package/CLAUDE.md CHANGED
@@ -2,38 +2,48 @@
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  ## Common Development Commands
4
4
 
5
- - `npm test` - 執行 Node 測試套件（`node --test`）。
6
- - `node dist/bin/apollo-toolkit.js [mode...]` - 直接從倉庫啟動 CLI，將技能安裝至指定目標（codex/openclaw/trae/agents/claude-code/all）。
7
- - `node dist/bin/apollo-toolkit.js uninstall [mode...]` - 從指定目標移除已安裝的 Apollo Toolkit 技能。
8
- - `node dist/bin/apollo-toolkit.js tools` - 列出所有內建 CLI 工具及其分類。
9
- - `node dist/bin/apollo-toolkit.js <tool> [args...]` - 執行內建工具（如 `filter-logs`、`search-logs`、`architecture`、`create-specs` 等）。
10
- - `node dist/bin/apollo-toolkit.js architecture [diff|merge]` - 開啟專案 HTML 架構圖、搭配 `diff` 產生分頁式 before/after 檢視器，或使用 `merge --spec <dir>` 將 spec 的架構變更合併至基礎架構圖。
11
- - `node dist/bin/apollo-toolkit.js eval <skill>` - 對指定技能執行自動化評測（LLM-as-Judge），產出結構化報告和優化 diff。
12
- - `apltk validate-skill-frontmatter` - 驗證 `skills/` 下所有技能 `SKILL.md` 的 frontmatter 格式與命名規範。
13
- - `apltk validate-openai-agent-config` - 驗證所有技能 `agents/openai.yaml` 的設定完整性。
14
- - `./scripts/install_skills.sh [mode...]` - 透過本地 shell 腳本安裝技能（非 npm 安裝方式）。
5
+ - `npm test` - Run Node test suite (`node --test`).
6
+ - `npm run build` - Full build of all packages.
7
+ - `node dist/bin/apollo-toolkit.js [mode...]` - Start CLI, install skills to targets (codex/openclaw/trae/agents/claude-code/all).
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+ - `node dist/bin/apollo-toolkit.js uninstall [mode...]` - Remove Apollo Toolkit skills from targets.
9
+ - `node dist/bin/apollo-toolkit.js tools` - List all built-in CLI tools and their categories.
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+ - `node dist/bin/apollo-toolkit.js <tool> [args...]` - Run a built-in tool (e.g., `codegraph`, `architecture`, `filter-logs`).
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+ - `apltk codegraph <subcommand> [options]` - CodeGraph code intelligence CLI (init/sync/status/search/explore/survey/list-apis/verify). Powered by [@colbymchenry/codegraph](https://github.com/colbymchenry/codegraph), a tree-sitter-backed code knowledge graph engine.
12
+ - `apltk architecture [diff|merge|apply|template]` - Architecture atlas management and spec overlay operations.
13
+ - `apltk eval <skill>` - LLM-as-Judge skill evaluation.
14
+ - `apltk validate-skill-frontmatter` - Validate SKILL.md frontmatter format.
15
+ - `apltk validate-openai-agent-config` - Validate agents/openai.yaml configuration.
16
+ - `./scripts/install_skills.sh [mode...]` - Local shell script to install skills.
15
17
 
16
18
  ## Project Business Goals
17
19
 
18
20
  - Provide a curated set of reusable agent skills installable into Codex, OpenClaw, Trae, Agents, and Claude Code skill directories.
19
- - Enable spec-first software delivery: feature planning, implementation (including parallel subagents and worktree isolation), code review, systematic debugging, and release management.
20
- - Support evidence-based research (deep research, financial analysis, API fingerprinting), media generation (video, audio, storyboard), and educational content (PDF exams, error books, KaTeX rendering).
21
+ - Enable spec-first software delivery with deterministic tooling: feature planning, tree-sitter-backed code discovery, architecture diff with verification, code review, systematic debugging, release management.
22
+ - Support evidence-based research, media generation, and educational content workflows.
21
23
  - Automate platform workflows: GitHub issue/PR operations and blockchain development (Solana, Jupiter).
22
- - Keep skills focused, composable, and easy to reuse; split shared capabilities into dedicated skills when multiple workflows can depend on them.
24
+ - Keep skills focused and composable; split shared capabilities into dedicated skills when multiple workflows depend on them.
23
25
 
24
26
  ## Project Documentation Index
25
27
 
26
- - `docs/features/skill-installation.md` - 安裝、解除安裝與使用內建工具
27
- - `docs/features/software-development.md` - spec 驅動的開發生命週期
28
- - `docs/features/research-and-content.md` - 研究、媒體與教育內容生成
29
- - `docs/features/platform-automation.md` - GitHub、區塊鏈與 OpenClaw 自動化
30
- - `docs/features/catalog-maintenance.md` - 技能優化、記憶管理、記帳與驗證
31
- - `docs/architecture/cli-architecture.md` - CLI 設計：命令調度、工具註冊、更新檢查
32
- - `docs/architecture/installer-architecture.md` - 安裝器設計：原子同步、manifest 追蹤、連結模式
33
- - `docs/architecture/skill-structure.md` - 技能目錄佈局、frontmatter 規範、選擇性擴充
34
- - `docs/principles/naming-conventions.md` - 命名慣例：kebab-case、文件命名、工具命名
35
- - `docs/principles/skill-development.md` - 技能開發慣例：frontmatter、主體結構、依賴宣告
36
- - `docs/principles/testing-conventions.md` - 測試慣例：node:test、隔離、輸出捕捉
37
- - `README.md` - 公開安裝指南與技能目錄
38
- - `CHANGELOG.md` - 版本發佈歷史
39
- - `LICENSE` - MIT 授權條款
28
+ - `docs/features/skill-installation.md` - Install, uninstall, and use built-in tools
29
+ - `docs/features/software-development.md` - Spec-driven development lifecycle
30
+ - `docs/features/research-and-content.md` - Research, media, and educational content generation
31
+ - `docs/features/platform-automation.md` - GitHub, blockchain, and OpenClaw automation
32
+ - `docs/features/catalog-maintenance.md` - Skill optimization, memory management, billing, and validation
33
+ - `docs/architecture/cli-architecture.md` - CLI design: command dispatch, tool registration, update checks
34
+ - `docs/architecture/installer-architecture.md` - Installer design: atomic sync, manifest tracking, link modes
35
+ - `docs/architecture/skill-structure.md` - Skill directory layout, frontmatter conventions, optional extensions
36
+ - `docs/principles/naming-conventions.md` - Naming conventions: kebab-case, documentation naming, tool naming
37
+ - `docs/principles/skill-development.md` - Skill development conventions: frontmatter, body structure, dependency declarations
38
+ - `docs/principles/testing-conventions.md` - Testing conventions: node:test, isolation, output capture
39
+ - `README.md` - Public installation guide and skill catalog
40
+ - `CHANGELOG.md` - Release history
41
+ - `LICENSE` - MIT License
42
+
43
+ ## Prohibitions
44
+
45
+ - Do not install uncommitted skill changes directly.
46
+ - Do not create automated database migrations.
47
+ - Do not merge spec implementation branches without code review.
48
+ - Do not manually edit `.codegraph/codegraph.db` (managed internally by CodeGraph).
49
+ - YAML values containing colons (`in:`, `out:`, etc.) must be quoted (e.g., `'projectRoot: string'`).
package/README.md CHANGED
@@ -92,9 +92,9 @@ apltk
92
92
  apollo-toolkit
93
93
  ```
94
94
 
95
- Global install 後，`apltk` 與 `apollo-toolkit` 都會啟動同一個 Apollo Toolkit CLI。直接執行 `apltk` 會打開互動安裝頁，並在互動模式下先檢查 npm registry 是否有新版可用；若有，CLI 會先詢問，再自動執行全域更新。
95
+ After global install, both `apltk` and `apollo-toolkit` launch the same Apollo Toolkit CLI. Running `apltk` directly opens the interactive installer page, which first checks the npm registry for newer versions; if one is available, the CLI prompts and auto-updates globally.
96
96
 
97
- 除了安裝模式之外，`apltk` 也會把技能內常用腳本暴露成簡單 CLI 工具，例如：
97
+ Beyond installation mode, `apltk` also exposes common skill scripts as simple CLI tools, for example:
98
98
 
99
99
  ```bash
100
100
  apltk tools
@@ -105,6 +105,13 @@ apltk open-github-issue --help
105
105
  # Browse architecture HTML atlas and active-spec diffs
106
106
  apltk architecture # opens resources/project-architecture/index.html
107
107
  apltk architecture diff # paginates docs/plans/**/architecture_diff/ vs atlas
108
+
109
+ # CodeGraph code intelligence (powered by @colbymchenry/codegraph)
110
+ apltk codegraph init # Initialize code knowledge graph for the project
111
+ apltk codegraph status # Show index statistics (files, nodes, edges, languages)
112
+ apltk codegraph search <q> # Search code for symbols via FTS5
113
+ apltk codegraph survey # Survey directory with submodule and edge suggestions
114
+ apltk codegraph verify --spec <dir> # Verify spec overlay against actual code
108
115
  ```
109
116
 
110
117
  ### Non-interactive install
@@ -198,6 +205,12 @@ Compatibility note:
198
205
  - `update-project-html` is a local skill that depends on `init-project-html` for semantic rules and on the `apltk architecture` CLI to refresh the base atlas after code changes; for spec overlay diagrams use `spec-to-project-html` instead.
199
206
 
200
207
 
208
+ ## Code Intelligence: CodeGraph
209
+
210
+ The `apltk codegraph` subcommand system is built on [**@colbymchenry/codegraph**](https://github.com/colbymchenry/codegraph), a tree-sitter-backed code knowledge graph engine by Colt McHenry. CodeGraph parses source code into nodes (functions, classes) and edges (call relationships) in a local SQLite database, supporting FTS5 full-text search and structured queries.
211
+
212
+ Special thanks to Colt McHenry for this excellent work, enabling LLM agents to discover code structure deterministically instead of relying on grep/Read.
213
+
201
214
  ## Release publishing
202
215
 
203
216
  GitHub Releases can publish the npm package automatically through npm Trusted Publishing.
package/assets/spec/rg13-1780435029246/test-questions.json ADDED
@@ -0,0 +1 @@
1
+ [{"id":"Q001","userPrompt":"Write a spec for Q001","difficulty":"basic","projectContext":{"description":"Test project","files":[]},"scoringCriteria":{"outcome":{"weight":0.3,"checks":[{"id":"o1","description":"Complete task","passCondition":"Output exists"}]},"process":{"weight":0.3,"checks":[{"id":"p1","description":"Follow process","passCondition":"Steps done"}]},"style":{"weight":0.2,"checks":[{"id":"s1","description":"Correct format","passCondition":"Valid format"}]},"efficiency":{"weight":0.2,"checks":[{"id":"e1","description":"Efficient","passCondition":"Quick"}]}}},{"id":"Q002","userPrompt":"Write a spec for Q002","difficulty":"advanced","projectContext":{"description":"Test project","files":[]},"scoringCriteria":{"outcome":{"weight":0.3,"checks":[{"id":"o1","description":"Complete task","passCondition":"Output exists"}]},"process":{"weight":0.3,"checks":[{"id":"p1","description":"Follow process","passCondition":"Steps done"}]},"style":{"weight":0.2,"checks":[{"id":"s1","description":"Correct format","passCondition":"Valid format"}]},"efficiency":{"weight":0.2,"checks":[{"id":"e1","description":"Efficient","passCondition":"Quick"}]}}},{"id":"Q003","userPrompt":"Write a spec for Q003","difficulty":"edge","projectContext":{"description":"Test project","files":[]},"scoringCriteria":{"outcome":{"weight":0.3,"checks":[{"id":"o1","description":"Complete task","passCondition":"Output exists"}]},"process":{"weight":0.3,"checks":[{"id":"p1","description":"Follow process","passCondition":"Steps done"}]},"style":{"weight":0.2,"checks":[{"id":"s1","description":"Correct format","passCondition":"Valid format"}]},"efficiency":{"weight":0.2,"checks":[{"id":"e1","description":"Efficient","passCondition":"Quick"}]}}}]
package/assets/spec/rg13-1780468345132/test-questions.json ADDED
@@ -0,0 +1 @@
1
+ [{"id":"Q001","userPrompt":"Write a spec for Q001","difficulty":"basic","projectContext":{"description":"Test project","files":[]},"scoringCriteria":{"outcome":{"weight":0.3,"checks":[{"id":"o1","description":"Complete task","passCondition":"Output exists"}]},"process":{"weight":0.3,"checks":[{"id":"p1","description":"Follow process","passCondition":"Steps done"}]},"style":{"weight":0.2,"checks":[{"id":"s1","description":"Correct format","passCondition":"Valid format"}]},"efficiency":{"weight":0.2,"checks":[{"id":"e1","description":"Efficient","passCondition":"Quick"}]}}},{"id":"Q002","userPrompt":"Write a spec for Q002","difficulty":"advanced","projectContext":{"description":"Test project","files":[]},"scoringCriteria":{"outcome":{"weight":0.3,"checks":[{"id":"o1","description":"Complete task","passCondition":"Output exists"}]},"process":{"weight":0.3,"checks":[{"id":"p1","description":"Follow process","passCondition":"Steps done"}]},"style":{"weight":0.2,"checks":[{"id":"s1","description":"Correct format","passCondition":"Valid format"}]},"efficiency":{"weight":0.2,"checks":[{"id":"e1","description":"Efficient","passCondition":"Quick"}]}}},{"id":"Q003","userPrompt":"Write a spec for Q003","difficulty":"edge","projectContext":{"description":"Test project","files":[]},"scoringCriteria":{"outcome":{"weight":0.3,"checks":[{"id":"o1","description":"Complete task","passCondition":"Output exists"}]},"process":{"weight":0.3,"checks":[{"id":"p1","description":"Follow process","passCondition":"Steps done"}]},"style":{"weight":0.2,"checks":[{"id":"s1","description":"Correct format","passCondition":"Valid format"}]},"efficiency":{"weight":0.2,"checks":[{"id":"e1","description":"Efficient","passCondition":"Quick"}]}}}]
package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@laitszkin/apollo-toolkit",
3
- "version": "4.0.11",
3
+ "version": "4.1.0",
4
4
  "description": "Apollo Toolkit npm installer for managed skill copying across Codex, OpenClaw, and Trae.",
5
5
  "license": "MIT",
6
6
  "author": "LaiTszKin",
@@ -27,11 +27,11 @@
27
27
  "postbuild": "node scripts/rewrite-imports.mjs",
28
28
  "prepublishOnly": "npm run build",
29
29
  "watch": "tsc --build --watch",
30
- "test": "node --test",
30
+ "test": "node --experimental-test-module-mocks --test 'packages/**/*.test.js' 'test/**/*.test.js'",
31
31
  "test:ts": "node --test dist/test/"
32
32
  },
33
33
  "engines": {
34
- "node": ">=20.19.0"
34
+ "node": ">=22.5.0"
35
35
  },
36
36
  "publishConfig": {
37
37
  "access": "public",
package/packages/cli/dist/tool-registration.js CHANGED
@@ -16,6 +16,7 @@ const TOOL_MODULE_NAMES = [
16
16
  '../../tools/generate-storyboard-images/dist/index.js',
17
17
  '../../tools/enforce-video-aspect-ratio/dist/index.js',
18
18
  '../../tools/architecture/dist/index.js',
19
+ '@laitszkin/tool-codegraph',
19
20
  '../../tools/eval/dist/index.js',
20
21
  '../../tools/create-specs/dist/index.js',
21
22
  '../../tools/create-review-report/dist/index.js',
package/packages/cli/dist/tsconfig.tsbuildinfo CHANGED
@@ -1 +1 @@
1
- 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package/packages/cli/tool-registration.ts CHANGED
@@ -17,6 +17,7 @@ const TOOL_MODULE_NAMES = [
17
17
  '@laitszkin/tool-generate-storyboard-images',
18
18
  '@laitszkin/tool-enforce-video-aspect-ratio',
19
19
  '@laitszkin/tool-architecture',
20
+ '@laitszkin/tool-codegraph',
20
21
  '@laitszkin/tool-eval',
21
22
  '@laitszkin/tool-create-specs',
22
23
  '@laitszkin/tool-create-review-report',