@kodrunhq/claudefy 1.3.2 → 1.3.4

package/dist/commands/pull.js

@@ -9,6 +9,7 @@ import { Encryptor } from "../encryptor/encryptor.js";
 import { Merger } from "../merger/merger.js";
 import { BackupManager } from "../backup-manager/backup-manager.js";
 import { output } from "../output.js";
+import { STORE_CONFIG_DIR, STORE_UNKNOWN_DIR } from "../config/defaults.js";
 export class PullCommand {
     homeDir;
     claudeDir;
@@ -76,25 +77,29 @@ export class PullCommand {
             }
             process.exit(1);
         };
-        process.on("SIGINT", cleanup);
-        process.on("SIGTERM", cleanup);
+        process.once("SIGINT", cleanup);
+        process.once("SIGTERM", cleanup);
         try {
             // 4. Copy store to temp dir
-            const storeConfigDir = join(storePath, "config");
-            const storeUnknownDir = join(storePath, "unknown");
+            const storeConfigDir = join(storePath, STORE_CONFIG_DIR);
+            const storeUnknownDir = join(storePath, STORE_UNKNOWN_DIR);
             const tmpConfigDir = join(tmpDir, "config");
             const tmpUnknownDir = join(tmpDir, "unknown");
             if (existsSync(storeConfigDir))
                 await cp(storeConfigDir, tmpConfigDir, { recursive: true });
             if (existsSync(storeUnknownDir))
                 await cp(storeUnknownDir, tmpUnknownDir, { recursive: true });
+            // Security: remove any symlinks nested inside subdirectories
+            // (top-level symlinks are checked later, but cp() follows nested ones)
+            await this.removeNestedSymlinks(tmpConfigDir);
+            await this.removeNestedSymlinks(tmpUnknownDir);
             // 5. Decrypt any .age files in temp dir
             const encryptedFiles = await this.collectAgeFiles(tmpConfigDir, tmpUnknownDir);
             if (encryptedFiles.length > 0 && !options.skipEncryption) {
                 if (!options.passphrase) {
                     throw new Error("Encrypted files found but no passphrase available. Set CLAUDEFY_PASSPHRASE or store it in your OS keychain via 'claudefy init'.");
                 }
-                const encryptor = new Encryptor(options.passphrase);
+                const encryptor = new Encryptor(options.passphrase, config.backend.url);
                 if (existsSync(tmpConfigDir)) {
                     await encryptor.decryptDirectory(tmpConfigDir);
                 }
@@ -108,21 +113,41 @@ export class PullCommand {
             // settings.json
             const remoteSettingsPath = join(tmpConfigDir, "settings.json");
             if (existsSync(remoteSettingsPath)) {
-                const settings = JSON.parse(await readFile(remoteSettingsPath, "utf-8"));
+                let settings;
+                try {
+                    settings = JSON.parse(await readFile(remoteSettingsPath, "utf-8"));
+                }
+                catch (err) {
+                    throw new Error(`Failed to parse settings.json: ${err.message}`, {
+                        cause: err,
+                    });
+                }
                 const remapped = pathMapper.remapSettingsPaths(settings, this.claudeDir);
                 await writeFile(remoteSettingsPath, JSON.stringify(remapped, null, 2));
             }
             // installed_plugins.json
             const pluginsJsonPath = join(tmpConfigDir, "plugins", "installed_plugins.json");
             if (existsSync(pluginsJsonPath)) {
-                const plugins = JSON.parse(await readFile(pluginsJsonPath, "utf-8"));
+                let plugins;
+                try {
+                    plugins = JSON.parse(await readFile(pluginsJsonPath, "utf-8"));
+                }
+                catch (err) {
+                    throw new Error(`Failed to parse plugins/installed_plugins.json: ${err.message}`, { cause: err });
+                }
                 const remapped = pathMapper.remapPluginPaths(plugins, this.claudeDir);
                 await writeFile(pluginsJsonPath, JSON.stringify(remapped, null, 2));
             }
             // known_marketplaces.json
             const marketplacesPath = join(tmpConfigDir, "plugins", "known_marketplaces.json");
             if (existsSync(marketplacesPath)) {
-                const mp = JSON.parse(await readFile(marketplacesPath, "utf-8"));
+                let mp;
+                try {
+                    mp = JSON.parse(await readFile(marketplacesPath, "utf-8"));
+                }
+                catch (err) {
+                    throw new Error(`Failed to parse plugins/known_marketplaces.json: ${err.message}`, { cause: err });
+                }
                 const remapped = pathMapper.remapPluginPaths(mp, this.claudeDir);
                 await writeFile(marketplacesPath, JSON.stringify(remapped, null, 2));
             }
@@ -161,13 +186,41 @@ export class PullCommand {
             // 7a. Deep merge settings.json with hook filtering
             if (existsSync(remoteSettingsPath)) {
                 const localSettingsPath = join(this.claudeDir, "settings.json");
-                const remoteSettings = JSON.parse(await readFile(remoteSettingsPath, "utf-8"));
-                // Security: strip all hooks from remote to prevent code injection
-                if (remoteSettings && typeof remoteSettings === "object" && "hooks" in remoteSettings) {
-                    delete remoteSettings.hooks;
+                let remoteSettings;
+                try {
+                    remoteSettings = JSON.parse(await readFile(remoteSettingsPath, "utf-8"));
+                }
+                catch (err) {
+                    throw new Error(`Failed to parse remote settings.json: ${err.message}`, {
+                        cause: err,
+                    });
+                }
+                // Security: strip keys that can execute code or modify permissions
+                const DANGEROUS_KEYS = [
+                    "hooks",
+                    "mcpServers",
+                    "env",
+                    "permissions",
+                    "allowedTools",
+                    "apiKeyHelper",
+                ];
+                if (remoteSettings && typeof remoteSettings === "object") {
+                    for (const key of DANGEROUS_KEYS) {
+                        if (key in remoteSettings) {
+                            delete remoteSettings[key];
+                        }
+                    }
                 }
                 if (existsSync(localSettingsPath) && !result.overrideDetected) {
-                    const localSettings = JSON.parse(await readFile(localSettingsPath, "utf-8"));
+                    let localSettings;
+                    try {
+                        localSettings = JSON.parse(await readFile(localSettingsPath, "utf-8"));
+                    }
+                    catch (err) {
+                        throw new Error(`Failed to parse local settings.json: ${err.message}`, {
+                            cause: err,
+                        });
+                    }
                     const merged = merger.deepMergeJson(localSettings, remoteSettings);
                     await writeFile(localSettingsPath, JSON.stringify(merged, null, 2));
                 }
@@ -260,6 +313,21 @@ export class PullCommand {
             return null;
         }
     }
+    async removeNestedSymlinks(dir) {
+        if (!existsSync(dir))
+            return;
+        const entries = await readdir(dir, { withFileTypes: true });
+        for (const entry of entries) {
+            const fullPath = join(dir, entry.name);
+            if (entry.isSymbolicLink()) {
+                output.warn(`Removing nested symlink in store: ${entry.name}`);
+                await rm(fullPath);
+            }
+            else if (entry.isDirectory()) {
+                await this.removeNestedSymlinks(fullPath);
+            }
+        }
+    }
     async collectAgeFiles(...dirs) {
         const results = [];
         for (const dir of dirs) {

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package/dist/commands/push.d.ts

@@ -17,6 +17,6 @@ export declare class PushCommand {
     private normalizeContent;
     private syncItem;
     private syncDirectory;
+    private collectFilesRecursive;
     private removeDeleted;
-    private collectFiles;
 }

package/dist/commands/push.js

@@ -11,6 +11,7 @@ import { MachineRegistry } from "../machine-registry/machine-registry.js";
 import { Encryptor } from "../encryptor/encryptor.js";
 import { SecretScanner } from "../secret-scanner/scanner.js";
 import { output } from "../output.js";
+import { STORE_CONFIG_DIR, STORE_UNKNOWN_DIR, STORE_MANIFEST_FILE } from "../config/defaults.js";
 export class PushCommand {
     homeDir;
     claudeDir;
@@ -49,8 +50,8 @@ export class PushCommand {
             }
         }
         const storePath = gitAdapter.getStorePath();
-        const configDir = join(storePath, "config");
-        const unknownDir = join(storePath, "unknown");
+        const configDir = join(storePath, STORE_CONFIG_DIR);
+        const unknownDir = join(storePath, STORE_UNKNOWN_DIR);
         // 3. Build path mapper
         const links = await this.configManager.getLinks();
         const pathMapper = new PathMapper(links);
@@ -78,6 +79,7 @@ export class PushCommand {
         await this.removeDeleted(configDir, syncedConfigItems);
         await this.removeDeleted(unknownDir, syncedUnknownItems);
         // 7. Scan for secrets and encrypt files that contain them
+        const filesToEncrypt = new Set();
         if (!options.skipSecretScan && changedFiles.length > 0) {
             const scanner = new SecretScanner();
             const findings = await scanner.scanFiles(changedFiles);
@@ -86,30 +88,39 @@ export class PushCommand {
                     const details = findings.map((f) => `  ${f.file}:${f.line} [${f.pattern}]`).join("\n");
                     throw new Error(`Secret scan detected ${findings.length} potential secret(s):\n${details}\n\nEnable encryption or use --skip-secret-scan to bypass scanning.`);
                 }
-                if (!options.passphrase) {
-                    throw new Error("Secrets detected and encryption is enabled but no passphrase found. Set CLAUDEFY_PASSPHRASE or store it in your OS keychain via 'claudefy init'.");
+                for (const f of findings) {
+                    filesToEncrypt.add(f.file);
                 }
-                const encryptor = new Encryptor(options.passphrase);
-                const filesToEncrypt = new Set(findings.map((f) => f.file));
-                for (const filePath of filesToEncrypt) {
-                    if (existsSync(filePath) && !filePath.endsWith(".age")) {
-                        const ad = (filePath.startsWith(configDir)
-                            ? relative(configDir, filePath)
-                            : relative(unknownDir, filePath))
-                            .split(sep)
-                            .join("/");
-                        await encryptor.encryptFile(filePath, filePath + ".age", ad);
-                        await rm(filePath);
-                    }
-                }
-                if (!options.quiet) {
-                    output.info(`Encrypted ${filesToEncrypt.size} file(s) containing potential secrets.`);
+            }
+        }
+        // 7b. Always encrypt unknown-tier files when encryption is enabled
+        if (config.encryption.enabled && !options.skipEncryption) {
+            await this.collectFilesRecursive(unknownDir, filesToEncrypt);
+        }
+        // 7c. Perform encryption on all files that need it
+        if (filesToEncrypt.size > 0) {
+            if (!options.passphrase) {
+                throw new Error("Encryption is required but no passphrase found. Set CLAUDEFY_PASSPHRASE or ensure your passphrase is stored in your OS keychain (configured during 'claudefy init' or 'claudefy join').");
+            }
+            const encryptor = new Encryptor(options.passphrase, config.backend.url);
+            for (const filePath of filesToEncrypt) {
+                if (existsSync(filePath) && !filePath.endsWith(".age")) {
+                    const ad = (filePath.startsWith(configDir)
+                        ? relative(configDir, filePath)
+                        : relative(unknownDir, filePath))
+                        .split(sep)
+                        .join("/");
+                    await encryptor.encryptFile(filePath, filePath + ".age", ad);
+                    await rm(filePath);
                 }
             }
+            if (!options.quiet) {
+                output.info(`Encrypted ${filesToEncrypt.size} file(s).`);
+            }
         }
         // 8. Conditional manifest update
         const hasRealChanges = !(await gitAdapter.isClean());
-        const registry = new MachineRegistry(join(storePath, "manifest.json"));
+        const registry = new MachineRegistry(join(storePath, STORE_MANIFEST_FILE));
         await registry.conditionalRegister(config.machineId, hostname(), platform(), hasRealChanges);
         // 9. Commit and push with branch support
         const commitResult = await gitAdapter.commitAndPush(`sync: push from ${config.machineId}`, config.machineId);
@@ -156,13 +167,25 @@ export class PushCommand {
     }
     normalizeContent(itemName, text, pathMapper) {
         if (itemName === "settings.json") {
-            const parsed = JSON.parse(text);
+            let parsed;
+            try {
+                parsed = JSON.parse(text);
+            }
+            catch (err) {
+                throw new Error(`Failed to parse ${itemName}: ${err.message}`, { cause: err });
+            }
             const normalized = pathMapper.normalizeSettingsPaths(parsed, this.claudeDir);
             return JSON.stringify(normalized, null, 2);
         }
         if (itemName === "plugins/installed_plugins.json" ||
             itemName === "plugins/known_marketplaces.json") {
-            const parsed = JSON.parse(text);
+            let parsed;
+            try {
+                parsed = JSON.parse(text);
+            }
+            catch (err) {
+                throw new Error(`Failed to parse ${itemName}: ${err.message}`, { cause: err });
+            }
             const normalized = pathMapper.normalizePluginPaths(parsed, this.claudeDir);
             return JSON.stringify(normalized, null, 2);
         }
@@ -269,6 +292,20 @@ export class PushCommand {
             }
         }
     }
+    async collectFilesRecursive(dirPath, files) {
+        if (!existsSync(dirPath))
+            return;
+        const entries = await readdir(dirPath, { withFileTypes: true });
+        for (const entry of entries) {
+            const fullPath = join(dirPath, entry.name);
+            if (entry.isDirectory()) {
+                await this.collectFilesRecursive(fullPath, files);
+            }
+            else if (!entry.isSymbolicLink() && !entry.name.endsWith(".age")) {
+                files.add(fullPath);
+            }
+        }
+    }
     async removeDeleted(storeDir, currentItems) {
         if (!existsSync(storeDir))
             return;
@@ -281,21 +318,5 @@ export class PushCommand {
             }
         }
     }
-    async collectFiles(dirPath) {
-        if (!existsSync(dirPath))
-            return [];
-        const results = [];
-        const entries = await readdir(dirPath, { withFileTypes: true });
-        for (const entry of entries) {
-            const fullPath = join(dirPath, entry.name);
-            if (entry.isDirectory()) {
-                results.push(...(await this.collectFiles(fullPath)));
-            }
-            else if (!entry.isSymbolicLink()) {
-                results.push(fullPath);
-            }
-        }
-        return results;
-    }
 }
 //# sourceMappingURL=push.js.map

package/dist/commands/push.js.map

@@ -1 +1 @@
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package/dist/config/config-manager.d.ts

@@ -15,9 +15,7 @@ export declare class ConfigManager {
     removeLink(alias: string): Promise<void>;
     getLinks(): Promise<LinksConfig>;
     getSyncFilter(): Promise<SyncFilterConfig>;
-    setFilterOverride(name: string, tier: "allow" | "deny"): Promise<void>;
     isInitialized(): boolean;
-    getConfigDir(): string;
     private saveConfig;
     private saveLinks;
     private saveSyncFilter;

package/dist/config/config-manager.js

@@ -35,11 +35,25 @@ export class ConfigManager {
         return config;
     }
     async load() {
-        const raw = await readFile(join(this.configDir, CONFIG_FILE), "utf-8");
-        return JSON.parse(raw);
+        const path = join(this.configDir, CONFIG_FILE);
+        const raw = await readFile(path, "utf-8");
+        try {
+            return JSON.parse(raw);
+        }
+        catch (err) {
+            throw new Error(`Corrupt config file "${path}": ${err.message}. Delete and re-run 'claudefy init'.`, { cause: err });
+        }
     }
     async set(key, value) {
         const FORBIDDEN_KEYS = ["__proto__", "prototype", "constructor"];
+        const isUnsafeObject = (target) => {
+            if (target === null || target === undefined)
+                return true;
+            if (typeof target !== "object")
+                return true;
+            // Never allow writing through or onto Object.prototype
+            return target === Object.prototype;
+        };
         const parts = key.split(".");
         for (const part of parts) {
             if (FORBIDDEN_KEYS.includes(part)) {
@@ -48,14 +62,29 @@ export class ConfigManager {
         }
         const config = await this.load();
         let obj = config;
+        // Prevent traversing into polluted objects
+        if (isUnsafeObject(obj)) {
+            throw new Error("Configuration root object is invalid or unsafe");
+        }
         for (let i = 0; i < parts.length - 1; i++) {
-            const next = obj[parts[i]];
-            if (next === undefined || next === null || typeof next !== "object") {
-                throw new Error(`Invalid config key: "${key}" — "${parts[i]}" is not an object`);
+            const segment = parts[i];
+            if (FORBIDDEN_KEYS.includes(segment)) {
+                throw new Error(`Forbidden config key segment: "${segment}"`);
+            }
+            const next = obj[segment];
+            if (isUnsafeObject(next)) {
+                throw new Error(`Invalid config key: "${key}" — "${segment}" is not a safe object`);
             }
             obj = next;
         }
-        obj[parts[parts.length - 1]] = value;
+        const lastSegment = parts[parts.length - 1];
+        if (FORBIDDEN_KEYS.includes(lastSegment)) {
+            throw new Error(`Forbidden config key segment: "${lastSegment}"`);
+        }
+        if (isUnsafeObject(obj)) {
+            throw new Error("Cannot assign to unsafe configuration object");
+        }
+        obj[lastSegment] = value;
         await this.saveConfig(config);
     }
     async addLink(alias, localPath, meta) {
@@ -78,33 +107,30 @@ export class ConfigManager {
         if (!existsSync(path))
             return {};
         const raw = await readFile(path, "utf-8");
-        return JSON.parse(raw);
+        try {
+            return JSON.parse(raw);
+        }
+        catch (err) {
+            throw new Error(`Corrupt links file "${path}": ${err.message}`, { cause: err });
+        }
     }
     async getSyncFilter() {
         const path = join(this.configDir, SYNC_FILTER_FILE);
         if (!existsSync(path))
             return { ...DEFAULT_SYNC_FILTER };
         const raw = await readFile(path, "utf-8");
-        return JSON.parse(raw);
-    }
-    async setFilterOverride(name, tier) {
-        const filter = await this.getSyncFilter();
-        filter.denylist = filter.denylist.filter((d) => d !== name);
-        filter.allowlist = filter.allowlist.filter((a) => a !== name);
-        if (tier === "allow") {
-            filter.allowlist.push(name);
+        try {
+            return JSON.parse(raw);
         }
-        else {
-            filter.denylist.push(name);
+        catch (err) {
+            throw new Error(`Corrupt sync filter file "${path}": ${err.message}`, {
+                cause: err,
+            });
         }
-        await this.saveSyncFilter(filter);
     }
     isInitialized() {
         return existsSync(join(this.configDir, CONFIG_FILE));
     }
-    getConfigDir() {
-        return this.configDir;
-    }
     async saveConfig(config) {
         await writeFile(join(this.configDir, CONFIG_FILE), JSON.stringify(config, null, 2));
     }

package/dist/config/config-manager.js.map

@@ -1 +1 @@
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package/dist/config/defaults.d.ts

@@ -1,5 +1,8 @@
 import type { SyncFilterConfig } from "./types.js";
 export declare const DEFAULT_SYNC_FILTER: SyncFilterConfig;
+export declare const STORE_CONFIG_DIR = "config";
+export declare const STORE_UNKNOWN_DIR = "unknown";
+export declare const STORE_MANIFEST_FILE = "manifest.json";
 export declare const CLAUDEFY_DIR = ".claudefy";
 export declare const CONFIG_FILE = "config.json";
 export declare const LINKS_FILE = "links.json";

package/dist/config/defaults.js

@@ -25,6 +25,9 @@ export const DEFAULT_SYNC_FILTER = {
         "mcp-needs-auth-cache.json",
     ],
 };
+export const STORE_CONFIG_DIR = "config";
+export const STORE_UNKNOWN_DIR = "unknown";
+export const STORE_MANIFEST_FILE = "manifest.json";
 export const CLAUDEFY_DIR = ".claudefy";
 export const CONFIG_FILE = "config.json";
 export const LINKS_FILE = "links.json";

package/dist/config/defaults.js.map

@@ -1 +1 @@
-{"version":3,"file":"defaults.js","sourceRoot":"","sources":["../../src/config/defaults.ts"],"names":[],"mappings":"AAEA,MAAM,CAAC,MAAM,mBAAmB,GAAqB;IACnD,SAAS,EAAE;QACT,UAAU;QACV,QAAQ;QACR,QAAQ;QACR,OAAO;QACP,OAAO;QACP,OAAO;QACP,SAAS;QACT,cAAc;QACd,UAAU;QACV,eAAe;QACf,eAAe;QACf,cAAc;KACf;IACD,QAAQ,EAAE;QACR,OAAO;QACP,SAAS;QACT,cAAc;QACd,iBAAiB;QACjB,aAAa;QACb,aAAa;QACb,OAAO;QACP,mBAAmB;QACnB,2BAA2B;KAC5B;CACF,CAAC;AAEF,MAAM,CAAC,MAAM,YAAY,GAAG,WAAW,CAAC;AACxC,MAAM,CAAC,MAAM,WAAW,GAAG,aAAa,CAAC;AACzC,MAAM,CAAC,MAAM,UAAU,GAAG,YAAY,CAAC;AACvC,MAAM,CAAC,MAAM,gBAAgB,GAAG,kBAAkB,CAAC;AACnD,MAAM,CAAC,MAAM,eAAe,GAAG,YAAY,CAAC"}
+{"version":3,"file":"defaults.js","sourceRoot":"","sources":["../../src/config/defaults.ts"],"names":[],"mappings":"AAEA,MAAM,CAAC,MAAM,mBAAmB,GAAqB;IACnD,SAAS,EAAE;QACT,UAAU;QACV,QAAQ;QACR,QAAQ;QACR,OAAO;QACP,OAAO;QACP,OAAO;QACP,SAAS;QACT,cAAc;QACd,UAAU;QACV,eAAe;QACf,eAAe;QACf,cAAc;KACf;IACD,QAAQ,EAAE;QACR,OAAO;QACP,SAAS;QACT,cAAc;QACd,iBAAiB;QACjB,aAAa;QACb,aAAa;QACb,OAAO;QACP,mBAAmB;QACnB,2BAA2B;KAC5B;CACF,CAAC;AAEF,MAAM,CAAC,MAAM,gBAAgB,GAAG,QAAQ,CAAC;AACzC,MAAM,CAAC,MAAM,iBAAiB,GAAG,SAAS,CAAC;AAC3C,MAAM,CAAC,MAAM,mBAAmB,GAAG,eAAe,CAAC;AAEnD,MAAM,CAAC,MAAM,YAAY,GAAG,WAAW,CAAC;AACxC,MAAM,CAAC,MAAM,WAAW,GAAG,aAAa,CAAC;AACzC,MAAM,CAAC,MAAM,UAAU,GAAG,YAAY,CAAC;AACvC,MAAM,CAAC,MAAM,gBAAgB,GAAG,kBAAkB,CAAC;AACnD,MAAM,CAAC,MAAM,eAAe,GAAG,YAAY,CAAC"}

package/dist/encryptor/encryptor.d.ts

@@ -1,7 +1,7 @@
 export declare class Encryptor {
     private lineEncryptor;
     private fileEncryptor;
-    constructor(passphrase: string);
+    constructor(passphrase: string, repoSalt: string);
     private isJsonlFile;
     private isOriginallyJsonl;
     encryptFile(inputPath: string, outputPath: string, ad: string): Promise<void>;