@knowledgine/core 0.1.0 → 0.2.0

package/dist/config/config-loader.d.ts

@@ -0,0 +1,15 @@
+import type { KnowledgineConfig } from "../config.js";
+export interface RcConfig {
+    semantic?: boolean;
+    [key: string]: unknown;
+}
+/**
+ * Load knowledgine configuration from RC file and environment variables.
+ * Priority: env var > RC file > defaults (embedding.enabled = false)
+ */
+export declare function loadConfig(rootPath: string): KnowledgineConfig;
+/**
+ * Write a .knowledginerc.json config file to the project root.
+ */
+export declare function writeRcConfig(rootPath: string, config: RcConfig): void;
+//# sourceMappingURL=config-loader.d.ts.map

package/dist/config/config-loader.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"config-loader.d.ts","sourceRoot":"","sources":["../../src/config/config-loader.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,cAAc,CAAC;AAEtD,MAAM,WAAW,QAAQ;IACvB,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;CACxB;AAED;;;GAGG;AACH,wBAAgB,UAAU,CAAC,QAAQ,EAAE,MAAM,GAAG,iBAAiB,CAgB9D;AAqBD;;GAEG;AACH,wBAAgB,aAAa,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,IAAI,CAGtE"}

package/dist/config/config-loader.js

@@ -0,0 +1,46 @@
+import { readFileSync, existsSync, writeFileSync } from "fs";
+import { resolve } from "path";
+import { parse as parseYaml } from "yaml";
+import { defineConfig } from "../config.js";
+/**
+ * Load knowledgine configuration from RC file and environment variables.
+ * Priority: env var > RC file > defaults (embedding.enabled = false)
+ */
+export function loadConfig(rootPath) {
+    const rcConfig = loadRcFile(rootPath);
+    // Environment variable override
+    const envSemantic = process.env["KNOWLEDGINE_SEMANTIC"];
+    const semanticEnabled = envSemantic === "true" || envSemantic === "1" || rcConfig?.semantic === true;
+    return defineConfig({
+        rootPath,
+        embedding: {
+            modelName: "all-MiniLM-L6-v2",
+            dimensions: 384,
+            enabled: semanticEnabled,
+        },
+    });
+}
+function loadRcFile(rootPath) {
+    const jsonPath = resolve(rootPath, ".knowledginerc.json");
+    const ymlPath = resolve(rootPath, ".knowledginerc.yml");
+    try {
+        if (existsSync(jsonPath)) {
+            return JSON.parse(readFileSync(jsonPath, "utf-8"));
+        }
+        if (existsSync(ymlPath)) {
+            return parseYaml(readFileSync(ymlPath, "utf-8"));
+        }
+    }
+    catch (error) {
+        console.error(`Warning: Failed to parse config file: ${error instanceof Error ? error.message : String(error)}`);
+    }
+    return null;
+}
+/**
+ * Write a .knowledginerc.json config file to the project root.
+ */
+export function writeRcConfig(rootPath, config) {
+    const rcPath = resolve(rootPath, ".knowledginerc.json");
+    writeFileSync(rcPath, JSON.stringify(config, null, 2) + "\n");
+}
+//# sourceMappingURL=config-loader.js.map

package/dist/config/config-loader.js.map

@@ -0,0 +1 @@
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package/dist/config.js

@@ -11,7 +11,7 @@ const DEFAULT_CONFIG = {
     embedding: {
         modelName: "all-MiniLM-L6-v2",
         dimensions: 384,
-        enabled: true,
+        enabled: false,
     },
     search: {
         defaultMode: "keyword",

package/dist/config.js.map

@@ -1 +1 @@
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+{"version":3,"file":"config.js","sourceRoot":"","sources":["../src/config.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAC;AAiC/B,MAAM,cAAc,GAAsB;IACxC,QAAQ,EAAE,GAAG;IACb,MAAM,EAAE,EAAE;IACV,QAAQ,EAAE;QACR,OAAO,EAAE,CAAC,SAAS,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,CAAC;KACrD;IACD,WAAW,EAAE;QACX,cAAc,EAAE,EAAE;KACnB;IACD,SAAS,EAAE;QACT,SAAS,EAAE,kBAAkB;QAC7B,UAAU,EAAE,GAAG;QACf,OAAO,EAAE,KAAK;KACf;IACD,MAAM,EAAE;QACN,WAAW,EAAE,SAAS;QACtB,WAAW,EAAE,GAAG;KACjB;CACF,CAAC;AAEF,MAAM,UAAU,YAAY,CAAC,UAAsC,EAAE;IACnE,MAAM,QAAQ,GAAG,OAAO,CAAC,QAAQ,IAAI,cAAc,CAAC,QAAQ,CAAC;IAC7D,MAAM,MAAM,GAAG,OAAO,CAAC,MAAM,IAAI,OAAO,CAAC,QAAQ,EAAE,cAAc,EAAE,cAAc,CAAC,CAAC;IAEnF,OAAO;QACL,GAAG,cAAc;QACjB,GAAG,OAAO;QACV,QAAQ;QACR,MAAM;QACN,QAAQ,EAAE;YACR,GAAG,cAAc,CAAC,QAAQ;YAC1B,GAAG,OAAO,CAAC,QAAQ;SACpB;QACD,WAAW,EAAE;YACX,GAAG,cAAc,CAAC,WAAW;YAC7B,GAAG,OAAO,CAAC,WAAW;SACvB;QACD,SAAS,EAAE;YACT,GAAG,cAAc,CAAC,SAAS;YAC3B,GAAG,OAAO,CAAC,SAAS;SACrB;QACD,MAAM,EAAE;YACN,GAAG,cAAc,CAAC,MAAM;YACxB,GAAG,OAAO,CAAC,MAAM;SAClB;KACF,CAAC;AACJ,CAAC"}

package/dist/embedding/model-downloader.d.ts

@@ -0,0 +1,34 @@
+/**
+ * Embedding model downloader.
+ * Downloads all-MiniLM-L6-v2 ONNX model files from HuggingFace.
+ *
+ * Features:
+ * - Atomic download (.tmp + rename)
+ * - Redirect limit (max 5)
+ * - Timeout (5 minutes)
+ * - Progress callback
+ * - Skip existing files (0-byte treated as corrupt)
+ * - SIGINT cleanup
+ */
+import type { ModelManager } from "./model-manager.js";
+export interface DownloadProgress {
+    file: string;
+    downloaded: number;
+    total: number | null;
+}
+export interface DownloadOptions {
+    onProgress?: (progress: DownloadProgress) => void;
+    onFileComplete?: (file: string) => void;
+    timeoutMs?: number;
+    maxRedirects?: number;
+}
+export interface ModelFile {
+    url: string;
+    dest: string;
+}
+export declare const MODEL_FILES: ModelFile[];
+export declare function downloadModel(modelManager: ModelManager, options?: DownloadOptions): Promise<{
+    downloaded: string[];
+    skipped: string[];
+}>;
+//# sourceMappingURL=model-downloader.d.ts.map

package/dist/embedding/model-downloader.d.ts.map

@@ -0,0 +1 @@
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package/dist/embedding/model-downloader.js

@@ -0,0 +1,149 @@
+/**
+ * Embedding model downloader.
+ * Downloads all-MiniLM-L6-v2 ONNX model files from HuggingFace.
+ *
+ * Features:
+ * - Atomic download (.tmp + rename)
+ * - Redirect limit (max 5)
+ * - Timeout (5 minutes)
+ * - Progress callback
+ * - Skip existing files (0-byte treated as corrupt)
+ * - SIGINT cleanup
+ */
+import { mkdirSync, renameSync, unlinkSync, existsSync, statSync, createWriteStream } from "fs";
+import { get as httpsGet } from "https";
+import { get as httpGet } from "http";
+import { pipeline } from "stream/promises";
+export const MODEL_FILES = [
+    {
+        url: "https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2/resolve/main/tokenizer.json",
+        dest: "tokenizer.json",
+    },
+    {
+        url: "https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2/resolve/main/config.json",
+        dest: "config.json",
+    },
+    {
+        url: "https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2/resolve/main/onnx/model_quantized.onnx",
+        dest: "model.onnx",
+    },
+];
+function isExistingAndValid(filePath) {
+    if (!existsSync(filePath))
+        return false;
+    const stat = statSync(filePath);
+    return stat.size > 0;
+}
+function downloadFile(url, destPath, options, fileName, redirectCount = 0) {
+    const maxRedirects = options.maxRedirects ?? 5;
+    const timeoutMs = options.timeoutMs ?? 300_000; // 5 minutes
+    if (redirectCount > maxRedirects) {
+        return Promise.reject(new Error(`Too many redirects (${maxRedirects}) for ${url}`));
+    }
+    return new Promise((resolve, reject) => {
+        const tmpPath = destPath + ".tmp";
+        let aborted = false;
+        const cleanup = () => {
+            try {
+                if (existsSync(tmpPath))
+                    unlinkSync(tmpPath);
+            }
+            catch {
+                // ignore cleanup errors
+            }
+        };
+        const onSigint = () => {
+            aborted = true;
+            cleanup();
+        };
+        process.on("SIGINT", onSigint);
+        const getFunc = url.startsWith("http://") ? httpGet : httpsGet;
+        const timer = setTimeout(() => {
+            aborted = true;
+            req.destroy();
+            cleanup();
+            reject(new Error(`Download timeout (${timeoutMs}ms) for ${fileName}`));
+        }, timeoutMs);
+        const req = getFunc(url, (response) => {
+            if (aborted)
+                return;
+            // Handle redirects (301, 302, 307, 308)
+            if (response.statusCode === 301 || response.statusCode === 302 || response.statusCode === 307 || response.statusCode === 308) {
+                clearTimeout(timer);
+                process.removeListener("SIGINT", onSigint);
+                const location = response.headers.location;
+                if (!location) {
+                    reject(new Error(`Redirect without location header for ${url}`));
+                    return;
+                }
+                downloadFile(location, destPath, options, fileName, redirectCount + 1)
+                    .then(resolve)
+                    .catch(reject);
+                return;
+            }
+            if (response.statusCode !== 200) {
+                clearTimeout(timer);
+                process.removeListener("SIGINT", onSigint);
+                reject(new Error(`HTTP ${response.statusCode} for ${fileName}`));
+                return;
+            }
+            const totalSize = response.headers["content-length"]
+                ? parseInt(response.headers["content-length"], 10)
+                : null;
+            let downloaded = 0;
+            response.on("data", (chunk) => {
+                downloaded += chunk.length;
+                options.onProgress?.({
+                    file: fileName,
+                    downloaded,
+                    total: totalSize,
+                });
+            });
+            const fileStream = createWriteStream(tmpPath);
+            pipeline(response, fileStream)
+                .then(() => {
+                clearTimeout(timer);
+                process.removeListener("SIGINT", onSigint);
+                if (aborted) {
+                    cleanup();
+                    reject(new Error("Download aborted"));
+                    return;
+                }
+                // Atomic rename
+                renameSync(tmpPath, destPath);
+                options.onFileComplete?.(fileName);
+                resolve();
+            })
+                .catch((err) => {
+                clearTimeout(timer);
+                process.removeListener("SIGINT", onSigint);
+                cleanup();
+                reject(err);
+            });
+        });
+        req.on("error", (err) => {
+            clearTimeout(timer);
+            process.removeListener("SIGINT", onSigint);
+            cleanup();
+            reject(err);
+        });
+    });
+}
+export async function downloadModel(modelManager, options = {}) {
+    const modelDir = modelManager.getModelDir();
+    mkdirSync(modelDir, { recursive: true });
+    const downloaded = [];
+    const skipped = [];
+    for (const file of MODEL_FILES) {
+        const destPath = `${modelDir}/${file.dest}`;
+        if (isExistingAndValid(destPath)) {
+            skipped.push(file.dest);
+            options.onFileComplete?.(file.dest);
+            continue;
+        }
+        await downloadFile(file.url, destPath, options, file.dest);
+        downloaded.push(file.dest);
+    }
+    return { downloaded, skipped };
+}
+//# sourceMappingURL=model-downloader.js.map

package/dist/embedding/model-downloader.js.map

@@ -0,0 +1 @@
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package/dist/embedding/onnx-embedding-provider.js

@@ -15,7 +15,7 @@ export class OnnxEmbeddingProvider {
         if (this.session)
             return this.session;
         if (!this.modelManager.isModelAvailable(this.modelName)) {
-            throw new EmbeddingNotAvailableError(`Model "${this.modelName}" not found. Run the download script first: node scripts/download-model.js`);
+            throw new EmbeddingNotAvailableError(`Model "${this.modelName}" not found. Run 'knowledgine init' to download the model automatically.`);
         }
         try {
             const ort = await import("onnxruntime-node");
@@ -30,7 +30,7 @@ export class OnnxEmbeddingProvider {
         if (this.tokenizer)
             return this.tokenizer;
         if (!this.modelManager.isModelAvailable(this.modelName)) {
-            throw new EmbeddingNotAvailableError(`Model "${this.modelName}" not found. Run the download script first: node scripts/download-model.js`);
+            throw new EmbeddingNotAvailableError(`Model "${this.modelName}" not found. Run 'knowledgine init' to download the model automatically.`);
         }
         this.tokenizer = new WordPieceTokenizer(this.modelManager.getTokenizerPath(this.modelName));
         return this.tokenizer;

package/dist/embedding/onnx-embedding-provider.js.map

@@ -1 +1 @@
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package/dist/feedback/feedback-learner.d.ts

@@ -0,0 +1,29 @@
+import { FeedbackRepository } from "./feedback-repository.js";
+export interface TypeOverride {
+    name: string;
+    fromType: string;
+    toType: string;
+}
+export interface WhitelistEntry {
+    name: string;
+    type: string;
+}
+export interface ExtractionRules {
+    version: number;
+    updatedAt: string;
+    stopWords: {
+        added: string[];
+    };
+    typeOverrides: TypeOverride[];
+    entityBlacklist: string[];
+    entityWhitelist: WhitelistEntry[];
+}
+export declare class FeedbackLearner {
+    private feedbackRepository;
+    private rulesPath;
+    constructor(feedbackRepository: FeedbackRepository, rulesPath: string);
+    applyFeedback(feedbackId: number): void;
+    loadRules(): ExtractionRules;
+    private saveRules;
+}
+//# sourceMappingURL=feedback-learner.d.ts.map

package/dist/feedback/feedback-learner.d.ts.map

@@ -0,0 +1 @@
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package/dist/feedback/feedback-learner.js

@@ -0,0 +1,88 @@
+import { readFileSync, writeFileSync, renameSync } from "fs";
+import { join, dirname } from "path";
+import { FeedbackRepository } from "./feedback-repository.js";
+function createEmptyRules() {
+    return {
+        version: 1,
+        updatedAt: new Date().toISOString(),
+        stopWords: { added: [] },
+        typeOverrides: [],
+        entityBlacklist: [],
+        entityWhitelist: [],
+    };
+}
+export class FeedbackLearner {
+    feedbackRepository;
+    rulesPath;
+    constructor(feedbackRepository, rulesPath) {
+        this.feedbackRepository = feedbackRepository;
+        this.rulesPath = rulesPath;
+    }
+    applyFeedback(feedbackId) {
+        const feedback = this.feedbackRepository.getById(feedbackId);
+        if (!feedback) {
+            throw new Error(`Feedback record not found: id=${feedbackId}`);
+        }
+        const rules = this.loadRules();
+        switch (feedback.errorType) {
+            case "false_positive":
+                if (!rules.entityBlacklist.includes(feedback.entityName)) {
+                    rules.entityBlacklist.push(feedback.entityName);
+                }
+                break;
+            case "wrong_type":
+                if (!feedback.entityType || !feedback.correctType) {
+                    throw new Error("wrong_type feedback requires both entityType and correctType");
+                }
+                // Check for existing override for same entity name
+                const existingIdx = rules.typeOverrides.findIndex((o) => o.name === feedback.entityName);
+                const override = {
+                    name: feedback.entityName,
+                    fromType: feedback.entityType,
+                    toType: feedback.correctType,
+                };
+                if (existingIdx >= 0) {
+                    rules.typeOverrides[existingIdx] = override;
+                }
+                else {
+                    rules.typeOverrides.push(override);
+                }
+                break;
+            case "missed_entity": {
+                const entityType = feedback.correctType ?? feedback.entityType ?? "technology";
+                // Check for existing whitelist entry for same entity name
+                const existingWlIdx = rules.entityWhitelist.findIndex((w) => w.name === feedback.entityName);
+                const entry = {
+                    name: feedback.entityName,
+                    type: entityType,
+                };
+                if (existingWlIdx >= 0) {
+                    rules.entityWhitelist[existingWlIdx] = entry;
+                }
+                else {
+                    rules.entityWhitelist.push(entry);
+                }
+                break;
+            }
+        }
+        rules.updatedAt = new Date().toISOString();
+        this.saveRules(rules);
+        this.feedbackRepository.updateStatus(feedbackId, "applied");
+    }
+    loadRules() {
+        try {
+            const content = readFileSync(this.rulesPath, "utf-8");
+            return JSON.parse(content);
+        }
+        catch {
+            return createEmptyRules();
+        }
+    }
+    saveRules(rules) {
+        const dir = dirname(this.rulesPath);
+        const tmpPath = join(dir, `.extraction-rules.tmp.${process.pid}.json`);
+        writeFileSync(tmpPath, JSON.stringify(rules, null, 2), "utf-8");
+        renameSync(tmpPath, this.rulesPath);
+    }
+}
+//# sourceMappingURL=feedback-learner.js.map

package/dist/feedback/feedback-learner.js.map

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package/dist/feedback/feedback-repository.d.ts

@@ -0,0 +1,41 @@
+import type Database from "better-sqlite3";
+import type { FeedbackErrorType, FeedbackStatus } from "../types.js";
+export interface CreateFeedbackInput {
+    entityName: string;
+    errorType: FeedbackErrorType;
+    entityType?: string;
+    correctType?: string;
+    noteId?: number;
+    details?: string;
+}
+export interface FeedbackRecord {
+    id: number;
+    entityName: string;
+    entityType: string | null;
+    errorType: FeedbackErrorType;
+    correctType: string | null;
+    noteId: number | null;
+    details: string | null;
+    status: FeedbackStatus;
+    createdAt: string;
+    appliedAt: string | null;
+}
+export declare class FeedbackRepository {
+    private db;
+    constructor(db: Database.Database);
+    create(input: CreateFeedbackInput): FeedbackRecord;
+    getById(id: number): FeedbackRecord | undefined;
+    list(options?: {
+        status?: string;
+        limit?: number;
+    }): FeedbackRecord[];
+    updateStatus(id: number, status: string): void;
+    delete(id: number): void;
+    getStats(): {
+        total: number;
+        pending: number;
+        applied: number;
+        dismissed: number;
+    };
+}
+//# sourceMappingURL=feedback-repository.d.ts.map

package/dist/feedback/feedback-repository.d.ts.map

@@ -0,0 +1 @@
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package/dist/feedback/feedback-repository.js

@@ -0,0 +1,94 @@
+const VALID_ERROR_TYPES = ["false_positive", "wrong_type", "missed_entity"];
+const VALID_STATUSES = ["pending", "applied", "dismissed"];
+function rowToRecord(row) {
+    return {
+        id: row.id,
+        entityName: row.entity_name,
+        entityType: row.entity_type,
+        errorType: row.error_type,
+        correctType: row.correct_type,
+        noteId: row.note_id,
+        details: row.details,
+        status: row.status,
+        createdAt: row.created_at,
+        appliedAt: row.applied_at,
+    };
+}
+export class FeedbackRepository {
+    db;
+    constructor(db) {
+        this.db = db;
+    }
+    create(input) {
+        if (!VALID_ERROR_TYPES.includes(input.errorType)) {
+            throw new Error(`Invalid error_type: "${input.errorType}". Must be one of: ${VALID_ERROR_TYPES.join(", ")}`);
+        }
+        const stmt = this.db.prepare(`
+      INSERT INTO extraction_feedback (entity_name, entity_type, error_type, correct_type, note_id, details)
+      VALUES (?, ?, ?, ?, ?, ?)
+    `);
+        const info = stmt.run(input.entityName, input.entityType ?? null, input.errorType, input.correctType ?? null, input.noteId ?? null, input.details ?? null);
+        return this.getById(Number(info.lastInsertRowid));
+    }
+    getById(id) {
+        const row = this.db
+            .prepare("SELECT * FROM extraction_feedback WHERE id = ?")
+            .get(id);
+        return row ? rowToRecord(row) : undefined;
+    }
+    list(options) {
+        const conditions = [];
+        const params = [];
+        if (options?.status) {
+            if (!VALID_STATUSES.includes(options.status)) {
+                throw new Error(`Invalid status: "${options.status}". Must be one of: ${VALID_STATUSES.join(", ")}`);
+            }
+            conditions.push("status = ?");
+            params.push(options.status);
+        }
+        const where = conditions.length > 0 ? `WHERE ${conditions.join(" AND ")}` : "";
+        const limit = options?.limit ?? 100;
+        params.push(limit);
+        const rows = this.db
+            .prepare(`SELECT * FROM extraction_feedback ${where} ORDER BY created_at DESC LIMIT ?`)
+            .all(...params);
+        return rows.map(rowToRecord);
+    }
+    updateStatus(id, status) {
+        if (!VALID_STATUSES.includes(status)) {
+            throw new Error(`Invalid status: "${status}". Must be one of: ${VALID_STATUSES.join(", ")}`);
+        }
+        const appliedAt = status === "applied" ? new Date().toISOString() : null;
+        const info = this.db
+            .prepare("UPDATE extraction_feedback SET status = ?, applied_at = ? WHERE id = ?")
+            .run(status, appliedAt, id);
+        if (info.changes === 0) {
+            throw new Error(`Feedback record not found: id=${id}`);
+        }
+    }
+    delete(id) {
+        const info = this.db
+            .prepare("DELETE FROM extraction_feedback WHERE id = ?")
+            .run(id);
+        if (info.changes === 0) {
+            throw new Error(`Feedback record not found: id=${id}`);
+        }
+    }
+    getStats() {
+        const rows = this.db
+            .prepare(`SELECT status, COUNT(*) as count FROM extraction_feedback GROUP BY status`)
+            .all();
+        const stats = { total: 0, pending: 0, applied: 0, dismissed: 0 };
+        for (const row of rows) {
+            stats.total += row.count;
+            if (row.status === "pending")
+                stats.pending = row.count;
+            else if (row.status === "applied")
+                stats.applied = row.count;
+            else if (row.status === "dismissed")
+                stats.dismissed = row.count;
+        }
+        return stats;
+    }
+}
+//# sourceMappingURL=feedback-repository.js.map

package/dist/feedback/feedback-repository.js.map

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package/dist/feedback/index.d.ts

@@ -0,0 +1,5 @@
+export { FeedbackRepository } from "./feedback-repository.js";
+export type { CreateFeedbackInput, FeedbackRecord } from "./feedback-repository.js";
+export { FeedbackLearner } from "./feedback-learner.js";
+export type { ExtractionRules, TypeOverride, WhitelistEntry } from "./feedback-learner.js";
+//# sourceMappingURL=index.d.ts.map

package/dist/feedback/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/feedback/index.js

@@ -0,0 +1,3 @@
+export { FeedbackRepository } from "./feedback-repository.js";
+export { FeedbackLearner } from "./feedback-learner.js";
+//# sourceMappingURL=index.js.map

package/dist/feedback/index.js.map

@@ -0,0 +1 @@
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