@knowledgine/cli 0.2.0 → 0.2.1

package/dist/commands/search.js

@@ -1,14 +1,11 @@
 import { resolve } from "path";
 import { existsSync } from "fs";
-import { loadConfig, createDatabase, Migrator, KnowledgeRepository, KnowledgeSearcher, GraphRepository, KnowledgeService, ALL_MIGRATIONS, } from "@knowledgine/core";
+import { loadConfig, resolveDefaultPath, createDatabase, loadSqliteVecExtension, Migrator, KnowledgeRepository, GraphRepository, KnowledgeService, ALL_MIGRATIONS, OnnxEmbeddingProvider, ModelManager, DEFAULT_MODEL_NAME, } from "@knowledgine/core";
 import { getDemoNotesPath } from "./demo.js";
 import { formatSearchResults as formatToolSearchResults, formatRelatedNotes, } from "../lib/formatter.js";
+import { colors, symbols } from "../lib/ui/index.js";
 export async function searchCommand(query, options) {
-    const rootPath = options.demo
-        ? getDemoNotesPath()
-        : options.path
-            ? resolve(options.path)
-            : resolve(process.cwd());
+    const rootPath = options.demo ? getDemoNotesPath() : resolveDefaultPath(options.path);
     const knowledgineDir = resolve(rootPath, ".knowledgine");
     if (!existsSync(knowledgineDir)) {
         console.error(options.demo
@@ -20,6 +17,9 @@ export async function searchCommand(query, options) {
     const config = loadConfig(rootPath);
     const db = createDatabase(config.dbPath);
     try {
+        if (config.embedding?.enabled) {
+            await loadSqliteVecExtension(db);
+        }
         new Migrator(db, ALL_MIGRATIONS).migrate();
         const repository = new KnowledgeRepository(db);
         const graphRepository = new GraphRepository(db);
@@ -54,15 +54,38 @@ export async function searchCommand(query, options) {
             }
             return;
         }
+        // Initialize embedding provider if semantic is enabled and requested
+        let embeddingProvider;
+        if (mode !== "keyword" && config.embedding?.enabled) {
+            const modelManager = new ModelManager();
+            if (modelManager.isModelAvailable()) {
+                embeddingProvider = new OnnxEmbeddingProvider(DEFAULT_MODEL_NAME, modelManager);
+            }
+        }
         // 通常の検索モード
-        const service = new KnowledgeService({ repository, rootPath, graphRepository });
+        const service = new KnowledgeService({
+            repository,
+            rootPath,
+            graphRepository,
+            embeddingProvider,
+        });
         const result = await service.search({ query, limit, mode });
+        const warnings = result.results.flatMap((r) => r.matchReason.filter((m) => m.startsWith("Warning:")));
+        if (warnings.length > 0) {
+            console.error(`\n${symbols.warning} ${colors.warning(warnings[0])}\n`);
+        }
+        // セマンティック検索が要求されたが利用不可の場合の警告
+        if (mode !== "keyword" && (!config.embedding?.enabled || !embeddingProvider)) {
+            console.error(`${symbols.warning} ${colors.warning("Semantic search is not configured. Falling back to FTS5.")}`);
+            console.error(`${symbols.arrow} ${colors.hint("Run 'knowledgine upgrade --semantic' to enable semantic search.")}`);
+            console.error("");
+        }
         if (format === "json") {
             console.log(JSON.stringify({ ok: true, command: "search", result }));
         }
         else if (format === "table") {
             if (result.results.length === 0) {
-                console.error(`No results for "${query}".`);
+                console.error(`${symbols.info} ${colors.hint(`No results for "${query}".`)}`);
             }
             else {
                 console.error(formatToolSearchResults(result.results, "table"));
@@ -84,10 +107,10 @@ export async function searchCommand(query, options) {
 /** 後方互換のためのレガシー出力形式 */
 function formatLegacySearchResults(query, results) {
     if (results.length === 0) {
-        console.error(`No results for "${query}".`);
+        console.error(`${symbols.info} ${colors.hint(`No results for "${query}".`)}`);
         return;
     }
-    console.error(`Results for "${query}" (${results.length} matches):`);
+    console.error(colors.bold(`Results for "${query}" (${results.length} matches):`));
     console.error("");
     for (let i = 0; i < results.length; i++) {
         const r = results[i];
@@ -100,10 +123,10 @@ function formatLegacySearchResults(query, results) {
 /** @deprecated Use searchCommand with format option instead */
 export function formatSearchResults(query, results) {
     if (results.length === 0) {
-        console.error(`No results for "${query}".`);
+        console.error(`${symbols.info} ${colors.hint(`No results for "${query}".`)}`);
         return;
     }
-    console.error(`Results for "${query}" (${results.length} matches):`);
+    console.error(colors.bold(`Results for "${query}" (${results.length} matches):`));
     console.error("");
     for (let i = 0; i < results.length; i++) {
         const r = results[i];

package/dist/commands/search.js.map

@@ -1 +1 @@
-{"version":3,"file":"search.js","sourceRoot":"","sources":["../../src/commands/search.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAC;AAC/B,OAAO,EAAE,UAAU,EAAE,MAAM,IAAI,CAAC;AAChC,OAAO,EACL,UAAU,EACV,cAAc,EACd,QAAQ,EACR,mBAAmB,EACnB,iBAAiB,EACjB,eAAe,EACf,gBAAgB,EAChB,cAAc,GACf,MAAM,mBAAmB,CAAC;AAC3B,OAAO,EAAE,gBAAgB,EAAE,MAAM,WAAW,CAAC;AAC7C,OAAO,EACL,mBAAmB,IAAI,uBAAuB,EAC9C,kBAAkB,GACnB,MAAM,qBAAqB,CAAC;AAa7B,MAAM,CAAC,KAAK,UAAU,aAAa,CACjC,KAAa,EACb,OAA6B;IAE7B,MAAM,QAAQ,GAAG,OAAO,CAAC,IAAI;QAC3B,CAAC,CAAC,gBAAgB,EAAE;QACpB,CAAC,CAAC,OAAO,CAAC,IAAI;YACZ,CAAC,CAAC,OAAO,CAAC,OAAO,CAAC,IAAI,CAAC;YACvB,CAAC,CAAC,OAAO,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC,CAAC;IAE7B,MAAM,cAAc,GAAG,OAAO,CAAC,QAAQ,EAAE,cAAc,CAAC,CAAC;IACzD,IAAI,CAAC,UAAU,CAAC,cAAc,CAAC,EAAE,CAAC;QAChC,OAAO,CAAC,KAAK,CACX,OAAO,CAAC,IAAI;YACV,CAAC,CAAC,4DAA4D;YAC9D,CAAC,CAAC,6DAA6D,CAClE,CAAC;QACF,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;QACrB,OAAO;IACT,CAAC;IAED,MAAM,MAAM,GAAG,UAAU,CAAC,QAAQ,CAAC,CAAC;IACpC,MAAM,EAAE,GAAG,cAAc,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;IAEzC,IAAI,CAAC;QACH,IAAI,QAAQ,CAAC,EAAE,EAAE,cAAc,CAAC,CAAC,OAAO,EAAE,CAAC;QAE3C,MAAM,UAAU,GAAG,IAAI,mBAAmB,CAAC,EAAE,CAAC,CAAC;QAC/C,MAAM,eAAe,GAAG,IAAI,eAAe,CAAC,EAAE,CAAC,CAAC;QAEhD,MAAM,IAAI,GAAI,OAAO,CAAC,IAA0C,IAAI,SAAS,CAAC;QAC9E,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,IAAI,EAAE,CAAC;QAClC,MAAM,MAAM,GAAI,OAAO,CAAC,MAAuB,IAAI,OAAO,CAAC;QAE3D,8CAA8C;QAC9C,IAAI,OAAO,CAAC,OAAO,IAAI,OAAO,CAAC,WAAW,EAAE,CAAC;YAC3C,MAAM,OAAO,GAAG,IAAI,gBAAgB,CAAC,EAAE,UAAU,EAAE,QAAQ,EAAE,eAAe,EAAE,CAAC,CAAC;YAChF,MAAM,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;YAC3E,IAAI,OAAO,CAAC,OAAO,IAAI,CAAC,KAAK,CAAC,MAAO,CAAC,IAAI,MAAO,GAAG,CAAC,CAAC,EAAE,CAAC;gBACvD,OAAO,CAAC,KAAK,CAAC,uDAAuD,CAAC,CAAC;gBACvE,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;gBACrB,OAAO;YACT,CAAC;YACD,IAAI,CAAC;gBACH,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,WAAW,CAAC;oBACvC,MAAM;oBACN,QAAQ,EAAE,OAAO,CAAC,WAAW;oBAC7B,KAAK;iBACN,CAAC,CAAC;gBACH,IAAI,MAAM,KAAK,MAAM,EAAE,CAAC;oBACtB,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,EAAE,EAAE,EAAE,IAAI,EAAE,OAAO,EAAE,QAAQ,EAAE,MAAM,EAAE,CAAC,CAAC,CAAC;gBACvE,CAAC;qBAAM,CAAC;oBACN,OAAO,CAAC,KAAK,CAAC,kBAAkB,CAAC,MAAM,EAAE,MAAM,KAAK,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC;gBACpF,CAAC;YACH,CAAC;YAAC,OAAO,KAAK,EAAE,CAAC;gBACf,OAAO,CAAC,KAAK,CAAC,UAAU,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;gBAClF,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;YACvB,CAAC;YACD,OAAO;QACT,CAAC;QAED,WAAW;QACX,MAAM,OAAO,GAAG,IAAI,gBAAgB,CAAC,EAAE,UAAU,EAAE,QAAQ,EAAE,eAAe,EAAE,CAAC,CAAC;QAChF,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC;QAE5D,IAAI,MAAM,KAAK,MAAM,EAAE,CAAC;YACtB,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,EAAE,EAAE,EAAE,IAAI,EAAE,OAAO,EAAE,QAAQ,EAAE,MAAM,EAAE,CAAC,CAAC,CAAC;QACvE,CAAC;aAAM,IAAI,MAAM,KAAK,OAAO,EAAE,CAAC;YAC9B,IAAI,MAAM,CAAC,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;gBAChC,OAAO,CAAC,KAAK,CAAC,mBAAmB,KAAK,IAAI,CAAC,CAAC;YAC9C,CAAC;iBAAM,CAAC;gBACN,OAAO,CAAC,KAAK,CAAC,uBAAuB,CAAC,MAAM,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC;YAClE,CAAC;QACH,CAAC;aAAM,CAAC;YACN,8BAA8B;YAC9B,yBAAyB,CAAC,KAAK,EAAE,MAAM,CAAC,OAAO,CAAC,CAAC;QACnD,CAAC;IACH,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,OAAO,CAAC,KAAK,CAAC,UAAU,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;QAClF,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;IACvB,CAAC;YAAS,CAAC;QACT,EAAE,CAAC,KAAK,EAAE,CAAC;IACb,CAAC;AACH,CAAC;AAED,uBAAuB;AACvB,SAAS,yBAAyB,CAChC,KAAa,EACb,OAAkE;IAElE,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzB,OAAO,CAAC,KAAK,CAAC,mBAAmB,KAAK,IAAI,CAAC,CAAC;QAC5C,OAAO;IACT,CAAC;IAED,OAAO,CAAC,KAAK,CAAC,gBAAgB,KAAK,MAAM,OAAO,CAAC,MAAM,YAAY,CAAC,CAAC;IACrE,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IAElB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QACxC,MAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QACrB,MAAM,KAAK,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;QACjC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,GAAG,CAAC,MAAM,KAAK,KAAK,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAC;QACtD,OAAO,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC;QACjC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACpB,CAAC;AACH,CAAC;AAED,+DAA+D;AAC/D,MAAM,UAAU,mBAAmB,CACjC,KAAa,EACb,OAAgD;IAEhD,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzB,OAAO,CAAC,KAAK,CAAC,mBAAmB,KAAK,IAAI,CAAC,CAAC;QAC5C,OAAO;IACT,CAAC;IAED,OAAO,CAAC,KAAK,CAAC,gBAAgB,KAAK,MAAM,OAAO,CAAC,MAAM,YAAY,CAAC,CAAC;IACrE,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IAElB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QACxC,MAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QACrB,MAAM,KAAK,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;QACjC,MAAM,IAAI,GAAG,CAAC,CAAC,IAAuD,CAAC;QACvE,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,GAAG,CAAC,MAAM,KAAK,KAAK,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC;QAC1D,OAAO,CAAC,KAAK,CAAC,QAAQ,IAAI,CAAC,KAAK,EAAE,CAAC,CAAC;QACpC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACpB,CAAC;AACH,CAAC"}
+{"version":3,"file":"search.js","sourceRoot":"","sources":["../../src/commands/search.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAC;AAC/B,OAAO,EAAE,UAAU,EAAE,MAAM,IAAI,CAAC;AAChC,OAAO,EACL,UAAU,EACV,kBAAkB,EAClB,cAAc,EACd,sBAAsB,EACtB,QAAQ,EACR,mBAAmB,EACnB,eAAe,EACf,gBAAgB,EAChB,cAAc,EACd,qBAAqB,EACrB,YAAY,EACZ,kBAAkB,GACnB,MAAM,mBAAmB,CAAC;AAE3B,OAAO,EAAE,gBAAgB,EAAE,MAAM,WAAW,CAAC;AAC7C,OAAO,EACL,mBAAmB,IAAI,uBAAuB,EAC9C,kBAAkB,GACnB,MAAM,qBAAqB,CAAC;AAE7B,OAAO,EAAE,MAAM,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAC;AAYrD,MAAM,CAAC,KAAK,UAAU,aAAa,CAAC,KAAa,EAAE,OAA6B;IAC9E,MAAM,QAAQ,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,gBAAgB,EAAE,CAAC,CAAC,CAAC,kBAAkB,CAAC,OAAO,CAAC,IAAI,CAAC,CAAC;IAEtF,MAAM,cAAc,GAAG,OAAO,CAAC,QAAQ,EAAE,cAAc,CAAC,CAAC;IACzD,IAAI,CAAC,UAAU,CAAC,cAAc,CAAC,EAAE,CAAC;QAChC,OAAO,CAAC,KAAK,CACX,OAAO,CAAC,IAAI;YACV,CAAC,CAAC,4DAA4D;YAC9D,CAAC,CAAC,6DAA6D,CAClE,CAAC;QACF,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;QACrB,OAAO;IACT,CAAC;IAED,MAAM,MAAM,GAAG,UAAU,CAAC,QAAQ,CAAC,CAAC;IACpC,MAAM,EAAE,GAAG,cAAc,CAAC,MAAM,CAAC,MAAM,CAAC,CAAC;IAEzC,IAAI,CAAC;QACH,IAAI,MAAM,CAAC,SAAS,EAAE,OAAO,EAAE,CAAC;YAC9B,MAAM,sBAAsB,CAAC,EAAE,CAAC,CAAC;QACnC,CAAC;QACD,IAAI,QAAQ,CAAC,EAAE,EAAE,cAAc,CAAC,CAAC,OAAO,EAAE,CAAC;QAE3C,MAAM,UAAU,GAAG,IAAI,mBAAmB,CAAC,EAAE,CAAC,CAAC;QAC/C,MAAM,eAAe,GAAG,IAAI,eAAe,CAAC,EAAE,CAAC,CAAC;QAEhD,MAAM,IAAI,GAAI,OAAO,CAAC,IAA0C,IAAI,SAAS,CAAC;QAC9E,MAAM,KAAK,GAAG,OAAO,CAAC,KAAK,IAAI,EAAE,CAAC;QAClC,MAAM,MAAM,GAAI,OAAO,CAAC,MAAuB,IAAI,OAAO,CAAC;QAE3D,8CAA8C;QAC9C,IAAI,OAAO,CAAC,OAAO,IAAI,OAAO,CAAC,WAAW,EAAE,CAAC;YAC3C,MAAM,OAAO,GAAG,IAAI,gBAAgB,CAAC,EAAE,UAAU,EAAE,QAAQ,EAAE,eAAe,EAAE,CAAC,CAAC;YAChF,MAAM,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,QAAQ,CAAC,OAAO,CAAC,OAAO,EAAE,EAAE,CAAC,CAAC,CAAC,CAAC,SAAS,CAAC;YAC3E,IAAI,OAAO,CAAC,OAAO,IAAI,CAAC,KAAK,CAAC,MAAO,CAAC,IAAI,MAAO,GAAG,CAAC,CAAC,EAAE,CAAC;gBACvD,OAAO,CAAC,KAAK,CAAC,uDAAuD,CAAC,CAAC;gBACvE,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;gBACrB,OAAO;YACT,CAAC;YACD,IAAI,CAAC;gBACH,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,WAAW,CAAC;oBACvC,MAAM;oBACN,QAAQ,EAAE,OAAO,CAAC,WAAW;oBAC7B,KAAK;iBACN,CAAC,CAAC;gBACH,IAAI,MAAM,KAAK,MAAM,EAAE,CAAC;oBACtB,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,EAAE,EAAE,EAAE,IAAI,EAAE,OAAO,EAAE,QAAQ,EAAE,MAAM,EAAE,CAAC,CAAC,CAAC;gBACvE,CAAC;qBAAM,CAAC;oBACN,OAAO,CAAC,KAAK,CAAC,kBAAkB,CAAC,MAAM,EAAE,MAAM,KAAK,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC;gBACpF,CAAC;YACH,CAAC;YAAC,OAAO,KAAK,EAAE,CAAC;gBACf,OAAO,CAAC,KAAK,CAAC,UAAU,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;gBAClF,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;YACvB,CAAC;YACD,OAAO;QACT,CAAC;QAED,qEAAqE;QACrE,IAAI,iBAAgD,CAAC;QACrD,IAAI,IAAI,KAAK,SAAS,IAAI,MAAM,CAAC,SAAS,EAAE,OAAO,EAAE,CAAC;YACpD,MAAM,YAAY,GAAG,IAAI,YAAY,EAAE,CAAC;YACxC,IAAI,YAAY,CAAC,gBAAgB,EAAE,EAAE,CAAC;gBACpC,iBAAiB,GAAG,IAAI,qBAAqB,CAAC,kBAAkB,EAAE,YAAY,CAAC,CAAC;YAClF,CAAC;QACH,CAAC;QAED,WAAW;QACX,MAAM,OAAO,GAAG,IAAI,gBAAgB,CAAC;YACnC,UAAU;YACV,QAAQ;YACR,eAAe;YACf,iBAAiB;SAClB,CAAC,CAAC;QACH,MAAM,MAAM,GAAG,MAAM,OAAO,CAAC,MAAM,CAAC,EAAE,KAAK,EAAE,KAAK,EAAE,IAAI,EAAE,CAAC,CAAC;QAE5D,MAAM,QAAQ,GAAG,MAAM,CAAC,OAAO,CAAC,OAAO,CAAC,CAAC,CAAC,EAAE,EAAE,CAC5C,CAAC,CAAC,WAAW,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,UAAU,CAAC,UAAU,CAAC,CAAC,CACtD,CAAC;QACF,IAAI,QAAQ,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;YACxB,OAAO,CAAC,KAAK,CAAC,KAAK,OAAO,CAAC,OAAO,IAAI,MAAM,CAAC,OAAO,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,CAAC;QACzE,CAAC;QAED,6BAA6B;QAC7B,IAAI,IAAI,KAAK,SAAS,IAAI,CAAC,CAAC,MAAM,CAAC,SAAS,EAAE,OAAO,IAAI,CAAC,iBAAiB,CAAC,EAAE,CAAC;YAC7E,OAAO,CAAC,KAAK,CACX,GAAG,OAAO,CAAC,OAAO,IAAI,MAAM,CAAC,OAAO,CAAC,0DAA0D,CAAC,EAAE,CACnG,CAAC;YACF,OAAO,CAAC,KAAK,CACX,GAAG,OAAO,CAAC,KAAK,IAAI,MAAM,CAAC,IAAI,CAAC,iEAAiE,CAAC,EAAE,CACrG,CAAC;YACF,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;QACpB,CAAC;QAED,IAAI,MAAM,KAAK,MAAM,EAAE,CAAC;YACtB,OAAO,CAAC,GAAG,CAAC,IAAI,CAAC,SAAS,CAAC,EAAE,EAAE,EAAE,IAAI,EAAE,OAAO,EAAE,QAAQ,EAAE,MAAM,EAAE,CAAC,CAAC,CAAC;QACvE,CAAC;aAAM,IAAI,MAAM,KAAK,OAAO,EAAE,CAAC;YAC9B,IAAI,MAAM,CAAC,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;gBAChC,OAAO,CAAC,KAAK,CAAC,GAAG,OAAO,CAAC,IAAI,IAAI,MAAM,CAAC,IAAI,CAAC,mBAAmB,KAAK,IAAI,CAAC,EAAE,CAAC,CAAC;YAChF,CAAC;iBAAM,CAAC;gBACN,OAAO,CAAC,KAAK,CAAC,uBAAuB,CAAC,MAAM,CAAC,OAAO,EAAE,OAAO,CAAC,CAAC,CAAC;YAClE,CAAC;QACH,CAAC;aAAM,CAAC;YACN,8BAA8B;YAC9B,yBAAyB,CAAC,KAAK,EAAE,MAAM,CAAC,OAAO,CAAC,CAAC;QACnD,CAAC;IACH,CAAC;IAAC,OAAO,KAAK,EAAE,CAAC;QACf,OAAO,CAAC,KAAK,CAAC,UAAU,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;QAClF,OAAO,CAAC,QAAQ,GAAG,CAAC,CAAC;IACvB,CAAC;YAAS,CAAC;QACT,EAAE,CAAC,KAAK,EAAE,CAAC;IACb,CAAC;AACH,CAAC;AAED,uBAAuB;AACvB,SAAS,yBAAyB,CAChC,KAAa,EACb,OAAkE;IAElE,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzB,OAAO,CAAC,KAAK,CAAC,GAAG,OAAO,CAAC,IAAI,IAAI,MAAM,CAAC,IAAI,CAAC,mBAAmB,KAAK,IAAI,CAAC,EAAE,CAAC,CAAC;QAC9E,OAAO;IACT,CAAC;IAED,OAAO,CAAC,KAAK,CAAC,MAAM,CAAC,IAAI,CAAC,gBAAgB,KAAK,MAAM,OAAO,CAAC,MAAM,YAAY,CAAC,CAAC,CAAC;IAClF,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IAElB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QACxC,MAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QACrB,MAAM,KAAK,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;QACjC,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,GAAG,CAAC,MAAM,KAAK,KAAK,CAAC,CAAC,QAAQ,EAAE,CAAC,CAAC;QACtD,OAAO,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC;QACjC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACpB,CAAC;AACH,CAAC;AAED,+DAA+D;AAC/D,MAAM,UAAU,mBAAmB,CACjC,KAAa,EACb,OAAgD;IAEhD,IAAI,OAAO,CAAC,MAAM,KAAK,CAAC,EAAE,CAAC;QACzB,OAAO,CAAC,KAAK,CAAC,GAAG,OAAO,CAAC,IAAI,IAAI,MAAM,CAAC,IAAI,CAAC,mBAAmB,KAAK,IAAI,CAAC,EAAE,CAAC,CAAC;QAC9E,OAAO;IACT,CAAC;IAED,OAAO,CAAC,KAAK,CAAC,MAAM,CAAC,IAAI,CAAC,gBAAgB,KAAK,MAAM,OAAO,CAAC,MAAM,YAAY,CAAC,CAAC,CAAC;IAClF,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IAElB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,OAAO,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE,CAAC;QACxC,MAAM,CAAC,GAAG,OAAO,CAAC,CAAC,CAAC,CAAC;QACrB,MAAM,KAAK,GAAG,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,CAAC;QACjC,MAAM,IAAI,GAAG,CAAC,CAAC,IAAuD,CAAC;QACvE,OAAO,CAAC,KAAK,CAAC,KAAK,CAAC,GAAG,CAAC,MAAM,KAAK,KAAK,IAAI,CAAC,SAAS,EAAE,CAAC,CAAC;QAC1D,OAAO,CAAC,KAAK,CAAC,QAAQ,IAAI,CAAC,KAAK,EAAE,CAAC,CAAC;QACpC,OAAO,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACpB,CAAC;AACH,CAAC"}

package/dist/commands/setup.d.ts

@@ -4,11 +4,54 @@ export interface SetupOptions {
     dryRun?: boolean;
     write?: boolean;
 }
-interface SetupIO {
-    input: NodeJS.ReadableStream;
-    output: NodeJS.WritableStream;
+export declare const TARGETS: readonly [{
+    readonly value: "claude-desktop";
+    readonly label: "Claude Desktop";
+    readonly description: "Anthropic's desktop app";
+}, {
+    readonly value: "cursor";
+    readonly label: "Cursor";
+    readonly description: "AI-first code editor";
+}, {
+    readonly value: "claude-code";
+    readonly label: "Claude Code";
+    readonly description: "CLI agent for developers";
+}, {
+    readonly value: "windsurf";
+    readonly label: "Windsurf";
+    readonly description: "Codeium's AI IDE";
+}, {
+    readonly value: "vscode";
+    readonly label: "VS Code";
+    readonly description: "GitHub Copilot MCP";
+}, {
+    readonly value: "zed";
+    readonly label: "Zed";
+    readonly description: "High-performance editor";
+}, {
+    readonly value: "codex";
+    readonly label: "Codex CLI";
+    readonly description: "OpenAI's coding agent";
+}, {
+    readonly value: "github-copilot";
+    readonly label: "GitHub Copilot CLI";
+    readonly description: "AI pair programmer CLI";
+}, {
+    readonly value: "gemini";
+    readonly label: "Gemini CLI";
+    readonly description: "Google's AI coding agent";
+}, {
+    readonly value: "antigravity";
+    readonly label: "Antigravity";
+    readonly description: "Google's AI development platform";
+}];
+export declare function getConfigPath(target: string): string;
+export declare function getTargetLabel(target: string): string;
+export declare const PROJECT_CONFIG_SUPPORT: Record<string, (projectRoot: string) => string>;
+export interface SetupIO {
+    input?: NodeJS.ReadableStream;
+    output?: NodeJS.WritableStream;
     isTTY: boolean;
 }
-export declare function setupCommand(options: SetupOptions, io?: SetupIO): Promise<void>;
-export {};
+export declare function setupCommand(options: SetupOptions, ioOrCommand?: SetupIO | unknown): Promise<void>;
 //# sourceMappingURL=setup.d.ts.map

package/dist/commands/setup.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"setup.d.ts","sourceRoot":"","sources":["../../src/commands/setup.ts"],"names":[],"mappings":"AAKA,MAAM,WAAW,YAAY;IAC3B,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAmFD,UAAU,OAAO;IACf,KAAK,EAAE,MAAM,CAAC,cAAc,CAAC;IAC7B,MAAM,EAAE,MAAM,CAAC,cAAc,CAAC;IAC9B,KAAK,EAAE,OAAO,CAAC;CAChB;AAsCD,wBAAsB,YAAY,CAChC,OAAO,EAAE,YAAY,EACrB,EAAE,CAAC,EAAE,OAAO,GACX,OAAO,CAAC,IAAI,CAAC,CAyEf"}
+{"version":3,"file":"setup.d.ts","sourceRoot":"","sources":["../../src/commands/setup.ts"],"names":[],"mappings":"AAQA,MAAM,WAAW,YAAY;IAC3B,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,IAAI,CAAC,EAAE,MAAM,CAAC;IACd,MAAM,CAAC,EAAE,OAAO,CAAC;IACjB,KAAK,CAAC,EAAE,OAAO,CAAC;CACjB;AAWD,eAAO,MAAM,OAAO;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;EAWV,CAAC;AAOX,wBAAgB,aAAa,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,CA+CpD;AAED,wBAAgB,cAAc,CAAC,MAAM,EAAE,MAAM,GAAG,MAAM,CAGrD;AAgHD,eAAO,MAAM,sBAAsB,EAAE,MAAM,CAAC,MAAM,EAAE,CAAC,WAAW,EAAE,MAAM,KAAK,MAAM,CAMlF,CAAC;AAiHF,MAAM,WAAW,OAAO;IACtB,KAAK,CAAC,EAAE,MAAM,CAAC,cAAc,CAAC;IAC9B,MAAM,CAAC,EAAE,MAAM,CAAC,cAAc,CAAC;IAC/B,KAAK,EAAE,OAAO,CAAC;CAChB;AAED,wBAAsB,YAAY,CAAC,OAAO,EAAE,YAAY,EAAE,WAAW,CAAC,EAAE,OAAO,GAAG,OAAO,GAAG,OAAO,CAAC,IAAI,CAAC,CAqFxG"}

package/dist/commands/setup.js

@@ -1,41 +1,72 @@
 import { resolve, join } from "path";
 import { existsSync, readFileSync, writeFileSync, mkdirSync, copyFileSync } from "fs";
 import { homedir } from "os";
-import { createInterface } from "readline";
-function getClaudeDesktopConfigPath() {
-    switch (process.platform) {
-        case "darwin":
-            return join(homedir(), "Library", "Application Support", "Claude", "claude_desktop_config.json");
-        case "linux":
-            return join(homedir(), ".config", "claude", "claude_desktop_config.json");
-        case "win32":
-            return join(process.env["APPDATA"] ?? join(homedir(), "AppData", "Roaming"), "Claude", "claude_desktop_config.json");
-        default:
-            return join(homedir(), ".config", "claude", "claude_desktop_config.json");
-    }
-}
-function getCursorConfigPath() {
-    return join(homedir(), ".cursor", "mcp.json");
-}
-function getConfigPath(target) {
+import { resolveDefaultPath } from "@knowledgine/core";
+import { createBox, colors, symbols } from "../lib/ui/index.js";
+import * as p from "@clack/prompts";
+import * as TOML from "smol-toml";
+export const TARGETS = [
+    { value: "claude-desktop", label: "Claude Desktop", description: "Anthropic's desktop app" },
+    { value: "cursor", label: "Cursor", description: "AI-first code editor" },
+    { value: "claude-code", label: "Claude Code", description: "CLI agent for developers" },
+    { value: "windsurf", label: "Windsurf", description: "Codeium's AI IDE" },
+    { value: "vscode", label: "VS Code", description: "GitHub Copilot MCP" },
+    { value: "zed", label: "Zed", description: "High-performance editor" },
+    { value: "codex", label: "Codex CLI", description: "OpenAI's coding agent" },
+    { value: "github-copilot", label: "GitHub Copilot CLI", description: "AI pair programmer CLI" },
+    { value: "gemini", label: "Gemini CLI", description: "Google's AI coding agent" },
+    { value: "antigravity", label: "Antigravity", description: "Google's AI development platform" },
+];
+// Zed uses "context_servers" key instead of "mcpServers"
+const ZED_MCP_KEY = "context_servers";
+export function getConfigPath(target) {
+    const home = homedir();
+    const appdata = process.env["APPDATA"] ?? join(home, "AppData", "Roaming");
     switch (target) {
         case "claude-desktop":
-            return getClaudeDesktopConfigPath();
+            switch (process.platform) {
+                case "darwin":
+                    return join(home, "Library", "Application Support", "Claude", "claude_desktop_config.json");
+                case "win32":
+                    return join(appdata, "Claude", "claude_desktop_config.json");
+                default:
+                    return join(home, ".config", "claude", "claude_desktop_config.json");
+            }
         case "cursor":
-            return getCursorConfigPath();
+            return join(home, ".cursor", "mcp.json");
+        case "claude-code":
+            return join(home, ".claude.json");
+        case "windsurf":
+            if (process.platform === "win32") {
+                return join(appdata, "Codeium", "Windsurf", "mcp_config.json");
+            }
+            return join(home, ".codeium", "windsurf", "mcp_config.json");
+        case "vscode":
+            switch (process.platform) {
+                case "darwin":
+                    return join(home, "Library", "Application Support", "Code", "User", "settings.json");
+                case "win32":
+                    return join(appdata, "Code", "User", "settings.json");
+                default:
+                    return join(home, ".config", "Code", "User", "settings.json");
+            }
+        case "zed":
+            return join(home, ".config", "zed", "settings.json");
+        case "codex":
+            return join(home, ".codex", "config.toml");
+        case "github-copilot":
+            return join(home, ".copilot", "mcp-config.json");
+        case "gemini":
+            return join(home, ".gemini", "settings.json");
+        case "antigravity":
+            return join(home, ".gemini", "antigravity", "mcp_config.json");
         default:
-            throw new Error(`Unknown target: ${target}. Supported: claude-desktop, cursor`);
+            throw new Error(`Unknown target: ${target}. Supported: ${TARGETS.map((t) => t.value).join(", ")}`);
     }
 }
-function getTargetLabel(target) {
-    switch (target) {
-        case "claude-desktop":
-            return "Claude Desktop";
-        case "cursor":
-            return "Cursor";
-        default:
-            return target;
-    }
+export function getTargetLabel(target) {
+    const found = TARGETS.find((t) => t.value === target);
+    return found ? found.label : target;
 }
 function buildMcpConfig(rootPath) {
     return {
@@ -43,17 +74,42 @@ function buildMcpConfig(rootPath) {
         args: ["-y", "@knowledgine/cli", "start", "--path", rootPath],
     };
 }
-function readExistingConfig(configPath) {
+function isTomlConfig(configPath) {
+    return configPath.endsWith(".toml");
+}
+/** Get the MCP servers key name for a given target */
+function getMcpKey(target) {
+    if (target === "zed")
+        return ZED_MCP_KEY;
+    return "mcpServers";
+}
+function readExistingConfig(configPath, target) {
     if (!existsSync(configPath)) {
         return {};
     }
-    const raw = readFileSync(configPath, "utf-8");
+    const raw = readFileSync(configPath, "utf-8").trim();
+    if (!raw) {
+        return {};
+    }
     try {
-        return JSON.parse(raw);
+        if (isTomlConfig(configPath)) {
+            const parsed = TOML.parse(raw);
+            return {
+                mcpServers: (parsed["mcp_servers"] ?? {}),
+            };
+        }
+        const parsed = JSON.parse(raw);
+        const mcpKey = getMcpKey(target ?? "");
+        // For tools that embed MCP in a larger settings file (Zed, VS Code)
+        if (parsed[mcpKey]) {
+            return { mcpServers: parsed[mcpKey] };
+        }
+        return parsed;
     }
     catch {
+        const format = isTomlConfig(configPath) ? "TOML" : "JSON";
         throw new Error(`Failed to parse existing config: ${configPath}\n` +
-            `The file contains invalid JSON. Fix it manually or remove it before running setup.`);
+            `The file contains invalid ${format}. Fix it manually or remove it before running setup.`);
     }
 }
 function mergeConfig(existing, rootPath) {
@@ -66,102 +122,210 @@ function mergeConfig(existing, rootPath) {
         },
     };
 }
-function getDefaultIO() {
-    return {
-        input: process.stdin,
-        output: process.stderr,
-        isTTY: process.stderr.isTTY ?? false,
-    };
+function writeConfig(configPath, config, target) {
+    const configDir = resolve(configPath, "..");
+    if (!existsSync(configDir)) {
+        mkdirSync(configDir, { recursive: true });
+    }
+    if (existsSync(configPath)) {
+        copyFileSync(configPath, configPath + ".bak");
+    }
+    if (isTomlConfig(configPath)) {
+        // TOML: read existing, merge mcp_servers, write back
+        let existing = {};
+        if (existsSync(configPath)) {
+            try {
+                existing = TOML.parse(readFileSync(configPath, "utf-8"));
+            }
+            catch { /* start fresh */ }
+        }
+        existing["mcp_servers"] = {
+            ...(existing["mcp_servers"] ?? {}),
+            knowledgine: config.mcpServers?.["knowledgine"] ?? buildMcpConfig(""),
+        };
+        writeFileSync(configPath, TOML.stringify(existing) + "\n", "utf-8");
+    }
+    else {
+        const mcpKey = getMcpKey(target ?? "");
+        const isEmbeddedSettings = mcpKey !== "mcpServers" || target === "vscode" || target === "gemini";
+        if (isEmbeddedSettings) {
+            // Zed/VS Code: merge into existing settings.json
+            let existing = {};
+            if (existsSync(configPath)) {
+                try {
+                    existing = JSON.parse(readFileSync(configPath, "utf-8"));
+                }
+                catch { /* start fresh */ }
+            }
+            existing[mcpKey] = {
+                ...(existing[mcpKey] ?? {}),
+                knowledgine: config.mcpServers?.["knowledgine"] ?? buildMcpConfig(""),
+            };
+            writeFileSync(configPath, JSON.stringify(existing, null, 2) + "\n", "utf-8");
+        }
+        else {
+            writeFileSync(configPath, JSON.stringify(config, null, 2) + "\n", "utf-8");
+        }
+    }
+}
+function isTTY() {
+    // Check both stdin and stdout for interactive prompt support
+    return Boolean(process.stdin.isTTY) && Boolean(process.stdout.isTTY);
 }
-async function promptTarget(io) {
-    const targets = [
-        { value: "claude-desktop", label: "Claude Desktop" },
-        { value: "cursor", label: "Cursor" },
-    ];
-    return new Promise((resolvePrompt, reject) => {
-        const rl = createInterface({
-            input: io.input,
-            output: io.output,
+// Tools that support project-level config (in project root directory)
+export const PROJECT_CONFIG_SUPPORT = {
+    cursor: (root) => join(root, ".cursor", "mcp.json"),
+    "claude-code": (root) => join(root, ".mcp.json"),
+    vscode: (root) => join(root, ".vscode", "mcp.json"),
+    windsurf: (root) => join(root, ".windsurf", "mcp_config.json"),
+    gemini: (root) => join(root, ".gemini", "settings.json"),
+};
+function getConfigPathForScope(target, scope, projectRoot) {
+    if (scope === "project") {
+        const projectFn = PROJECT_CONFIG_SUPPORT[target];
+        if (projectFn)
+            return projectFn(projectRoot);
+    }
+    return getConfigPath(target);
+}
+async function interactiveSetup(rootPath) {
+    p.intro(colors.bold("knowledgine Setup"));
+    // Step 1: Select tools
+    const selectedTargets = await p.multiselect({
+        message: "Which AI tools do you use? (space to select, enter to confirm)",
+        options: TARGETS.map((t) => ({
+            value: t.value,
+            label: t.label,
+            hint: t.description,
+        })),
+        required: true,
+    });
+    if (p.isCancel(selectedTargets)) {
+        p.cancel("Setup cancelled.");
+        return;
+    }
+    const targets = selectedTargets;
+    // Step 2: Select scope (only if any selected tool supports project-level config)
+    const hasProjectSupport = targets.some((t) => t in PROJECT_CONFIG_SUPPORT);
+    let scope = "global";
+    if (hasProjectSupport) {
+        const scopeResult = await p.select({
+            message: "Where should the config be installed?",
+            options: [
+                {
+                    value: "global",
+                    label: "Global",
+                    hint: `User-level config (~/) — works everywhere`,
+                },
+                {
+                    value: "project",
+                    label: "Project",
+                    hint: `Project-level config (./) — scoped to this workspace`,
+                },
+            ],
         });
-        io.output.write("Select target AI tool:\n");
-        for (let i = 0; i < targets.length; i++) {
-            io.output.write(`  ${i + 1}) ${targets[i].label}\n`);
+        if (p.isCancel(scopeResult)) {
+            p.cancel("Setup cancelled.");
+            return;
         }
-        rl.question("Enter number (1-2): ", (answer) => {
-            rl.close();
-            const idx = parseInt(answer, 10) - 1;
-            if (idx >= 0 && idx < targets.length) {
-                resolvePrompt(targets[idx].value);
-            }
-            else {
-                reject(new Error("Invalid selection. Run with --target to specify directly."));
-            }
+        scope = scopeResult;
+    }
+    // Step 3: Configure each tool
+    const s = p.spinner();
+    const results = [];
+    for (const target of targets) {
+        const targetLabel = getTargetLabel(target);
+        const useProject = scope === "project" && target in PROJECT_CONFIG_SUPPORT;
+        const actualScope = useProject ? "project" : "global";
+        s.start(`Configuring ${targetLabel} (${actualScope})...`);
+        try {
+            const configPath = getConfigPathForScope(target, scope, rootPath);
+            const existingConfig = readExistingConfig(configPath, target);
+            const mergedConfig = mergeConfig(existingConfig, rootPath);
+            writeConfig(configPath, mergedConfig, target);
+            s.stop(`${symbols.success} ${colors.success(targetLabel)} configured (${actualScope})`);
+            const note = !useProject && scope === "project" ? "project config not supported, used global" : undefined;
+            results.push({ target, status: "ok", configPath, note });
+        }
+        catch (error) {
+            const msg = error instanceof Error ? error.message : String(error);
+            s.stop(`${symbols.error} ${colors.error(targetLabel)} failed`);
+            results.push({ target, status: "fail", configPath: "", error: msg });
+        }
+    }
+    // Summary
+    const ok = results.filter((r) => r.status === "ok");
+    const fail = results.filter((r) => r.status === "fail");
+    if (ok.length > 0) {
+        const lines = ok.map((r) => {
+            const extra = r.note ? `  ${colors.dim(`(${r.note})`)}` : "";
+            return `${symbols.success} ${getTargetLabel(r.target)}  ${colors.dim(r.configPath)}${extra}`;
         });
-    });
+        p.note(lines.join("\n"), "Configured");
+    }
+    if (fail.length > 0) {
+        const lines = fail.map((r) => `${symbols.error} ${getTargetLabel(r.target)}  ${colors.dim(r.error ?? "")}`);
+        p.note(lines.join("\n"), "Failed");
+    }
+    p.outro(`${colors.success("Setup complete!")} Restart your AI tools to activate knowledgine.`);
 }
-export async function setupCommand(options, io) {
-    const rootPath = resolve(options.path ?? process.cwd());
-    const setupIO = io ?? getDefaultIO();
-    // Check initialization
+export async function setupCommand(options, ioOrCommand) {
+    // Commander.js passes (options, Command) — detect and ignore the Command object
+    const io = ioOrCommand && typeof ioOrCommand.isTTY === "boolean"
+        ? ioOrCommand
+        : undefined;
+    const rootPath = resolveDefaultPath(options.path);
     const knowledgineDir = resolve(rootPath, ".knowledgine");
     if (!existsSync(knowledgineDir)) {
-        console.error(`Error: Not initialized. Run 'knowledgine init --path ${rootPath}' first.`);
+        console.error(`${symbols.error} Not initialized. Run 'knowledgine init --path ${rootPath}' first.`);
         process.exitCode = 1;
         return;
     }
-    // Determine target
-    let target = options.target;
-    if (!target) {
-        if (!setupIO.isTTY) {
+    // Interactive mode when no --target specified
+    if (!options.target) {
+        const tty = io ? io.isTTY : isTTY();
+        if (!tty) {
             console.error("Error: --target is required in non-interactive mode.");
-            console.error("  Supported targets: claude-desktop, cursor");
+            console.error(`  Supported targets: ${TARGETS.map((t) => t.value).join(", ")}`);
             process.exitCode = 1;
             return;
         }
-        target = await promptTarget(setupIO);
+        await interactiveSetup(rootPath);
+        return;
     }
+    const target = options.target;
     const configPath = getConfigPath(target);
     const targetLabel = getTargetLabel(target);
     const shouldWrite = options.write === true;
-    // Read existing config (may throw on invalid JSON)
     let existingConfig;
     try {
-        existingConfig = readExistingConfig(configPath);
+        existingConfig = readExistingConfig(configPath, target);
     }
     catch (error) {
         console.error(error instanceof Error ? error.message : String(error));
         process.exitCode = 1;
         return;
     }
-    const mergedConfig = mergeConfig(existingConfig, rootPath);
-    const configJson = JSON.stringify(mergedConfig, null, 2);
-    console.error(`\nMCP configuration for ${targetLabel}:`);
-    console.error(`  Config: ${configPath}`);
-    console.error("");
-    console.error(configJson);
-    console.error("");
+    const knowledgineConfig = buildMcpConfig(rootPath);
+    const otherServerCount = Object.keys(existingConfig.mcpServers ?? {}).filter((k) => k !== "knowledgine").length;
+    const jsonContent = JSON.stringify({ mcpServers: { knowledgine: knowledgineConfig } }, null, 2);
+    const preserveNote = otherServerCount > 0
+        ? `\n${colors.hint(`(${otherServerCount} other MCP server(s) will be preserved)`)}`
+        : "";
+    const boxContent = `${colors.hint(`Config: ${configPath}`)}${preserveNote}\n\n${jsonContent}`;
+    console.error("\n" + createBox(boxContent, { title: `MCP Configuration for ${targetLabel}`, type: "info" }));
     if (!shouldWrite) {
-        console.error(`To apply: Run with --write flag, then restart ${targetLabel}.`);
-        console.error(`  knowledgine setup --target ${target} --path ${rootPath} --write`);
+        console.error(`${symbols.arrow} ${colors.hint(`To apply: Run with --write flag, then restart ${targetLabel}.`)}`);
+        console.error(`${symbols.arrow} ${colors.hint(`knowledgine setup --target ${target} --path ${rootPath} --write`)}`);
         console.error("");
-        console.error("Run 'knowledgine status' to verify your setup.");
+        console.error(`${symbols.arrow} ${colors.hint("Run 'knowledgine status' to verify your setup.")}`);
         return;
     }
-    // Write config
-    const configDir = resolve(configPath, "..");
-    if (!existsSync(configDir)) {
-        mkdirSync(configDir, { recursive: true });
-    }
-    // Backup existing file
-    if (existsSync(configPath)) {
-        const backupPath = configPath + ".bak";
-        copyFileSync(configPath, backupPath);
-        console.error(`Backup created: ${backupPath}`);
-    }
-    writeFileSync(configPath, configJson + "\n", "utf-8");
-    console.error(`Config written: ${configPath}`);
+    const mergedConfig = mergeConfig(existingConfig, rootPath);
+    writeConfig(configPath, mergedConfig, target);
+    console.error(`${symbols.success} ${colors.success(`Config written: ${configPath}`)}`);
     console.error("");
-    console.error(`Restart ${targetLabel} to activate knowledgine.`);
-    console.error("Run 'knowledgine status' to verify your setup.");
+    console.error(`${symbols.arrow} ${colors.hint(`Restart ${targetLabel} to activate knowledgine.`)}`);
+    console.error(`${symbols.arrow} ${colors.hint("Run 'knowledgine status' to verify your setup.")}`);
 }
 //# sourceMappingURL=setup.js.map