@kitelev/exocortex-cli 16.27.0 → 16.27.1

package/dist/index.js

@@ -1,5 +1,5 @@
 #!/usr/bin/env node
-// @kitelev/exocortex-cli v16.27.0
+// @kitelev/exocortex-cli v16.27.1
 // CLI tool for Exocortex knowledge management system - SPARQL queries, task management, and more
 // License: MIT
 
@@ -762,7 +762,7 @@ ${r}`}o(VX,"serializeFile");function XD(n,e,t={}){let r=Xg.default.dirname(n),i=
 `).map(s=>s.trim()).filter(Boolean)){let s=BX.exec(i);if(s){r.push({sessionName:i,uuid:s[1],type:"full"});continue}let a=UX.exec(i);a&&r.push({sessionName:i,uuid:a[1],type:"short"})}return r}o(WX,"listClaudeChildSessions");function GX(n,e,t){let r=null,i=e.toLowerCase();function s(a){if(r)return;let c;try{c=(0,Zg.readdirSync)(a,{withFileTypes:!0})}catch{return}for(let l of c){if(r)return;if(l.name.startsWith(".")||l.name==="node_modules")continue;let u=(0,JD.join)(a,l.name);if(l.isDirectory())s(u);else if(l.name.endsWith(".md")){let f=l.name.slice(0,-3).toLowerCase();(t==="full"&&f===i||t==="short"&&f.startsWith(i))&&(r=u)}}}return o(s,"walk"),s(n),r}o(GX,"findVaultFile");function zX(n,e){try{let i=(e??(s=>(0,Zg.readFileSync)(s,"utf8")))(n).match(/ems__Effort_status\s*:.*\[\[([^\]]+)\]\]/);return i?i[1].includes(qX):!1}catch{return!1}}o(zX,"isTaskDoing");async function eL(n,e=Jg.exec,t){let r=await WX(e),i=[];for(let s of r){let a=GX(n,s.uuid,s.type);if(!a){i.push({sessionName:s.sessionName,taskUuid:s.uuid,taskFilePath:null,reason:"vault task not found"});continue}zX(a,t)||i.push({sessionName:s.sessionName,taskUuid:s.uuid,taskFilePath:a,reason:"vault task status != Doing"})}return i}o(eL,"detectOrphans");async function tL(n,e,t=Jg.exec,r=XD){let i=ZD(t);if(e)return{ok:!0};let s=new Date().toISOString();if(n.taskFilePath)try{r(n.taskFilePath,{ems__Effort_status:"[[ems__EffortStatusFailed]]",aiTask__Task_lastError:`orphan recovery: ${n.reason}`,exo__Asset_updatedAt:s})}catch(a){return{ok:!1,error:`vault update failed: ${a.message}`}}try{await i(`tmux kill-session -t ${JSON.stringify(n.sessionName)}`)}catch{}return{ok:!0}}o(tL,"recoverOrphan");function HX(){return process.env.EXOCORTEX_VAULT??(0,ey.join)((0,nL.homedir)(),"vault-2025")}o(HX,"defaultVault");function iL(){return new Ce("recover").description("Detect and recover orphaned claude-child tmux sessions. A session is orphaned when the corresponding vault task is not in Doing status. Default mode: dry-run (no changes). Use --apply to perform recovery.").option("--vault <path>","Path to Obsidian vault",HX()).option("--dry-run","List orphans without applying changes (default)",!1).option("--apply","Apply orphan recovery: set Failed + kill tmux session",!1).action(async n=>{let e=(0,ey.resolve)(n.vault);if(!(0,rL.existsSync)(e)){console.error(`[recover] vault not found: ${e}`),process.exitCode=1;return}let t=!n.apply;console.log(`[recover] vault=${e} mode=${t?"dry-run":"apply"}`);let r=await eL(e);if(r.length===0){console.log("[recover] No orphaned claude-child sessions found.");return}console.log(`[recover] Found ${r.length} orphan(s):`);for(let a of r){let c=a.taskFilePath??"(not found in vault)";console.log(`  session=${a.sessionName}  uuid=${a.taskUuid}  reason=${a.reason}`),console.log(`    file=${c}`)}if(t){console.log("[recover] Dry-run mode: no changes applied. Use --apply to recover.");return}let i=0,s=0;for(let a of r){let c=await tL(a,!1);c.ok?(i++,console.log(`[recover] RECOVERED: ${a.sessionName}`)):(s++,console.error(`[recover] ERROR recovering ${a.sessionName}: ${c.error}`))}console.log(`[recover] Done: recovered=${i} errors=${s}`),s>0&&(process.exitCode=1)})}o(iL,"recoverCommand");var F2=require("fs"),ty=require("path"),zn=ae(rr());function QX(n,e){return e.concat([n])}o(QX,"collectAlso");var KX="https://exocortex.my/ontology/find#Alias_sparql",YX="https://exocortex.my/ontology/exo#Asset_label";function eu(n){if(n&&typeof n=="object"&&"value"in n){let e=n.value;return typeof e=="string"?e:String(e)}return String(n)}o(eu,"nodeValue");async function XX(n,e){let t=await n.match(void 0,void 0,void 0),r=[];for(let s of t)eu(s.predicate)!==YX||eu(s.object)!==e||r.push(eu(s.subject));if(r.length===0)return null;let i=[];for(let s of r)for(let a of t)eu(a.predicate)===KX&&eu(a.subject)===s&&i.push(eu(a.object));if(i.length===0)return null;if(i.length>1)throw new Bt(`Ambiguous find__Alias "${e}" \u2014 ${i.length} instances define a sparql fragment`,`Ensure exactly one find__Alias asset has exo:Asset_label "${e}"`);return i[0]}o(XX,"resolveAliasFragment");var JX=/^([a-z][a-zA-Z0-9]*)__([A-Za-z0-9_]+)$/,ZX="https://exocortex.my/ontology/";function eJ(n,e){let t=JX.exec(e);if(t){let i=`<${ZX}${t[1]}#${t[2]}>`;return n.replace(/\?value\b/g,i)}let r=e.replace(/\\/g,"\\\\").replace(/"/g,'\\"');return n.replace(/\?value\b/g,`"${r}"`)}o(eJ,"bindValueLiteral");function sL(){return new Ce("find").description("Find vault assets via SPARQL \u2014 outputs file paths one per line (RFC 8e83442b T1.1)").option("--vault <path>","Path to Obsidian vault",process.cwd()).option("--also <path>","Additional vault to include (repeatable)",QX,[]).option("--sparql <query>","SPARQL SELECT query (must bind ?path)").option("--class <value>","Filter by class label via find__Alias 'class' (e.g. ems__Task)").action(async n=>{pe.setFormat("text");try{if(n.sparql&&n.class)throw new Bt("--sparql and --class are mutually exclusive","Pass either a raw --sparql query or a find__Alias-backed flag like --class");if(!n.sparql&&!n.class)throw new Bt("one of --sparql <query> or --class <value> is required",'exocortex find --class ems__Task   OR   exocortex find --sparql "SELECT ?path WHERE { ... }"');let e=(0,ty.resolve)(n.vault);if(!(0,F2.existsSync)(e))throw new De(e);let t=new kt(e),i=await new zn.NoteToRDFConverter(t).convertVault(),s=n.also||[];for(let w of s){let T=(0,ty.resolve)(w);if(!(0,F2.existsSync)(T))throw new De(T);let C=new kt(T),N=await new zn.NoteToRDFConverter(C).convertVault();i=i.concat(N)}let a=new zn.InMemoryTripleStore;await a.addAll(i);let c;if(n.class){let w=await XX(a,"class");if(w===null)throw new Bt('No find__Alias with exo:Asset_label "class" was found in the vault',"Seed a find__Alias asset (label=class) or fall back to exocortex find --sparql");c=`SELECT ?path WHERE { ${eJ(w,n.class)} }`}else c=n.sparql;let l=zl(c);l=Za(l);let u=new zn.ExoQLParser,f=eo(Ja(e));for(let w of s){let T=eo(Ja((0,ty.resolve)(w)));for(let[C,V]of T)f.has(C)||f.set(C,V)}f.size>0&&u.setVaultPrefixes(f);let d=u.parse(l),p=new zn.ExoQLAlgebraTranslator().translate(d);p.type!=="construct"&&(p=new zn.AlgebraOptimizer().optimize(p));let S=await new zn.ExoQLQueryExecutor(a).executeAll(p),v="obsidian://vault/";for(let w of S){let C=w.toJSON().path;if(typeof C!="string"||!C.startsWith(v))continue;let V=C.slice(v.length),N;try{N=decodeURIComponent(V)}catch{N=V}process.stdout.write(N+`
 `)}}catch(e){pe.handle(e),process.exit(5)}})}o(sL,"findCommand");var N2=require("fs"),k2=require("path"),Re=ae(rr());var fL=ae(rr()),Ft=ae(cL());var lL="obsidian://vault/";function hJ(n){let e=/^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$/i;return{async resolveTargetPath(t){if(!t)throw new Error("Cannot resolve empty targetIRI to a vault path");let r=t;if(r.startsWith(lL))r=decodeURI(r.slice(lL.length));else if(e.test(r)){let i=await n.findFileByUID(r);if(!i)throw new Error(`No vault file found for UID: ${r}`);r=i}if(r.endsWith(".md")||(r=`${r}.md`),!await n.fileExists(r))throw new Error(`Cannot resolve target file for IRI "${t}" (tried "${r}")`);return r}}}o(hJ,"createCliPathResolver");var pJ=["openFile","sparqlSelect","getActiveFileIRI","getActiveFilePath","trashFile","duplicateFile"],L2=class extends Error{constructor(t){super(`Service "${t}" is not implemented in the CLI (no-op stub). dyncommand exec on this service_call grounding cannot change vault state. See CLI parity issues #2865-#2868 for port status.`);this.serviceId=t;this.name="CliServiceNotImplementedError"}static{o(this,"CliServiceNotImplementedError")}};function uL(n){return{async execute(){throw new L2(n)}}}o(uL,"notImplementedService");function mJ(n){return e=>{let t=n.getFirstLinkpathDest(e,"");if(!t||!("basename"in t))return null;let i=n.getFrontmatter(t)?.exo__Asset_label;return typeof i=="string"&&i.length>0?i:null}}o(mJ,"createCliClassResolver");function dL(n,e){for(let t of pJ)n.register(t,uL(t));for(let t of["updateProperty","removeProperty","setStatus","createAsset"])n.register(t,uL(t));if(e){if(e.fsAdapter){let t=new fL.FrontmatterService,r=hJ(e.fsAdapter);n.register("updateProperty",(0,Ft.createUpdatePropertyService)(e.fsAdapter,t,r)),n.register("removeProperty",(0,Ft.createRemovePropertyService)(e.fsAdapter,t,r)),n.register("setStatus",(0,Ft.createSetStatusService)(e.fsAdapter,t,r)),n.register("createAsset",(0,Ft.createCreateAssetService)(e.vaultAdapter,e.fsAdapter,mJ(e.vaultAdapter)))}n.register("createRelatedTask",(0,Ft.createCreateRelatedTaskService)(e.vaultAdapter,e.genericAssetCreationService)),n.register("createRelatedProject",(0,Ft.createCreateRelatedProjectService)(e.vaultAdapter,e.genericAssetCreationService)),n.register("archiveAsset",(0,Ft.createArchiveAssetService)(e.vaultAdapter,e.archiveAssetService)),n.register("planForEvening",(0,Ft.createPlanForEveningService)(e.vaultAdapter,e.taskStatusService)),n.register("cleanProperties",(0,Ft.createCleanPropertiesService)(e.vaultAdapter,e.propertyCleanupService)),n.register("renameToUid",(0,Ft.createRenameToUidService)(e.vaultAdapter,e.renameToUidService)),n.register("repairFolder",(0,Ft.createRepairFolderService)(e.vaultAdapter,e.folderRepairService)),n.register("fixMissingLabel",(0,Ft.createFixMissingLabelService)(e.vaultAdapter,e.fixMissingLabelService))}}o(dL,"populateCliServiceRegistry");var gJ=/^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$/i;async function yJ(){if(process.stdin.isTTY)return[];let n=[];for await(let t of process.stdin)n.push(t);return Buffer.concat(n).toString("utf-8").split(`
 `).map(t=>t.trim()).filter(t=>t.length>0)}o(yJ,"readStdinLines");function ny(n){if(n&&typeof n=="object"&&"value"in n){let e=n.value;return typeof e=="string"?e:String(e)}return String(n)}o(ny,"nodeValue");async function _J(n,e){let t=new Re.IRI("https://exocortex.my/ontology/exocmd#Command_cliName"),r=await n.match(void 0,t,void 0),i=[];for(let s of r)if(ny(s.object)===e){let l=ny(s.subject).match(/([0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12})\.md$/i);l&&i.push(l[1])}if(i.length===0)return null;if(i.length>1)throw new Bt(`Ambiguous cliName "${e}" \u2014 resolves to ${i.length} commands: ${i.join(", ")}`,"Use the UUID directly: exocortex apply <uuid> <path>");return i[0]}o(_J,"resolveSlugToUuid");async function bJ(n,e){let t=new Re.IRI("https://exocortex.my/ontology/exocmd#Command_destructive"),r=await n.match(void 0,t,void 0);for(let i of r)if(ny(i.subject).includes(e)){let a=ny(i.object);if(a==="true"||a==="True")return!0}return!1}o(bJ,"isDestructive");async function SJ(n,e,t,r,i,s,a){let c=(0,k2.resolve)(n,r);if(!(0,N2.existsSync)(c))return console.error(`\u274C Target file not found: ${r}`),!1;let u=await new Re.CommandResolver(e).loadCommand(t);if(!u)return console.error(`\u274C Command with UID "${t}" not found.`),!1;if(await bJ(e,t)&&!i.dryRun&&!i.yes)return console.error(`\u274C Command "${u.name}" is marked destructive. Add --dry-run to preview, or --yes to apply.`),!1;let d=(0,Re.vaultPathToIRI)(r);if(!await new Re.PreconditionEvaluator(e,void 0,{clock:s}).evaluate(u.precondition,d))return console.error(`\u274C Precondition not satisfied for "${u.name}" on "${r}".`),!1;if(i.dryRun)return console.log(`\u{1F50D} Dry-run: would apply "${u.name}" to "${r}" (precondition passed).`),!0;let y=new Re.ServiceRegistry,S=new kt(n),v=new Re.GenericAssetCreationService(S).withDeterminism({clock:s,uidGenerator:a}),w=new Re.ArchiveAssetService(S),T=new Re.PropertyCleanupService(S),C=new Re.FixMissingLabelService(S),V=new Re.RenameToUidService(S),N=new Re.FolderRepairService(S),ee=new Re.TaskStatusService(S,new Re.EffortStatusWorkflow,new Re.StatusTimestampService(S)),B=new pr(n);dL(y,{vaultAdapter:S,fsAdapter:B,genericAssetCreationService:v,archiveAssetService:w,taskStatusService:ee,propertyCleanupService:T,fixMissingLabelService:C,renameToUidService:V,folderRepairService:N});let W=new Re.GroundingExecutor(B,B,y,(0,Re.createVaultFrontmatterClassLabelResolver)(B),{clock:s,uidGenerator:a}),F;if(i.input)try{let G=JSON.parse(i.input);if(typeof G!="object"||G===null||Array.isArray(G))throw new Error("must be a JSON object");F=G}catch(G){let Oe=G instanceof Error?G.message:String(G);return console.error(`\u274C --input: invalid JSON object (${Oe})`),!1}let D=await W.execute(u.grounding,d,r,F);if(D.success){let G=u.successMessage??`Applied "${u.name}" to "${r}".`;return console.log(`\u2705 ${G}`),!0}else return console.error(`\u274C "${u.name}" failed on "${r}": ${D.error}`),!1}o(SJ,"executeOnTarget");function hL(){return new Ce("apply").description("Apply an exocmd__Command to one or more vault assets (RFC 8e83442b T1.2). Pass a path arg or pipe paths via stdin.").argument("<cmd>","Command UUID or cliName slug").argument("[path]","Vault-relative path to target asset (omit to read paths from stdin)").option("--vault <path>","Path to Obsidian vault",process.cwd()).option("--dry-run","Preview without writing").option("--yes","Skip destructive-command confirmation").option("--input <json>","JSON userInput for service_call groundings").option("--seed <uuid>","Deterministic UID seed for test/replay (uses seededUidGenerator)").option("--frozen-clock <iso>","Freeze clock to ISO timestamp for test/replay (uses frozenClock)").action(async(n,e,t)=>{pe.setFormat("text");try{let r=(0,k2.resolve)(t.vault);if(!(0,N2.existsSync)(r))throw new De(r);Bg(r);let i=t.frozenClock?(0,Re.frozenClock)(t.frozenClock):(0,Re.liveClock)(),s=t.seed?(0,Re.seededUidGenerator)(t.seed):(0,Re.liveUidGenerator)(),a=new kt(r),l=await new Re.NoteToRDFConverter(a).convertVault(),u=new Re.InMemoryTripleStore;await u.addAll(l);let f;if(gJ.test(n))f=n;else{let y=await _J(u,n);y||(console.error(`\u274C No command found with UUID or cliName "${n}".`),process.exit(3)),f=y}let d;if(e)d=[e];else if(d=await yJ(),d.length===0)throw new Bt("No target path provided and stdin is empty.","exocortex apply <uuid> <path>  OR  exocortex find ... | exocortex apply <uuid>");let h=0,p=0;for(let y of d)await SJ(r,u,f,y,t,i,s)?h++:p++;d.length>1&&console.log(`
-\u{1F4CA} Applied to ${h}/${d.length} target(s) (${p} failed).`),p>0&&process.exit(5)}catch(r){pe.handle(r),process.exit(5)}})}o(hL,"applyCommand");function pL(n){let e=new Ce;return e.name("exocortex").description("CLI tool for Exocortex knowledge management system").version(n??"16.27.0"),e.addCommand(sL()),e.addCommand(hL()),e.addCommand(DF()),e.addCommand(jF()),e.addCommand(lD()),e.addCommand(VF()),e.addCommand(BF()),e.addCommand(zF()),e.addCommand(dD()),e.addCommand(ED()),e.addCommand(ID()),e.addCommand(xD()),e.addCommand(RD()),e.addCommand(VD()),e.addCommand(BD()),e.addCommand(QD()),e.addCommand(iL()),e}o(pL,"createProgram");pL().parse();0&&(module.exports={createProgram});
+\u{1F4CA} Applied to ${h}/${d.length} target(s) (${p} failed).`),p>0&&process.exit(5)}catch(r){pe.handle(r),process.exit(5)}})}o(hL,"applyCommand");function pL(n){let e=new Ce;return e.name("exocortex").description("CLI tool for Exocortex knowledge management system").version(n??"16.27.1"),e.addCommand(sL()),e.addCommand(hL()),e.addCommand(DF()),e.addCommand(jF()),e.addCommand(lD()),e.addCommand(VF()),e.addCommand(BF()),e.addCommand(zF()),e.addCommand(dD()),e.addCommand(ED()),e.addCommand(ID()),e.addCommand(xD()),e.addCommand(RD()),e.addCommand(VD()),e.addCommand(BD()),e.addCommand(QD()),e.addCommand(iL()),e}o(pL,"createProgram");pL().parse();0&&(module.exports={createProgram});
 /*! Bundled license information:
 
 reflect-metadata/Reflect.js:

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@kitelev/exocortex-cli",
-  "version": "16.27.0",
+  "version": "16.27.1",
   "description": "CLI tool for Exocortex knowledge management system - SPARQL queries, task management, and more",
   "main": "dist/index.js",
   "bin": {