@kitelev/exocortex-cli 16.13.0 → 16.13.1

package/dist/index.js

@@ -1,5 +1,5 @@
 #!/usr/bin/env node
-// @kitelev/exocortex-cli v16.13.0
+// @kitelev/exocortex-cli v16.13.1
 // CLI tool for Exocortex knowledge management system - SPARQL queries, task management, and more
 // License: MIT
 
@@ -760,7 +760,7 @@ ${r}`}o(RY,"serializeFile");function hD(n,e,t={}){let r=jg.default.dirname(n),i=
 `).map(s=>s.trim()).filter(Boolean)){let s=OY.exec(i);if(s){r.push({sessionName:i,uuid:s[1],type:"full"});continue}let a=PY.exec(i);a&&r.push({sessionName:i,uuid:a[1],type:"short"})}return r}o(DY,"listClaudeChildSessions");function NY(n,e,t){let r=null,i=e.toLowerCase();function s(a){if(r)return;let c;try{c=(0,$g.readdirSync)(a,{withFileTypes:!0})}catch{return}for(let l of c){if(r)return;if(l.name.startsWith(".")||l.name==="node_modules")continue;let u=(0,pD.join)(a,l.name);if(l.isDirectory())s(u);else if(l.name.endsWith(".md")){let f=l.name.slice(0,-3).toLowerCase();(t==="full"&&f===i||t==="short"&&f.startsWith(i))&&(r=u)}}}return o(s,"walk"),s(n),r}o(NY,"findVaultFile");function LY(n,e){try{let i=(e??(s=>(0,$g.readFileSync)(s,"utf8")))(n).match(/ems__Effort_status\s*:.*\[\[([^\]]+)\]\]/);return i?i[1].includes(FY):!1}catch{return!1}}o(LY,"isTaskDoing");async function gD(n,e=Mg.exec,t){let r=await DY(e),i=[];for(let s of r){let a=NY(n,s.uuid,s.type);if(!a){i.push({sessionName:s.sessionName,taskUuid:s.uuid,taskFilePath:null,reason:"vault task not found"});continue}LY(a,t)||i.push({sessionName:s.sessionName,taskUuid:s.uuid,taskFilePath:a,reason:"vault task status != Doing"})}return i}o(gD,"detectOrphans");async function yD(n,e,t=Mg.exec,r=hD){let i=mD(t);if(e)return{ok:!0};let s=new Date().toISOString();if(n.taskFilePath)try{r(n.taskFilePath,{ems__Effort_status:"[[ems__EffortStatusFailed]]",aiTask__Task_lastError:`orphan recovery: ${n.reason}`,exo__Asset_updatedAt:s})}catch(a){return{ok:!1,error:`vault update failed: ${a.message}`}}try{await i(`tmux kill-session -t ${JSON.stringify(n.sessionName)}`)}catch{}return{ok:!0}}o(yD,"recoverOrphan");function kY(){return process.env.EXOCORTEX_VAULT??(0,Vg.join)((0,bD.homedir)(),"vault-2025")}o(kY,"defaultVault");function SD(){return new Ie("recover").description("Detect and recover orphaned claude-child tmux sessions. A session is orphaned when the corresponding vault task is not in Doing status. Default mode: dry-run (no changes). Use --apply to perform recovery.").option("--vault <path>","Path to Obsidian vault",kY()).option("--dry-run","List orphans without applying changes (default)",!1).option("--apply","Apply orphan recovery: set Failed + kill tmux session",!1).action(async n=>{let e=(0,Vg.resolve)(n.vault);if(!(0,_D.existsSync)(e)){console.error(`[recover] vault not found: ${e}`),process.exitCode=1;return}let t=!n.apply;console.log(`[recover] vault=${e} mode=${t?"dry-run":"apply"}`);let r=await gD(e);if(r.length===0){console.log("[recover] No orphaned claude-child sessions found.");return}console.log(`[recover] Found ${r.length} orphan(s):`);for(let a of r){let c=a.taskFilePath??"(not found in vault)";console.log(`  session=${a.sessionName}  uuid=${a.taskUuid}  reason=${a.reason}`),console.log(`    file=${c}`)}if(t){console.log("[recover] Dry-run mode: no changes applied. Use --apply to recover.");return}let i=0,s=0;for(let a of r){let c=await yD(a,!1);c.ok?(i++,console.log(`[recover] RECOVERED: ${a.sessionName}`)):(s++,console.error(`[recover] ERROR recovering ${a.sessionName}: ${c.error}`))}console.log(`[recover] Done: recovered=${i} errors=${s}`),s>0&&(process.exitCode=1)})}o(SD,"recoverCommand");var f2=require("fs"),Bg=require("path"),Wn=le(br());function jY(n,e){return e.concat([n])}o(jY,"collectAlso");var MY="https://exocortex.my/ontology/find#Alias_sparql",$Y="https://exocortex.my/ontology/exo#Asset_label";function Ql(n){if(n&&typeof n=="object"&&"value"in n){let e=n.value;return typeof e=="string"?e:String(e)}return String(n)}o(Ql,"nodeValue");async function VY(n,e){let t=await n.match(void 0,void 0,void 0),r=[];for(let s of t)Ql(s.predicate)!==$Y||Ql(s.object)!==e||r.push(Ql(s.subject));if(r.length===0)return null;let i=[];for(let s of r)for(let a of t)Ql(a.predicate)===MY&&Ql(a.subject)===s&&i.push(Ql(a.object));if(i.length===0)return null;if(i.length>1)throw new Vt(`Ambiguous find__Alias "${e}" \u2014 ${i.length} instances define a sparql fragment`,`Ensure exactly one find__Alias asset has exo:Asset_label "${e}"`);return i[0]}o(VY,"resolveAliasFragment");var BY=/^([a-z][a-zA-Z0-9]*)__([A-Za-z0-9_]+)$/,UY="https://exocortex.my/ontology/";function qY(n,e){let t=BY.exec(e);if(t){let i=`<${UY}${t[1]}#${t[2]}>`;return n.replace(/\?value\b/g,i)}let r=e.replace(/\\/g,"\\\\").replace(/"/g,'\\"');return n.replace(/\?value\b/g,`"${r}"`)}o(qY,"bindValueLiteral");function wD(){return new Ie("find").description("Find vault assets via SPARQL \u2014 outputs file paths one per line (RFC 8e83442b T1.1)").option("--vault <path>","Path to Obsidian vault",process.cwd()).option("--also <path>","Additional vault to include (repeatable)",jY,[]).option("--sparql <query>","SPARQL SELECT query (must bind ?path)").option("--class <value>","Filter by class label via find__Alias 'class' (e.g. ems__Task)").action(async n=>{pe.setFormat("text");try{if(n.sparql&&n.class)throw new Vt("--sparql and --class are mutually exclusive","Pass either a raw --sparql query or a find__Alias-backed flag like --class");if(!n.sparql&&!n.class)throw new Vt("one of --sparql <query> or --class <value> is required",'exocortex find --class ems__Task   OR   exocortex find --sparql "SELECT ?path WHERE { ... }"');let e=(0,Bg.resolve)(n.vault);if(!(0,f2.existsSync)(e))throw new Fe(e);let t=new Lt(e),i=await new Wn.NoteToRDFConverter(t).convertVault(),s=n.also||[];for(let w of s){let T=(0,Bg.resolve)(w);if(!(0,f2.existsSync)(T))throw new Fe(T);let C=new Lt(T),$=await new Wn.NoteToRDFConverter(C).convertVault();i=i.concat($)}let a=new Wn.InMemoryTripleStore;await a.addAll(i);let c;if(n.class){let w=await VY(a,"class");if(w===null)throw new Vt('No find__Alias with exo:Asset_label "class" was found in the vault',"Seed a find__Alias asset (label=class) or fall back to exocortex find --sparql");c=`SELECT ?path WHERE { ${qY(w,n.class)} }`}else c=n.sparql;let l=Bl(c);l=Ya(l);let u=new Wn.ExoQLParser,f=Xa(Ka(e));for(let w of s){let T=Xa(Ka((0,Bg.resolve)(w)));for(let[C,M]of T)f.has(C)||f.set(C,M)}f.size>0&&u.setVaultPrefixes(f);let d=u.parse(l),p=new Wn.ExoQLAlgebraTranslator().translate(d);p.type!=="construct"&&(p=new Wn.AlgebraOptimizer().optimize(p));let S=await new Wn.ExoQLQueryExecutor(a).executeAll(p),v="obsidian://vault/";for(let w of S){let C=w.toJSON().path;if(typeof C!="string"||!C.startsWith(v))continue;let M=C.slice(v.length),$;try{$=decodeURIComponent(M)}catch{$=M}process.stdout.write($+`
 `)}}catch(e){pe.handle(e),process.exit(5)}})}o(wD,"findCommand");var h2=require("fs"),p2=require("path"),tt=le(br());var xD=le(br()),Ut=le(ED());var TD="obsidian://vault/";function tX(n){let e=/^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$/i;return{async resolveTargetPath(t){if(!t)throw new Error("Cannot resolve empty targetIRI to a vault path");let r=t;if(r.startsWith(TD))r=decodeURI(r.slice(TD.length));else if(e.test(r)){let i=await n.findFileByUID(r);if(!i)throw new Error(`No vault file found for UID: ${r}`);r=i}if(r.endsWith(".md")||(r=`${r}.md`),!await n.fileExists(r))throw new Error(`Cannot resolve target file for IRI "${t}" (tried "${r}")`);return r}}}o(tX,"createCliPathResolver");var rX=["createAsset","openFile","sparqlSelect","getActiveFileIRI","getActiveFilePath","trashFile","duplicateFile"],d2=class extends Error{constructor(t){super(`Service "${t}" is not implemented in the CLI (no-op stub). dyncommand exec on this service_call grounding cannot change vault state. See CLI parity issues #2865-#2868 for port status.`);this.serviceId=t;this.name="CliServiceNotImplementedError"}static{o(this,"CliServiceNotImplementedError")}};function AD(n){return{async execute(){throw new d2(n)}}}o(AD,"notImplementedService");function ID(n,e){for(let t of rX)n.register(t,AD(t));for(let t of["updateProperty","removeProperty","setStatus"])n.register(t,AD(t));if(e){if(e.fsAdapter){let t=new xD.FrontmatterService,r=tX(e.fsAdapter);n.register("updateProperty",(0,Ut.createUpdatePropertyService)(e.fsAdapter,t,r)),n.register("removeProperty",(0,Ut.createRemovePropertyService)(e.fsAdapter,t,r)),n.register("setStatus",(0,Ut.createSetStatusService)(e.fsAdapter,t,r))}n.register("createRelatedTask",(0,Ut.createCreateRelatedTaskService)(e.vaultAdapter,e.genericAssetCreationService)),n.register("createRelatedProject",(0,Ut.createCreateRelatedProjectService)(e.vaultAdapter,e.genericAssetCreationService)),n.register("archiveAsset",(0,Ut.createArchiveAssetService)(e.vaultAdapter,e.archiveAssetService)),n.register("planForEvening",(0,Ut.createPlanForEveningService)(e.vaultAdapter,e.taskStatusService)),n.register("cleanProperties",(0,Ut.createCleanPropertiesService)(e.vaultAdapter,e.propertyCleanupService)),n.register("renameToUid",(0,Ut.createRenameToUidService)(e.vaultAdapter,e.renameToUidService)),n.register("repairFolder",(0,Ut.createRepairFolderService)(e.vaultAdapter,e.folderRepairService)),n.register("fixMissingLabel",(0,Ut.createFixMissingLabelService)(e.vaultAdapter,e.fixMissingLabelService))}}o(ID,"populateCliServiceRegistry");var nX=/^[0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12}$/i;async function iX(){if(process.stdin.isTTY)return[];let n=[];for await(let t of process.stdin)n.push(t);return Buffer.concat(n).toString("utf-8").split(`
 `).map(t=>t.trim()).filter(t=>t.length>0)}o(iX,"readStdinLines");function Ug(n){if(n&&typeof n=="object"&&"value"in n){let e=n.value;return typeof e=="string"?e:String(e)}return String(n)}o(Ug,"nodeValue");async function sX(n,e){let t=new tt.IRI("https://exocortex.my/ontology/exocmd#Command_cliName"),r=await n.match(void 0,t,void 0),i=[];for(let s of r)if(Ug(s.object)===e){let l=Ug(s.subject).match(/([0-9a-f]{8}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{4}-[0-9a-f]{12})\.md$/i);l&&i.push(l[1])}if(i.length===0)return null;if(i.length>1)throw new Vt(`Ambiguous cliName "${e}" \u2014 resolves to ${i.length} commands: ${i.join(", ")}`,"Use the UUID directly: exocortex apply <uuid> <path>");return i[0]}o(sX,"resolveSlugToUuid");async function aX(n,e){let t=new tt.IRI("https://exocortex.my/ontology/exocmd#Command_destructive"),r=await n.match(void 0,t,void 0);for(let i of r)if(Ug(i.subject).includes(e)){let a=Ug(i.object);if(a==="true"||a==="True")return!0}return!1}o(aX,"isDestructive");async function oX(n,e,t,r,i){let s=(0,p2.resolve)(n,r);if(!(0,h2.existsSync)(s))return console.error(`\u274C Target file not found: ${r}`),!1;let c=await new tt.CommandResolver(e).loadCommand(t);if(!c)return console.error(`\u274C Command with UID "${t}" not found.`),!1;if(await aX(e,t)&&!i.dryRun&&!i.yes)return console.error(`\u274C Command "${c.name}" is marked destructive. Add --dry-run to preview, or --yes to apply.`),!1;let u=(0,tt.vaultPathToIRI)(r);if(!await new tt.PreconditionEvaluator(e).evaluate(c.precondition,u))return console.error(`\u274C Precondition not satisfied for "${c.name}" on "${r}".`),!1;if(i.dryRun)return console.log(`\u{1F50D} Dry-run: would apply "${c.name}" to "${r}" (precondition passed).`),!0;let h=new tt.ServiceRegistry,p=new Lt(n),y=new tt.GenericAssetCreationService(p),S=new tt.ArchiveAssetService(p),v=new tt.PropertyCleanupService(p),w=new tt.FixMissingLabelService(p),T=new tt.RenameToUidService(p),C=new tt.FolderRepairService(p),M=new tt.TaskStatusService(p,new tt.EffortStatusWorkflow,new tt.StatusTimestampService(p)),$=new hr(n);ID(h,{vaultAdapter:p,fsAdapter:$,genericAssetCreationService:y,archiveAssetService:S,taskStatusService:M,propertyCleanupService:v,fixMissingLabelService:w,renameToUidService:T,folderRepairService:C});let ee=new tt.GroundingExecutor($,$,h),B;if(i.input)try{let P=JSON.parse(i.input);if(typeof P!="object"||P===null||Array.isArray(P))throw new Error("must be a JSON object");B=P}catch(P){let D=P instanceof Error?P.message:String(P);return console.error(`\u274C --input: invalid JSON object (${D})`),!1}let z=await ee.execute(c.grounding,u,r,B);if(z.success){let P=c.successMessage??`Applied "${c.name}" to "${r}".`;return console.log(`\u2705 ${P}`),!0}else return console.error(`\u274C "${c.name}" failed on "${r}": ${z.error}`),!1}o(oX,"executeOnTarget");function CD(){return new Ie("apply").description("Apply an exocmd__Command to one or more vault assets (RFC 8e83442b T1.2). Pass a path arg or pipe paths via stdin.").argument("<cmd>","Command UUID or cliName slug").argument("[path]","Vault-relative path to target asset (omit to read paths from stdin)").option("--vault <path>","Path to Obsidian vault",process.cwd()).option("--dry-run","Preview without writing").option("--yes","Skip destructive-command confirmation").option("--input <json>","JSON userInput for service_call groundings").action(async(n,e,t)=>{pe.setFormat("text");try{let r=(0,p2.resolve)(t.vault);if(!(0,h2.existsSync)(r))throw new Fe(r);let i=new Lt(r),a=await new tt.NoteToRDFConverter(i).convertVault(),c=new tt.InMemoryTripleStore;await c.addAll(a);let l;if(nX.test(n))l=n;else{let h=await sX(c,n);h||(console.error(`\u274C No command found with UUID or cliName "${n}".`),process.exit(3)),l=h}let u;if(e)u=[e];else if(u=await iX(),u.length===0)throw new Vt("No target path provided and stdin is empty.","exocortex apply <uuid> <path>  OR  exocortex find ... | exocortex apply <uuid>");let f=0,d=0;for(let h of u)await oX(r,c,l,h,t)?f++:d++;u.length>1&&console.log(`
-\u{1F4CA} Applied to ${f}/${u.length} target(s) (${d} failed).`),d>0&&process.exit(5)}catch(r){pe.handle(r),process.exit(5)}})}o(CD,"applyCommand");function RD(n){let e=new Ie;return e.name("exocortex").description("CLI tool for Exocortex knowledge management system").version(n??"16.13.0"),e.addCommand(wD()),e.addCommand(CD()),e.addCommand(ZP()),e.addCommand(nF()),e.addCommand(CF()),e.addCommand(aF()),e.addCommand(oF()),e.addCommand(dF()),e.addCommand(PF()),e.addCommand($F()),e.addCommand(UF()),e.addCommand(qF()),e.addCommand(GF()),e.addCommand(rD()),e.addCommand(nD()),e.addCommand(uD()),e.addCommand(SD()),e}o(RD,"createProgram");RD().parse();0&&(module.exports={createProgram});
+\u{1F4CA} Applied to ${f}/${u.length} target(s) (${d} failed).`),d>0&&process.exit(5)}catch(r){pe.handle(r),process.exit(5)}})}o(CD,"applyCommand");function RD(n){let e=new Ie;return e.name("exocortex").description("CLI tool for Exocortex knowledge management system").version(n??"16.13.1"),e.addCommand(wD()),e.addCommand(CD()),e.addCommand(ZP()),e.addCommand(nF()),e.addCommand(CF()),e.addCommand(aF()),e.addCommand(oF()),e.addCommand(dF()),e.addCommand(PF()),e.addCommand($F()),e.addCommand(UF()),e.addCommand(qF()),e.addCommand(GF()),e.addCommand(rD()),e.addCommand(nD()),e.addCommand(uD()),e.addCommand(SD()),e}o(RD,"createProgram");RD().parse();0&&(module.exports={createProgram});
 /*! Bundled license information:
 
 reflect-metadata/Reflect.js:

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@kitelev/exocortex-cli",
-  "version": "16.13.0",
+  "version": "16.13.1",
   "description": "CLI tool for Exocortex knowledge management system - SPARQL queries, task management, and more",
   "main": "dist/index.js",
   "bin": {