@kent-tokyo/chematic 0.7.0 → 0.8.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/chematic_wasm.d.ts +27 -0
- package/chematic_wasm.js +50 -0
- package/chematic_wasm_bg.wasm +0 -0
- package/package.json +1 -1
package/chematic_wasm.d.ts
CHANGED
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@@ -1612,6 +1612,32 @@ export function rdkit_ecfp_config_detail_json(mol: MolHandle, radius: number, nb
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1612
1612
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*/
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1613
1613
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export function remove_hydrogens(mol: MolHandle): MolHandle;
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1614
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1615
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+
/**
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1616
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* Single-step retrosynthetic disconnection (issue #91).
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1617
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*
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1618
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* Thin wrapper around [`chematic_rxn::retro::retro_disconnect`] -- applies
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1619
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* the same built-in 60-template SMIRKS library and returns identical
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1620
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* disconnections (same templates, same precursor sets, same ordering:
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1621
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* fewest precursors first) as the Rust and Python (`Mol.retro_disconnect()`)
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1622
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* APIs. This function changes nothing about the underlying algorithm; it
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1623
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* only serializes the result to JSON.
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1624
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*
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1625
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* `max_results` -- cap on returned disconnections (0 = unlimited).
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1626
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*
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1627
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* `reaction_class` -- filter to a single reaction class, or `""` for all
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1628
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* classes. Valid values: `"AmideBond"`, `"Ester"`, `"Ether"`, `"CNBond"`,
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1629
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* `"CCBond"`, `"CSBond"`, `"Other"`. An unrecognized non-empty value is a
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1630
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* JS error (not silently ignored).
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1631
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*
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1632
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* JSON schema: array of
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1633
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* `{"template":str,"reaction_class":str,"precursors":[str,...],"sa_scores":[number,...],"max_sa_score":number}`
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1634
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* -- same field names as the Python binding's dict output. Returns `[]`
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1635
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* when no template matches the molecule (e.g. it has no disconnectable
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1636
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* bond the template library recognizes) -- a valid, non-error result,
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1637
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* distinct from the `reaction_class` validation error above.
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1638
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*/
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1639
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export function retro_disconnect_json(mol: MolHandle, max_results: number, reaction_class: string): string;
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1640
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+
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1615
1641
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/**
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* Decompose a set of molecules against a core SMARTS, returning R-group SMILES.
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*
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@@ -2217,6 +2243,7 @@ export interface InitOutput {
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readonly rdkit_ecfp_config_bitvec: (a: number, b: number, c: number) => [number, number, number, number];
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2218
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readonly rdkit_ecfp_config_detail_json: (a: number, b: number, c: number) => [number, number, number, number];
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2219
2245
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readonly remove_hydrogens: (a: number) => number;
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2246
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+
readonly retro_disconnect_json: (a: number, b: number, c: number, d: number) => [number, number, number, number];
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readonly rgroup_decompose_json: (a: number, b: number, c: number, d: number) => [number, number, number, number];
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2221
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readonly ring_families_json: (a: number) => [number, number, number, number];
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readonly run_reactants: (a: number, b: number, c: number, d: number) => [number, number, number, number];
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package/chematic_wasm.js
CHANGED
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@@ -4058,6 +4058,56 @@ export function remove_hydrogens(mol) {
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return MolHandle.__wrap(ret);
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}
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+
/**
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* Single-step retrosynthetic disconnection (issue #91).
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4063
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*
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4064
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* Thin wrapper around [`chematic_rxn::retro::retro_disconnect`] -- applies
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4065
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+
* the same built-in 60-template SMIRKS library and returns identical
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4066
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+
* disconnections (same templates, same precursor sets, same ordering:
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4067
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* fewest precursors first) as the Rust and Python (`Mol.retro_disconnect()`)
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4068
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* APIs. This function changes nothing about the underlying algorithm; it
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4069
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* only serializes the result to JSON.
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4070
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*
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* `max_results` -- cap on returned disconnections (0 = unlimited).
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4072
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*
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* `reaction_class` -- filter to a single reaction class, or `""` for all
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* classes. Valid values: `"AmideBond"`, `"Ester"`, `"Ether"`, `"CNBond"`,
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4075
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* `"CCBond"`, `"CSBond"`, `"Other"`. An unrecognized non-empty value is a
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4076
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* JS error (not silently ignored).
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4077
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*
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* JSON schema: array of
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* `{"template":str,"reaction_class":str,"precursors":[str,...],"sa_scores":[number,...],"max_sa_score":number}`
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4080
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* -- same field names as the Python binding's dict output. Returns `[]`
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4081
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* when no template matches the molecule (e.g. it has no disconnectable
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4082
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* bond the template library recognizes) -- a valid, non-error result,
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4083
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* distinct from the `reaction_class` validation error above.
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4084
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* @param {MolHandle} mol
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* @param {number} max_results
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4086
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* @param {string} reaction_class
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4087
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* @returns {string}
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4088
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*/
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4089
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export function retro_disconnect_json(mol, max_results, reaction_class) {
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4090
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let deferred3_0;
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4091
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let deferred3_1;
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4092
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try {
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4093
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_assertClass(mol, MolHandle);
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4094
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const ptr0 = passStringToWasm0(reaction_class, wasm.__wbindgen_malloc, wasm.__wbindgen_realloc);
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4095
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const len0 = WASM_VECTOR_LEN;
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4096
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const ret = wasm.retro_disconnect_json(mol.__wbg_ptr, max_results, ptr0, len0);
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4097
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var ptr2 = ret[0];
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4098
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var len2 = ret[1];
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4099
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if (ret[3]) {
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4100
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ptr2 = 0; len2 = 0;
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4101
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throw takeFromExternrefTable0(ret[2]);
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4102
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}
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4103
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deferred3_0 = ptr2;
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4104
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deferred3_1 = len2;
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4105
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return getStringFromWasm0(ptr2, len2);
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4106
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} finally {
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4107
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wasm.__wbindgen_free(deferred3_0, deferred3_1, 1);
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4108
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}
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4109
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+
}
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4110
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+
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4061
4111
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/**
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4062
4112
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* Decompose a set of molecules against a core SMARTS, returning R-group SMILES.
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4063
4113
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*
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package/chematic_wasm_bg.wasm
CHANGED
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Binary file
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package/package.json
CHANGED
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@@ -5,7 +5,7 @@
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5
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"kent-tokyo <kent-tokyo@users.noreply.github.com>"
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],
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"description": "WebAssembly bindings for chematic — use chematic from JavaScript/TypeScript",
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8
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-
"version": "0.
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8
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+
"version": "0.8.1",
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"license": "MIT OR Apache-2.0",
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"repository": {
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"type": "git",
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