@justfortytwo/installer 1.0.0-8 → 1.0.0

package/dist/commands/status.js

@@ -9,7 +9,8 @@
 import { existsSync, readFileSync } from 'node:fs';
 import { join } from 'node:path';
 import { liveRuntime, serviceRunning } from '../runtime.js';
-import { defaultDoctorDeps, HEARTBEAT_STALE_MS } from './doctor.js';
+import { defaultDoctorDeps, extensionWiringProblems, readMcpExtensions, HEARTBEAT_STALE_MS } from './doctor.js';
+import { readInstalledVersion, readSelfCompatRanges } from '../engine.js';
 /** The status lines (pure, for tests). */
 export function statusLines(i) {
     const row = (label, value) => `${label.padEnd(11)}${value}`;
@@ -25,6 +26,8 @@ export function statusLines(i) {
         : hb ? `not running (last heartbeat ${hb.ts})`
             : 'not running'));
     lines.push(row('Memory', i.memoryConfigured ? 'configured via MCP (Claude Code starts it on demand)' : 'not configured (run `fortytwo init`)'));
+    for (const p of i.extensionProblems ?? [])
+        lines.push(row('Warning', p));
     return lines;
 }
 function memoryConfigured(root) {
@@ -46,6 +49,7 @@ export async function runStatus(_argv) {
         runtime,
         schedulerHeartbeat: defaultDoctorDeps().schedulerHeartbeat(),
         memoryConfigured: memoryConfigured(root),
+        extensionProblems: extensionWiringProblems(readMcpExtensions(root), (s) => readInstalledVersion(s, root), readSelfCompatRanges()),
         nowMs: Date.now(),
     });
     process.stdout.write(lines.join('\n') + '\n');

package/dist/commands/status.js.map

@@ -1 +1 @@
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+{"version":3,"file":"status.js","sourceRoot":"","sources":["../../src/commands/status.ts"],"names":[],"mappings":"AAAA,2DAA2D;AAC3D,EAAE;AACF,4EAA4E;AAC5E,gFAAgF;AAChF,gFAAgF;AAChF,mEAAmE;AACnE,4EAA4E;AAC5E,qEAAqE;AAErE,OAAO,EAAE,UAAU,EAAE,YAAY,EAAE,MAAM,SAAS,CAAC;AACnD,OAAO,EAAE,IAAI,EAAE,MAAM,WAAW,CAAC;AACjC,OAAO,EAAE,WAAW,EAAE,cAAc,EAAqB,MAAM,eAAe,CAAC;AAC/E,OAAO,EAAE,iBAAiB,EAAE,uBAAuB,EAAE,iBAAiB,EAAE,kBAAkB,EAAE,MAAM,aAAa,CAAC;AAChH,OAAO,EAAE,oBAAoB,EAAE,oBAAoB,EAAE,MAAM,cAAc,CAAC;AAW1E,0CAA0C;AAC1C,MAAM,UAAU,WAAW,CAAC,CAAc;IACxC,MAAM,GAAG,GAAG,CAAC,KAAa,EAAE,KAAa,EAAE,EAAE,CAAC,GAAG,KAAK,CAAC,MAAM,CAAC,EAAE,CAAC,GAAG,KAAK,EAAE,CAAC;IAC5E,MAAM,KAAK,GAAa,EAAE,CAAC;IAC3B,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,UAAU,EAAE,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,gBAAgB,CAAC,CAAC,OAAO,CAAC,GAAG,WAAW,CAAC,CAAC,OAAO,CAAC,SAAS,GAAG,CAAC,CAAC,CAAC,8CAA8C,CAAC,CAAC,CAAC;IAEzJ,MAAM,SAAS,GAAG,CAAC,CAAC,OAAO,EAAE,OAAO,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,UAAU,CAAC,CAAC;IACxE,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,UAAU,EAAE,cAAc,CAAC,CAAC,CAAC,OAAO,EAAE,UAAU,CAAC,CAAC,CAAC,CAAC,SAAS;QAC1E,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,gBAAgB,SAAS,CAAC,MAAM,GAAG;YACjD,CAAC,CAAC,aAAa,CAAC,CAAC,CAAC;IAEpB,MAAM,EAAE,GAAG,CAAC,CAAC,kBAAkB,CAAC;IAChC,MAAM,GAAG,GAAG,EAAE,CAAC,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,IAAI,CAAC,EAAE,CAAC,EAAE,CAAC,CAAC,OAAO,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC;IAChE,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,WAAW,EAAE,EAAE,IAAI,GAAG,IAAI,kBAAkB,CAAC,CAAC,CAAC,sBAAsB,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,IAAI,CAAC,KAAK,CAAC,GAAG,GAAG,IAAI,CAAC,CAAC,QAAQ;QAC7H,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,+BAA+B,EAAE,CAAC,EAAE,GAAG;YAC9C,CAAC,CAAC,aAAa,CAAC,CAAC,CAAC;IAEpB,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,QAAQ,EAAE,CAAC,CAAC,gBAAgB,CAAC,CAAC,CAAC,sDAAsD,CAAC,CAAC,CAAC,sCAAsC,CAAC,CAAC,CAAC;IAChJ,KAAK,MAAM,CAAC,IAAI,CAAC,CAAC,iBAAiB,IAAI,EAAE;QAAE,KAAK,CAAC,IAAI,CAAC,GAAG,CAAC,SAAS,EAAE,CAAC,CAAC,CAAC,CAAC;IACzE,OAAO,KAAK,CAAC;AACf,CAAC;AAED,SAAS,gBAAgB,CAAC,IAAY;IACpC,MAAM,IAAI,GAAG,IAAI,CAAC,IAAI,EAAE,WAAW,CAAC,CAAC;IACrC,IAAI,CAAC,UAAU,CAAC,IAAI,CAAC;QAAE,OAAO,KAAK,CAAC;IACpC,IAAI,CAAC;QACH,MAAM,GAAG,GAAG,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,IAAI,EAAE,MAAM,CAAC,CAA6C,CAAC;QAC/F,OAAO,CAAC,CAAC,GAAG,CAAC,UAAU,EAAE,CAAC,iBAAiB,CAAC,CAAC;IAC/C,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,KAAK,CAAC;IACf,CAAC;AACH,CAAC;AAED,MAAM,CAAC,KAAK,UAAU,SAAS,CAAC,KAAe;IAC7C,MAAM,IAAI,GAAG,OAAO,CAAC,GAAG,EAAE,CAAC;IAC3B,MAAM,OAAO,GAAG,WAAW,CAAC,IAAI,CAAC,CAAC;IAClC,MAAM,KAAK,GAAG,WAAW,CAAC;QACxB,OAAO;QACP,kBAAkB,EAAE,iBAAiB,EAAE,CAAC,kBAAkB,EAAE;QAC5D,gBAAgB,EAAE,gBAAgB,CAAC,IAAI,CAAC;QACxC,iBAAiB,EAAE,uBAAuB,CAAC,iBAAiB,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC,EAAE,EAAE,CAAC,oBAAoB,CAAC,CAAC,EAAE,IAAI,CAAC,EAAE,oBAAoB,EAAE,CAAC;QACjI,KAAK,EAAE,IAAI,CAAC,GAAG,EAAE;KAClB,CAAC,CAAC;IACH,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,GAAG,IAAI,CAAC,CAAC;IAC9C,OAAO,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;AACzB,CAAC"}

package/dist/commands/stop.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"stop.d.ts","sourceRoot":"","sources":["../../src/commands/stop.ts"],"names":[],"mappings":"AAWA,wBAAsB,OAAO,CAAC,KAAK,EAAE,MAAM,EAAE,EAAE,IAAI,GAAE;IAAE,SAAS,CAAC,EAAE,MAAM,CAAA;CAAO,GAAG,OAAO,CAAC,MAAM,CAAC,CAuBjG"}
+{"version":3,"file":"stop.d.ts","sourceRoot":"","sources":["../../src/commands/stop.ts"],"names":[],"mappings":"AAWA,wBAAsB,OAAO,CAAC,KAAK,EAAE,MAAM,EAAE,EAAE,IAAI,GAAE;IAAE,SAAS,CAAC,EAAE,MAAM,CAAA;CAAO,GAAG,OAAO,CAAC,MAAM,CAAC,CAyBjG"}

package/dist/commands/stop.js

@@ -1,10 +1,10 @@
 // stop — stop a `fortytwo start` running for this project.
 //
 // Signals ONLY the supervisor recorded in .fortytwo/runtime.json, and only while
-// its heartbeat is fresh (see runtime.ts), so a stale file can never hit a
-// reused pid. It never searches for or kills processes by name. The supervisor
+// its heartbeat is fresh and OS process identity matches (see runtime.ts).
+// It never searches for or kills processes by name. The supervisor
 // then stops its own services. Under Docker/systemd prefer their own stop.
-import { isPidAlive, liveRuntime } from '../runtime.js';
+import { sameRuntimeProcess, liveRuntime } from '../runtime.js';
 const sleep = (ms) => new Promise((r) => setTimeout(r, ms));
 export async function runStop(_argv, opts = {}) {
     const runtime = liveRuntime(process.cwd());
@@ -13,6 +13,9 @@ export async function runStop(_argv, opts = {}) {
         return 0;
     }
     process.stdout.write(`Stopping fortytwo (pid ${runtime.pid})…\n`);
+    // Revalidate the original generation immediately before signalling.
+    if (!sameRuntimeProcess(runtime))
+        return 0;
     try {
         process.kill(runtime.pid, 'SIGTERM');
     }
@@ -22,7 +25,7 @@ export async function runStop(_argv, opts = {}) {
     }
     const deadline = Date.now() + (opts.timeoutMs ?? 20_000);
     while (Date.now() < deadline) {
-        if (!isPidAlive(runtime.pid)) {
+        if (!sameRuntimeProcess(runtime)) {
             process.stdout.write('fortytwo stopped.\n');
             return 0;
         }

package/dist/commands/stop.js.map

@@ -1 +1 @@
-{"version":3,"file":"stop.js","sourceRoot":"","sources":["../../src/commands/stop.ts"],"names":[],"mappings":"AAAA,2DAA2D;AAC3D,EAAE;AACF,iFAAiF;AACjF,2EAA2E;AAC3E,+EAA+E;AAC/E,2EAA2E;AAE3E,OAAO,EAAE,UAAU,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAExD,MAAM,KAAK,GAAG,CAAC,EAAU,EAAE,EAAE,CAAC,IAAI,OAAO,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,UAAU,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC;AAEpE,MAAM,CAAC,KAAK,UAAU,OAAO,CAAC,KAAe,EAAE,OAA+B,EAAE;IAC9E,MAAM,OAAO,GAAG,WAAW,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC,CAAC;IAC3C,IAAI,CAAC,OAAO,EAAE,CAAC;QACb,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,4BAA4B,CAAC,CAAC;QACnD,OAAO,CAAC,CAAC;IACX,CAAC;IACD,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,0BAA0B,OAAO,CAAC,GAAG,MAAM,CAAC,CAAC;IAClE,IAAI,CAAC;QACH,OAAO,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;IACvC,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,8BAA8B,OAAO,CAAC,GAAG,KAAM,GAAa,CAAC,OAAO,IAAI,CAAC,CAAC;QAC/F,OAAO,CAAC,CAAC;IACX,CAAC;IACD,MAAM,QAAQ,GAAG,IAAI,CAAC,GAAG,EAAE,GAAG,CAAC,IAAI,CAAC,SAAS,IAAI,MAAM,CAAC,CAAC;IACzD,OAAO,IAAI,CAAC,GAAG,EAAE,GAAG,QAAQ,EAAE,CAAC;QAC7B,IAAI,CAAC,UAAU,CAAC,OAAO,CAAC,GAAG,CAAC,EAAE,CAAC;YAC7B,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,qBAAqB,CAAC,CAAC;YAC5C,OAAO,CAAC,CAAC;QACX,CAAC;QACD,MAAM,KAAK,CAAC,GAAG,CAAC,CAAC;IACnB,CAAC;IACD,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,uBAAuB,OAAO,CAAC,GAAG,qCAAqC,CAAC,CAAC;IAC9F,OAAO,CAAC,CAAC;AACX,CAAC"}
+{"version":3,"file":"stop.js","sourceRoot":"","sources":["../../src/commands/stop.ts"],"names":[],"mappings":"AAAA,2DAA2D;AAC3D,EAAE;AACF,iFAAiF;AACjF,2EAA2E;AAC3E,mEAAmE;AACnE,2EAA2E;AAE3E,OAAO,EAAE,kBAAkB,EAAE,WAAW,EAAE,MAAM,eAAe,CAAC;AAEhE,MAAM,KAAK,GAAG,CAAC,EAAU,EAAE,EAAE,CAAC,IAAI,OAAO,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,UAAU,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC;AAEpE,MAAM,CAAC,KAAK,UAAU,OAAO,CAAC,KAAe,EAAE,OAA+B,EAAE;IAC9E,MAAM,OAAO,GAAG,WAAW,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC,CAAC;IAC3C,IAAI,CAAC,OAAO,EAAE,CAAC;QACb,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,4BAA4B,CAAC,CAAC;QACnD,OAAO,CAAC,CAAC;IACX,CAAC;IACD,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,0BAA0B,OAAO,CAAC,GAAG,MAAM,CAAC,CAAC;IAClE,oEAAoE;IACpE,IAAI,CAAC,kBAAkB,CAAC,OAAO,CAAC;QAAE,OAAO,CAAC,CAAC;IAC3C,IAAI,CAAC;QACH,OAAO,CAAC,IAAI,CAAC,OAAO,CAAC,GAAG,EAAE,SAAS,CAAC,CAAC;IACvC,CAAC;IAAC,OAAO,GAAG,EAAE,CAAC;QACb,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,8BAA8B,OAAO,CAAC,GAAG,KAAM,GAAa,CAAC,OAAO,IAAI,CAAC,CAAC;QAC/F,OAAO,CAAC,CAAC;IACX,CAAC;IACD,MAAM,QAAQ,GAAG,IAAI,CAAC,GAAG,EAAE,GAAG,CAAC,IAAI,CAAC,SAAS,IAAI,MAAM,CAAC,CAAC;IACzD,OAAO,IAAI,CAAC,GAAG,EAAE,GAAG,QAAQ,EAAE,CAAC;QAC7B,IAAI,CAAC,kBAAkB,CAAC,OAAO,CAAC,EAAE,CAAC;YACjC,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,qBAAqB,CAAC,CAAC;YAC5C,OAAO,CAAC,CAAC;QACX,CAAC;QACD,MAAM,KAAK,CAAC,GAAG,CAAC,CAAC;IACnB,CAAC;IACD,OAAO,CAAC,MAAM,CAAC,KAAK,CAAC,uBAAuB,OAAO,CAAC,GAAG,qCAAqC,CAAC,CAAC;IAC9F,OAAO,CAAC,CAAC;AACX,CAAC"}

package/dist/commands/update.d.ts

@@ -1,5 +1,12 @@
 import { type VersionPin, type InstallState } from '../state.js';
 import { type CheckResult } from './doctor.js';
+import { type MigrationResult } from '../transcript-migration.js';
+/**
+ * Siblings that extend memory: when memory is installed and this CLI declares
+ * one the project lacks, update installs it (it is new to the contract, not a
+ * sibling the user chose to omit).
+ */
+export declare const MEMORY_COMPANIONS: readonly string[];
 /** Semver precedence (-1 / 0 / 1), pre-release aware (`1.0.0-0 < 1.0.0`). */
 export declare function compareVersions(a: string, b: string): number;
 /** Highest version in `versions` that satisfies `range`, or null if none do. */
@@ -11,7 +18,13 @@ export interface InstallResult {
     detail: string;
 }
 export interface UpdateDeps {
+    /** Running CLI, not the target project package; optional for embedded callers. */
+    runningInstallerVersion?: () => string | null;
+    persistInstaller?: (exactSpec: string) => InstallResult;
     readState: () => InstallState | null;
+    runtimeActive?: () => boolean;
+    /** Pre-change sanity check (e.g. .mcp.json parses); a message aborts before anything changes. */
+    preflight?: () => string | null;
     installedVersion: (spec: string) => string | null;
     /** spec -> declared semver range (this CLI's fortytwo.compat). */
     compatRanges: Record<string, string>;
@@ -26,8 +39,8 @@ export interface UpdateDeps {
     }>;
     /** Persist the resolved set, rotating current -> previous. */
     record: (pins: VersionPin[]) => void;
-    /** Re-render the persona scaffold (idempotent). */
-    render: () => void;
+    /** Reconcile machine-owned runtime assets; never render persona context. */
+    reconcile: () => Promise<void>;
     out: (s: string) => void;
     err: (s: string) => void;
 }
@@ -46,6 +59,12 @@ export declare function performUpdate(deps: UpdateDeps, flags: {
     dryRun?: boolean;
 }): Promise<number>;
 export declare function performRollback(deps: RollbackDeps): Promise<number>;
+/**
+ * Post-update reconciliation of machine-owned runtime assets. The memory MCP
+ * entry is re-wired FIRST (with the transcript extension when installed), so
+ * moving chat out of memory never leaves the agent without transcript search.
+ */
+export declare function reconcileRuntime(root: string): Promise<MigrationResult>;
 /** Published versions of a package via `npm view`; [] if unknown/unreachable. */
 export declare function fetchPublishedVersions(pkg: string): Promise<string[]>;
 export declare function runUpdate(argv: string[]): Promise<number>;

package/dist/commands/update.d.ts.map

@@ -1 +1 @@
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package/dist/commands/update.js

@@ -3,23 +3,37 @@
 // Distribution policy: "semver ranges, latest-compatible". There is NO curated
 // bill-of-materials. update:
 //   1. RESOLVE latest-in-range for every installed @justfortytwo/* sibling
-//      (the ranges in this CLI's fortytwo.compat).
+//      (the ranges in this CLI's fortytwo.compat), plus any memory companion
+//      (transcript) this CLI declares but the project lacks, when memory is
+//      installed — otherwise chat would silently stop being recorded.
 //   2. INSTALL that set (npm).
 //   3. ROTATE the ledger (state.json: previous := the pre-update set) the moment
 //      the install lands, so rollback always targets the set that was running.
 //   4. POST-VERIFY with doctor. On failure: leave the new set in place but LOUDLY
 //      point at `fortytwo rollback` — rollback is MANUAL by design (never auto-
-//      revert, so the user can inspect first). On success: re-render the persona
-//      scaffold (idempotent) in case a new template version shipped.
+//      revert, so the user can inspect first). On success: reconcile machine-owned
+//      runtime assets only, then print doctor's view of the reconciled project.
+//      Existing context is never re-rendered by update.
 //
 // rollback re-installs state.json's `previous` set and rotates the ledger back.
 // Both share the resolve/install primitives below and are unit-tested through an
 // injected `*Deps` (so no test touches the network or the real npm).
 import { spawnSync } from 'node:child_process';
-import { recordVersionSet, readState, readIdentity, } from '../state.js';
-import { compareSemver, readInstalledVersion, readSelfCompatRanges, satisfiesRange } from '../engine.js';
+import { isPidAlive, liveRuntime } from '../runtime.js';
+import { HEARTBEAT_STALE_MS } from './doctor.js';
+import { recordVersionSet, readState, } from '../state.js';
+import { compareSemver, readInstalledVersion, readSelfCompatRanges, readSelfVersion, satisfiesRange } from '../engine.js';
 import { runDoctorChecks, defaultDoctorDeps } from './doctor.js';
-import { renderPersona } from '../render.js';
+import { reconcileOneiros } from '../oneiros.js';
+import { migrateChatSafely } from '../transcript-migration.js';
+import { readProjectSetting, readMcpJson, writeMcpJson, DEFAULT_DB_PATH, DEFAULT_OLLAMA_BASE_URL, CLI_PACKAGE, cliInstallSpec, TRANSCRIPT_PACKAGE, } from './init.js';
+const MEMORY_PACKAGE = '@justfortytwo/memory';
+/**
+ * Siblings that extend memory: when memory is installed and this CLI declares
+ * one the project lacks, update installs it (it is new to the contract, not a
+ * sibling the user chose to omit).
+ */
+export const MEMORY_COMPANIONS = [TRANSCRIPT_PACKAGE];
 // --- pure: pick the latest published version satisfying a range ---
 /** Semver precedence (-1 / 0 / 1), pre-release aware (`1.0.0-0 < 1.0.0`). */
 export function compareVersions(a, b) {
@@ -54,14 +68,52 @@ export async function performUpdate(deps, flags) {
         deps.err('update: no install found — run `fortytwo init` first.\n');
         return 2;
     }
+    if (!flags.dryRun && deps.runtimeActive?.()) {
+        deps.err('update: stop the running runtime first (`fortytwo stop`, or your service manager), run `fortytwo update`, then `fortytwo start`. No packages or context were changed.\n');
+        return 1;
+    }
+    const blocked = deps.preflight?.();
+    if (blocked) {
+        deps.err(`update: ${blocked}\nNothing was installed or recorded.\n`);
+        return 1;
+    }
+    if (deps.runningInstallerVersion) {
+        const running = deps.runningInstallerVersion();
+        const installed = deps.installedVersion(CLI_PACKAGE);
+        if (!running || !deps.persistInstaller) {
+            deps.err('update: cannot determine or persist the running installer version.\n');
+            return 1;
+        }
+        if (installed && compareVersions(running, installed) < 0) {
+            deps.err('update: the project installer is newer than this command. Use the project-local fortytwo update.\n');
+            return 1;
+        }
+        const spec = cliInstallSpec(running, installed);
+        if (spec) {
+            deps.out(`update: pin project installer to ${spec}${flags.dryRun ? ' (dry-run)' : ''}\n`);
+            if (!flags.dryRun) {
+                const result = deps.persistInstaller(spec);
+                if (!result.ok) {
+                    deps.err(`update: installer persistence failed (${result.detail}). Retry update before starting services.\n`);
+                    return 1;
+                }
+            }
+        }
+    }
     // The engine = the declared compat siblings that are CURRENTLY installed. We
     // upgrade what's there; we don't pull in siblings the user deliberately omitted.
+    // Exception: memory companions (transcript) join the set whenever memory is
+    // installed, so an update onto a CLI that declares them actually installs them.
+    const memoryInstalled = deps.installedVersion(MEMORY_PACKAGE) !== null;
     const ranges = {};
     const current = [];
     for (const [name, range] of Object.entries(deps.compatRanges)) {
         const resolved = deps.installedVersion(name);
-        if (resolved === null)
+        if (resolved === null) {
+            if (memoryInstalled && MEMORY_COMPANIONS.includes(name))
+                ranges[name] = range;
             continue;
+        }
         ranges[name] = range;
         current.push({ name, range, resolved });
     }
@@ -73,6 +125,8 @@ export async function performUpdate(deps, flags) {
     const versionOf = (pins, name) => pins.find((p) => p.name === name)?.resolved;
     const changed = target.filter((t) => versionOf(current, t.name) !== t.resolved);
     if (changed.length === 0) {
+        if (!flags.dryRun)
+            await deps.reconcile();
         deps.out('update: already at the latest in-range version:\n' +
             current.map((p) => `  ${p.name}@${p.resolved} (${p.range})`).join('\n') + '\n');
         return 0;
@@ -80,7 +134,9 @@ export async function performUpdate(deps, flags) {
     deps.out('update: resolving latest-in-range →\n' +
         target.map((t) => {
             const from = versionOf(current, t.name);
-            return `  ${t.name}: ${from && from !== t.resolved ? `${from} → ${t.resolved}` : `${t.resolved} (unchanged)`}`;
+            if (!from)
+                return `  ${t.name}: ${t.resolved} (new)`;
+            return `  ${t.name}: ${from !== t.resolved ? `${from} → ${t.resolved}` : `${t.resolved} (unchanged)`}`;
         }).join('\n') + '\n');
     if (flags.dryRun) {
         deps.out('update: --dry-run, nothing installed.\n');
@@ -95,14 +151,24 @@ export async function performUpdate(deps, flags) {
     }
     // Install landed → rotate the ledger so `previous` = the pre-update set.
     deps.record(target);
+    const failed = '\nupdate: installed, but doctor reports required checks FAILED. Inspect, then run `fortytwo rollback` to restore the previous set.\n';
+    const pre = await deps.doctor();
+    if (!pre.ok) {
+        printChecks(pre.results, deps.out);
+        deps.err(failed);
+        return 1;
+    }
+    // Reconcile (re-wire .mcp.json, oneiros, chat migration), then report doctor's
+    // view of the RECONCILED project: the pre-reconcile run would still flag the
+    // extension wiring that reconcile just fixed.
+    await deps.reconcile();
     const { results, ok } = await deps.doctor();
     printChecks(results, deps.out);
     if (!ok) {
-        deps.err('\nupdate: installed, but doctor reports required checks FAILED. Inspect, then run `fortytwo rollback` to restore the previous set.\n');
+        deps.err(failed);
         return 1;
     }
-    deps.render();
-    deps.out('\nupdate: healthy — engine upgraded.\n');
+    deps.out('\nupdate: healthy — engine upgraded. Start services with `fortytwo start` (or your service manager).\n');
     return 0;
 }
 export async function performRollback(deps) {
@@ -129,6 +195,27 @@ export async function performRollback(deps) {
     return ok ? 0 : 1;
 }
 // --- real wiring ---
+/** The Ollama URL the memory server runs with now (its .mcp.json env), else .env, else the default. */
+function currentOllamaBaseUrl(root) {
+    const cfg = readMcpJson(root);
+    const url = cfg?.mcpServers?.['fortytwo-memory']?.env?.OLLAMA_BASE_URL;
+    if (typeof url === 'string' && url.trim())
+        return url;
+    return readProjectSetting('OLLAMA_BASE_URL', root) ?? DEFAULT_OLLAMA_BASE_URL;
+}
+/**
+ * Post-update reconciliation of machine-owned runtime assets. The memory MCP
+ * entry is re-wired FIRST (with the transcript extension when installed), so
+ * moving chat out of memory never leaves the agent without transcript search.
+ */
+export async function reconcileRuntime(root) {
+    const dbPath = readProjectSetting('DB_PATH', root) ?? DEFAULT_DB_PATH;
+    writeMcpJson(root, dbPath, currentOllamaBaseUrl(root));
+    await reconcileOneiros(root, dbPath);
+    // A failed migration (malformed row, SQLITE_BUSY) is reported, never fatal:
+    // memory stays intact and a later init/update retries it.
+    return migrateChatSafely(root, dbPath);
+}
 /** Published versions of a package via `npm view`; [] if unknown/unreachable. */
 export function fetchPublishedVersions(pkg) {
     return Promise.resolve().then(() => {
@@ -144,8 +231,8 @@ export function fetchPublishedVersions(pkg) {
         }
     });
 }
-function npmInstall(specs, root) {
-    const res = spawnSync('npm', ['install', '--no-audit', '--no-fund', ...specs], { cwd: root, stdio: 'inherit' });
+function npmInstall(specs, root, flags = []) {
+    const res = spawnSync('npm', ['install', '--no-audit', '--no-fund', ...flags, ...specs], { cwd: root, stdio: 'inherit' });
     if (res.status === 0)
         return { ok: true, detail: 'ok' };
     return { ok: false, detail: res.error ? res.error.message : `npm exited ${res.status}` };
@@ -156,15 +243,37 @@ function parseUpdateArgs(argv) {
 export async function runUpdate(argv) {
     const root = process.cwd();
     const deps = {
+        runningInstallerVersion: readSelfVersion,
+        persistInstaller: (spec) => npmInstall([spec], root, ['--save-exact']),
         readState: () => readState(root),
+        preflight: () => {
+            try {
+                readMcpJson(root);
+                return null;
+            }
+            catch (err) {
+                return err.message;
+            }
+        },
+        runtimeActive: () => {
+            if (liveRuntime(root))
+                return true;
+            const heartbeat = defaultDoctorDeps().schedulerHeartbeat();
+            return !!heartbeat && Date.now() - Date.parse(heartbeat.ts) <= HEARTBEAT_STALE_MS && isPidAlive(heartbeat.pid);
+        },
         installedVersion: readInstalledVersion,
         compatRanges: readSelfCompatRanges(),
         fetchVersions: fetchPublishedVersions,
         install: (specs) => npmInstall(specs, root),
         doctor: () => runDoctorChecks(defaultDoctorDeps()),
         record: (pins) => { recordVersionSet(pins, root); },
-        render: () => { const id = readIdentity(root); if (id)
-            renderPersona(id, { root }); },
+        reconcile: async () => {
+            const { moved, error } = await reconcileRuntime(root);
+            if (moved > 0)
+                process.stdout.write(`update: moved ${moved} chat row(s) from memory to the transcript\n`);
+            if (error)
+                process.stderr.write(`update: chat migration skipped: ${error} (memory left intact; fix the cause and re-run \`fortytwo update\`)\n`);
+        },
         out: (s) => process.stdout.write(s),
         err: (s) => process.stderr.write(s),
     };

package/dist/commands/update.js.map

@@ -1 +1 @@
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package/dist/oneiros.d.ts

@@ -0,0 +1,2 @@
+export declare function reconcileOneiros(root: string, dbPath: string): Promise<void>;
+//# sourceMappingURL=oneiros.d.ts.map

package/dist/oneiros.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"oneiros.d.ts","sourceRoot":"","sources":["../src/oneiros.ts"],"names":[],"mappings":"AAgBA,wBAAsB,gBAAgB,CAAC,IAAI,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAelF"}

package/dist/oneiros.js

@@ -0,0 +1,28 @@
+// Additive runtime reconciliation: never renders or writes owner context.
+import { mkdirSync } from 'node:fs';
+import { dirname, resolve } from 'node:path';
+import { findSiblingDir, loadSibling } from './engine.js';
+export async function reconcileOneiros(root, dbPath) {
+    // Respect intentionally partial installs. Installed-but-broken packages fail loud.
+    const specs = ['@justfortytwo/persona', '@justfortytwo/memory', '@justfortytwo/scheduler'];
+    if (specs.some(s => !findSiblingDir(s, root)))
+        return;
+    const persona = await loadSibling(specs[0], root);
+    const memory = await loadSibling(specs[1], root);
+    const scheduler = await loadSibling(specs[2], root);
+    if (!persona?.initialize || !memory?.memoryHead || !scheduler?.seedOneiros)
+        throw new Error('Oneiros requires compatible persona, memory and scheduler packages');
+    const path = resolve(root, dbPath);
+    mkdirSync(dirname(path), { recursive: true });
+    const h = memory.openDb(path);
+    try {
+        await memory.runMigrations(h.k);
+        persona.initialize(root, memory.memoryHead(h));
+        scheduler.seedOneiros(h, new Date().toISOString(), scheduler.recurrenceNext);
+    }
+    finally {
+        await h.k.destroy();
+        h.raw.close();
+    }
+}
+//# sourceMappingURL=oneiros.js.map

package/dist/oneiros.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"oneiros.js","sourceRoot":"","sources":["../src/oneiros.ts"],"names":[],"mappings":"AAAA,0EAA0E;AAC1E,OAAO,EAAE,SAAS,EAAE,MAAM,SAAS,CAAC;AACpC,OAAO,EAAE,OAAO,EAAE,OAAO,EAAE,MAAM,WAAW,CAAC;AAC7C,OAAO,EAAE,cAAc,EAAE,WAAW,EAAE,MAAM,aAAa,CAAC;AAa1D,MAAM,CAAC,KAAK,UAAU,gBAAgB,CAAC,IAAY,EAAE,MAAc;IACjE,mFAAmF;IACnF,MAAM,KAAK,GAAG,CAAC,uBAAuB,EAAE,sBAAsB,EAAE,yBAAyB,CAAC,CAAC;IAC3F,IAAI,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,cAAc,CAAC,CAAC,EAAC,IAAI,CAAC,CAAC;QAAE,OAAO;IACrD,MAAM,OAAO,GAAG,MAAM,WAAW,CAAU,KAAK,CAAC,CAAC,CAAE,EAAC,IAAI,CAAC,CAAC;IAC3D,MAAM,MAAM,GAAG,MAAM,WAAW,CAAS,KAAK,CAAC,CAAC,CAAE,EAAC,IAAI,CAAC,CAAC;IACzD,MAAM,SAAS,GAAG,MAAM,WAAW,CAAY,KAAK,CAAC,CAAC,CAAE,EAAC,IAAI,CAAC,CAAC;IAC/D,IAAI,CAAC,OAAO,EAAE,UAAU,IAAI,CAAC,MAAM,EAAE,UAAU,IAAI,CAAC,SAAS,EAAE,WAAW;QAAE,MAAM,IAAI,KAAK,CAAC,oEAAoE,CAAC,CAAC;IAClK,MAAM,IAAI,GAAG,OAAO,CAAC,IAAI,EAAC,MAAM,CAAC,CAAC;IAAC,SAAS,CAAC,OAAO,CAAC,IAAI,CAAC,EAAC,EAAC,SAAS,EAAC,IAAI,EAAC,CAAC,CAAC;IAC7E,MAAM,CAAC,GAAG,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,CAAC;IAC9B,IAAI,CAAC;QACH,MAAM,MAAM,CAAC,aAAa,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC;QAChC,OAAO,CAAC,UAAU,CAAC,IAAI,EAAC,MAAM,CAAC,UAAU,CAAC,CAAC,CAAC,CAAC,CAAC;QAC9C,SAAS,CAAC,WAAW,CAAC,CAAC,EAAC,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,EAAC,SAAS,CAAC,cAAc,CAAC,CAAC;IAC7E,CAAC;YAAS,CAAC;QAAC,MAAM,CAAC,CAAC,CAAC,CAAC,OAAO,EAAE,CAAC;QAAC,CAAC,CAAC,GAAG,CAAC,KAAK,EAAE,CAAC;IAAC,CAAC;AACnD,CAAC"}

package/dist/process-identity.d.ts

@@ -0,0 +1,3 @@
+/** null means identity cannot be established; never fall back to PID existence. */
+export declare function readProcessIdentity(pid: number, platform?: NodeJS.Platform): string | null;
+//# sourceMappingURL=process-identity.d.ts.map

package/dist/process-identity.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"process-identity.d.ts","sourceRoot":"","sources":["../src/process-identity.ts"],"names":[],"mappings":"AAIA,mFAAmF;AACnF,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,MAAM,EAAE,QAAQ,GAAE,MAAM,CAAC,QAA2B,GAAG,MAAM,GAAG,IAAI,CA6B5G"}

package/dist/process-identity.js

@@ -0,0 +1,42 @@
+// OS process generation identity, independent of the project's heartbeat.
+import { readFileSync, readlinkSync } from 'node:fs';
+import { spawnSync } from 'node:child_process';
+/** null means identity cannot be established; never fall back to PID existence. */
+export function readProcessIdentity(pid, platform = process.platform) {
+    if (!Number.isSafeInteger(pid) || pid <= 0)
+        return null;
+    try {
+        if (platform === 'linux') {
+            const stat = readFileSync(`/proc/${pid}/stat`, 'utf8');
+            // comm (field 2) is parenthesized, but may itself contain ')' or whitespace.
+            const end = stat.lastIndexOf(')');
+            if (!stat.startsWith(`${pid} (`) || end < 0)
+                return null;
+            const fields = stat.slice(end + 1).trim().split(/\s+/);
+            const start = fields[19]; // fields[0] is state (field 3); starttime is field 22
+            if (!start || !/^\d+$/.test(start) || ['Z', 'X', 'x'].includes(fields[0] ?? ''))
+                return null;
+            const boot = readFileSync('/proc/sys/kernel/random/boot_id', 'utf8').trim();
+            const namespace = readlinkSync(`/proc/${pid}/ns/pid`);
+            if (!boot || !/^pid:\[\d+\]$/.test(namespace))
+                return null;
+            return `linux:${boot}:${namespace}:${start}`;
+        }
+        // BSD/macOS ps exposes an OS-derived start time (second resolution).
+        // Fix locale/timezone so callers with different environments compare equally.
+        const result = spawnSync('ps', ['-p', String(pid), '-o', 'lstart='], {
+            encoding: 'utf8', timeout: 2000, env: { ...process.env, LC_ALL: 'C', TZ: 'UTC' },
+            stdio: ['ignore', 'pipe', 'ignore'],
+        });
+        if (result.error || result.status !== 0)
+            return null;
+        const start = result.stdout.trim().replace(/\s+/g, ' ');
+        if (!/^[A-Z][a-z]{2} [A-Z][a-z]{2} \d{1,2} \d{2}:\d{2}:\d{2} \d{4}$/.test(start))
+            return null;
+        return `ps:${platform}:${start}`;
+    }
+    catch {
+        return null;
+    }
+}
+//# sourceMappingURL=process-identity.js.map

package/dist/process-identity.js.map

@@ -0,0 +1 @@
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package/dist/runtime.d.ts

@@ -33,6 +33,8 @@ export declare function planServices(root: string, env: NodeJS.ProcessEnv, specs
 export interface RuntimeState {
     /** The `fortytwo start` supervisor process. */
     pid: number;
+    /** OS process generation; absent in legacy records, which are not trusted. */
+    processIdentity?: string;
     startedAt: string;
     /** Refreshed every few seconds while the supervisor is alive. */
     heartbeatAt: string;
@@ -48,7 +50,9 @@ export declare const RUNTIME_STALE_MS = 30000;
 export declare function runtimeStatePath(root: string): string;
 export declare function readRuntimeState(root: string): RuntimeState | null;
 export declare function isPidAlive(pid: number): boolean;
-/** The running supervisor's state, or null if none: no file, stale heartbeat, or dead pid. */
+/** Match a recorded process generation, including when waiting for shutdown. */
+export declare function sameRuntimeProcess(state: RuntimeState, alive?: (pid: number) => boolean, identity?: (pid: number) => string | null): boolean;
+/** A live supervisor requires a fresh heartbeat AND the same OS process. */
 export declare function liveRuntime(root: string, nowMs?: number, alive?: (pid: number) => boolean): RuntimeState | null;
 /** True when a live `fortytwo start` is currently running the named service. */
 export declare function serviceRunning(state: RuntimeState | null, name: string): boolean;

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