@jupyterlite/services 0.1.0 → 0.7.0-rc.0

package/lib/contents/drivefs.js

@@ -0,0 +1,481 @@
+// Copyright (c) Jupyter Development Team.
+// Distributed under the terms of the Modified BSD License.
+import { UUID } from '@lumino/coreutils';
+import { DIR_MODE, SEEK_CUR, SEEK_END, instanceOfStream, } from './emscripten';
+export const DRIVE_SEPARATOR = ':';
+export const BLOCK_SIZE = 4096;
+const encoder = new TextEncoder();
+const decoder = new TextDecoder('utf-8');
+// Mapping flag -> do we need to overwrite the file upon closing it
+const flagNeedsWrite = {
+    0 /*O_RDONLY*/: false,
+    1 /*O_WRONLY*/: true,
+    2 /*O_RDWR*/: true,
+    64 /*O_CREAT*/: true,
+    65 /*O_WRONLY|O_CREAT*/: true,
+    66 /*O_RDWR|O_CREAT*/: true,
+    129 /*O_WRONLY|O_EXCL*/: true,
+    193 /*O_WRONLY|O_CREAT|O_EXCL*/: true,
+    514 /*O_RDWR|O_TRUNC*/: true,
+    577 /*O_WRONLY|O_CREAT|O_TRUNC*/: true,
+    578 /*O_CREAT|O_RDWR|O_TRUNC*/: true,
+    705 /*O_WRONLY|O_CREAT|O_EXCL|O_TRUNC*/: true,
+    706 /*O_RDWR|O_CREAT|O_EXCL|O_TRUNC*/: true,
+    1024 /*O_APPEND*/: true,
+    1025 /*O_WRONLY|O_APPEND*/: true,
+    1026 /*O_RDWR|O_APPEND*/: true,
+    1089 /*O_WRONLY|O_CREAT|O_APPEND*/: true,
+    1090 /*O_RDWR|O_CREAT|O_APPEND*/: true,
+    1153 /*O_WRONLY|O_EXCL|O_APPEND*/: true,
+    1154 /*O_RDWR|O_EXCL|O_APPEND*/: true,
+    1217 /*O_WRONLY|O_CREAT|O_EXCL|O_APPEND*/: true,
+    1218 /*O_RDWR|O_CREAT|O_EXCL|O_APPEND*/: true,
+    4096 /*O_RDONLY|O_DSYNC*/: true,
+    4098 /*O_RDWR|O_DSYNC*/: true,
+};
+export class DriveFSEmscriptenStreamOps {
+    constructor(fs) {
+        this.fs = fs;
+    }
+    open(stream) {
+        var _a;
+        const path = this.fs.realPath(stream.node);
+        if (this.fs.FS.isFile(stream.node.mode)) {
+            try {
+                const file = this.fs.API.get(path);
+                stream.file = file;
+            }
+            catch (e) {
+                // If we're opening a file for writing and the file does not exist, create it! Otherwise, throw the proper error
+                // We need to do this because the current thread is thinking a file exist (isFile returns true)
+                // whilst it was actually deleted in the main thread
+                // if writing
+                const flags = (_a = stream.flags) !== null && _a !== void 0 ? _a : stream.shared.flags;
+                let parsedFlags = typeof flags === 'string' ? parseInt(flags, 10) : flags;
+                parsedFlags &= 0x1fff;
+                let needsWrite = true;
+                if (parsedFlags in flagNeedsWrite) {
+                    needsWrite = flagNeedsWrite[parsedFlags];
+                }
+                if (needsWrite) {
+                    stream.node = this.fs.node_ops.mknod(stream.node.parent, stream.node.name, stream.node.mode, 0);
+                    const file = this.fs.API.get(path);
+                    stream.file = file;
+                }
+                else {
+                    throw new this.fs.FS.ErrnoError(this.fs.ERRNO_CODES['ENOENT']);
+                }
+            }
+        }
+    }
+    close(stream) {
+        var _a;
+        if (!this.fs.FS.isFile(stream.node.mode) || !stream.file) {
+            return;
+        }
+        const path = this.fs.realPath(stream.node);
+        const flags = (_a = stream.flags) !== null && _a !== void 0 ? _a : stream.shared.flags;
+        let parsedFlags = typeof flags === 'string' ? parseInt(flags, 10) : flags;
+        parsedFlags &= 0x1fff;
+        let needsWrite = true;
+        if (parsedFlags in flagNeedsWrite) {
+            needsWrite = flagNeedsWrite[parsedFlags];
+        }
+        if (needsWrite) {
+            this.fs.API.put(path, stream.file);
+        }
+        stream.file = undefined;
+    }
+    read(stream, buffer, offset, length, position) {
+        if (length <= 0 ||
+            stream.file === undefined ||
+            position >= (stream.file.data.length || 0)) {
+            return 0;
+        }
+        const size = Math.min(stream.file.data.length - position, length);
+        buffer.set(stream.file.data.subarray(position, position + size), offset);
+        return size;
+    }
+    write(stream, buffer, offset, length, position) {
+        var _a;
+        if (length <= 0 || stream.file === undefined) {
+            return 0;
+        }
+        const now = Date.now();
+        stream.node.timestamp = now;
+        stream.node.atime = now;
+        stream.node.mtime = now;
+        stream.node.ctime = now;
+        if (position + length > (((_a = stream.file) === null || _a === void 0 ? void 0 : _a.data.length) || 0)) {
+            const oldData = stream.file.data ? stream.file.data : new Uint8Array();
+            stream.file.data = new Uint8Array(position + length);
+            stream.file.data.set(oldData);
+        }
+        stream.file.data.set(buffer.subarray(offset, offset + length), position);
+        return length;
+    }
+    llseek(stream, offset, whence) {
+        var _a;
+        let position = offset;
+        if (whence === SEEK_CUR) {
+            position += (_a = stream.position) !== null && _a !== void 0 ? _a : stream.shared.position;
+        }
+        else if (whence === SEEK_END) {
+            if (this.fs.FS.isFile(stream.node.mode)) {
+                if (stream.file !== undefined) {
+                    position += stream.file.data.length;
+                }
+                else {
+                    throw new this.fs.FS.ErrnoError(this.fs.ERRNO_CODES.EPERM);
+                }
+            }
+        }
+        if (position < 0) {
+            throw new this.fs.FS.ErrnoError(this.fs.ERRNO_CODES.EINVAL);
+        }
+        return position;
+    }
+}
+export class DriveFSEmscriptenNodeOps {
+    constructor(fs) {
+        this.node = (nodeOrStream) => {
+            if (instanceOfStream(nodeOrStream)) {
+                return nodeOrStream.node;
+            }
+            return nodeOrStream;
+        };
+        this.getattr = (value) => {
+            const node = this.node(value);
+            return {
+                ...this.fs.API.getattr(this.fs.realPath(node)),
+                mode: node.mode,
+                ino: node.id,
+            };
+        };
+        this.setattr = (value, attr) => {
+            const node = this.node(value);
+            for (const [key, value] of Object.entries(attr)) {
+                switch (key) {
+                    case 'mode':
+                        node.mode = value;
+                        break;
+                    case 'timestamp':
+                        node.timestamp = value;
+                        break;
+                    case 'atime':
+                        node.atime = value;
+                        break;
+                    case 'mtime':
+                        node.mtime = value;
+                        break;
+                    case 'ctime':
+                        node.ctime = value;
+                        break;
+                    case 'size': {
+                        const size = value;
+                        const path = this.fs.realPath(node);
+                        if (this.fs.FS.isFile(node.mode) && size >= 0) {
+                            let file;
+                            try {
+                                file = this.fs.API.get(path);
+                            }
+                            catch (e) {
+                                // TODO: Should do anything here? Should we create the file?
+                                break;
+                            }
+                            const oldData = file.data ? file.data : new Uint8Array();
+                            if (size !== oldData.length) {
+                                if (size < oldData.length) {
+                                    file.data = file.data.slice(0, size);
+                                }
+                                else {
+                                    file.data = new Uint8Array(size);
+                                    file.data.set(oldData);
+                                }
+                                this.fs.API.put(path, file);
+                            }
+                        }
+                        else {
+                            console.warn('setattr size of', size, 'on', node, 'not yet implemented');
+                        }
+                        break;
+                    }
+                    case 'dontFollow':
+                        // Ignore for now
+                        break;
+                    default:
+                        console.warn('setattr', key, 'of', value, 'on', node, 'not yet implemented');
+                        break;
+                }
+            }
+        };
+        this.lookup = (parent, name) => {
+            const node = this.node(parent);
+            const path = this.fs.PATH.join2(this.fs.realPath(node), name);
+            const result = this.fs.API.lookup(path);
+            if (!result.ok) {
+                throw new this.fs.FS.ErrnoError(this.fs.ERRNO_CODES['ENOENT']);
+            }
+            return this.fs.createNode(node, name, result.mode, 0);
+        };
+        this.mknod = (parent, name, mode, dev) => {
+            const node = this.node(parent);
+            const path = this.fs.PATH.join2(this.fs.realPath(node), name);
+            this.fs.API.mknod(path, mode);
+            return this.fs.createNode(node, name, mode, dev);
+        };
+        this.rename = (value, newDir, newName) => {
+            const oldNode = this.node(value);
+            const newDirNode = this.node(newDir);
+            this.fs.API.rename(oldNode.parent
+                ? this.fs.PATH.join2(this.fs.realPath(oldNode.parent), oldNode.name)
+                : oldNode.name, this.fs.PATH.join2(this.fs.realPath(newDirNode), newName));
+            // Updating the in-memory node
+            oldNode.name = newName;
+            oldNode.parent = newDirNode;
+        };
+        this.unlink = (parent, name) => {
+            return this.fs.API.rmdir(this.fs.PATH.join2(this.fs.realPath(this.node(parent)), name));
+        };
+        this.rmdir = (parent, name) => {
+            return this.fs.API.rmdir(this.fs.PATH.join2(this.fs.realPath(this.node(parent)), name));
+        };
+        this.readdir = (value) => {
+            return this.fs.API.readdir(this.fs.realPath(this.node(value)));
+        };
+        this.symlink = (parent, newName, oldPath) => {
+            throw new this.fs.FS.ErrnoError(this.fs.ERRNO_CODES['EPERM']);
+        };
+        this.readlink = (node) => {
+            throw new this.fs.FS.ErrnoError(this.fs.ERRNO_CODES['EINVAL']);
+        };
+        this.fs = fs;
+    }
+}
+/**
+ * ContentsAPI base class
+ */
+export class ContentsAPI {
+    constructor(options) {
+        this._driveName = options.driveName;
+        this._mountpoint = options.mountpoint;
+        this.FS = options.FS;
+        this.ERRNO_CODES = options.ERRNO_CODES;
+    }
+    lookup(path) {
+        return this.request({ method: 'lookup', path: this.normalizePath(path) });
+    }
+    getmode(path) {
+        return this.request({ method: 'getmode', path: this.normalizePath(path) });
+    }
+    mknod(path, mode) {
+        return this.request({
+            method: 'mknod',
+            path: this.normalizePath(path),
+            data: { mode },
+        });
+    }
+    rename(oldPath, newPath) {
+        return this.request({
+            method: 'rename',
+            path: this.normalizePath(oldPath),
+            data: { newPath: this.normalizePath(newPath) },
+        });
+    }
+    readdir(path) {
+        const dirlist = this.request({
+            method: 'readdir',
+            path: this.normalizePath(path),
+        });
+        dirlist.push('.');
+        dirlist.push('..');
+        return dirlist;
+    }
+    rmdir(path) {
+        return this.request({ method: 'rmdir', path: this.normalizePath(path) });
+    }
+    get(path) {
+        const response = this.request({
+            method: 'get',
+            path: this.normalizePath(path),
+        });
+        if (!response) {
+            throw new this.FS.ErrnoError(this.ERRNO_CODES['ENOENT']);
+        }
+        const serializedContent = response.content;
+        const format = response.format;
+        switch (format) {
+            case 'json':
+            case 'text':
+                return {
+                    data: encoder.encode(serializedContent),
+                    format,
+                };
+            case 'base64': {
+                const binString = atob(serializedContent);
+                const len = binString.length;
+                const data = new Uint8Array(len);
+                for (let i = 0; i < len; i++) {
+                    data[i] = binString.charCodeAt(i);
+                }
+                return {
+                    data,
+                    format,
+                };
+            }
+            default:
+                throw new this.FS.ErrnoError(this.ERRNO_CODES['ENOENT']);
+        }
+    }
+    put(path, value) {
+        switch (value.format) {
+            case 'json':
+            case 'text':
+                return this.request({
+                    method: 'put',
+                    path: this.normalizePath(path),
+                    data: {
+                        format: value.format,
+                        data: decoder.decode(value.data),
+                    },
+                });
+            case 'base64': {
+                let binary = '';
+                for (let i = 0; i < value.data.byteLength; i++) {
+                    binary += String.fromCharCode(value.data[i]);
+                }
+                return this.request({
+                    method: 'put',
+                    path: this.normalizePath(path),
+                    data: {
+                        format: value.format,
+                        data: btoa(binary),
+                    },
+                });
+            }
+        }
+    }
+    getattr(path) {
+        const stats = this.request({
+            method: 'getattr',
+            path: this.normalizePath(path),
+        });
+        // Emscripten 4.0.9+ (used by Pyodide 0.28+) requires all three timestamps
+        // to be valid Date objects with .getTime() method (see https://github.com/emscripten-core/emscripten/pull/22998).
+        // Fallback to epoch if any timestamp is missing/null/undefined.
+        const defaultDate = new Date(0);
+        stats.atime = stats.atime ? new Date(stats.atime) : defaultDate;
+        stats.mtime = stats.mtime ? new Date(stats.mtime) : defaultDate;
+        stats.ctime = stats.ctime ? new Date(stats.ctime) : defaultDate;
+        // ensure a non-undefined size (0 isn't great, though)
+        stats.size = stats.size || 0;
+        return stats;
+    }
+    /**
+     * Normalize a Path by making it compliant for the content manager
+     *
+     * @param path: the path relatively to the Emscripten drive
+     */
+    normalizePath(path) {
+        // Remove mountpoint prefix
+        if (path.startsWith(this._mountpoint)) {
+            path = path.slice(this._mountpoint.length);
+        }
+        // Add JupyterLab drive name
+        if (this._driveName) {
+            path = `${this._driveName}${DRIVE_SEPARATOR}${path}`;
+        }
+        return path;
+    }
+}
+/**
+ * An Emscripten-compatible synchronous Contents API using the service worker.
+ */
+export class ServiceWorkerContentsAPI extends ContentsAPI {
+    /**
+     * Construct a new ServiceWorkerContentsAPI.
+     */
+    constructor(options) {
+        super(options);
+        this._baseUrl = options.baseUrl;
+        this._browsingContextId = options.browsingContextId || '';
+    }
+    request(data) {
+        const xhr = new XMLHttpRequest();
+        xhr.open('POST', encodeURI(this.endpoint), false);
+        // Generate unique request ID for correlation
+        const requestId = UUID.uuid4();
+        // Add the origin browsing context ID and request ID to the request
+        const requestWithMetadata = {
+            data: { ...data, requestId },
+            browsingContextId: this._browsingContextId,
+            requestId,
+        };
+        try {
+            xhr.send(JSON.stringify(requestWithMetadata));
+        }
+        catch (e) {
+            console.error(e);
+        }
+        if (xhr.status >= 400) {
+            throw new this.FS.ErrnoError(this.ERRNO_CODES['EINVAL']);
+        }
+        return JSON.parse(xhr.responseText);
+    }
+    /**
+     * Get the api/drive endpoint
+     */
+    get endpoint() {
+        return `${this._baseUrl}api/drive`;
+    }
+}
+export class DriveFS {
+    constructor(options) {
+        this.FS = options.FS;
+        this.PATH = options.PATH;
+        this.ERRNO_CODES = options.ERRNO_CODES;
+        this.API = this.createAPI(options);
+        this.driveName = options.driveName;
+        this.node_ops = new DriveFSEmscriptenNodeOps(this);
+        this.stream_ops = new DriveFSEmscriptenStreamOps(this);
+    }
+    /**
+     * Create the ContentsAPI.
+     *
+     * This is supposed to be overwritten if needed.
+     */
+    createAPI(options) {
+        if (!options.browsingContextId || !options.baseUrl) {
+            throw new Error('Cannot create service-worker API without current browsingContextId');
+        }
+        return new ServiceWorkerContentsAPI(options);
+    }
+    mount(mount) {
+        return this.createNode(null, mount.mountpoint, DIR_MODE | 511, 0);
+    }
+    createNode(parent, name, mode, dev) {
+        const FS = this.FS;
+        if (!FS.isDir(mode) && !FS.isFile(mode)) {
+            throw new FS.ErrnoError(this.ERRNO_CODES['EINVAL']);
+        }
+        const node = FS.createNode(parent, name, mode, dev);
+        node.node_ops = this.node_ops;
+        node.stream_ops = this.stream_ops;
+        return node;
+    }
+    getMode(path) {
+        return this.API.getmode(path);
+    }
+    realPath(node) {
+        const parts = [];
+        let currentNode = node;
+        parts.push(currentNode.name);
+        while (currentNode.parent !== currentNode) {
+            currentNode = currentNode.parent;
+            parts.push(currentNode.name);
+        }
+        parts.reverse();
+        return this.PATH.join.apply(null, parts);
+    }
+}
+//# sourceMappingURL=drivefs.js.map

package/lib/contents/drivefs.js.map

@@ -0,0 +1 @@
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package/lib/contents/emscripten.d.ts

@@ -0,0 +1,96 @@
+/**
+ * Types for Emscripten primitives.
+ *
+ * Ideally, much more of these would be taken from `@types/emscripten`.
+ */
+type EmscriptenFS = typeof FS;
+export declare const DIR_MODE = 16895;
+export declare const FILE_MODE = 33206;
+export declare const SEEK_CUR = 1;
+export declare const SEEK_END = 2;
+export interface IStats {
+    dev: number;
+    ino?: number;
+    mode?: number;
+    nlink: number;
+    uid: number;
+    gid: number;
+    rdev: number;
+    size: number;
+    blksize: number;
+    blocks: number;
+    atime: Date | string;
+    mtime: Date | string;
+    ctime: Date | string;
+    timestamp?: number;
+}
+export interface IEmscriptenFSNode {
+    id: number;
+    name: string;
+    mode: number;
+    parent: IEmscriptenFSNode;
+    mount: {
+        opts: {
+            root: string;
+        };
+    };
+    stream_ops: IEmscriptenStreamOps;
+    node_ops: IEmscriptenNodeOps;
+    timestamp: number;
+    atime: number;
+    mtime: number;
+    ctime: number;
+}
+export interface IEmscriptenStream {
+    node: IEmscriptenFSNode;
+    nfd: any;
+    flags?: number;
+    position?: number;
+    shared: {
+        flags: number;
+        position: number;
+    };
+}
+export declare function instanceOfStream(nodeOrStream: IEmscriptenFSNode | IEmscriptenStream): nodeOrStream is IEmscriptenStream;
+export interface IEmscriptenNodeOps {
+    getattr(node: IEmscriptenFSNode | IEmscriptenStream): IStats;
+    setattr(node: IEmscriptenFSNode | IEmscriptenStream, attr: IStats): void;
+    lookup(parent: IEmscriptenFSNode | IEmscriptenStream, name: string): IEmscriptenFSNode;
+    mknod(parent: IEmscriptenFSNode | IEmscriptenStream, name: string, mode: number, dev: number): IEmscriptenFSNode;
+    rename(oldNode: IEmscriptenFSNode | IEmscriptenStream, newDir: IEmscriptenFSNode | IEmscriptenStream, newName: string): void;
+    unlink(parent: IEmscriptenFSNode | IEmscriptenStream, name: string): void;
+    rmdir(parent: IEmscriptenFSNode | IEmscriptenStream, name: string): void;
+    readdir(node: IEmscriptenFSNode | IEmscriptenStream): string[];
+    symlink(parent: IEmscriptenFSNode | IEmscriptenStream, newName: string, oldPath: string): void;
+    readlink(node: IEmscriptenFSNode | IEmscriptenStream): string;
+}
+export interface IEmscriptenStreamOps {
+    open(stream: IEmscriptenStream): void;
+    close(stream: IEmscriptenStream): void;
+    read(stream: IEmscriptenStream, buffer: Uint8Array, offset: number, length: number, position: number): number;
+    write(stream: IEmscriptenStream, buffer: Uint8Array, offset: number, length: number, position: number): number;
+    llseek(stream: IEmscriptenStream, offset: number, whence: number): number;
+}
+/**
+ * The emscripten filesystem module API.
+ */
+export type FS = EmscriptenFS & {
+    ErrnoError: any;
+    createNode: (parent: IEmscriptenFSNode | null, name: string, mode: number, dev: number) => IEmscriptenFSNode;
+};
+/**
+ * The emscripten filesystem error codes.
+ */
+export type ERRNO_CODES = any;
+/**
+ * The emscripten FS Path API.
+ */
+export type PATH = {
+    basename: (path: string) => string;
+    dirname: (path: string) => string;
+    join: (...parts: string[]) => string;
+    join2: (l: string, r: string) => string;
+    normalize: (path: string) => string;
+    splitPath: (filename: string) => string;
+};
+export {};

package/lib/contents/emscripten.js

@@ -0,0 +1,10 @@
+// Copyright (c) Jupyter Development Team.
+// Distributed under the terms of the Modified BSD License.
+export const DIR_MODE = 16895; // 040777
+export const FILE_MODE = 33206; // 100666
+export const SEEK_CUR = 1;
+export const SEEK_END = 2;
+export function instanceOfStream(nodeOrStream) {
+    return 'node' in nodeOrStream;
+}
+//# sourceMappingURL=emscripten.js.map

package/lib/contents/emscripten.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"emscripten.js","sourceRoot":"","sources":["../../src/contents/emscripten.ts"],"names":[],"mappings":"AAAA,0CAA0C;AAC1C,2DAA2D;AAgB3D,MAAM,CAAC,MAAM,QAAQ,GAAG,KAAK,CAAC,CAAC,SAAS;AACxC,MAAM,CAAC,MAAM,SAAS,GAAG,KAAK,CAAC,CAAC,SAAS;AACzC,MAAM,CAAC,MAAM,QAAQ,GAAG,CAAC,CAAC;AAC1B,MAAM,CAAC,MAAM,QAAQ,GAAG,CAAC,CAAC;AA4C1B,MAAM,UAAU,gBAAgB,CAC9B,YAAmD;IAEnD,OAAO,MAAM,IAAI,YAAY,CAAC;AAChC,CAAC"}

package/lib/contents/index.d.ts

@@ -0,0 +1,5 @@
+export * from './drive';
+export * from './drivefs';
+export * from './tokens';
+export * from './emscripten';
+export * from './drivecontents';

package/lib/contents/index.js

@@ -0,0 +1,8 @@
+// Copyright (c) Jupyter Development Team.
+// Distributed under the terms of the Modified BSD License.
+export * from './drive';
+export * from './drivefs';
+export * from './tokens';
+export * from './emscripten';
+export * from './drivecontents';
+//# sourceMappingURL=index.js.map

package/lib/contents/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/contents/index.ts"],"names":[],"mappings":"AAAA,0CAA0C;AAC1C,2DAA2D;AAE3D,cAAc,SAAS,CAAC;AACxB,cAAc,WAAW,CAAC;AAC1B,cAAc,UAAU,CAAC;AACzB,cAAc,cAAc,CAAC;AAC7B,cAAc,iBAAiB,CAAC"}

package/lib/contents/tokens.d.ts

@@ -0,0 +1,21 @@
+/**
+ * Commonly-used mimetypes
+ */
+export declare namespace MIME {
+    const JSON = "application/json";
+    const PLAIN_TEXT = "text/plain";
+    const OCTET_STREAM = "octet/stream";
+}
+/**
+ * A namespace for file constructs.
+ */
+export declare namespace FILE {
+    /**
+     * Get a mimetype (or fallback).
+     */
+    function getType(ext: string, defaultType?: string | null): string;
+    /**
+     * Determine whether the given extension matches a given fileFormat.
+     */
+    function hasFormat(ext: string, fileFormat: 'base64' | 'text' | 'json'): boolean;
+}