@jupyterlab/csvviewer 4.7.0-alpha.0 → 4.7.0-alpha.1

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Files changed (8) hide show
  1. package/lib/model.js +27 -18
  2. package/lib/model.js.map +1 -1
  3. package/lib/parse.d.ts +4 -0
  4. package/lib/parse.js +28 -36
  5. package/lib/parse.js.map +1 -1
  6. package/package.json +12 -12
  7. package/src/model.ts +32 -18
  8. package/src/parse.ts +33 -36
package/lib/model.js CHANGED
@@ -387,30 +387,18 @@ export class DSVModel extends DataModel {
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  * parsed again.
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  */
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  _computeRowOffsets(endRow = 4294967295) {
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- var _a;
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+ var _a, _b;
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  // If we've already parsed up to endRow, or if we've already parsed the
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  // entire data set, return early.
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  if (this._rowCount >= endRow || this._doneParsing === true) {
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  return;
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  }
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- // Compute the column count if we don't already have it.
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- if (this._columnCount === undefined) {
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- // Get number of columns in first row
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- this._columnCount = PARSERS[this._parser]({
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- data: this._rawData,
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- delimiter: this._delimiter,
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- rowDelimiter: this._rowDelimiter,
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- quote: this._quote,
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- columnOffsets: true,
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- maxRows: 1
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- }).ncols;
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- }
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  // `reparse` is the number of rows we are requesting to parse over again.
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  // We generally start at the beginning of the last row offset, so that the
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  // first row offset returned is the same as the last row offset we already
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  // have. We parse the data up to and including the requested row.
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  const reparse = this._rowCount > 0 ? 1 : 0;
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- const { nrows, offsets } = PARSERS[this._parser]({
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+ const { nrows, offsets, maxNcols } = PARSERS[this._parser]({
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  data: this._rawData,
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  startIndex: (_a = this._rowOffsets[this._rowCount - reparse]) !== null && _a !== void 0 ? _a : 0,
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  delimiter: this._delimiter,
@@ -432,6 +420,9 @@ export class DSVModel extends DataModel {
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  const oldRowCount = this._rowCount;
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  const duplicateRows = Math.min(nrows, reparse);
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  this._rowCount = oldRowCount + nrows - duplicateRows;
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+ const oldColumnCount = (_b = this._columnCount) !== null && _b !== void 0 ? _b : 0;
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+ this._columnCount = Math.max(oldColumnCount, maxNcols !== null && maxNcols !== void 0 ? maxNcols : 0);
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+ const columnCountChanged = this._columnCount !== oldColumnCount;
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  // If we didn't reach the requested row, we must be done.
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  if (this._rowCount < endRow) {
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  this._doneParsing = true;
@@ -449,10 +440,28 @@ export class DSVModel extends DataModel {
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  // enough for all column offsets. We allocate up to 128 megabytes:
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  // 128*(2**20 bytes/M)/(4 bytes/entry) = 33554432 entries.
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  const maxColumnOffsetsRows = Math.floor(33554432 / this._columnCount);
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- // We need to expand the column offset array if we were storing all column
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- // offsets before. Check to see if the previous size was small enough that
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- // we stored all column offsets.
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- if (oldRowCount <= maxColumnOffsetsRows) {
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+ if (columnCountChanged) {
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+ const columnOffsetRows = this._rowCount <= maxColumnOffsetsRows
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+ ? this._rowCount
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+ : Math.min(this._maxCacheGet, maxColumnOffsetsRows);
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+ this._columnOffsets = new Uint32Array(columnOffsetRows * this._columnCount);
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+ this._columnOffsets.fill(0xffffffff);
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+ this._columnOffsetsStartingRow = 0;
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+ if (this._header.length > 0) {
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+ for (let c = this._header.length; c < this._columnCount; c++) {
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+ this._header.push(this._getField(0, c));
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+ }
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+ }
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+ if (oldColumnCount > 0) {
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+ this.emitChanged({
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+ type: 'columns-inserted',
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+ region: 'body',
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+ index: oldColumnCount,
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+ span: this._columnCount - oldColumnCount
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+ });
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+ }
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+ }
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+ else if (oldRowCount <= maxColumnOffsetsRows) {
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  // Check to see if the new column offsets array is small enough to still
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  // store, or if we should cut over to a small cache.
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  if (this._rowCount <= maxColumnOffsetsRows) {
package/lib/model.js.map CHANGED
@@ -1 +1 @@
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package/lib/parse.d.ts CHANGED
@@ -78,6 +78,10 @@ export declare namespace IParser {
78
78
  * The number of columns parsed, or 0 if only row offsets are returned.
79
79
  */
80
80
  ncols: number;
81
+ /**
82
+ * The maximum number of columns observed while parsing.
83
+ */
84
+ maxNcols?: number;
81
85
  /**
82
86
  * The index offsets into the data string for the rows or data items.
83
87
  *
package/lib/parse.js CHANGED
@@ -35,6 +35,7 @@ export function parseDSV(options) {
35
35
  let ncols = options.ncols;
36
36
  // The number of rows we've already parsed.
37
37
  let nrows = 0;
38
+ let maxNcols = 0;
38
39
  // The row or column offsets we return.
39
40
  const offsets = [];
40
41
  // Set up some useful local variables.
@@ -231,6 +232,7 @@ export function parseDSV(options) {
231
232
  switch (state) {
232
233
  case NEW_ROW:
233
234
  nrows++;
235
+ maxNcols = Math.max(maxNcols, col);
234
236
  // If ncols is undefined, set it to the number of columns in this row (first row implied).
235
237
  if (ncols === undefined) {
236
238
  if (nrows !== 1) {
@@ -255,7 +257,7 @@ export function parseDSV(options) {
255
257
  }
256
258
  // Shortcut return if nrows reaches the maximum rows we are to parse.
257
259
  if (nrows === maxRows) {
258
- return { nrows, ncols: columnOffsets ? ncols : 0, offsets };
260
+ return { nrows, ncols: columnOffsets ? ncols : 0, maxNcols, offsets };
259
261
  }
260
262
  break;
261
263
  case NEW_FIELD:
@@ -275,6 +277,7 @@ export function parseDSV(options) {
275
277
  // defined.
276
278
  if (state !== NEW_ROW) {
277
279
  nrows++;
280
+ maxNcols = Math.max(maxNcols, col);
278
281
  if (columnOffsets === true) {
279
282
  // If ncols is *still* undefined, then we only parsed one row and didn't
280
283
  // have a newline, so set it to the number of columns we found.
@@ -294,7 +297,7 @@ export function parseDSV(options) {
294
297
  }
295
298
  }
296
299
  }
297
- return { nrows, ncols: columnOffsets ? (ncols !== null && ncols !== void 0 ? ncols : 0) : 0, offsets };
300
+ return { nrows, ncols: columnOffsets ? (ncols !== null && ncols !== void 0 ? ncols : 0) : 0, maxNcols, offsets };
298
301
  }
299
302
  /**
300
303
  * Parse delimiter-separated data where no delimiter is quoted.
@@ -316,13 +319,13 @@ export function parseDSVNoQuotes(options) {
316
319
  // Set up our return variables.
317
320
  const offsets = [];
318
321
  let nrows = 0;
322
+ let maxNcols = 0;
319
323
  // Set up various state variables.
320
324
  const rowDelimiterLength = rowDelimiter.length;
321
325
  let currRow = startIndex;
322
326
  const len = data.length;
323
327
  let nextRow;
324
328
  let col;
325
- let rowString;
326
329
  let colIndex;
327
330
  // The end of the current row.
328
331
  let rowEnd;
@@ -338,44 +341,33 @@ export function parseDSVNoQuotes(options) {
338
341
  // If the next row delimiter is not found, set the end of the row to the
339
342
  // end of the data string.
340
343
  rowEnd = nextRow === -1 ? len : nextRow;
341
- // If we are returning column offsets, push them onto the array.
342
- if (columnOffsets === true) {
343
- // Find the next field delimiter. We slice the current row out so that
344
- // the indexOf will stop at the end of the row. It may possibly be faster
345
- // to just use a loop to check each character.
346
- col = 1;
347
- rowString = data.slice(currRow, rowEnd);
348
- colIndex = rowString.indexOf(delimiter);
349
- if (ncols === undefined) {
350
- // If we don't know how many columns we need, loop through and find all
351
- // of the field delimiters in this row.
352
- while (colIndex !== -1) {
353
- offsets.push(currRow + colIndex + 1);
354
- col++;
355
- colIndex = rowString.indexOf(delimiter, colIndex + 1);
356
- }
357
- // Set ncols to the number of fields we found.
358
- ncols = col;
344
+ // Find field delimiters in the current row.
345
+ col = 1;
346
+ for (colIndex = currRow; colIndex < rowEnd; colIndex++) {
347
+ if (data[colIndex] !== delimiter) {
348
+ continue;
359
349
  }
360
- else {
361
- // If we know the number of columns we expect, find the field delimiters
362
- // up to that many columns.
363
- while (colIndex !== -1 && col < ncols) {
364
- offsets.push(currRow + colIndex + 1);
365
- col++;
366
- colIndex = rowString.indexOf(delimiter, colIndex + 1);
367
- }
368
- // If we didn't reach the number of columns we expected, pad the offsets
369
- // with the offset just before the row delimiter.
370
- while (col < ncols) {
371
- offsets.push(rowEnd);
372
- col++;
373
- }
350
+ if (columnOffsets === true && (ncols === undefined || col < ncols)) {
351
+ offsets.push(colIndex + 1);
352
+ }
353
+ col++;
354
+ }
355
+ maxNcols = Math.max(maxNcols, col);
356
+ if (ncols === undefined) {
357
+ // Set ncols to the number of fields we found.
358
+ ncols = col;
359
+ }
360
+ else if (columnOffsets === true) {
361
+ // If we didn't reach the number of columns we expected, pad the offsets
362
+ // with the offset just before the row delimiter.
363
+ while (col < ncols) {
364
+ offsets.push(rowEnd);
365
+ col++;
374
366
  }
375
367
  }
376
368
  // Skip past the row delimiter at the end of the row.
377
369
  currRow = rowEnd + rowDelimiterLength;
378
370
  }
379
- return { nrows, ncols: columnOffsets ? (ncols !== null && ncols !== void 0 ? ncols : 0) : 0, offsets };
371
+ return { nrows, ncols: columnOffsets ? (ncols !== null && ncols !== void 0 ? ncols : 0) : 0, maxNcols, offsets };
380
372
  }
381
373
  //# sourceMappingURL=parse.js.map
package/lib/parse.js.map CHANGED
@@ -1 +1 @@
1
- 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1
+ 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package/package.json CHANGED
@@ -1,6 +1,6 @@
1
1
  {
2
2
  "name": "@jupyterlab/csvviewer",
3
- "version": "4.7.0-alpha.0",
3
+ "version": "4.7.0-alpha.1",
4
4
  "description": "JupyterLab - CSV Widget",
5
5
  "homepage": "https://github.com/jupyterlab/jupyterlab",
6
6
  "bugs": {
@@ -41,19 +41,19 @@
41
41
  "watch": "tsc -b --watch"
42
42
  },
43
43
  "dependencies": {
44
- "@jupyterlab/coreutils": "^6.7.0-alpha.0",
45
- "@jupyterlab/docregistry": "^4.7.0-alpha.0",
46
- "@jupyterlab/translation": "^4.7.0-alpha.0",
47
- "@jupyterlab/ui-components": "^4.7.0-alpha.0",
48
- "@lumino/coreutils": "^2.2.2",
49
- "@lumino/datagrid": "^2.5.7",
50
- "@lumino/disposable": "^2.1.5",
51
- "@lumino/messaging": "^2.0.4",
52
- "@lumino/signaling": "^2.1.5",
53
- "@lumino/widgets": "^2.8.0"
44
+ "@jupyterlab/coreutils": "^6.7.0-alpha.1",
45
+ "@jupyterlab/docregistry": "^4.7.0-alpha.1",
46
+ "@jupyterlab/translation": "^4.7.0-alpha.1",
47
+ "@jupyterlab/ui-components": "^4.7.0-alpha.1",
48
+ "@lumino/coreutils": "^2.2.3",
49
+ "@lumino/datagrid": "^2.5.8",
50
+ "@lumino/disposable": "^2.1.6",
51
+ "@lumino/messaging": "^2.0.5",
52
+ "@lumino/signaling": "^2.1.6",
53
+ "@lumino/widgets": "^2.9.0"
54
54
  },
55
55
  "devDependencies": {
56
- "@jupyterlab/testing": "^4.7.0-alpha.0",
56
+ "@jupyterlab/testing": "^4.7.0-alpha.1",
57
57
  "@types/jest": "^29.2.0",
58
58
  "csv-spectrum": "^1.0.0",
59
59
  "jest": "^29.2.0",
package/src/model.ts CHANGED
@@ -408,25 +408,12 @@ export class DSVModel extends DataModel implements IDisposable {
408
408
  return;
409
409
  }
410
410
 
411
- // Compute the column count if we don't already have it.
412
- if (this._columnCount === undefined) {
413
- // Get number of columns in first row
414
- this._columnCount = PARSERS[this._parser]({
415
- data: this._rawData,
416
- delimiter: this._delimiter,
417
- rowDelimiter: this._rowDelimiter,
418
- quote: this._quote,
419
- columnOffsets: true,
420
- maxRows: 1
421
- }).ncols;
422
- }
423
-
424
411
  // `reparse` is the number of rows we are requesting to parse over again.
425
412
  // We generally start at the beginning of the last row offset, so that the
426
413
  // first row offset returned is the same as the last row offset we already
427
414
  // have. We parse the data up to and including the requested row.
428
415
  const reparse = this._rowCount! > 0 ? 1 : 0;
429
- const { nrows, offsets } = PARSERS[this._parser]({
416
+ const { nrows, offsets, maxNcols } = PARSERS[this._parser]({
430
417
  data: this._rawData,
431
418
  startIndex: this._rowOffsets[this._rowCount! - reparse] ?? 0,
432
419
  delimiter: this._delimiter,
@@ -452,6 +439,10 @@ export class DSVModel extends DataModel implements IDisposable {
452
439
  const duplicateRows = Math.min(nrows, reparse);
453
440
  this._rowCount = oldRowCount + nrows - duplicateRows;
454
441
 
442
+ const oldColumnCount = this._columnCount ?? 0;
443
+ this._columnCount = Math.max(oldColumnCount, maxNcols ?? 0);
444
+ const columnCountChanged = this._columnCount !== oldColumnCount;
445
+
455
446
  // If we didn't reach the requested row, we must be done.
456
447
  if (this._rowCount < endRow) {
457
448
  this._doneParsing = true;
@@ -473,10 +464,33 @@ export class DSVModel extends DataModel implements IDisposable {
473
464
  // 128*(2**20 bytes/M)/(4 bytes/entry) = 33554432 entries.
474
465
  const maxColumnOffsetsRows = Math.floor(33554432 / this._columnCount);
475
466
 
476
- // We need to expand the column offset array if we were storing all column
477
- // offsets before. Check to see if the previous size was small enough that
478
- // we stored all column offsets.
479
- if (oldRowCount <= maxColumnOffsetsRows) {
467
+ if (columnCountChanged) {
468
+ const columnOffsetRows =
469
+ this._rowCount <= maxColumnOffsetsRows
470
+ ? this._rowCount
471
+ : Math.min(this._maxCacheGet, maxColumnOffsetsRows);
472
+
473
+ this._columnOffsets = new Uint32Array(
474
+ columnOffsetRows * this._columnCount
475
+ );
476
+ this._columnOffsets.fill(0xffffffff);
477
+ this._columnOffsetsStartingRow = 0;
478
+
479
+ if (this._header.length > 0) {
480
+ for (let c = this._header.length; c < this._columnCount; c++) {
481
+ this._header.push(this._getField(0, c));
482
+ }
483
+ }
484
+
485
+ if (oldColumnCount > 0) {
486
+ this.emitChanged({
487
+ type: 'columns-inserted',
488
+ region: 'body',
489
+ index: oldColumnCount,
490
+ span: this._columnCount - oldColumnCount
491
+ });
492
+ }
493
+ } else if (oldRowCount <= maxColumnOffsetsRows) {
480
494
  // Check to see if the new column offsets array is small enough to still
481
495
  // store, or if we should cut over to a small cache.
482
496
  if (this._rowCount <= maxColumnOffsetsRows) {
package/src/parse.ts CHANGED
@@ -108,6 +108,10 @@ export namespace IParser {
108
108
  */
109
109
  ncols: number;
110
110
 
111
+ /**
112
+ * The maximum number of columns observed while parsing.
113
+ */
114
+ maxNcols?: number;
111
115
  /**
112
116
  * The index offsets into the data string for the rows or data items.
113
117
  *
@@ -169,6 +173,7 @@ export function parseDSV(options: IParser.IOptions): IParser.IResults {
169
173
 
170
174
  // The number of rows we've already parsed.
171
175
  let nrows = 0;
176
+ let maxNcols = 0;
172
177
 
173
178
  // The row or column offsets we return.
174
179
  const offsets = [];
@@ -401,6 +406,7 @@ export function parseDSV(options: IParser.IOptions): IParser.IResults {
401
406
  switch (state) {
402
407
  case NEW_ROW:
403
408
  nrows++;
409
+ maxNcols = Math.max(maxNcols, col);
404
410
 
405
411
  // If ncols is undefined, set it to the number of columns in this row (first row implied).
406
412
  if (ncols === undefined) {
@@ -427,7 +433,7 @@ export function parseDSV(options: IParser.IOptions): IParser.IResults {
427
433
 
428
434
  // Shortcut return if nrows reaches the maximum rows we are to parse.
429
435
  if (nrows === maxRows) {
430
- return { nrows, ncols: columnOffsets ? ncols : 0, offsets };
436
+ return { nrows, ncols: columnOffsets ? ncols : 0, maxNcols, offsets };
431
437
  }
432
438
  break;
433
439
 
@@ -451,6 +457,7 @@ export function parseDSV(options: IParser.IOptions): IParser.IResults {
451
457
  // defined.
452
458
  if (state !== NEW_ROW) {
453
459
  nrows++;
460
+ maxNcols = Math.max(maxNcols, col);
454
461
  if (columnOffsets === true) {
455
462
  // If ncols is *still* undefined, then we only parsed one row and didn't
456
463
  // have a newline, so set it to the number of columns we found.
@@ -471,7 +478,7 @@ export function parseDSV(options: IParser.IOptions): IParser.IResults {
471
478
  }
472
479
  }
473
480
 
474
- return { nrows, ncols: columnOffsets ? (ncols ?? 0) : 0, offsets };
481
+ return { nrows, ncols: columnOffsets ? (ncols ?? 0) : 0, maxNcols, offsets };
475
482
  }
476
483
 
477
484
  /**
@@ -503,6 +510,7 @@ export function parseDSVNoQuotes(options: IParser.IOptions): IParser.IResults {
503
510
  // Set up our return variables.
504
511
  const offsets: number[] = [];
505
512
  let nrows = 0;
513
+ let maxNcols = 0;
506
514
 
507
515
  // Set up various state variables.
508
516
  const rowDelimiterLength = rowDelimiter.length;
@@ -510,7 +518,6 @@ export function parseDSVNoQuotes(options: IParser.IOptions): IParser.IResults {
510
518
  const len = data.length;
511
519
  let nextRow: number;
512
520
  let col: number;
513
- let rowString: string;
514
521
  let colIndex: number;
515
522
 
516
523
  // The end of the current row.
@@ -532,41 +539,31 @@ export function parseDSVNoQuotes(options: IParser.IOptions): IParser.IResults {
532
539
  // end of the data string.
533
540
  rowEnd = nextRow === -1 ? len : nextRow;
534
541
 
535
- // If we are returning column offsets, push them onto the array.
536
- if (columnOffsets === true) {
537
- // Find the next field delimiter. We slice the current row out so that
538
- // the indexOf will stop at the end of the row. It may possibly be faster
539
- // to just use a loop to check each character.
540
- col = 1;
541
- rowString = data.slice(currRow, rowEnd);
542
- colIndex = rowString.indexOf(delimiter);
542
+ // Find field delimiters in the current row.
543
+ col = 1;
543
544
 
544
- if (ncols === undefined) {
545
- // If we don't know how many columns we need, loop through and find all
546
- // of the field delimiters in this row.
547
- while (colIndex !== -1) {
548
- offsets.push(currRow + colIndex + 1);
549
- col++;
550
- colIndex = rowString.indexOf(delimiter, colIndex + 1);
551
- }
545
+ for (colIndex = currRow; colIndex < rowEnd; colIndex++) {
546
+ if (data[colIndex] !== delimiter) {
547
+ continue;
548
+ }
552
549
 
553
- // Set ncols to the number of fields we found.
554
- ncols = col;
555
- } else {
556
- // If we know the number of columns we expect, find the field delimiters
557
- // up to that many columns.
558
- while (colIndex !== -1 && col < ncols) {
559
- offsets.push(currRow + colIndex + 1);
560
- col++;
561
- colIndex = rowString.indexOf(delimiter, colIndex + 1);
562
- }
550
+ if (columnOffsets === true && (ncols === undefined || col < ncols)) {
551
+ offsets.push(colIndex + 1);
552
+ }
553
+ col++;
554
+ }
563
555
 
564
- // If we didn't reach the number of columns we expected, pad the offsets
565
- // with the offset just before the row delimiter.
566
- while (col < ncols) {
567
- offsets.push(rowEnd);
568
- col++;
569
- }
556
+ maxNcols = Math.max(maxNcols, col);
557
+
558
+ if (ncols === undefined) {
559
+ // Set ncols to the number of fields we found.
560
+ ncols = col;
561
+ } else if (columnOffsets === true) {
562
+ // If we didn't reach the number of columns we expected, pad the offsets
563
+ // with the offset just before the row delimiter.
564
+ while (col < ncols) {
565
+ offsets.push(rowEnd);
566
+ col++;
570
567
  }
571
568
  }
572
569
 
@@ -574,5 +571,5 @@ export function parseDSVNoQuotes(options: IParser.IOptions): IParser.IResults {
574
571
  currRow = rowEnd + rowDelimiterLength;
575
572
  }
576
573
 
577
- return { nrows, ncols: columnOffsets ? (ncols ?? 0) : 0, offsets };
574
+ return { nrows, ncols: columnOffsets ? (ncols ?? 0) : 0, maxNcols, offsets };
578
575
  }