@jcode.labs/ragmir 6.1.6 → 6.2.0

package/dist/preview.js.map

@@ -1 +1 @@
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package/dist/quality-report.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"quality-report.d.ts","sourceRoot":"","sources":["../src/quality-report.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EACV,MAAM,EACN,aAAa,EACb,iBAAiB,EACjB,kBAAkB,EAEnB,MAAM,YAAY,CAAA;AAEnB,wBAAgB,wBAAwB,CAAC,QAAQ,EAAE,aAAa,GAAG,MAAM,CAqBxE;AAED,wBAAgB,sBAAsB,CAAC,KAAK,EAAE,QAAQ,CAAC,iBAAiB,CAAC,GAAG;IAC1E,SAAS,EAAE,MAAM,CAAA;IACjB,UAAU,EAAE,MAAM,CAAA;IAClB,iBAAiB,EAAE,MAAM,CAAA;CAC1B,CAcA;AAED,wBAAsB,eAAe,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,WAAW,GAAG,OAAO,CAAC,MAAM,CAAC,CAE7F;AAED,wBAAgB,wBAAwB,CACtC,MAAM,EAAE,IAAI,CAAC,kBAAkB,EAAE,0BAA0B,CAAC,GAC3D,MAAM,CAGR;AAED,wBAAsB,yBAAyB,CAC7C,MAAM,EAAE,kBAAkB,GAAG,SAAS,EACtC,QAAQ,EAAE,aAAa,GAAG,IAAI,EAC9B,MAAM,EAAE,MAAM,GACb,OAAO,CAAC,OAAO,CAAC,CA4ClB;AAED,wBAAgB,oBAAoB,CAAC,KAAK,EAAE,OAAO,GAAG,KAAK,IAAI,kBAAkB,CAyBhF"}
+{"version":3,"file":"quality-report.d.ts","sourceRoot":"","sources":["../src/quality-report.ts"],"names":[],"mappings":"AAKA,OAAO,KAAK,EACV,MAAM,EACN,aAAa,EACb,iBAAiB,EACjB,kBAAkB,EAEnB,MAAM,YAAY,CAAA;AAEnB,wBAAgB,wBAAwB,CAAC,QAAQ,EAAE,aAAa,GAAG,MAAM,CAqBxE;AAED,wBAAgB,sBAAsB,CAAC,KAAK,EAAE,QAAQ,CAAC,iBAAiB,CAAC,GAAG;IAC1E,SAAS,EAAE,MAAM,CAAA;IACjB,UAAU,EAAE,MAAM,CAAA;IAClB,iBAAiB,EAAE,MAAM,CAAA;CAC1B,CAcA;AAED,wBAAsB,eAAe,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,WAAW,GAAG,OAAO,CAAC,MAAM,CAAC,CAE7F;AAED,wBAAgB,wBAAwB,CACtC,MAAM,EAAE,IAAI,CAAC,kBAAkB,EAAE,0BAA0B,CAAC,GAC3D,MAAM,CAGR;AAED,wBAAsB,yBAAyB,CAC7C,MAAM,EAAE,kBAAkB,GAAG,SAAS,EACtC,QAAQ,EAAE,aAAa,GAAG,IAAI,EAC9B,MAAM,EAAE,MAAM,GACb,OAAO,CAAC,OAAO,CAAC,CA6ClB;AAED,wBAAgB,oBAAoB,CAAC,KAAK,EAAE,OAAO,GAAG,KAAK,IAAI,kBAAkB,CAyBhF"}

package/dist/quality-report.js

@@ -57,7 +57,7 @@ export async function isCompatibleQualityReport(report, manifest, config) {
         report.embeddingModelDigest !== config.embeddingModelDigest ||
         report.retrievalProfile !== config.retrievalProfile ||
         report.rankingPolicyFingerprint !==
-            rankingPolicyFingerprint(rankingPolicyFor(config.embeddingProvider, config.retrievalProfile, config.maxChunksPerDocument))) {
+            rankingPolicyFingerprint(rankingPolicyFor(config.embeddingProvider, config.retrievalProfile, config.maxChunksPerDocument, config.embeddingModel))) {
         return false;
     }
     const goldenPath = path.resolve(config.projectRoot, report.goldenPath);

package/dist/quality-report.js.map

@@ -1 +1 @@
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package/dist/query.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"query.d.ts","sourceRoot":"","sources":["../src/query.ts"],"names":[],"mappings":"AAEA,OAAO,EAEL,KAAK,UAAU,EAMhB,MAAM,kBAAkB,CAAA;AA4BzB,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,YAAY,CAAA;AAGnD,OAAO,KAAK,EACV,MAAM,EAEN,qBAAqB,EACrB,gBAAgB,EAEhB,gBAAgB,EAEhB,aAAa,EACb,YAAY,EAGb,MAAM,YAAY,CAAA;AA+CnB,eAAO,MAAM,qCAAqC,6BAA6B,CAAA;AAoD/E,wBAAsB,MAAM,CAAC,KAAK,EAAE,MAAM,EAAE,OAAO,GAAE,aAAkB,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC,CAIhG;AAED,wBAAsB,gBAAgB,CACpC,KAAK,EAAE,MAAM,EACb,OAAO,EAAE,aAAa,EACtB,MAAM,EAAE,MAAM,EACd,UAAU,CAAC,EAAE,UAAU,EACvB,YAAY,CAAC,EAAE,WAAW,EAC1B,gBAAgB,CAAC,EAAE,iBAAiB,EACpC,mBAAmB,UAAQ,GAC1B,OAAO,CAAC,YAAY,EAAE,CAAC,CAkBzB;AA+JD,wBAAgB,oBAAoB,CAClC,eAAe,EAAE,MAAM,EACvB,OAAO,GAAE,gBAA6B,GACrC,MAAM,CAER;AAED,wBAAgB,qBAAqB,CACnC,eAAe,EAAE,MAAM,EACvB,OAAO,GAAE,gBAA6B,GACrC,MAAM,CAER;AAMD,wBAAsB,cAAc,CAClC,QAAQ,EAAE,MAAM,EAChB,OAAO,GAAE,qBAA0B,GAClC,OAAO,CAAC,gBAAgB,CAAC,CAG3B;AAED,wBAAsB,wBAAwB,CAC5C,QAAQ,EAAE,MAAM,EAChB,OAAO,EAAE,qBAAqB,EAC9B,MAAM,EAAE,MAAM,EACd,UAAU,CAAC,EAAE,UAAU,EACvB,gBAAgB,CAAC,EAAE,iBAAiB,GACnC,OAAO,CAAC,gBAAgB,CAAC,CAe3B"}
+{"version":3,"file":"query.d.ts","sourceRoot":"","sources":["../src/query.ts"],"names":[],"mappings":"AAIA,OAAO,EAEL,KAAK,UAAU,EAMhB,MAAM,kBAAkB,CAAA;AAwCzB,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,YAAY,CAAA;AAGnD,OAAO,KAAK,EACV,MAAM,EAEN,qBAAqB,EACrB,gBAAgB,EAEhB,gBAAgB,EAEhB,aAAa,EACb,YAAY,EAGb,MAAM,YAAY,CAAA;AA0DnB,eAAO,MAAM,qCAAqC,6BAA6B,CAAA;AAsD/E,wBAAsB,MAAM,CAAC,KAAK,EAAE,MAAM,EAAE,OAAO,GAAE,aAAkB,GAAG,OAAO,CAAC,YAAY,EAAE,CAAC,CAIhG;AAED,wBAAsB,gBAAgB,CACpC,KAAK,EAAE,MAAM,EACb,OAAO,EAAE,aAAa,EACtB,MAAM,EAAE,MAAM,EACd,UAAU,CAAC,EAAE,UAAU,EACvB,YAAY,CAAC,EAAE,WAAW,EAC1B,gBAAgB,CAAC,EAAE,iBAAiB,EACpC,mBAAmB,UAAQ,GAC1B,OAAO,CAAC,YAAY,EAAE,CAAC,CAkBzB;AAkWD,wBAAgB,oBAAoB,CAClC,eAAe,EAAE,MAAM,EACvB,OAAO,GAAE,gBAA6B,GACrC,MAAM,CAER;AAED,wBAAgB,qBAAqB,CACnC,eAAe,EAAE,MAAM,EACvB,OAAO,GAAE,gBAA6B,GACrC,MAAM,CAER;AAMD,wBAAsB,cAAc,CAClC,QAAQ,EAAE,MAAM,EAChB,OAAO,GAAE,qBAA0B,GAClC,OAAO,CAAC,gBAAgB,CAAC,CAG3B;AAED,wBAAsB,wBAAwB,CAC5C,QAAQ,EAAE,MAAM,EAChB,OAAO,EAAE,qBAAqB,EAC9B,MAAM,EAAE,MAAM,EACd,UAAU,CAAC,EAAE,UAAU,EACvB,gBAAgB,CAAC,EAAE,iBAAiB,GACnC,OAAO,CAAC,gBAAgB,CAAC,CAe3B"}

package/dist/query.js

@@ -1,5 +1,7 @@
 import { createHash } from "node:crypto";
 import { channel } from "node:diagnostics_channel";
+import { stat } from "node:fs/promises";
+import path from "node:path";
 import { BooleanQuery, MatchQuery, Occur, Operator, PhraseQuery, } from "@lancedb/lancedb";
 import { citationForCoordinates, stripCitationCoordinates } from "./citation.js";
 import { loadConfig } from "./config.js";
@@ -8,12 +10,15 @@ import { embedText } from "./embeddings.js";
 import { RagmirError } from "./errors.js";
 import { acquireGenerationReadLease } from "./generation-retention.js";
 import { indexFreshnessWarning } from "./index-diagnostics.js";
+import { lexicalPolicyCurrent } from "./index-policy.js";
 import { knowledgeBaseIdentity } from "./knowledge-bases.js";
 import { addLexicalDocument, lexicalDocument, lexicalDocumentScore, } from "./lexical-scoring.js";
 import { operationSignal, throwIfAborted } from "./operation.js";
 import { sanitizeRetrievalQuery } from "./query-sanitizer.js";
-import { abstentionFilter, fusionCandidateDepth, queryEvidence, rankHybridRows, rankingPolicyFingerprint, rankingPolicyFor, tokensAreLexicallyRelated, } from "./ranking.js";
+import { abstentionFilter, fusionCandidateDepth, fuzzyMatchPrefilter, queryEvidence, queryTermCoverage, rankHybridRows, rankingPolicyFingerprint, rankingPolicyFor, tokensAreFuzzyRelated, tokensAreLexicallyRelated, weakEvidenceFilter, } from "./ranking.js";
 import { selectDiverseRows } from "./retrieval-diversity.js";
+import { canonicalUserPath, isCaseInsensitiveFileSystem, resolveExistingPath, unicodePathVariants, } from "./source-paths.js";
+import { definitionBoostOf, localeDocumentKey, sourceWeightOf } from "./source-weights.js";
 import { closeIndexReadSnapshot, loadIndexReadSnapshot } from "./store.js";
 import { normalizeForMatch, tokenize } from "./text.js";
 import { configureAdaptiveVectorQuery, vectorIndexManifestCompatible } from "./vector-index.js";
@@ -31,6 +36,14 @@ const DIVERSITY_CANDIDATE_MULTIPLIER = 4;
 const MAX_VECTOR_CANDIDATES = 1_000;
 const MAX_LEXICAL_CANDIDATES = 4_000;
 const FULL_TEXT_INDEX_NAME = "searchText_idx";
+// Document frequencies only weigh words: past 2% of the passages a word is common either way, and
+// counting deeper only adds full-text reads (3 to 6 ms per word on a 44,000-passage index).
+const TERM_FREQUENCY_SHARE = 0.02;
+const MIN_TERM_FREQUENCY_LIMIT = 500;
+const MAX_TERM_FREQUENCY_LIMIT = 5_000;
+const MAX_CACHED_TERM_GENERATIONS = 4;
+const UNSEGMENTED_SCRIPT_PATTERN = /[\p{Script=Thai}\p{Script=Lao}\p{Script=Khmer}\p{Script=Myanmar}\p{Script=Han}\p{Script=Hiragana}\p{Script=Katakana}\p{Script=Hangul}]/u;
+const termFrequencyCache = new Map();
 const LEXICAL_IDENTIFIER_PATTERN = /[\p{L}\p{N}]+(?:[-_.][\p{L}\p{N}]+)+/gu;
 const SOURCE_PATH_QUERY_PATTERN = /^[\p{L}\p{N}_. /\\-]+\.[a-z0-9]{1,12}$/iu;
 export const QUERY_EXPLANATION_DIAGNOSTICS_CHANNEL = "ragmir:query-explanation";
@@ -57,6 +70,8 @@ const SEARCH_COLUMNS = [
     "locationLabel",
     "cellStart",
     "cellEnd",
+    "bytes",
+    "mtimeMs",
 ];
 const VECTOR_SEARCH_COLUMNS = [...SEARCH_COLUMNS, "_distance"];
 const FTS_SEARCH_COLUMNS = [...SEARCH_COLUMNS, "_score"];
@@ -105,8 +120,13 @@ async function searchWithinGeneration(query, options, config, snapshot, activeSi
     if (!sanitized.query || queryTokens.length === 0) {
         return [];
     }
-    const retrievalPredicate = searchPredicate(options.includePaths, options.excludePaths, options.contextPaths);
+    const scope = resolveSearchScope(config, options.scope);
+    const retrievalPredicate = searchPredicate([scope?.includePaths, options.includePaths], [...(scope?.excludePaths ?? []), ...(options.excludePaths ?? [])], options.contextPaths);
     let embeddingQueueMs = 0;
+    // Indexes built before folded keyword text cannot answer exact word frequencies reliably.
+    const termFrequenciesPromise = snapshot.manifest && lexicalPolicyCurrent(snapshot.manifest)
+        ? queryTermFrequencies(table, queryTokens, snapshot).catch(() => null)
+        : Promise.resolve(null);
     const lexicalCandidatesPromise = lexicalCandidateRows(table, sanitized.query, {
         ftsLimit: lexicalCandidateLimit(candidateDemand, config.retrievalProfile),
         fallbackBatchSize: config.hybridTextScanLimit,
@@ -120,10 +140,25 @@ async function searchWithinGeneration(query, options, config, snapshot, activeSi
     }).then(async (vector) => {
         throwIfAborted(signal);
         const manifest = assertVectorIndexCompatibility(config, snapshot.manifest, vector.length);
-        const vectorQuery = configureAdaptiveVectorQuery(table.vectorSearch(vector).select(VECTOR_SEARCH_COLUMNS), manifest.vectorIndex, options.vectorSearchMode === "exact");
-        return (await (retrievalPredicate ? vectorQuery.where(retrievalPredicate) : vectorQuery)
-            .limit(vectorCandidateLimit(candidateDemand, config.retrievalProfile))
-            .toArray());
+        const limit = vectorCandidateLimit(candidateDemand, config.retrievalProfile);
+        const nearest = async (predicate) => {
+            const vectorQuery = configureAdaptiveVectorQuery(table.vectorSearch(vector).select(VECTOR_SEARCH_COLUMNS), manifest.vectorIndex, options.vectorSearchMode === "exact");
+            return (await (predicate ? vectorQuery.where(predicate) : vectorQuery)
+                .limit(limit)
+                .toArray());
+        };
+        const rows = await nearest(retrievalPredicate);
+        const crowding = crowdingDocuments(rows, topK);
+        if (crowding.length === 0) {
+            return rows;
+        }
+        // One large file (an export, a log, a spreadsheet) filled the pool with its own chunks, yet
+        // shows at most maxChunksPerDocument of them; a second pass reaches the other documents.
+        throwIfAborted(signal);
+        const others = `NOT (${crowding.map(relativePathEquals).join(" OR ")})`;
+        const more = await nearest(retrievalPredicate ? `(${retrievalPredicate}) AND ${others}` : others);
+        const seen = new Set(rows.map(rowKey));
+        return [...rows, ...more.filter((row) => !seen.has(rowKey(row)))];
     });
     const [vectorRowsOutcome, lexicalCandidatesOutcome] = await Promise.allSettled([
         vectorRowsPromise,
@@ -137,24 +172,39 @@ async function searchWithinGeneration(query, options, config, snapshot, activeSi
     }
     const vectorRows = vectorRowsOutcome.value;
     const lexicalCandidates = lexicalCandidatesOutcome.value;
+    const termStatistics = withFuzzyMatches(await termFrequenciesPromise, queryTokens, [
+        ...lexicalCandidates.rows,
+        ...vectorRows,
+    ]);
     throwIfAborted(signal);
-    const rankingPolicy = rankingPolicyFor(config.embeddingProvider, config.retrievalProfile, maxChunksPerDocument);
-    const rankedRows = rankHybridRows(sanitized.query, vectorRows, lexicalCandidates.rows, rankingPolicy);
+    const rankingPolicy = rankingPolicyFor(config.embeddingProvider, config.retrievalProfile, maxChunksPerDocument, config.embeddingModel);
+    const weightOf = sourceWeightOf(config);
+    const definitionBoost = definitionBoostOf(queryTokens);
+    const rankedRows = rankHybridRows(sanitized.query, vectorRows, lexicalCandidates.rows, rankingPolicy, (row) => weightOf(row.relativePath) * definitionBoost(row));
     const isExactPathMatch = (row) => lexicalCandidates.exactPathMatches.has(rowKey(row));
-    const passesAbstention = abstentionFilter(evidence, rankingPolicy);
+    const passesAbstention = abstentionFilter(evidence, rankingPolicy, termStatistics);
+    const hasWeakEvidence = weakEvidenceFilter(evidence, rankingPolicy, termStatistics);
+    const coverageOf = options.explain && termStatistics ? queryTermCoverage(evidence, termStatistics) : null;
     const orderedRows = rankedRows.sort((left, right) => Number(isExactPathMatch(right.row)) - Number(isExactPathMatch(left.row)));
     const diversity = selectDiverseRows(orderedRows, {
         topK,
         maxChunksPerDocument,
         isExactPathMatch,
+        ...(config.collapseLocaleVariants
+            ? { documentKeyOf: (row) => localeDocumentKey(row.relativePath) }
+            : {}),
         isRelevant: (row) => isExactPathMatch(row) || passesAbstention(row),
     });
     const rows = diversity.rows;
-    const contextByRow = await contextChunksByRow(table, rows, contextRadius, retrievalPredicate);
+    const [contextByRow, sourceStatuses] = await Promise.all([
+        contextChunksByRow(table, rows, contextRadius, retrievalPredicate),
+        sourceStatusesForRows(config.projectRoot, rows),
+    ]);
     throwIfAborted(signal);
     const knowledgeBaseId = knowledgeBaseIdentity(config.projectRoot)?.id ?? null;
     const results = rows.map((row) => {
         const vectorDistance = typeof row.row._distance === "number" ? row.row._distance : null;
+        const sourceStatus = sourceStatuses.get(row.row.relativePath);
         return {
             source: row.row.source,
             relativePath: row.row.relativePath,
@@ -171,6 +221,10 @@ async function searchWithinGeneration(query, options, config, snapshot, activeSi
             pageEnd: nullablePageNumber(row.row.pageEnd),
             context: contextByRow.get(rowKey(row.row)) ?? [],
             evidence: evidenceVersionForRow(row.row, snapshot, knowledgeBaseId),
+            ...(sourceStatus === undefined ? {} : { sourceStatus }),
+            ...(!isExactPathMatch(row.row) && hasWeakEvidence(row.row)
+                ? { weakEvidence: true }
+                : {}),
             ...(options.explain
                 ? {
                     score: {
@@ -179,6 +233,7 @@ async function searchWithinGeneration(query, options, config, snapshot, activeSi
                         originalQueryLength: sanitized.originalLength,
                         fusion: "rrf",
                         combinedScore: row.combinedScore,
+                        scoreMultiplier: row.scoreMultiplier,
                         vectorContribution: row.vectorScore,
                         lexicalContribution: row.lexicalScore,
                         vectorRank: row.vectorRank,
@@ -202,6 +257,7 @@ async function searchWithinGeneration(query, options, config, snapshot, activeSi
                         workloadQueueMs: workloadQueueMs + embeddingQueueMs,
                         rankingPolicyFingerprint: rankingPolicyFingerprint(rankingPolicy),
                         matchedTerms: matchedQueryTerms(config.projectRoot, queryTokens, row.row.searchText),
+                        queryTermCoverage: coverageOf ? coverageOf(row.row.searchText) : null,
                     },
                 }
                 : {}),
@@ -209,6 +265,132 @@ async function searchWithinGeneration(query, options, config, snapshot, activeSi
     });
     return results;
 }
+const CROWDING_MIN_CHUNKS = 4;
+const CROWDING_SHARE = 0.25;
+/** Documents holding a quarter or more of a candidate pool that reaches too few documents. */
+function crowdingDocuments(rows, topK) {
+    if (rows.length < CROWDING_MIN_CHUNKS * 2) {
+        return [];
+    }
+    const counts = new Map();
+    for (const row of rows) {
+        counts.set(row.relativePath, (counts.get(row.relativePath) ?? 0) + 1);
+    }
+    if (counts.size >= Math.min(rows.length, topK * 3)) {
+        return [];
+    }
+    const threshold = Math.max(CROWDING_MIN_CHUNKS, Math.ceil(rows.length * CROWDING_SHARE));
+    return [...counts.entries()]
+        .filter(([, count]) => count >= threshold)
+        .map(([relativePath]) => relativePath);
+}
+/**
+ * Compare each cited file with the size and modification time recorded at indexing. Agents can then
+ * tell evidence that no longer matches the file on disk from current evidence, at one stat per file.
+ */
+async function sourceStatusesForRows(projectRoot, rows) {
+    const byPath = new Map();
+    for (const { row } of rows) {
+        if (!byPath.has(row.relativePath))
+            byPath.set(row.relativePath, row);
+    }
+    const statuses = new Map();
+    await Promise.all([...byPath.entries()].map(async ([relativePath, row]) => {
+        if (typeof row.bytes !== "number" || typeof row.mtimeMs !== "number") {
+            return;
+        }
+        const absolutePath = resolveExistingPath(path.join(projectRoot, ...relativePath.split("/")), isCaseInsensitiveFileSystem(projectRoot));
+        const info = absolutePath === null ? null : await stat(absolutePath).catch(() => null);
+        if (!info?.isFile()) {
+            statuses.set(relativePath, "missing");
+        }
+        else if (info.size !== row.bytes || info.mtimeMs !== row.mtimeMs) {
+            statuses.set(relativePath, "modified");
+        }
+    }));
+    return statuses;
+}
+/**
+ * Count, for each query word, the passages whose keyword text contains it, with one bounded
+ * full-text query per word. Cached per index generation: words repeat across an agent's searches.
+ */
+async function queryTermFrequencies(table, tokens, snapshot) {
+    const stats = await table.indexStats(FULL_TEXT_INDEX_NAME).catch(() => undefined);
+    if (!stats || stats.numUnindexedRows > 0) {
+        return null;
+    }
+    const cacheKey = `${snapshot.tableName}\0${snapshot.manifestFingerprint ?? ""}`;
+    let cache = termFrequencyCache.get(cacheKey);
+    if (!cache) {
+        cache = new Map();
+        termFrequencyCache.set(cacheKey, cache);
+        while (termFrequencyCache.size > MAX_CACHED_TERM_GENERATIONS) {
+            const oldest = termFrequencyCache.keys().next().value;
+            if (oldest === undefined)
+                break;
+            termFrequencyCache.delete(oldest);
+        }
+    }
+    const generationCache = cache;
+    const frequencyLimit = Math.min(MAX_TERM_FREQUENCY_LIMIT, Math.max(MIN_TERM_FREQUENCY_LIMIT, Math.ceil(stats.numIndexedRows * TERM_FREQUENCY_SHARE)));
+    const unique = [...new Set(tokens)];
+    const unmeasuredTerms = new Set(unique.filter((token) => UNSEGMENTED_SCRIPT_PATTERN.test(token)));
+    const measured = unique.filter((token) => !unmeasuredTerms.has(token));
+    if (measured.length === 0) {
+        return null;
+    }
+    await Promise.all(measured
+        .filter((token) => !generationCache.has(token))
+        .map(async (token) => {
+        const rows = await table
+            .search(new MatchQuery(token, "searchText"), "fts", "searchText")
+            .select(["id"])
+            .limit(frequencyLimit)
+            .toArray();
+        generationCache.set(token, rows.length);
+    }));
+    return {
+        documentCount: stats.numIndexedRows,
+        documentFrequencies: new Map(measured.map((token) => [token, generationCache.get(token) ?? 0])),
+        ...(unmeasuredTerms.size > 0 ? { unmeasuredTerms } : {}),
+    };
+}
+/** Mark absent words that a candidate still matches fuzzily, so typos are not treated as noise. */
+function withFuzzyMatches(statistics, tokens, candidateRows) {
+    if (!statistics) {
+        return null;
+    }
+    const measured = [...new Set(tokens)].filter((token) => !statistics.unmeasuredTerms?.has(token));
+    // Fuzzy matches only decide whether no query word is known at all; skip the scan otherwise.
+    if (measured.some((token) => (statistics.documentFrequencies.get(token) ?? 0) > 0)) {
+        return statistics;
+    }
+    const absent = measured.filter((token) => token.length >= 7);
+    if (absent.length === 0 || candidateRows.length === 0) {
+        return statistics;
+    }
+    const prefilters = absent.map((token) => ({ token, possible: fuzzyMatchPrefilter(token) }));
+    const fuzzyMatchedTerms = new Set();
+    for (const row of candidateRows) {
+        const folded = normalizeForMatch(row.searchText);
+        const pending = prefilters
+            .filter(({ token, possible }) => !fuzzyMatchedTerms.has(token) && possible(folded))
+            .map(({ token }) => token);
+        if (pending.length === 0) {
+            continue;
+        }
+        for (const textToken of tokenize(row.searchText)) {
+            for (const token of pending) {
+                if (!fuzzyMatchedTerms.has(token) && tokensAreFuzzyRelated(token, textToken)) {
+                    fuzzyMatchedTerms.add(token);
+                }
+            }
+        }
+        if (fuzzyMatchedTerms.size === absent.length)
+            break;
+    }
+    return { ...statistics, fuzzyMatchedTerms };
+}
 export function vectorCandidateLimit(candidateDemand, profile = "balanced") {
     return Math.min(MAX_VECTOR_CANDIDATES, candidateDepth(candidateDemand, profile));
 }
@@ -273,7 +455,7 @@ async function expandCitationWithinGeneration(citation, options, config, snapsho
     const rows = (await table
         .query()
         .select(SEARCH_COLUMNS)
-        .where(`relativePath = ${sqlString(target.relativePath)} AND chunkIndex >= ${minimumChunkIndex} AND chunkIndex <= ${maximumChunkIndex}`)
+        .where(`${relativePathEquals(target.relativePath)} AND chunkIndex >= ${minimumChunkIndex} AND chunkIndex <= ${maximumChunkIndex}`)
         .toArray());
     throwIfAborted(signal);
     const targetRow = rows.find((row) => row.chunkIndex === target.chunkIndex);
@@ -287,7 +469,7 @@ async function expandCitationWithinGeneration(citation, options, config, snapsho
             passages: [],
         };
     }
-    if (citationForRow(targetRow) !== requestedCitation) {
+    if (canonicalUserPath(citationForRow(targetRow)) !== canonicalUserPath(requestedCitation)) {
         throw new Error("Citation coordinates do not match the indexed passage.");
     }
     const evidence = evidenceVersionForRow(targetRow, snapshot, knowledgeBaseIdentity(config.projectRoot)?.id ?? null);
@@ -300,7 +482,7 @@ async function expandCitationWithinGeneration(citation, options, config, snapsho
         const headers = (await table
             .query()
             .select(SEARCH_COLUMNS)
-            .where(`relativePath = ${sqlString(target.relativePath)} AND chunkIndex = ${targetRow.headerChunkIndex}`)
+            .where(`${relativePathEquals(target.relativePath)} AND chunkIndex = ${targetRow.headerChunkIndex}`)
             .limit(1)
             .toArray());
         throwIfAborted(signal);
@@ -380,7 +562,7 @@ async function lexicalCandidateRows(table, query, options) {
             const exactPathMatches = new Set(sourcePathQuery
                 ? sourcePathRows
                     .filter((row) => sourcePathQuery.exactRelativePath === null ||
-                    row.relativePath === sourcePathQuery.exactRelativePath)
+                    row.relativePath.normalize("NFC") === sourcePathQuery.exactRelativePath)
                     .map(rowKey)
                 : []);
             return {
@@ -416,7 +598,7 @@ async function lexicalCandidateRows(table, query, options) {
     const exactPathMatches = new Set(sourcePathQuery
         ? sourcePathRows
             .filter((row) => sourcePathQuery.exactRelativePath === null ||
-            row.relativePath === sourcePathQuery.exactRelativePath)
+            row.relativePath.normalize("NFC") === sourcePathQuery.exactRelativePath)
             .map(rowKey)
         : []);
     return {
@@ -498,18 +680,34 @@ async function executeSourcePathQuery(table, sourcePathQuery, limit, retrievalPr
         : sourcePathQuery.predicate;
     return (await table.query().select(SEARCH_COLUMNS).where(predicate).limit(limit).toArray()).map((row) => ({
         ...row,
-        _score: sourcePathQuery.exactRelativePath === row.relativePath
+        _score: sourcePathQuery.exactRelativePath === row.relativePath.normalize("NFC")
             ? Number.MAX_SAFE_INTEGER
             : Number.MAX_SAFE_INTEGER - 1,
     }));
 }
-function searchPredicate(includePaths, excludePaths, contextPaths) {
-    const includes = normalizePathPrefixes(includePaths);
+function resolveSearchScope(config, scopeName) {
+    if (scopeName === undefined) {
+        return null;
+    }
+    const scope = config.scopes[scopeName];
+    if (!scope) {
+        const names = Object.keys(config.scopes);
+        throw new RagmirError("INVALID_ARGUMENT", names.length === 0
+            ? `Unknown scope "${scopeName}": this knowledge base defines no scopes.`
+            : `Unknown scope "${scopeName}". Configured scopes: ${names.join(", ")}.`);
+    }
+    return scope;
+}
+/** Each include group narrows the search (AND); paths inside one group are alternatives (OR). */
+function searchPredicate(includeGroups, excludePaths, contextPaths) {
     const excludes = normalizePathPrefixes(excludePaths);
     const contexts = normalizeContextPaths(contextPaths);
     const clauses = [];
-    if (includes.length > 0) {
-        clauses.push(`(${includes.map(pathPrefixPredicate).join(" OR ")})`);
+    for (const includePaths of includeGroups) {
+        const includes = normalizePathPrefixes(includePaths);
+        if (includes.length > 0) {
+            clauses.push(`(${includes.map(pathPrefixPredicate).join(" OR ")})`);
+        }
     }
     if (excludes.length > 0) {
         clauses.push(`NOT (${excludes.map(pathPrefixPredicate).join(" OR ")})`);
@@ -520,15 +718,19 @@ function searchPredicate(includePaths, excludePaths, contextPaths) {
     return clauses.length === 0 ? null : clauses.join(" AND ");
 }
 function normalizePathPrefixes(prefixes) {
-    return [
-        ...new Set((prefixes ?? [])
-            .map((prefix) => prefix.trim().replaceAll("\\", "/").replace(/^\.\//u, ""))
-            .map((prefix) => prefix.replace(/\/+$/u, ""))
-            .filter(Boolean)),
-    ];
+    return [...new Set((prefixes ?? []).map(canonicalUserPath).filter(Boolean))];
 }
+/** Match the canonical path and its decomposed form, which indexes built before 6.2 may hold. */
 function pathPrefixPredicate(prefix) {
-    return `(relativePath = ${sqlString(prefix)} OR starts_with(relativePath, ${sqlString(`${prefix}/`)}))`;
+    return unicodePathVariants(prefix)
+        .map((variant) => `(relativePath = ${sqlString(variant)} OR starts_with(relativePath, ${sqlString(`${variant}/`)}))`)
+        .join(" OR ");
+}
+function relativePathEquals(relativePath) {
+    const variants = unicodePathVariants(relativePath);
+    return variants.length === 1
+        ? `relativePath = ${sqlString(relativePath)}`
+        : `relativePath IN (${variants.map(sqlString).join(", ")})`;
 }
 function normalizeContextPaths(contextPaths) {
     return [...new Set((contextPaths ?? []).map((value) => value.trim()).filter(Boolean))];
@@ -665,7 +867,7 @@ function parseCitationTarget(citation) {
         throw new Error("Citation must end with a Ragmir chunk suffix such as `#3`.");
     }
     const chunkIndex = Number.parseInt(chunkIndexText, 10);
-    let relativePath = citation.slice(0, match.index);
+    let relativePath = canonicalUserPath(citation.slice(0, match.index));
     relativePath = stripCitationCoordinates(relativePath);
     if (!relativePath) {
         throw new Error("Citation must include a source path before its chunk suffix.");
@@ -782,7 +984,7 @@ function isFuzzyLexicalTerm(term) {
     return term.length >= 7 && /^[a-z0-9_.-]+$/u.test(term);
 }
 function sourcePathPredicateForQuery(query) {
-    const normalized = query.trim().replaceAll("\\", "/").replace(/^\.\//u, "");
+    const normalized = canonicalUserPath(query);
     if (!SOURCE_PATH_QUERY_PATTERN.test(normalized)) {
         return null;
     }
@@ -790,11 +992,10 @@ function sourcePathPredicateForQuery(query) {
     if (!fileName) {
         return null;
     }
-    const clauses = new Set([
-        `relativePath = ${sqlString(normalized)}`,
-        `relativePath = ${sqlString(fileName)}`,
-        `ends_with(relativePath, ${sqlString(`/${fileName}`)})`,
-    ]);
+    const clauses = new Set([normalized, fileName].flatMap((value) => [
+        relativePathEquals(value),
+        ...unicodePathVariants(fileName).map((variant) => `ends_with(relativePath, ${sqlString(`/${variant}`)})`),
+    ]));
     return {
         predicate: `(${[...clauses].join(" OR ")})`,
         exactRelativePath: normalized.includes("/") ? normalized : null,