@jcode.labs/ragmir 6.1.5 → 6.2.0

package/dist/knowledge-bases.js

@@ -1,10 +1,13 @@
-import { existsSync } from "node:fs";
+import { existsSync, readFileSync } from "node:fs";
 import path from "node:path";
 import fg from "fast-glob";
-import { CONFIG_PATH, LEGACY_CONFIG_PATH } from "./defaults.js";
+import { CONFIG_PATH, LEGACY_CONFIG_PATH, SHARED_CONFIG_FILENAME } from "./defaults.js";
+import { canonicalSourcePath } from "./source-paths.js";
 const KNOWLEDGE_BASE_PATTERNS = [
     CONFIG_PATH,
     `**/${CONFIG_PATH}`,
+    SHARED_CONFIG_FILENAME,
+    `**/${SHARED_CONFIG_FILENAME}`,
     LEGACY_CONFIG_PATH,
     `**/${LEGACY_CONFIG_PATH}`,
 ];
@@ -47,7 +50,8 @@ export async function discoverKnowledgeBases(start = process.cwd()) {
         ignore: KNOWLEDGE_BASE_DISCOVERY_IGNORES,
     });
     const byProjectRoot = new Map();
-    for (const configPath of configPaths.sort()) {
+    // fast-glob returns forward slashes on Windows; identities use native absolute paths.
+    for (const configPath of configPaths.map((entry) => path.resolve(entry)).sort()) {
         const configuredRoot = configuredRootForConfig(configPath);
         const existing = byProjectRoot.get(configuredRoot.projectRoot);
         if (!existing || (existing.legacy && !configuredRoot.legacy)) {
@@ -91,6 +95,10 @@ function configuredRootAt(projectRoot) {
     if (existsSync(configPath)) {
         return { projectRoot, configPath, legacy: false };
     }
+    const sharedConfigPath = path.join(projectRoot, SHARED_CONFIG_FILENAME);
+    if (existsSync(sharedConfigPath)) {
+        return { projectRoot, configPath: sharedConfigPath, legacy: false };
+    }
     const legacyConfigPath = path.join(projectRoot, LEGACY_CONFIG_PATH);
     if (existsSync(legacyConfigPath)) {
         return { projectRoot, configPath: legacyConfigPath, legacy: true };
@@ -98,6 +106,9 @@ function configuredRootAt(projectRoot) {
     return null;
 }
 function configuredRootForConfig(configPath) {
+    if (path.basename(configPath) === SHARED_CONFIG_FILENAME) {
+        return { projectRoot: path.dirname(configPath), configPath, legacy: false };
+    }
     const configDirectory = path.dirname(configPath);
     const legacy = path.basename(configDirectory) === path.dirname(LEGACY_CONFIG_PATH);
     return {
@@ -108,6 +119,64 @@ function configuredRootForConfig(configPath) {
 }
 function knowledgeBaseId(workspaceRoot, projectRoot) {
     const relativePath = path.relative(workspaceRoot, projectRoot);
-    return relativePath.length === 0 ? "." : relativePath.split(path.sep).join("/");
+    return relativePath.length === 0 ? "." : canonicalSourcePath(relativePath);
+}
+/** Name, purpose, and scopes that tell an agent which project this base answers for. */
+export function knowledgeBaseProfile(config) {
+    return {
+        name: config.name ?? (path.basename(config.projectRoot) || config.projectRoot),
+        description: config.description,
+        projectRoot: config.projectRoot,
+        scopes: Object.entries(config.scopes).map(([name, scope]) => ({
+            name,
+            description: scope.description ?? null,
+        })),
+    };
+}
+/**
+ * Synchronous, validation-free read of the profile fields, for building an MCP server whose
+ * instructions must exist before the first request. Invalid values fall back to defaults; the
+ * validated config still governs every tool call.
+ */
+export function readKnowledgeBaseProfileSync(projectRoot) {
+    const raw = {};
+    for (const configPath of [
+        path.join(projectRoot, SHARED_CONFIG_FILENAME),
+        path.join(projectRoot, CONFIG_PATH),
+        path.join(projectRoot, LEGACY_CONFIG_PATH),
+    ]) {
+        try {
+            const value = JSON.parse(readFileSync(configPath, "utf8"));
+            if (typeof value === "object" && value !== null && !Array.isArray(value)) {
+                Object.assign(raw, value);
+            }
+        }
+        catch {
+            // Missing or unreadable files leave the defaults in place.
+        }
+    }
+    const text = (value) => typeof value === "string" && value.trim().length > 0 ? value.trim() : null;
+    const scopes = typeof raw.scopes === "object" && raw.scopes !== null && !Array.isArray(raw.scopes)
+        ? Object.fromEntries(Object.entries(raw.scopes).map(([name, scope]) => [
+            name,
+            {
+                includePaths: [],
+                excludePaths: [],
+                ...scopeDescription(scope, text),
+            },
+        ]))
+        : {};
+    return knowledgeBaseProfile({
+        projectRoot,
+        name: text(raw.name),
+        description: text(raw.description),
+        scopes,
+    });
+}
+function scopeDescription(scope, text) {
+    const description = typeof scope === "object" && scope !== null && "description" in scope
+        ? text(scope.description)
+        : null;
+    return description === null ? {} : { description };
 }
 //# sourceMappingURL=knowledge-bases.js.map

package/dist/knowledge-bases.js.map

@@ -1 +1 @@
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package/dist/mcp-output.d.ts

@@ -1,3 +1,4 @@
+import type { SeenCitationStub } from "./mcp-session.js";
 import type { CompactSearchResult, ExpandedCitation, McpOutputTool, SearchResult } from "./types.js";
 export declare const MIN_MCP_OUTPUT_BYTES = 1024;
 export interface McpOutputMetadata {
@@ -12,10 +13,10 @@ export interface McpOutputMetadata {
 }
 export interface McpTextResult {
     [key: string]: unknown;
-    content: [{
+    content: Array<{
         type: "text";
         text: string;
-    }];
+    }>;
     _meta: {
         "ragmir/output": McpOutputMetadata;
     };
@@ -30,7 +31,12 @@ export interface McpCitationPreview {
         id: string;
     };
 }
-export type McpSearchPayload = Array<SearchResult | CompactSearchResult | McpCitationPreview>;
+export type McpSearchPayload = Array<SearchResult | CompactSearchResult | McpCitationPreview | SeenCitationStub>;
+/** One group per query of a batched search; the groups share one output budget. */
+export type McpSearchGroupsPayload = Array<{
+    query: string;
+    results: McpSearchPayload;
+}>;
 export interface McpExpandedPassagePreview {
     chunkIndex: number;
     citation: string;
@@ -64,6 +70,11 @@ interface BudgetMcpJsonOptions<T> {
 export declare function resolveMcpOutputBudget(configured: number, requested?: number): number;
 export declare function budgetMcpJson<T>(options: BudgetMcpJsonOptions<T>): BudgetedMcpResult;
 export declare function fitSearchPayload(value: McpSearchPayload, maxBytes: number): ReducedPayload<McpSearchPayload>;
+/**
+ * Fit batched results into one budget: drop the lowest-ranked result of the largest group first, so
+ * every query keeps its best evidence, then fall back to citation previews.
+ */
+export declare function fitSearchGroups(value: McpSearchGroupsPayload, maxBytes: number): ReducedPayload<McpSearchGroupsPayload>;
 export declare function fitExpandedCitation(value: McpExpandedCitationPayload, maxBytes: number): ReducedPayload<McpExpandedCitationPayload>;
 export interface BoundedJsonMetadata {
     source: string;

package/dist/mcp-output.d.ts.map

@@ -1 +1 @@
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package/dist/mcp-output.js

@@ -68,6 +68,43 @@ export function fitSearchPayload(value, maxBytes) {
     }
     return { value: [], omittedItems: value.length, truncated: value.length > 0 };
 }
+/**
+ * Fit batched results into one budget: drop the lowest-ranked result of the largest group first, so
+ * every query keeps its best evidence, then fall back to citation previews.
+ */
+export function fitSearchGroups(value, maxBytes) {
+    if (jsonBytes(value) <= maxBytes) {
+        return { value, omittedItems: 0, truncated: false };
+    }
+    const groups = value.map((group) => ({ query: group.query, results: [...group.results] }));
+    let omittedItems = 0;
+    while (jsonBytes(groups) > maxBytes) {
+        const largest = groups.reduce((current, group) => group.results.length > 1 && group.results.length > (current?.results.length ?? 1)
+            ? group
+            : current, undefined);
+        if (!largest) {
+            break;
+        }
+        largest.results.pop();
+        omittedItems += 1;
+    }
+    if (jsonBytes(groups) <= maxBytes) {
+        return { value: groups, omittedItems, truncated: true };
+    }
+    const previews = groups.map((group) => ({
+        query: group.query,
+        results: group.results.map(toCitationPreview),
+    }));
+    if (jsonBytes(previews) <= maxBytes) {
+        return { value: previews, omittedItems, truncated: true };
+    }
+    const total = value.reduce((sum, group) => sum + group.results.length, 0);
+    return {
+        value: value.map((group) => ({ query: group.query, results: [] })),
+        omittedItems: total,
+        truncated: total > 0,
+    };
+}
 export function fitExpandedCitation(value, maxBytes) {
     if (jsonBytes(value) <= maxBytes) {
         return { value, omittedItems: 0, truncated: false };

package/dist/mcp-output.js.map

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package/dist/mcp-registrations.d.ts

@@ -0,0 +1,9 @@
+import type { McpServerRegistration } from "./types.js";
+/**
+ * Find Ragmir MCP servers registered for this project and for every project, in Claude Code and
+ * Codex configuration files. Reads only; a user-scope server answers every workspace from one
+ * base, and an unapproved `.mcp.json` server never starts in interactive Claude Code sessions.
+ */
+export declare function inspectMcpRegistrations(projectRoot: string, homeDir: string): McpServerRegistration[];
+export declare function mcpRegistrationWarnings(projectRoot: string, registrations: readonly McpServerRegistration[]): string[];
+//# sourceMappingURL=mcp-registrations.d.ts.map

package/dist/mcp-registrations.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"mcp-registrations.d.ts","sourceRoot":"","sources":["../src/mcp-registrations.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAA+C,qBAAqB,EAAE,MAAM,YAAY,CAAA;AAQpG;;;;GAIG;AACH,wBAAgB,uBAAuB,CACrC,WAAW,EAAE,MAAM,EACnB,OAAO,EAAE,MAAM,GACd,qBAAqB,EAAE,CAgCzB;AAED,wBAAgB,uBAAuB,CACrC,WAAW,EAAE,MAAM,EACnB,aAAa,EAAE,SAAS,qBAAqB,EAAE,GAC9C,MAAM,EAAE,CA2BV"}

package/dist/mcp-registrations.js

@@ -0,0 +1,247 @@
+import { existsSync, readFileSync } from "node:fs";
+import path from "node:path";
+import { CONFIG_PATH, RAGMIR_PROJECT_ROOT_ENV, SHARED_CONFIG_FILENAME } from "./defaults.js";
+import { isRecord } from "./guards.js";
+/**
+ * Find Ragmir MCP servers registered for this project and for every project, in Claude Code and
+ * Codex configuration files. Reads only; a user-scope server answers every workspace from one
+ * base, and an unapproved `.mcp.json` server never starts in interactive Claude Code sessions.
+ */
+export function inspectMcpRegistrations(projectRoot, homeDir) {
+    const registrations = [];
+    const claudeState = readJson(path.join(homeDir, ".claude.json"));
+    for (const [name, entry] of serverEntries(claudeState?.mcpServers)) {
+        registrations.push(registration("claude", "user", name, entry));
+    }
+    const projects = isRecord(claudeState?.projects) ? claudeState.projects : {};
+    const projectState = projects[projectRoot];
+    if (isRecord(projectState)) {
+        for (const [name, entry] of serverEntries(projectState.mcpServers)) {
+            registrations.push(registration("claude", "local", name, entry));
+        }
+    }
+    const projectMcp = readJson(path.join(projectRoot, ".mcp.json"));
+    const approvals = claudeApprovals(projectRoot, homeDir);
+    for (const [name, entry] of serverEntries(projectMcp?.mcpServers)) {
+        registrations.push({
+            ...registration("claude", "project", name, entry, projectRoot),
+            approval: approvals.rejected.has(name)
+                ? "rejected"
+                : approvals.all || approvals.enabled.has(name)
+                    ? "approved"
+                    : "pending",
+        });
+    }
+    for (const [name, entry] of codexServerEntries(path.join(homeDir, ".codex", "config.toml"))) {
+        registrations.push(registration("codex", "user", name, entry));
+    }
+    for (const [name, entry] of codexServerEntries(path.join(projectRoot, ".codex", "config.toml"))) {
+        registrations.push(registration("codex", "project", name, entry, projectRoot));
+    }
+    return registrations.filter((item) => item.servedRoot !== null || isRagmirName(item.name));
+}
+export function mcpRegistrationWarnings(projectRoot, registrations) {
+    const label = (client) => client === "claude" ? "Claude Code" : "Codex";
+    return registrations.flatMap((item) => {
+        if (item.scope === "user") {
+            const served = item.servedRoot === null
+                ? "one knowledge base"
+                : item.servedRoot === projectRoot
+                    ? "this knowledge base"
+                    : `the knowledge base at ${item.servedRoot}`;
+            return [
+                `${label(item.client)} registers the Ragmir server "${item.name}" for every project (user scope), so agents in unrelated workspaces search ${served}. Register it per project (for example \`claude mcp add --scope project\`) or set mcpAllowedRoots in that base's config.`,
+            ];
+        }
+        if (item.approval === "pending") {
+            return [
+                `Claude Code has not approved the project MCP server "${item.name}" from .mcp.json, so it does not start in interactive sessions. Approve it when Claude Code asks, or add it to enabledMcpjsonServers in .claude/settings.local.json.`,
+            ];
+        }
+        if (item.approval === "rejected") {
+            return [
+                `Claude Code disabled the project MCP server "${item.name}" (disabledMcpjsonServers), so agents cannot call Ragmir tools in this project.`,
+            ];
+        }
+        return [];
+    });
+}
+function registration(client, scope, name, entry, projectRoot) {
+    return { client, scope, name, servedRoot: servedRoot(entry, projectRoot) };
+}
+function servedRoot(entry, projectRoot) {
+    const explicit = entry.env[RAGMIR_PROJECT_ROOT_ENV];
+    if (explicit) {
+        return path.resolve(explicit);
+    }
+    const flagIndex = entry.args.indexOf("--project-root");
+    const flagValue = flagIndex === -1 ? undefined : entry.args[flagIndex + 1];
+    if (flagValue) {
+        return path.resolve(projectRoot ?? "/", flagValue);
+    }
+    const commandLine = [entry.command, ...entry.args];
+    const runner = commandLine.find((part) => part.replaceAll("\\", "/").endsWith(".ragmir/run.cjs"));
+    if (runner) {
+        return path.dirname(path.dirname(path.resolve(projectRoot ?? "/", runner)));
+    }
+    const launchesRagmir = commandLine.some((part) => /serve-mcp|ragmir|(?:^|[\\/])rgr$/iu.test(part));
+    if (!launchesRagmir) {
+        return null;
+    }
+    // A wrapper script such as scripts/serve-mcp.sh lives inside the base it serves.
+    if (path.isAbsolute(entry.command)) {
+        const configured = configuredAncestor(path.dirname(entry.command));
+        if (configured) {
+            return configured;
+        }
+    }
+    return projectRoot ?? null;
+}
+function configuredAncestor(start) {
+    let current = start;
+    while (true) {
+        if (existsSync(path.join(current, CONFIG_PATH)) ||
+            existsSync(path.join(current, SHARED_CONFIG_FILENAME))) {
+            return current;
+        }
+        const parent = path.dirname(current);
+        if (parent === current) {
+            return null;
+        }
+        current = parent;
+    }
+}
+function isRagmirName(name) {
+    return /ragmir/iu.test(name);
+}
+function claudeApprovals(projectRoot, homeDir) {
+    const enabled = new Set();
+    const rejected = new Set();
+    let all = false;
+    for (const settingsPath of [
+        path.join(projectRoot, ".claude", "settings.local.json"),
+        path.join(projectRoot, ".claude", "settings.json"),
+        path.join(homeDir, ".claude", "settings.json"),
+    ]) {
+        const settings = readJson(settingsPath);
+        for (const name of stringArray(settings?.enabledMcpjsonServers))
+            enabled.add(name);
+        for (const name of stringArray(settings?.disabledMcpjsonServers))
+            rejected.add(name);
+        if (settings?.enableAllProjectMcpServers === true)
+            all = true;
+    }
+    return { enabled, rejected, all };
+}
+function serverEntries(value) {
+    if (!isRecord(value)) {
+        return [];
+    }
+    return Object.entries(value).flatMap(([name, entry]) => {
+        if (!isRecord(entry) || typeof entry.command !== "string") {
+            return [];
+        }
+        return [
+            [
+                name,
+                {
+                    command: entry.command,
+                    args: stringArray(entry.args),
+                    env: isRecord(entry.env)
+                        ? Object.fromEntries(Object.entries(entry.env).filter((pair) => typeof pair[1] === "string"))
+                        : {},
+                },
+            ],
+        ];
+    });
+}
+/**
+ * Minimal reader for `[mcp_servers.<name>]` tables: string `command`, string-array `args`, and the
+ * `[mcp_servers.<name>.env]` table. Enough to recognize Ragmir servers without a TOML dependency.
+ */
+function codexServerEntries(configPath) {
+    let content;
+    try {
+        content = readFileSync(configPath, "utf8");
+    }
+    catch {
+        return [];
+    }
+    const servers = new Map();
+    let current = null;
+    for (const rawLine of content.split(/\r?\n/u)) {
+        const line = rawLine.trim();
+        const header = /^\[mcp_servers\.("?)([^"\].]+)\1(\.env)?\]$/u.exec(line);
+        if (header) {
+            const name = header[2] ?? "";
+            if (!servers.has(name))
+                servers.set(name, { command: "", args: [], env: {} });
+            current = { name, table: header[3] ? "env" : "server" };
+            continue;
+        }
+        if (line.startsWith("[")) {
+            current = null;
+            continue;
+        }
+        const assignment = /^([A-Za-z0-9_-]+)\s*=\s*(.+)$/u.exec(line);
+        const server = current ? servers.get(current.name) : undefined;
+        if (!assignment || !server || !current) {
+            continue;
+        }
+        const [, key = "", value = ""] = assignment;
+        if (current.table === "env") {
+            const text = tomlString(value);
+            if (text !== null)
+                server.env[key] = text;
+        }
+        else if (key === "command") {
+            server.command = tomlString(value) ?? "";
+        }
+        else if (key === "args") {
+            server.args = tomlStringArray(value);
+        }
+    }
+    return [...servers.entries()].filter(([, entry]) => entry.command.length > 0);
+}
+function tomlString(value) {
+    const trimmed = value.trim();
+    if (trimmed.startsWith("'")) {
+        const end = trimmed.indexOf("'", 1);
+        return end === -1 ? null : trimmed.slice(1, end);
+    }
+    if (trimmed.startsWith('"')) {
+        try {
+            const match = /^"(?:[^"\\]|\\.)*"/u.exec(trimmed);
+            return match ? JSON.parse(match[0]) : null;
+        }
+        catch {
+            return null;
+        }
+    }
+    return null;
+}
+function tomlStringArray(value) {
+    const trimmed = value.trim();
+    if (!trimmed.startsWith("[")) {
+        return [];
+    }
+    return [...trimmed.matchAll(/"(?:[^"\\]|\\.)*"|'[^']*'/gu)].flatMap((match) => {
+        const text = tomlString(match[0]);
+        return text === null ? [] : [text];
+    });
+}
+function readJson(filePath) {
+    try {
+        const value = JSON.parse(readFileSync(filePath, "utf8"));
+        return isRecord(value) ? value : null;
+    }
+    catch {
+        return null;
+    }
+}
+function stringArray(value) {
+    return Array.isArray(value)
+        ? value.filter((item) => typeof item === "string")
+        : [];
+}
+//# sourceMappingURL=mcp-registrations.js.map

package/dist/mcp-registrations.js.map

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package/dist/mcp-scope.d.ts

@@ -0,0 +1,32 @@
+import type { Server } from "@modelcontextprotocol/sdk/server/index.js";
+import type { Config } from "./types.js";
+/** Working directory of the agent that launched the server, recorded by the runner and the CLI. */
+export declare const RAGMIR_CLIENT_CWD_ENV = "RAGMIR_CLIENT_CWD";
+export type WorkspaceRelation = "related" | "unrelated" | "unknown";
+export interface WorkspaceScopeVerdict {
+    relation: WorkspaceRelation;
+    /** `mcpAllowedRoots` is configured, so unrelated workspaces are refused instead of warned. */
+    enforced: boolean;
+    allowed: boolean;
+    workspaceRoots: string[];
+    source: "mcp-roots" | "client-environment" | "launch-directory" | null;
+}
+/**
+ * Track which workspace the connected agent works in: MCP roots when the client shares them (Claude
+ * Code), its CLAUDE_PROJECT_DIR otherwise, and the directory the agent launched the server from
+ * (Codex shares neither). A server registered for every project (user scope) would otherwise answer
+ * an unrelated project with this base's documents as if they were its own.
+ */
+export declare class WorkspaceScope {
+    private readonly server;
+    private roots;
+    private source;
+    private pending;
+    constructor(server: Server, env?: NodeJS.ProcessEnv);
+    attach(): void;
+    refresh(): void;
+    verdict(config: Config): Promise<WorkspaceScopeVerdict>;
+}
+export declare function workspaceScopeNotice(verdict: WorkspaceScopeVerdict, name: string, projectRoot: string): string | null;
+export declare function workspaceScopeRefusal(verdict: WorkspaceScopeVerdict, name: string, config: Config): string;
+//# sourceMappingURL=mcp-scope.d.ts.map

package/dist/mcp-scope.d.ts.map

@@ -0,0 +1 @@
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