@jcode.labs/ragmir 2.0.0

package/dist/mcp.js

@@ -0,0 +1,189 @@
+import { existsSync } from "node:fs";
+import path from "node:path";
+import { McpServer } from "@modelcontextprotocol/sdk/server/mcp.js";
+import { StdioServerTransport } from "@modelcontextprotocol/sdk/server/stdio.js";
+import { z } from "zod";
+import { accessLogUsageReport } from "./access-log.js";
+import { findProjectConfig, loadConfig } from "./config.js";
+import { RAGMIR_PROJECT_ROOT_ENV } from "./defaults.js";
+import { evaluateGoldenQueries } from "./evaluate.js";
+import { audit } from "./ingest.js";
+import { ask, search } from "./query.js";
+import { compactResearchReport, compactSearchResults, research } from "./research.js";
+import { securityAudit } from "./security.js";
+import { countRows } from "./store.js";
+import { VERSION } from "./version.js";
+const queryToolInputSchema = z.object({
+    query: z.string().min(1),
+    topK: z.number().int().positive().optional(),
+});
+const searchToolInputSchema = queryToolInputSchema.extend({
+    compact: z.boolean().optional(),
+});
+const researchToolInputSchema = queryToolInputSchema.extend({
+    includeCode: z.boolean().optional(),
+    compact: z.boolean().optional(),
+});
+const evaluateToolInputSchema = z.object({
+    goldenPath: z.string().min(1),
+    topK: z.number().int().positive().optional(),
+    failUnder: z.number().min(0).max(1).optional(),
+});
+const usageReportInputSchema = z.object({
+    days: z.number().int().positive().optional(),
+});
+export async function serveMcp(cwd = resolveMcpProjectRoot()) {
+    const server = new McpServer({
+        name: "ragmir",
+        version: VERSION,
+    });
+    server.registerTool("ragmir_status", {
+        title: "Ragmir Status",
+        description: "Show active Ragmir configuration and indexed chunk count.",
+        inputSchema: z.object({}),
+    }, async () => {
+        const config = await loadConfig(cwd);
+        const chunksIndexed = await countRows(config);
+        const output = {
+            projectRoot: config.projectRoot,
+            rawDir: config.rawDir,
+            storageDir: config.storageDir,
+            sourcesFile: config.sourcesFile,
+            embeddingProvider: config.embeddingProvider,
+            embeddingModel: config.embeddingModel,
+            embeddingModelPath: config.embeddingModelPath,
+            transformersAllowRemoteModels: config.transformersAllowRemoteModels,
+            llmGeneration: false,
+            redactionEnabled: config.redaction.enabled,
+            mcpMaxTopK: config.mcpMaxTopK,
+            maxFileBytes: config.maxFileBytes,
+            ingestConcurrency: config.ingestConcurrency,
+            embeddingBatchSize: config.embeddingBatchSize,
+            includeExtensions: config.includeExtensions,
+            pdfOcrCommand: config.pdfOcrCommand,
+            pdfOcrTimeoutMs: config.pdfOcrTimeoutMs,
+            imageOcrCommand: config.imageOcrCommand,
+            imageOcrTimeoutMs: config.imageOcrTimeoutMs,
+            legacyWordCommand: config.legacyWordCommand,
+            legacyWordTimeoutMs: config.legacyWordTimeoutMs,
+            chunksIndexed,
+        };
+        return textResult(output);
+    });
+    server.registerTool("ragmir_search", {
+        title: "Ragmir Search",
+        description: "Retrieve relevant passages from the local Ragmir knowledge base.",
+        inputSchema: searchToolInputSchema,
+    }, async ({ query, topK, compact }) => {
+        const results = await search(query, await searchOptions(cwd, topK));
+        return textResult(compact ? compactSearchResults(results) : results);
+    });
+    server.registerTool("ragmir_ask", {
+        title: "Ragmir Ask",
+        description: "Return cited retrieval context for a question without calling an LLM.",
+        inputSchema: queryToolInputSchema,
+    }, async ({ query, topK }) => textResult(await ask(query, await searchOptions(cwd, topK))));
+    server.registerTool("ragmir_research", {
+        title: "Ragmir Research",
+        description: "Run an audit-backed multi-query research pass with cited evidence and optional code matches.",
+        inputSchema: researchToolInputSchema,
+    }, async ({ query, topK, includeCode, compact }) => {
+        const options = await searchOptions(cwd, topK);
+        const researchOptions = { cwd };
+        addOption(researchOptions, "topK", options.topK);
+        addOption(researchOptions, "includeCode", includeCode);
+        const result = await research(query, researchOptions);
+        return textResult(compact ? compactResearchReport(result) : result);
+    });
+    server.registerTool("ragmir_audit", {
+        title: "Ragmir Audit",
+        description: "Compare supported source files on disk with the current vector index.",
+        inputSchema: z.object({}),
+    }, async () => textResult(await audit(cwd)));
+    server.registerTool("ragmir_evaluate", {
+        title: "Ragmir Evaluate",
+        description: "Measure retrieval recall against a local golden query file.",
+        inputSchema: evaluateToolInputSchema,
+    }, async ({ goldenPath, topK, failUnder }) => {
+        const result = await evaluateGoldenQueries(await evaluationOptions(cwd, goldenPath, topK));
+        if (failUnder === undefined) {
+            return textResult(result);
+        }
+        const minimumRecall = failUnder;
+        return textResult({
+            ...result,
+            minimumRecall,
+            passed: result.recall >= minimumRecall,
+        });
+    });
+    server.registerTool("ragmir_security_audit", {
+        title: "Ragmir Security Audit",
+        description: "Show local privacy, provider, redaction, MCP, and gitignore posture.",
+        inputSchema: z.object({}),
+    }, async () => textResult(await securityAudit(cwd)));
+    server.registerTool("ragmir_usage_report", {
+        title: "Ragmir Usage Report",
+        description: "Summarize the metadata-only local access log.",
+        inputSchema: usageReportInputSchema,
+    }, async ({ days }) => {
+        const options = { cwd };
+        if (days !== undefined) {
+            options.days = days;
+        }
+        return textResult(await accessLogUsageReport(options));
+    });
+    await server.connect(new StdioServerTransport());
+}
+export function resolveMcpProjectRoot(env = process.env, fallback = process.cwd()) {
+    const explicitRoot = env[RAGMIR_PROJECT_ROOT_ENV];
+    if (explicitRoot) {
+        return explicitRoot;
+    }
+    const fallbackConfig = findProjectConfig(fallback);
+    if (existsSync(fallbackConfig.configPath)) {
+        return fallbackConfig.projectRoot;
+    }
+    return env.CLAUDE_PROJECT_DIR ?? fallback;
+}
+function textResult(value) {
+    return {
+        content: [
+            {
+                type: "text",
+                text: JSON.stringify(value, null, 2),
+            },
+        ],
+    };
+}
+export async function searchOptions(cwd, topK) {
+    const config = await loadConfig(cwd);
+    const boundedTopK = Math.min(topK ?? config.topK, config.mcpMaxTopK);
+    return { cwd, topK: boundedTopK };
+}
+async function evaluationOptions(cwd, goldenPath, topK) {
+    const config = await loadConfig(cwd);
+    const result = {
+        cwd,
+        goldenPath: projectRelativeGoldenPath(cwd, goldenPath),
+        maxTopK: config.mcpMaxTopK,
+    };
+    if (topK === undefined) {
+        return result;
+    }
+    return { ...result, topK: Math.min(topK, config.mcpMaxTopK) };
+}
+export function projectRelativeGoldenPath(cwd, goldenPath) {
+    const root = path.resolve(cwd);
+    const absolutePath = path.resolve(root, goldenPath);
+    const relativePath = path.relative(root, absolutePath);
+    if (relativePath.length === 0 || relativePath.startsWith("..") || path.isAbsolute(relativePath)) {
+        throw new Error("ragmir_evaluate goldenPath must stay inside the MCP project root.");
+    }
+    return relativePath;
+}
+function addOption(target, key, value) {
+    if (value !== undefined) {
+        target[key] = value;
+    }
+}
+//# sourceMappingURL=mcp.js.map

package/dist/mcp.js.map

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package/dist/package-manager.d.ts

@@ -0,0 +1,11 @@
+export type PackageManager = "pnpm" | "npm" | "yarn" | "bun";
+export interface RagmirCommand {
+    packageManager: PackageManager;
+    command: string;
+    args: string[];
+    display: string;
+}
+export declare function detectPackageManager(cwd?: string): Promise<PackageManager>;
+export declare function ragmirCommand(cwd: string, args: string[]): Promise<RagmirCommand>;
+export declare const kbCommand: typeof ragmirCommand;
+//# sourceMappingURL=package-manager.d.ts.map

package/dist/package-manager.d.ts.map

@@ -0,0 +1 @@
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package/dist/package-manager.js

@@ -0,0 +1,93 @@
+import { existsSync } from "node:fs";
+import { readFile } from "node:fs/promises";
+import path from "node:path";
+const RAGMIR_CLI_BIN = "ragmir";
+export async function detectPackageManager(cwd = process.cwd()) {
+    const root = path.resolve(cwd);
+    const packageManager = await packageJsonManager(root);
+    if (packageManager) {
+        return packageManager;
+    }
+    if (existsSync(path.join(root, "pnpm-lock.yaml"))) {
+        return "pnpm";
+    }
+    if (existsSync(path.join(root, "package-lock.json")) ||
+        existsSync(path.join(root, "npm-shrinkwrap.json"))) {
+        return "npm";
+    }
+    if (existsSync(path.join(root, "yarn.lock"))) {
+        return "yarn";
+    }
+    if (existsSync(path.join(root, "bun.lock")) || existsSync(path.join(root, "bun.lockb"))) {
+        return "bun";
+    }
+    return "pnpm";
+}
+export async function ragmirCommand(cwd, args) {
+    const packageManager = await detectPackageManager(cwd);
+    const commandArgs = commandArgsFor(packageManager, args);
+    return {
+        packageManager,
+        command: commandArgs.command,
+        args: commandArgs.args,
+        display: displayCommand(packageManager, args),
+    };
+}
+export const kbCommand = ragmirCommand;
+async function packageJsonManager(root) {
+    const packageJsonPath = path.join(root, "package.json");
+    if (!existsSync(packageJsonPath)) {
+        return null;
+    }
+    try {
+        const packageJson = JSON.parse(await readFile(packageJsonPath, "utf8"));
+        if (typeof packageJson.packageManager !== "string") {
+            return null;
+        }
+        if (packageJson.packageManager.startsWith("pnpm@")) {
+            return "pnpm";
+        }
+        if (packageJson.packageManager.startsWith("npm@")) {
+            return "npm";
+        }
+        if (packageJson.packageManager.startsWith("yarn@")) {
+            return "yarn";
+        }
+        if (packageJson.packageManager.startsWith("bun@")) {
+            return "bun";
+        }
+    }
+    catch {
+        return null;
+    }
+    return null;
+}
+function commandArgsFor(packageManager, args) {
+    switch (packageManager) {
+        case "npm":
+            return { command: "npx", args: [RAGMIR_CLI_BIN, ...args] };
+        case "yarn":
+            return { command: "yarn", args: ["exec", RAGMIR_CLI_BIN, ...args] };
+        case "bun":
+            return { command: "bunx", args: [RAGMIR_CLI_BIN, ...args] };
+        case "pnpm":
+            return { command: "pnpm", args: ["exec", RAGMIR_CLI_BIN, ...args] };
+    }
+}
+function displayCommand(packageManager, args) {
+    const suffix = args.map(formatArg).join(" ");
+    switch (packageManager) {
+        case "npm":
+            return `npx ${RAGMIR_CLI_BIN}${suffix ? ` ${suffix}` : ""}`;
+        case "yarn":
+            return `yarn exec ${RAGMIR_CLI_BIN}${suffix ? ` ${suffix}` : ""}`;
+        case "bun":
+            return `bunx ${RAGMIR_CLI_BIN}${suffix ? ` ${suffix}` : ""}`;
+        case "pnpm":
+            return `pnpm exec ${RAGMIR_CLI_BIN}${suffix ? ` ${suffix}` : ""}`;
+    }
+}
+function formatArg(arg) {
+    return /\s/.test(arg) ? JSON.stringify(arg) : arg;
+}
+//# sourceMappingURL=package-manager.js.map

package/dist/package-manager.js.map

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package/dist/parsing.d.ts

@@ -0,0 +1,12 @@
+import type { ParsedDocument, SourceFile } from "./types.js";
+export interface ParseFileOptions {
+    projectRoot?: string;
+    pdfOcrCommand?: string[];
+    pdfOcrTimeoutMs?: number;
+    imageOcrCommand?: string[];
+    imageOcrTimeoutMs?: number;
+    legacyWordCommand?: string[];
+    legacyWordTimeoutMs?: number;
+}
+export declare function parseFile(file: SourceFile, options?: ParseFileOptions): Promise<ParsedDocument>;
+//# sourceMappingURL=parsing.d.ts.map

package/dist/parsing.d.ts.map

@@ -0,0 +1 @@
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package/dist/parsing.js

@@ -0,0 +1,307 @@
+import { createRequire as _createRequire } from "module";
+const __require = _createRequire(import.meta.url);
+import { spawn } from "node:child_process";
+import { readFile } from "node:fs/promises";
+import { strFromU8, unzipSync } from "fflate";
+import { htmlToText } from "html-to-text";
+import readExcelFile from "read-excel-file/node";
+const mammoth = __require("mammoth");
+import { extractText, getDocumentProxy } from "unpdf";
+import YAML from "yaml";
+import { OCR_IMAGE_EXTENSIONS } from "./files.js";
+const MAX_OFFICE_XML_ENTRY_BYTES = 25_000_000;
+const MAX_EXTERNAL_TEXT_STDIO_BYTES = 25_000_000;
+const LONG_BASE64_TEXT_PATTERN = /\b[A-Za-z0-9+/]{240,}={0,2}\b/gu;
+const HTML_TO_TEXT_OPTIONS = {
+    wordwrap: false,
+    selectors: [
+        { selector: "a", options: { ignoreHref: true } },
+        { selector: "img", format: "skip" },
+    ],
+};
+export async function parseFile(file, options = {}) {
+    let text;
+    switch (file.extension) {
+        case ".pdf":
+            text = await parsePdf(file.absolutePath, options);
+            break;
+        case ".doc":
+            text = await parseLegacyWord(file.absolutePath, options);
+            break;
+        case ".docx":
+            text = await parseDocx(file.absolutePath);
+            break;
+        case ".pptx":
+            text = await parsePptx(file.absolutePath);
+            break;
+        case ".xlsx":
+            text = await parseXlsx(file.absolutePath);
+            break;
+        case ".avif":
+        case ".bmp":
+        case ".gif":
+        case ".heic":
+        case ".heif":
+        case ".jpeg":
+        case ".jpg":
+        case ".png":
+        case ".tif":
+        case ".tiff":
+        case ".webp":
+            text = await parseImage(file.absolutePath, file.extension, options);
+            break;
+        case ".odt":
+        case ".ods":
+        case ".odp":
+            text = await parseOpenDocument(file.absolutePath);
+            break;
+        case ".epub":
+            text = await parseEpub(file.absolutePath);
+            break;
+        case ".html":
+        case ".htm":
+            text = htmlToText(await readFile(file.absolutePath, "utf8"), HTML_TO_TEXT_OPTIONS);
+            break;
+        case ".json":
+        case ".ipynb":
+            text = JSON.stringify(JSON.parse(await readFile(file.absolutePath, "utf8")), null, 2);
+            break;
+        case ".yaml":
+        case ".yml":
+            text = YAML.stringify(YAML.parse(await readFile(file.absolutePath, "utf8")));
+            break;
+        case ".rtf":
+            text = stripRtf(await readFile(file.absolutePath, "utf8"));
+            break;
+        default:
+            text = await readFile(file.absolutePath, "utf8");
+    }
+    return { file, text: normalizeText(text) };
+}
+async function parseDocx(filePath) {
+    const result = await mammoth.extractRawText({ path: filePath });
+    return result.value;
+}
+async function parsePptx(filePath) {
+    const entries = unzipOfficeFile(await readFile(filePath));
+    return xmlEntriesToText(entries, [
+        /^ppt\/slides\/slide\d+\.xml$/u,
+        /^ppt\/notesSlides\/notesSlide\d+\.xml$/u,
+    ]);
+}
+async function parseXlsx(filePath) {
+    const workbook = await readExcelFile(filePath, { trim: false });
+    const sheets = [];
+    for (const sheet of workbook) {
+        const rows = sheet.data.map(spreadsheetRowToText).filter((row) => row.some(Boolean));
+        if (rows.length > 0) {
+            sheets.push(`# ${sheet.sheet}`, rows.map((row) => row.join("\t")).join("\n"));
+        }
+    }
+    return sheets.join("\n\n");
+}
+async function parseImage(filePath, extension, options) {
+    if (!OCR_IMAGE_EXTENSIONS.has(extension)) {
+        return "";
+    }
+    if (!options.imageOcrCommand || options.imageOcrCommand.length === 0) {
+        return "";
+    }
+    return runExternalTextCommand(filePath, {
+        command: options.imageOcrCommand,
+        cwd: options.projectRoot,
+        label: "OCR command",
+        timeoutMs: options.imageOcrTimeoutMs ?? 120_000,
+        pathEnvName: "RAGMIR_IMAGE_PATH",
+    });
+}
+async function parseLegacyWord(filePath, options) {
+    if (!options.legacyWordCommand || options.legacyWordCommand.length === 0) {
+        return "";
+    }
+    return runExternalTextCommand(filePath, {
+        command: options.legacyWordCommand,
+        cwd: options.projectRoot,
+        label: "legacy Word command",
+        timeoutMs: options.legacyWordTimeoutMs ?? 120_000,
+        pathEnvName: "RAGMIR_LEGACY_WORD_PATH",
+    });
+}
+async function parseOpenDocument(filePath) {
+    const entries = unzipOfficeFile(await readFile(filePath));
+    return xmlEntriesToText(entries, [/^content\.xml$/u, /^meta\.xml$/u]);
+}
+async function parseEpub(filePath) {
+    const entries = unzipOfficeFile(await readFile(filePath));
+    const parts = [];
+    for (const [name, content] of [...entries.entries()].sort(([a], [b]) => a.localeCompare(b))) {
+        if (!/\.(?:xhtml|html|htm|xml)$/iu.test(name)) {
+            continue;
+        }
+        const text = htmlToText(content, HTML_TO_TEXT_OPTIONS);
+        if (text.trim()) {
+            parts.push(text);
+        }
+    }
+    return parts.join("\n\n");
+}
+function unzipOfficeFile(buffer) {
+    const unzipped = unzipSync(new Uint8Array(buffer), {
+        filter: (file) => file.originalSize <= MAX_OFFICE_XML_ENTRY_BYTES,
+    });
+    const entries = new Map();
+    for (const [name, content] of Object.entries(unzipped)) {
+        if (/\.(?:xml|rels|xhtml|html|htm)$/iu.test(name)) {
+            entries.set(name, strFromU8(content));
+        }
+    }
+    return entries;
+}
+function xmlEntriesToText(entries, patterns) {
+    const parts = [];
+    for (const [name, xml] of [...entries.entries()].sort(([a], [b]) => a.localeCompare(b))) {
+        if (patterns.some((pattern) => pattern.test(name))) {
+            const text = xmlToText(xml);
+            if (text) {
+                parts.push(text);
+            }
+        }
+    }
+    return parts.join("\n\n");
+}
+function trimTrailingEmptyValues(values) {
+    let end = values.length;
+    while (end > 0 && values[end - 1] === "") {
+        end -= 1;
+    }
+    return values.slice(0, end);
+}
+function spreadsheetRowToText(row) {
+    return trimTrailingEmptyValues(row.map(spreadsheetCellToText));
+}
+function spreadsheetCellToText(value) {
+    if (value === null || value === undefined) {
+        return "";
+    }
+    if (typeof value === "string" || typeof value === "number" || typeof value === "boolean") {
+        return String(value);
+    }
+    if (value instanceof Date) {
+        return value.toISOString();
+    }
+    return JSON.stringify(value);
+}
+function xmlToText(xml) {
+    return normalizeText(decodeXmlEntities(xml
+        .replace(/<w:tab\/>/gu, " ")
+        .replace(/<w:br\/>/gu, "\n")
+        .replace(/<\/(?:w:p|a:p|text:p|text:h|table:table-row)>/gu, "\n")
+        .replace(/<[^>]+>/gu, " ")
+        .replace(/[ \t]{2,}/gu, " ")));
+}
+function stripRtf(input) {
+    return input
+        .replace(/\\par[d]?/gu, "\n")
+        .replace(/\\'[0-9a-fA-F]{2}/gu, " ")
+        .replace(/\\[a-zA-Z]+-?\d* ?/gu, " ")
+        .replace(/[{}]/gu, " ");
+}
+function decodeXmlEntities(input) {
+    return input
+        .replace(/&lt;/gu, "<")
+        .replace(/&gt;/gu, ">")
+        .replace(/&quot;/gu, '"')
+        .replace(/&apos;/gu, "'")
+        .replace(/&amp;/gu, "&");
+}
+async function parsePdf(filePath, options) {
+    const buffer = await readFile(filePath);
+    const pdf = await getDocumentProxy(new Uint8Array(buffer));
+    const result = await extractText(pdf, { mergePages: true });
+    if (normalizeText(result.text)) {
+        return result.text;
+    }
+    if (!options.pdfOcrCommand || options.pdfOcrCommand.length === 0) {
+        return result.text;
+    }
+    return runExternalTextCommand(filePath, {
+        command: options.pdfOcrCommand,
+        cwd: options.projectRoot,
+        label: "OCR command",
+        timeoutMs: options.pdfOcrTimeoutMs ?? 120_000,
+        pathEnvName: "RAGMIR_PDF_PATH",
+    });
+}
+async function runExternalTextCommand(filePath, options) {
+    const command = options.command ?? [];
+    const [executable, ...configuredArgs] = command;
+    if (!executable) {
+        return "";
+    }
+    const hasInputPlaceholder = command.some((part) => part.includes("{input}"));
+    const args = configuredArgs.map((part) => part.replaceAll("{input}", filePath));
+    if (!hasInputPlaceholder) {
+        args.push(filePath);
+    }
+    return new Promise((resolve, reject) => {
+        const child = spawn(executable, args, {
+            cwd: options.cwd,
+            env: { ...process.env, [options.pathEnvName]: filePath },
+            stdio: ["ignore", "pipe", "pipe"],
+        });
+        let stdout = "";
+        let stderr = "";
+        let didTimeout = false;
+        let outputTooLarge = false;
+        const timeout = setTimeout(() => {
+            didTimeout = true;
+            child.kill("SIGTERM");
+        }, options.timeoutMs);
+        child.stdout.setEncoding("utf8");
+        child.stderr.setEncoding("utf8");
+        child.stdout.on("data", (chunk) => {
+            stdout += chunk;
+            if (Buffer.byteLength(stdout, "utf8") > MAX_EXTERNAL_TEXT_STDIO_BYTES) {
+                outputTooLarge = true;
+                child.kill("SIGTERM");
+            }
+        });
+        child.stderr.on("data", (chunk) => {
+            stderr += chunk;
+            if (Buffer.byteLength(stderr, "utf8") > MAX_EXTERNAL_TEXT_STDIO_BYTES) {
+                outputTooLarge = true;
+                child.kill("SIGTERM");
+            }
+        });
+        child.on("error", (error) => {
+            clearTimeout(timeout);
+            reject(new Error(`${options.label} failed to start: ${error.message}`));
+        });
+        child.on("close", (code) => {
+            clearTimeout(timeout);
+            if (didTimeout) {
+                reject(new Error(`${options.label} timed out.`));
+                return;
+            }
+            if (outputTooLarge) {
+                reject(new Error(`${options.label} produced too much output.`));
+                return;
+            }
+            if (code !== 0) {
+                const detail = stderr.trim();
+                reject(new Error(detail ? `${options.label} failed: ${detail}` : `${options.label} failed.`));
+                return;
+            }
+            resolve(stdout);
+        });
+    });
+}
+function normalizeText(input) {
+    return input
+        .replace(LONG_BASE64_TEXT_PATTERN, " ")
+        .replace(/\r\n/g, "\n")
+        .replace(/[ \t]+\n/g, "\n")
+        .replace(/\n{4,}/g, "\n\n\n")
+        .trim();
+}
+//# sourceMappingURL=parsing.js.map

package/dist/parsing.js.map

@@ -0,0 +1 @@
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