@jbrowse/react-app2 3.2.0

package/esm/createViewState.js

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+import { onPatch } from 'mobx-state-tree';
+import createModel from './createModel';
+export default function createViewState(opts) {
+    const { config, plugins = [], onChange, makeWorkerInstance } = opts;
+    const { defaultSession = { name: 'NewSession' } } = config;
+    const { model, pluginManager } = createModel(plugins, makeWorkerInstance);
+    const stateTree = model.create({
+        jbrowse: config,
+        session: defaultSession,
+    }, { pluginManager });
+    pluginManager.setRootModel(stateTree);
+    pluginManager.configure();
+    if (onChange) {
+        onPatch(stateTree, onChange);
+    }
+    return stateTree;
+}

package/esm/index.d.ts

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+export { default as JBrowseApp } from './JBrowseApp';
+export { default as createModel } from './createModel';
+export { default as createViewState } from './createViewState';
+export { default as loadPlugins } from './loadPlugins';

package/esm/index.js

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+export { default as JBrowseApp } from './JBrowseApp';
+export { default as createModel } from './createModel';
+export { default as createViewState } from './createViewState';
+export { default as loadPlugins } from './loadPlugins';

package/esm/jbrowseModel.d.ts

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+import type PluginManager from '@jbrowse/core/PluginManager';
+import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
+export default function JBrowseWeb({ pluginManager, assemblyConfigSchema, }: {
+    pluginManager: PluginManager;
+    assemblyConfigSchema: AnyConfigurationSchemaType;
+}): import("mobx-state-tree").IModelType<{
+    configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+        rpc: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+            defaultDriver: {
+                type: string;
+                description: string;
+                defaultValue: string;
+            };
+            drivers: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IMapType<import("mobx-state-tree").ITypeUnion<import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<Record<string, any>>> | undefined, import("mobx-state-tree").ModelSnapshotType<Record<string, any>>, ({} & Partial<import("mobx-state-tree/dist/internal").ExtractCFromProps<Record<string, any>>> & import("mobx-state-tree/dist/internal").NonEmptyObject) | undefined>>, [undefined]>;
+        }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
+        highResolutionScaling: {
+            type: string;
+            defaultValue: number;
+        };
+        formatDetails: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+            feature: {
+                type: string;
+                description: string;
+                defaultValue: {};
+                contextVariable: string[];
+            };
+            subfeatures: {
+                type: string;
+                description: string;
+                defaultValue: {};
+                contextVariable: string[];
+            };
+            depth: {
+                type: string;
+                defaultValue: number;
+                description: string;
+            };
+            maxDepth: {
+                type: string;
+                defaultValue: number;
+                description: string;
+            };
+        }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
+        formatAbout: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+            config: {
+                type: string;
+                description: string;
+                defaultValue: {};
+                contextVariable: string[];
+            };
+            hideUris: {
+                type: string;
+                defaultValue: boolean;
+            };
+        }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
+        shareURL: {
+            type: string;
+            defaultValue: string;
+        };
+        disableAnalytics: {
+            type: string;
+            defaultValue: boolean;
+        };
+        hierarchical: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+            sort: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+                trackNames: {
+                    type: string;
+                    defaultValue: boolean;
+                };
+                categories: {
+                    type: string;
+                    defaultValue: boolean;
+                };
+            }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
+            defaultCollapsed: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+                categoryNames: {
+                    type: string;
+                    defaultValue: never[];
+                };
+                topLevelCategories: {
+                    type: string;
+                    defaultValue: boolean;
+                };
+                subCategories: {
+                    type: string;
+                    defaultValue: boolean;
+                };
+            }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
+        }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
+        theme: {
+            type: string;
+            defaultValue: {};
+        };
+        extraThemes: {
+            type: string;
+            defaultValue: {};
+        };
+        logoPath: {
+            type: string;
+            defaultValue: {
+                uri: string;
+                locationType: string;
+            };
+        };
+    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
+    plugins: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IType<import("@jbrowse/core/PluginLoader").PluginDefinition, import("@jbrowse/core/PluginLoader").PluginDefinition, import("@jbrowse/core/PluginLoader").PluginDefinition>>;
+    assemblies: import("mobx-state-tree").IArrayType<AnyConfigurationSchemaType>;
+    tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
+    internetAccounts: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
+    aggregateTextSearchAdapters: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
+    connections: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
+    defaultSession: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IType<any, any, any>, [undefined]>;
+    preConfiguredSessions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IType<any, any, any>>;
+}, {
+    readonly assemblyNames: string[];
+    readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
+} & {
+    addAssemblyConf(conf: import("@jbrowse/core/configuration").AnyConfigurationModel): ({
+        [x: string]: any;
+    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
+        setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
+            [x: string]: any;
+        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
+            setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
+                [x: string]: any;
+            } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
+        } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
+    } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>) | undefined;
+    removeAssemblyConf(assemblyName: string): void;
+    addTrackConf(trackConf: import("@jbrowse/core/configuration").AnyConfigurationModel): any;
+    addConnectionConf(connectionConf: import("@jbrowse/core/configuration").AnyConfigurationModel): any;
+    deleteConnectionConf(configuration: import("@jbrowse/core/configuration").AnyConfigurationModel): boolean;
+    deleteTrackConf(trackConf: import("@jbrowse/core/configuration").AnyConfigurationModel): boolean;
+    addPlugin(pluginDefinition: import("@jbrowse/core/PluginLoader").PluginDefinition): void;
+    removePlugin(pluginDefinition: import("@jbrowse/core/PluginLoader").PluginDefinition): void;
+    setDefaultSessionConf(sessionConf: import("@jbrowse/core/configuration").AnyConfigurationModel): void;
+    addInternetAccountConf(internetAccountConf: import("@jbrowse/core/configuration").AnyConfigurationModel): any;
+    deleteInternetAccountConf(configuration: import("@jbrowse/core/configuration").AnyConfigurationModel): boolean;
+}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;

package/esm/jbrowseModel.js

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+import { JBrowseModelF } from '@jbrowse/app-core';
+export default function JBrowseWeb({ pluginManager, assemblyConfigSchema, }) {
+    return JBrowseModelF({ pluginManager, assemblyConfigSchema });
+}

package/esm/loadPlugins.d.ts

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+import type { LoadedPlugin } from '@jbrowse/core/PluginLoader';
+interface PluginDefinition {
+    name: string;
+    url: string;
+}
+export default function loadPlugins(pluginDefinitions: PluginDefinition[], args?: {
+    fetchESM: (url: string) => Promise<LoadedPlugin>;
+}): Promise<{
+    plugin: import("@jbrowse/core/Plugin").PluginConstructor;
+    definition: import("@jbrowse/core/PluginLoader").PluginDefinition;
+}[]>;
+export {};

package/esm/loadPlugins.js

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+import PluginLoader from '@jbrowse/core/PluginLoader';
+export default async function loadPlugins(pluginDefinitions, args) {
+    const pluginLoader = new PluginLoader(pluginDefinitions, args);
+    pluginLoader.installGlobalReExports(window);
+    return pluginLoader.load('');
+}

package/esm/makeWorkerInstance.d.ts

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+export default function makeWorkerInstance(): Worker;

package/esm/makeWorkerInstance.js

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+export default function makeWorkerInstance() {
+    return new Worker(new URL('./rpcWorker', import.meta.url));
+}