@jbrowse/plugin-wiggle 2.6.3 → 2.7.1

package/dist/CreateMultiWiggleExtension/index.js

@@ -48,17 +48,20 @@ function default_1(pm) {
                                 ];
                                 const now = +Date.now();
                                 const trackId = `multitrack-${now}-sessionTrack`;
-                                (0, util_1.getSession)(model).addTrackConf({
-                                    type: 'MultiQuantitativeTrack',
-                                    trackId,
-                                    name: arg.name,
-                                    assemblyNames,
-                                    adapter: {
-                                        type: 'MultiWiggleAdapter',
-                                        subadapters,
-                                    },
-                                });
-                                model.view.showTrack(trackId);
+                                const session = (0, util_1.getSession)(model);
+                                if ((0, util_1.isSessionWithAddTracks)(session)) {
+                                    session.addTrackConf({
+                                        type: 'MultiQuantitativeTrack',
+                                        trackId,
+                                        name: arg.name,
+                                        assemblyNames,
+                                        adapter: {
+                                            type: 'MultiWiggleAdapter',
+                                            subadapters,
+                                        },
+                                    });
+                                    model.view.showTrack(trackId);
+                                }
                             }
                             (0, util_1.getSession)(model).queueDialog(handleClose => [
                                 ConfirmDialog,

package/dist/DensityRenderer/DensityRenderer.js

@@ -3,11 +3,11 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-const drawxy_1 = require("../drawxy");
+const drawDensity_1 = require("../drawDensity");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
 class DensityRenderer extends WiggleBaseRenderer_1.default {
     async draw(ctx, props) {
-        return (0, drawxy_1.drawDensity)(ctx, props);
+        return (0, drawDensity_1.drawDensity)(ctx, props);
     }
 }
 exports.default = DensityRenderer;

package/dist/LinePlotRenderer/LinePlotRenderer.js

@@ -5,10 +5,10 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
 const util_1 = require("../util");
-const drawxy_1 = require("../drawxy");
+const drawLine_1 = require("../drawLine");
 class LinePlotRenderer extends WiggleBaseRenderer_1.default {
     async draw(ctx, props) {
-        return (0, drawxy_1.drawLine)(ctx, {
+        return (0, drawLine_1.drawLine)(ctx, {
             ...props,
             offset: util_1.YSCALEBAR_LABEL_OFFSET,
             colorCallback: () => 'grey',

package/dist/LinearWiggleDisplay/components/SetColorDialog.d.ts

@@ -1,14 +1,13 @@
 import React from 'react';
-declare function SetColorDialog({ model, handleClose, }: {
+declare const SetColorDialog: ({ model, handleClose, }: {
     model: {
-        color?: string;
-        posColor?: string;
-        negColor?: string;
+        color?: string | undefined;
+        posColor?: string | undefined;
+        negColor?: string | undefined;
         setColor: (arg?: string) => void;
         setPosColor: (arg?: string) => void;
         setNegColor: (arg?: string) => void;
     };
     handleClose: () => void;
-}): React.JSX.Element;
-declare const _default: typeof SetColorDialog;
-export default _default;
+}) => React.JSX.Element;
+export default SetColorDialog;

package/dist/LinearWiggleDisplay/components/SetColorDialog.js

@@ -28,7 +28,7 @@ const mobx_react_1 = require("mobx-react");
 const material_1 = require("@mui/material");
 const ui_1 = require("@jbrowse/core/ui");
 const ColorPicker_1 = require("@jbrowse/core/ui/ColorPicker");
-function SetColorDialog({ model, handleClose, }) {
+const SetColorDialog = (0, mobx_react_1.observer)(function SetColorDialog({ model, handleClose, }) {
     const [posneg, setPosNeg] = (0, react_1.useState)(false);
     return (react_1.default.createElement(ui_1.Dialog, { open: true, onClose: handleClose, title: "Set color" },
         react_1.default.createElement(material_1.DialogContent, null,
@@ -55,5 +55,5 @@ function SetColorDialog({ model, handleClose, }) {
                     model.setColor(undefined);
                 }, color: "secondary", variant: "contained" }, "Restore default"),
             react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", type: "submit", onClick: () => handleClose() }, "Submit"))));
-}
-exports.default = (0, mobx_react_1.observer)(SetColorDialog);
+});
+exports.default = SetColorDialog;

package/dist/LinearWiggleDisplay/components/Tooltip.js

@@ -10,7 +10,7 @@ const mobx_react_1 = require("mobx-react");
 const Tooltip_1 = __importDefault(require("../../Tooltip"));
 const util_1 = require("../../util");
 const en = (n) => n.toLocaleString('en-US');
-const TooltipContents = react_1.default.forwardRef(function ({ feature }, ref) {
+const TooltipContents = react_1.default.forwardRef(function TooltipContents2({ feature }, ref) {
     const start = feature.get('start');
     const end = feature.get('end');
     const name = feature.get('refName');

package/dist/MultiDensityRenderer/MultiDensityRenderer.js

@@ -5,23 +5,20 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 const util_1 = require("@jbrowse/core/util");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
-const drawxy_1 = require("../drawxy");
+const drawDensity_1 = require("../drawDensity");
 class MultiXYPlotRenderer extends WiggleBaseRenderer_1.default {
     // @ts-expect-error
     async draw(ctx, props) {
         const { bpPerPx, sources, regions, features } = props;
         const [region] = regions;
-        const groups = (0, util_1.groupBy)([...features.values()], f => f.get('source'));
+        const groups = (0, util_1.groupBy)(features.values(), f => f.get('source'));
         const height = props.height / sources.length;
         const width = (region.end - region.start) / bpPerPx;
         let feats = [];
         ctx.save();
         sources.forEach(source => {
-            const features = groups[source.name];
-            if (!features) {
-                return;
-            }
-            const { reducedFeatures } = (0, drawxy_1.drawDensity)(ctx, {
+            const features = groups[source.name] || [];
+            const { reducedFeatures } = (0, drawDensity_1.drawDensity)(ctx, {
                 ...props,
                 features,
                 height,
@@ -32,7 +29,7 @@ class MultiXYPlotRenderer extends WiggleBaseRenderer_1.default {
             ctx.lineTo(width, height);
             ctx.stroke();
             ctx.translate(0, height);
-            feats = [...feats, ...reducedFeatures];
+            feats = feats.concat(reducedFeatures);
         });
         ctx.restore();
         return { reducedFeatures: feats };

package/dist/MultiLineRenderer/MultiLineRenderer.js

@@ -4,25 +4,21 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 const util_1 = require("@jbrowse/core/util");
-const drawxy_1 = require("../drawxy");
+const drawLine_1 = require("../drawLine");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
 class MultiLineRenderer extends WiggleBaseRenderer_1.default {
     // @ts-expect-error
     async draw(ctx, props) {
         const { sources, features } = props;
-        const groups = (0, util_1.groupBy)([...features.values()], f => f.get('source'));
+        const groups = (0, util_1.groupBy)(features.values(), f => f.get('source'));
         let feats = [];
         sources.forEach(source => {
-            const features = groups[source.name];
-            if (!features) {
-                return;
-            }
-            const { reducedFeatures } = (0, drawxy_1.drawLine)(ctx, {
+            const { reducedFeatures } = (0, drawLine_1.drawLine)(ctx, {
                 ...props,
-                features,
+                features: groups[source.name] || [],
                 colorCallback: () => source.color || 'blue',
             });
-            feats = [...feats, ...reducedFeatures];
+            feats = feats.concat(reducedFeatures);
         });
         return { reducedFeatures: feats };
     }

package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts

@@ -1,7 +1,6 @@
 import React from 'react';
 import { DialogProps } from '@mui/material';
-declare function DraggableDialog(props: DialogProps & {
+declare const DraggableDialog: (props: DialogProps & {
     title: string;
-}): React.JSX.Element;
-declare const _default: typeof DraggableDialog;
-export default _default;
+}) => React.JSX.Element;
+export default DraggableDialog;

package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.js

@@ -23,7 +23,7 @@ function PaperComponent(props) {
     return (react_1.default.createElement(react_draggable_1.default, { handle: "#draggable-dialog-title", cancel: '[class*="MuiDialogContent-root"]' },
         react_1.default.createElement(material_1.Paper, { ...props })));
 }
-function DraggableDialog(props) {
+const DraggableDialog = (0, mobx_react_1.observer)(function DraggableDialog(props) {
     const { classes } = useStyles();
     const { title, children, onClose } = props;
     return (react_1.default.createElement(material_1.Dialog, { ...props, PaperComponent: PaperComponent, "aria-labelledby": "draggable-dialog-title" // this area is important for the draggable functionality
@@ -38,5 +38,5 @@ function DraggableDialog(props) {
                     react_1.default.createElement(Close_1.default, null))) : null),
             react_1.default.createElement(material_1.Divider, null),
             children)));
-}
-exports.default = (0, mobx_react_1.observer)(DraggableDialog);
+});
+exports.default = DraggableDialog;

package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js

@@ -30,18 +30,10 @@ const react_1 = __importStar(require("react"));
 const material_1 = require("@mui/material");
 const mui_1 = require("tss-react/mui");
 const util_1 = require("@jbrowse/core/util");
-const x_data_grid_1 = require("@mui/x-data-grid");
 const clone_1 = __importDefault(require("clone"));
 // locals
 const DraggableDialog_1 = __importDefault(require("./DraggableDialog"));
-const ColorPicker_1 = __importStar(require("@jbrowse/core/ui/ColorPicker"));
-const util_2 = require("./util");
-// icons
-const KeyboardDoubleArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowUp"));
-const KeyboardDoubleArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowDown"));
-const KeyboardArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardArrowDown"));
-const KeyboardArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardArrowUp"));
-const UriLink_1 = __importDefault(require("@jbrowse/core/BaseFeatureWidget/BaseFeatureDetail/UriLink"));
+const SourcesGrid_1 = __importDefault(require("./SourcesGrid"));
 const useStyles = (0, mui_1.makeStyles)()({
     content: {
         minWidth: 800,
@@ -66,7 +58,7 @@ function SetColorDialog({ model, handleClose, }) {
                     react_1.default.createElement("li", null, "Changes are applied when you hit Submit"),
                     react_1.default.createElement("li", null, "You can click and drag the dialog box to move it on the screen"),
                     react_1.default.createElement("li", null, "Columns in the table can be hidden using a vertical '...' menu on the right side of each column")))) : null,
-            react_1.default.createElement(SourcesGrid, { rows: currLayout, onChange: setCurrLayout, showTips: showTips })),
+            react_1.default.createElement(SourcesGrid_1.default, { rows: currLayout, onChange: setCurrLayout, showTips: showTips })),
         react_1.default.createElement(material_1.DialogActions, null,
             react_1.default.createElement(material_1.Button, { variant: "contained", type: "submit", color: "inherit", onClick: () => {
                     model.clearLayout();
@@ -82,89 +74,3 @@ function SetColorDialog({ model, handleClose, }) {
                 } }, "Submit"))));
 }
 exports.default = SetColorDialog;
-function SourcesGrid({ rows, onChange, showTips, }) {
-    const [anchorEl, setAnchorEl] = (0, react_1.useState)(null);
-    const [selected, setSelected] = (0, react_1.useState)([]);
-    // @ts-expect-error
-    const { name: _name, color: _color, baseUri: _baseUri, ...rest } = rows[0];
-    const [widgetColor, setWidgetColor] = (0, react_1.useState)('blue');
-    const [currSort, setCurrSort] = (0, react_1.useState)({
-        idx: 0,
-        field: null,
-    });
-    return (react_1.default.createElement("div", null,
-        react_1.default.createElement(material_1.Button, { disabled: !selected.length, onClick: event => setAnchorEl(event.currentTarget) }, "Change color of selected items"),
-        react_1.default.createElement(material_1.Button, { onClick: () => onChange((0, util_2.moveUp)([...rows], selected)), disabled: !selected.length },
-            react_1.default.createElement(KeyboardArrowUp_1.default, null),
-            showTips ? 'Move selected items up' : null),
-        react_1.default.createElement(material_1.Button, { onClick: () => onChange((0, util_2.moveDown)([...rows], selected)), disabled: !selected.length },
-            react_1.default.createElement(KeyboardArrowDown_1.default, null),
-            showTips ? 'Move selected items down' : null),
-        react_1.default.createElement(material_1.Button, { onClick: () => onChange((0, util_2.moveUp)([...rows], selected, rows.length)), disabled: !selected.length },
-            react_1.default.createElement(KeyboardDoubleArrowUp_1.default, null),
-            showTips ? 'Move selected items to top' : null),
-        react_1.default.createElement(material_1.Button, { onClick: () => onChange((0, util_2.moveDown)([...rows], selected, rows.length)), disabled: !selected.length },
-            react_1.default.createElement(KeyboardDoubleArrowDown_1.default, null),
-            showTips ? 'Move selected items to bottom' : null),
-        react_1.default.createElement(ColorPicker_1.ColorPopover, { anchorEl: anchorEl, color: widgetColor, onChange: c => {
-                setWidgetColor(c);
-                selected.forEach(id => {
-                    const elt = rows.find(f => f.name === id);
-                    if (elt) {
-                        elt.color = c;
-                    }
-                });
-                onChange([...rows]);
-            }, onClose: () => setAnchorEl(null) }),
-        react_1.default.createElement("div", { style: { height: 400, width: '100%' } },
-            react_1.default.createElement(x_data_grid_1.DataGrid, { getRowId: row => row.name, checkboxSelection: true, disableRowSelectionOnClick: true, onRowSelectionModelChange: arg => setSelected(arg), rows: rows, rowHeight: 25, columnHeaderHeight: 33, columns: [
-                    {
-                        field: 'color',
-                        headerName: 'Color',
-                        renderCell: params => {
-                            const { value, id } = params;
-                            return (react_1.default.createElement(ColorPicker_1.default, { color: value || 'blue', onChange: c => {
-                                    const elt = rows.find(f => f.name === id);
-                                    if (elt) {
-                                        elt.color = c;
-                                    }
-                                    onChange([...rows]);
-                                } }));
-                        },
-                    },
-                    {
-                        field: 'name',
-                        sortingOrder: [null],
-                        headerName: 'Name',
-                        width: (0, util_1.measureGridWidth)(rows.map(r => r.name)),
-                    },
-                    ...Object.keys(rest).map(val => ({
-                        field: val,
-                        sortingOrder: [null],
-                        renderCell: (params) => {
-                            const { value } = params;
-                            return (0, util_1.isUriLocation)(value) ? (react_1.default.createElement(UriLink_1.default, { value: value })) : ((0, util_1.getStr)(value));
-                        },
-                        // @ts-ignore
-                        width: (0, util_1.measureGridWidth)(rows.map(r => r[val])),
-                    })),
-                ], sortModel: [
-                /* we control the sort as a controlled component using onSortModelChange */
-                ], onSortModelChange: args => {
-                    const sort = args[0];
-                    const idx = (currSort.idx + 1) % 2;
-                    const field = (sort === null || sort === void 0 ? void 0 : sort.field) || currSort.field;
-                    setCurrSort({ idx, field });
-                    onChange(field
-                        ? [...rows].sort((a, b) => {
-                            // @ts-expect-error
-                            const aa = (0, util_1.getStr)(a[field]);
-                            // @ts-expect-error
-                            const bb = (0, util_1.getStr)(b[field]);
-                            return idx === 1
-                                ? aa.localeCompare(bb)
-                                : bb.localeCompare(aa);
-                        })
-                        : rows);
-                } }))));
-}

package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts

@@ -0,0 +1,8 @@
+import React from 'react';
+import { Source } from '../../util';
+declare function SourcesGrid({ rows, onChange, showTips, }: {
+    rows: Source[];
+    onChange: (arg: Source[]) => void;
+    showTips: boolean;
+}): React.JSX.Element;
+export default SourcesGrid;

package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.js

@@ -0,0 +1,138 @@
+"use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+const react_1 = __importStar(require("react"));
+const material_1 = require("@mui/material");
+const util_1 = require("@jbrowse/core/util");
+const x_data_grid_1 = require("@mui/x-data-grid");
+const mui_1 = require("tss-react/mui");
+// locals
+const ColorPicker_1 = __importStar(require("@jbrowse/core/ui/ColorPicker"));
+const util_2 = require("./util");
+// icons
+const KeyboardDoubleArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowUp"));
+const KeyboardDoubleArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowDown"));
+const KeyboardArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardArrowDown"));
+const KeyboardArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardArrowUp"));
+const ui_1 = require("@jbrowse/core/ui");
+const useStyles = (0, mui_1.makeStyles)()({
+    cell: {
+        whiteSpace: 'nowrap',
+        overflow: 'hidden',
+        textOverflow: 'ellipsis',
+    },
+});
+function SourcesGrid({ rows, onChange, showTips, }) {
+    const { classes } = useStyles();
+    const [anchorEl, setAnchorEl] = (0, react_1.useState)(null);
+    const [selected, setSelected] = (0, react_1.useState)([]);
+    // @ts-expect-error
+    const { name: _name, color: _color, baseUri: _baseUri, ...rest } = rows[0];
+    const [widgetColor, setWidgetColor] = (0, react_1.useState)('blue');
+    const [currSort, setCurrSort] = (0, react_1.useState)({
+        idx: 0,
+        field: null,
+    });
+    return (react_1.default.createElement("div", null,
+        react_1.default.createElement(material_1.Button, { disabled: !selected.length, onClick: event => setAnchorEl(event.currentTarget) }, "Change color of selected items"),
+        react_1.default.createElement(material_1.Button, { onClick: () => onChange((0, util_2.moveUp)([...rows], selected)), disabled: !selected.length },
+            react_1.default.createElement(KeyboardArrowUp_1.default, null),
+            showTips ? 'Move selected items up' : null),
+        react_1.default.createElement(material_1.Button, { onClick: () => onChange((0, util_2.moveDown)([...rows], selected)), disabled: !selected.length },
+            react_1.default.createElement(KeyboardArrowDown_1.default, null),
+            showTips ? 'Move selected items down' : null),
+        react_1.default.createElement(material_1.Button, { onClick: () => onChange((0, util_2.moveUp)([...rows], selected, rows.length)), disabled: !selected.length },
+            react_1.default.createElement(KeyboardDoubleArrowUp_1.default, null),
+            showTips ? 'Move selected items to top' : null),
+        react_1.default.createElement(material_1.Button, { onClick: () => onChange((0, util_2.moveDown)([...rows], selected, rows.length)), disabled: !selected.length },
+            react_1.default.createElement(KeyboardDoubleArrowDown_1.default, null),
+            showTips ? 'Move selected items to bottom' : null),
+        react_1.default.createElement(ColorPicker_1.ColorPopover, { anchorEl: anchorEl, color: widgetColor, onChange: c => {
+                setWidgetColor(c);
+                selected.forEach(id => {
+                    const elt = rows.find(f => f.name === id);
+                    if (elt) {
+                        elt.color = c;
+                    }
+                });
+                onChange([...rows]);
+            }, onClose: () => setAnchorEl(null) }),
+        react_1.default.createElement("div", { style: { height: 400, width: '100%' } },
+            react_1.default.createElement(x_data_grid_1.DataGrid, { getRowId: row => row.name, checkboxSelection: true, disableRowSelectionOnClick: true, onRowSelectionModelChange: arg => setSelected(arg), rows: rows, rowHeight: 25, columnHeaderHeight: 33, columns: [
+                    {
+                        field: 'color',
+                        headerName: 'Color',
+                        renderCell: params => {
+                            const { value, id } = params;
+                            return (react_1.default.createElement(ColorPicker_1.default, { color: value || 'blue', onChange: c => {
+                                    const elt = rows.find(f => f.name === id);
+                                    if (elt) {
+                                        elt.color = c;
+                                    }
+                                    onChange([...rows]);
+                                } }));
+                        },
+                    },
+                    {
+                        field: 'name',
+                        sortingOrder: [null],
+                        headerName: 'Name',
+                        width: (0, util_1.measureGridWidth)(rows.map(r => r.name)),
+                    },
+                    ...Object.keys(rest).map(val => ({
+                        field: val,
+                        sortingOrder: [null],
+                        renderCell: (params) => {
+                            const { value } = params;
+                            return (react_1.default.createElement("div", { className: classes.cell },
+                                react_1.default.createElement(ui_1.SanitizedHTML, { html: (0, util_1.getStr)(value) })));
+                        },
+                        // @ts-ignore
+                        width: (0, util_1.measureGridWidth)(rows.map(r => r[val])),
+                    })),
+                ], sortModel: [
+                /* we control the sort as a controlled component using onSortModelChange */
+                ], onSortModelChange: args => {
+                    const sort = args[0];
+                    const idx = (currSort.idx + 1) % 2;
+                    const field = (sort === null || sort === void 0 ? void 0 : sort.field) || currSort.field;
+                    setCurrSort({ idx, field });
+                    onChange(field
+                        ? [...rows].sort((a, b) => {
+                            // @ts-expect-error
+                            const aa = (0, util_1.getStr)(a[field]);
+                            // @ts-expect-error
+                            const bb = (0, util_1.getStr)(b[field]);
+                            return idx === 1
+                                ? aa.localeCompare(bb)
+                                : bb.localeCompare(aa);
+                        })
+                        : rows);
+                } }))));
+}
+exports.default = SourcesGrid;

package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts

@@ -2,12 +2,13 @@ import React from 'react';
 import { Feature } from '@jbrowse/core/util';
 import { Source } from '../../util';
 import { TooltipContentsComponent } from '../../Tooltip';
-declare const TooltipContents: React.ForwardRefExoticComponent<{
+interface Props {
     model: {
         sources: Source[];
     };
     feature: Feature;
-} & React.RefAttributes<HTMLDivElement>>;
+}
+declare const TooltipContents: React.ForwardRefExoticComponent<Props & React.RefAttributes<HTMLDivElement>>;
 type Coord = [number, number];
 declare const WiggleTooltip: (props: {
     model: {

package/dist/MultiLinearWiggleDisplay/components/Tooltip.js

@@ -10,7 +10,7 @@ const mobx_react_1 = require("mobx-react");
 const util_1 = require("../../util");
 const Tooltip_1 = __importDefault(require("../../Tooltip"));
 const en = (n) => n.toLocaleString('en-US');
-const TooltipContents = react_1.default.forwardRef(({ model, feature }, ref) => {
+const TooltipContents = react_1.default.forwardRef(function TooltipContents2({ model, feature }, ref) {
     const start = feature.get('start');
     const end = feature.get('end');
     const refName = feature.get('refName');

package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts

@@ -1,7 +1,6 @@
 import React from 'react';
 import { WiggleDisplayModel } from '../models/model';
-declare const _default: (props: {
+declare const MultiLinearWiggleDisplayComponent: (props: {
     model: WiggleDisplayModel;
 }) => React.JSX.Element;
-export default _default;
-export { default as YScaleBar } from '../../shared/YScaleBar';
+export default MultiLinearWiggleDisplayComponent;

package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js

@@ -3,16 +3,14 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.YScaleBar = void 0;
 const react_1 = __importDefault(require("react"));
 const plugin_linear_genome_view_1 = require("@jbrowse/plugin-linear-genome-view");
 const mobx_react_1 = require("mobx-react");
 const YScaleBars_1 = __importDefault(require("./YScaleBars"));
-exports.default = (0, mobx_react_1.observer)((props) => {
+const MultiLinearWiggleDisplayComponent = (0, mobx_react_1.observer)((props) => {
     const { model } = props;
     return (react_1.default.createElement("div", null,
         react_1.default.createElement(plugin_linear_genome_view_1.BaseLinearDisplayComponent, { ...props }),
         react_1.default.createElement(YScaleBars_1.default, { model: model })));
 });
-var YScaleBar_1 = require("../../shared/YScaleBar");
-Object.defineProperty(exports, "YScaleBar", { enumerable: true, get: function () { return __importDefault(YScaleBar_1).default; } });
+exports.default = MultiLinearWiggleDisplayComponent;

package/dist/MultiLinearWiggleDisplay/components/util.js

@@ -8,8 +8,7 @@ function moveUp(arr, sel, by = 1) {
         .map(l => arr.findIndex(v => v.name === l))
         .sort((a, b) => a - b);
     let lastIdx = 0;
-    for (let i = 0; i < idxs.length; i++) {
-        const old = idxs[i];
+    for (const old of idxs) {
         const idx = Math.max(lastIdx, old - by);
         if (idx >= lastIdx) {
             arr.splice(idx, 0, arr.splice(old, 1)[0]);
@@ -24,8 +23,7 @@ function moveDown(arr, sel, by = 1) {
         .map(l => arr.findIndex(v => v.name === l))
         .sort((a, b) => b - a);
     let lastIdx = arr.length - 1;
-    for (let i = 0; i < idxs.length; i++) {
-        const old = idxs[i];
+    for (const old of idxs) {
         const idx = Math.min(lastIdx, old + by);
         if (idx <= lastIdx) {
             arr.splice(idx, 0, arr.splice(old, 1)[0]);

package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js

@@ -4,22 +4,22 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 const util_1 = require("@jbrowse/core/util");
-const drawxy_1 = require("../drawxy");
+const drawLine_1 = require("../drawLine");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
 class MultiRowLineRenderer extends WiggleBaseRenderer_1.default {
     // @ts-expect-error
     async draw(ctx, props) {
         const { bpPerPx, sources, regions, features } = props;
         const [region] = regions;
-        const groups = (0, util_1.groupBy)([...features.values()], f => f.get('source'));
+        const groups = (0, util_1.groupBy)(features.values(), f => f.get('source'));
         const height = props.height / sources.length;
         const width = (region.end - region.start) / bpPerPx;
         let feats = [];
         ctx.save();
         sources.forEach(source => {
-            const { reducedFeatures } = (0, drawxy_1.drawLine)(ctx, {
+            const { reducedFeatures } = (0, drawLine_1.drawLine)(ctx, {
                 ...props,
-                features: groups[source.name],
+                features: groups[source.name] || [],
                 height,
                 colorCallback: () => source.color || 'blue',
             });
@@ -29,7 +29,7 @@ class MultiRowLineRenderer extends WiggleBaseRenderer_1.default {
             ctx.lineTo(width, height);
             ctx.stroke();
             ctx.translate(0, height);
-            feats = [...feats, ...reducedFeatures];
+            feats = feats.concat(reducedFeatures);
         });
         ctx.restore();
         return { reducedFeatures: feats };