@jbrowse/plugin-wiggle 2.16.1 → 2.17.0

package/esm/MultiLinearWiggleDisplay/{models/model.d.ts → model.d.ts}

@@ -3,11 +3,7 @@ import { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
 import { Feature, AnyReactComponentType } from '@jbrowse/core/util';
 import PluginManager from '@jbrowse/core/PluginManager';
 import { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
-interface Source {
-    name: string;
-    color?: string;
-    group?: string;
-}
+import { Source } from '../util';
 /**
  * #stateModel MultiLinearWiggleDisplay
  * extends
@@ -166,12 +162,12 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
             rendererTypeName: string;
             error: unknown;
             message: string | undefined;
-        } & import("mobx-state-tree" /**
-         * #action
-         */).IStateTreeNode<import("mobx-state-tree").IModelType<{
+        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
             id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
             type: import("mobx-state-tree").ISimpleType<string>;
-            rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
+            rpcDriverName: import("mobx-state-tree" /**
+             * #getter
+             */).IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         }, {
             rendererTypeName: string;
             error: unknown;
@@ -261,19 +257,21 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
 } & {
     message: undefined | string;
     stats: {
+        currStatsBpPerPx: number;
         scoreMin: number;
         scoreMax: number;
     } | undefined;
     statsFetchInProgress: undefined | AbortController;
 } & {
     updateQuantitativeStats(stats: {
+        currStatsBpPerPx: number;
         scoreMin: number;
         scoreMax: number;
     }): void;
     setColor(color?: string): void;
     setPosColor(color?: string): void;
     setNegColor(color?: string): void;
-    setLoading(aborter: AbortController): void;
+    setStatsLoading(aborter: AbortController): void;
     selectFeature(feature: Feature): void;
     setResolution(res: number): void;
     setFill(fill: number): void;
@@ -303,7 +301,9 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
             setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
                 [x: string]: any;
-            } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
+            } & import("mobx-state-tree/dist/internal" /**
+             * #property
+             */).NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
         } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
     } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
     readonly autoscaleType: any;
@@ -315,6 +315,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
     readonly scaleOpts: {
         domain: number[] | undefined;
         stats: {
+            currStatsBpPerPx: number;
             scoreMin: number;
             scoreMax: number;
         } | undefined;
@@ -402,6 +403,9 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
      * implemented like this yet but flag can be used for this
      */
     readonly needsCustomLegend: boolean;
+    /**
+     * #getter
+     */
     readonly canHaveFill: boolean;
     /**
      * #getter
@@ -421,9 +425,14 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
      */
     readonly sources: {
         color: string;
+        baseUri?: string;
         name: string;
         group?: string;
     }[] | undefined;
+    /**
+     * #getter
+     */
+    readonly quantitativeStatsReady: boolean;
 } & {
     /**
      * #getter
@@ -438,6 +447,10 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
      */
     readonly useMinimalTicks: any;
 } & {
+    /**
+     * #method
+     */
+    adapterProps(): any;
     /**
      * #getter
      */
@@ -451,6 +464,11 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
      * #getter
      */
     readonly colors: string[];
+    /**
+     * #getter
+     * unused currently
+     */
+    readonly quantitativeStatsRelevantToCurrentZoom: boolean;
 } & {
     /**
      * #method
@@ -467,7 +485,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
     /**
      * #getter
      */
-    readonly fillSetting: 2 | 0 | 1;
+    readonly fillSetting: 2 | 1 | 0;
 } & {
     /**
      * #method

package/esm/MultiLinearWiggleDisplay/{models/model.js → model.js}

@@ -1,20 +1,18 @@
 import { lazy } from 'react';
-import { addDisposer, isAlive, types } from 'mobx-state-tree';
-import { autorun } from 'mobx';
+import { isAlive, types } from 'mobx-state-tree';
 import { axisPropsFromTickScale } from 'react-d3-axis-mod';
 import deepEqual from 'fast-deep-equal';
 // jbrowse imports
 import { getConf, } from '@jbrowse/core/configuration';
-import { getSession } from '@jbrowse/core/util';
-import { getRpcSessionId } from '@jbrowse/core/util/tracks';
+import { getSession, getContainingView, } from '@jbrowse/core/util';
 import { set1 as colors } from '@jbrowse/core/ui/colors';
 // locals
-import { getScale, YSCALEBAR_LABEL_OFFSET } from '../../util';
-import SharedWiggleMixin from '../../shared/modelShared';
+import { getScale, YSCALEBAR_LABEL_OFFSET } from '../util';
+import SharedWiggleMixin from '../shared/SharedWiggleMixin';
 const randomColor = () => '#000000'.replaceAll('0', () => (~~(Math.random() * 16)).toString(16));
 // lazies
-const Tooltip = lazy(() => import('../components/Tooltip'));
-const SetColorDialog = lazy(() => import('../components/SetColorDialog'));
+const Tooltip = lazy(() => import('./components/Tooltip'));
+const SetColorDialog = lazy(() => import('./components/SetColorDialog'));
 // using a map because it preserves order
 const rendererTypes = new Map([
     ['xyplot', 'MultiXYPlotRenderer'],
@@ -130,6 +128,9 @@ export function stateModelFactory(pluginManager, configSchema) {
         get needsCustomLegend() {
             return self.rendererTypeName === 'MultiDensityRenderer';
         },
+        /**
+         * #getter
+         */
         get canHaveFill() {
             return (self.rendererTypeName === 'MultiXYPlotRenderer' ||
                 self.rendererTypeName === 'MultiRowXYPlotRenderer');
@@ -168,6 +169,16 @@ export function stateModelFactory(pluginManager, configSchema) {
                     (!this.isMultiRow ? colors[i] || randomColor() : 'blue'),
             }));
         },
+        /**
+         * #getter
+         */
+        get quantitativeStatsReady() {
+            const view = getContainingView(self);
+            return (view.initialized &&
+                self.featureDensityStatsReady &&
+                !self.regionTooLarge &&
+                !self.error);
+        },
     }))
         .views(self => ({
         /**
@@ -189,42 +200,6 @@ export function stateModelFactory(pluginManager, configSchema) {
         get useMinimalTicks() {
             return (getConf(self, 'minimalTicks') || this.rowHeightTooSmallForScalebar);
         },
-    }))
-        .views(self => ({
-        /**
-         * #getter
-         */
-        get ticks() {
-            const { scaleType, domain, isMultiRow, rowHeight, useMinimalTicks } = self;
-            if (!domain) {
-                return undefined;
-            }
-            const offset = isMultiRow ? 0 : YSCALEBAR_LABEL_OFFSET;
-            const ticks = axisPropsFromTickScale(getScale({
-                scaleType,
-                domain,
-                range: [rowHeight - offset, offset],
-                inverted: getConf(self, 'inverted'),
-            }), 4);
-            return useMinimalTicks ? { ...ticks, values: domain } : ticks;
-        },
-        /**
-         * #getter
-         */
-        get colors() {
-            return [
-                'red',
-                'blue',
-                'green',
-                'orange',
-                'purple',
-                'cyan',
-                'pink',
-                'darkblue',
-                'darkred',
-                'pink',
-            ];
-        },
     }))
         .views(self => {
         const { renderProps: superRenderProps } = self;
@@ -232,58 +207,114 @@ export function stateModelFactory(pluginManager, configSchema) {
             /**
              * #method
              */
-            renderProps() {
+            adapterProps() {
                 const superProps = superRenderProps();
-                const { displayCrossHatches, filters, height, resolution, rpcDriverName, scaleOpts, stats, sources, ticks, rendererConfig: config, } = self;
                 return {
                     ...superProps,
-                    notReady: superProps.notReady || !sources || !stats,
                     displayModel: self,
-                    config,
-                    displayCrossHatches,
-                    filters,
-                    height,
-                    resolution,
-                    rpcDriverName,
-                    scaleOpts,
-                    sources,
-                    ticks,
-                    onMouseMove: (_, f) => {
-                        self.setFeatureUnderMouse(f);
-                    },
-                    onMouseLeave: () => {
-                        self.setFeatureUnderMouse(undefined);
-                    },
+                    config: self.rendererConfig,
+                    filters: self.filters,
+                    resolution: self.resolution,
+                    rpcDriverName: self.rpcDriverName,
+                    sources: self.sources,
                 };
             },
             /**
              * #getter
              */
-            get hasResolution() {
-                return self.adapterCapabilities.includes('hasResolution');
+            get ticks() {
+                const { scaleType, domain, isMultiRow, rowHeight, useMinimalTicks } = self;
+                if (!domain) {
+                    return undefined;
+                }
+                const offset = isMultiRow ? 0 : YSCALEBAR_LABEL_OFFSET;
+                const ticks = axisPropsFromTickScale(getScale({
+                    scaleType,
+                    domain,
+                    range: [rowHeight - offset, offset],
+                    inverted: getConf(self, 'inverted'),
+                }), 4);
+                return useMinimalTicks ? { ...ticks, values: domain } : ticks;
             },
             /**
              * #getter
              */
-            get hasGlobalStats() {
-                return self.adapterCapabilities.includes('hasGlobalStats');
+            get colors() {
+                return [
+                    'red',
+                    'blue',
+                    'green',
+                    'orange',
+                    'purple',
+                    'cyan',
+                    'pink',
+                    'darkblue',
+                    'darkred',
+                    'pink',
+                ];
             },
             /**
              * #getter
+             * unused currently
              */
-            get fillSetting() {
-                if (self.filled) {
-                    return 0;
-                }
-                else if (self.minSize === 1) {
-                    return 1;
-                }
-                else {
-                    return 2;
-                }
+            get quantitativeStatsRelevantToCurrentZoom() {
+                var _a;
+                const view = getContainingView(self);
+                return ((_a = self.stats) === null || _a === void 0 ? void 0 : _a.currStatsBpPerPx) === view.bpPerPx;
             },
         };
     })
+        .views(self => ({
+        /**
+         * #method
+         */
+        renderProps() {
+            const superProps = self.adapterProps();
+            return {
+                ...superProps,
+                notReady: superProps.notReady || !self.sources || !self.stats,
+                displayModel: self,
+                rpcDriverName: self.rpcDriverName,
+                displayCrossHatches: self.displayCrossHatches,
+                height: self.height,
+                ticks: self.ticks,
+                stats: self.stats,
+                scaleOpts: self.scaleOpts,
+                onMouseMove: (_, f) => {
+                    self.setFeatureUnderMouse(f);
+                },
+                onMouseLeave: () => {
+                    self.setFeatureUnderMouse(undefined);
+                },
+            };
+        },
+        /**
+         * #getter
+         */
+        get hasResolution() {
+            return self.adapterCapabilities.includes('hasResolution');
+        },
+        /**
+         * #getter
+         */
+        get hasGlobalStats() {
+            return self.adapterCapabilities.includes('hasGlobalStats');
+        },
+        /**
+         * #getter
+         */
+        get fillSetting() {
+            if (self.filled) {
+                return 0;
+            }
+            else if (self.minSize === 1) {
+                return 1;
+            }
+            else {
+                return 2;
+            }
+        },
+    }))
         .views(self => {
         const { trackMenuItems: superTrackMenuItems } = self;
         const hasRenderings = getConf(self, 'defaultRendering');
@@ -366,20 +397,20 @@ export function stateModelFactory(pluginManager, configSchema) {
                 // eslint-disable-next-line @typescript-eslint/no-floating-promises
                 ;
                 (async () => {
-                    const { quantitativeStatsAutorun } = await import('../../util');
-                    quantitativeStatsAutorun(self);
-                    addDisposer(self, autorun(async () => {
-                        const { rpcManager } = getSession(self);
-                        const { adapterConfig } = self;
-                        const sessionId = getRpcSessionId(self);
-                        const sources = (await rpcManager.call(sessionId, 'MultiWiggleGetSources', {
-                            sessionId,
-                            adapterConfig,
-                        }));
+                    try {
+                        const [{ getMultiWiggleSourcesAutorun }, { getQuantitativeStatsAutorun },] = await Promise.all([
+                            import('../getMultiWiggleSourcesAutorun'),
+                            import('../getQuantitativeStatsAutorun'),
+                        ]);
+                        getQuantitativeStatsAutorun(self);
+                        getMultiWiggleSourcesAutorun(self);
+                    }
+                    catch (e) {
                         if (isAlive(self)) {
-                            self.setSources(sources);
+                            console.error(e);
+                            getSession(self).notifyError(`${e}`, e);
                         }
-                    }));
+                    }
                 })();
             },
             /**

package/esm/MultiLinearWiggleDisplay/{models/renderSvg.js → renderSvg.js}

@@ -1,7 +1,7 @@
 import React from 'react';
 import { getContainingView } from '@jbrowse/core/util';
 import { when } from 'mobx';
-import YScaleBars from '../components/YScaleBars';
+import YScaleBars from './components/YScaleBars';
 export async function renderSvg(self, opts, superRenderSvg) {
     await when(() => !!self.stats && !!self.regionCannotBeRenderedText);
     const { offsetPx } = getContainingView(self);

package/esm/MultiRowXYPlotRenderer/configSchema.js

@@ -35,7 +35,7 @@ const configSchema = ConfigurationSchema('MultiRowXYPlotRenderer', {
      */
     minSize: {
         type: 'number',
-        defaultValue: 0,
+        defaultValue: 0.7,
     },
 }, {
     /**

package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts

@@ -21,7 +21,7 @@ export default class MultiWiggleAdapter extends BaseFeatureDataAdapter {
     getMultiRegionFeatureDensityStats(_regions: Region[]): Promise<{
         featureDensity: number;
     }>;
-    getSources(): Promise<{
+    getSources(_regions: Region[]): Promise<{
         name: string;
         __name: unknown;
     }[]>;

package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js

@@ -65,11 +65,13 @@ class MultiWiggleAdapter extends BaseFeatureDataAdapter {
     }
     // always render bigwig instead of calculating a feature density for it
     async getMultiRegionFeatureDensityStats(_regions) {
-        return { featureDensity: 0 };
+        return {
+            featureDensity: 0,
+        };
     }
     // in another adapter type, this could be dynamic depending on region or
     // something, but it is static for this particular multi-wiggle adapter type
-    async getSources() {
+    async getSources(_regions) {
         const adapters = await this.getAdapters();
         return adapters.map(({ dataAdapter, source, name, ...rest }) => ({
             name: source,

package/esm/MultiXYPlotRenderer/configSchema.js

@@ -35,7 +35,7 @@ const configSchema = ConfigurationSchema('MultiXYPlotRenderer', {
      */
     minSize: {
         type: 'number',
-        defaultValue: 0,
+        defaultValue: 0.7,
     },
 }, {
     /**

package/esm/WiggleBaseRenderer.d.ts

@@ -54,4 +54,4 @@ export default abstract class WiggleBaseRenderer extends FeatureRendererType {
      */
     abstract draw<T extends RenderArgsDeserializedWithFeatures>(ctx: CanvasRenderingContext2D, props: T): Promise<Record<string, unknown> | undefined>;
 }
-export { type RenderArgsSerialized, type RenderResults, type ResultsDeserialized, type ResultsSerialized, } from '@jbrowse/core/pluggableElementTypes/renderers/FeatureRendererType';
+export type { RenderArgsSerialized, RenderResults, ResultsDeserialized, ResultsSerialized, } from '@jbrowse/core/pluggableElementTypes/renderers/FeatureRendererType';

package/esm/XYPlotRenderer/configSchema.js

@@ -35,7 +35,7 @@ const configSchema = ConfigurationSchema('XYPlotRenderer', {
      */
     minSize: {
         type: 'number',
-        defaultValue: 0,
+        defaultValue: 0.7,
     },
 }, {
     /**

package/esm/getMultiWiggleSourcesAutorun.d.ts

@@ -0,0 +1,17 @@
+import { AnyConfigurationModel } from '@jbrowse/core/configuration';
+export interface Source {
+    name: string;
+    color?: string;
+    group?: string;
+}
+export declare function getMultiWiggleSourcesAutorun(self: {
+    quantitativeStatsReady: boolean;
+    configuration: AnyConfigurationModel;
+    adapterConfig: AnyConfigurationModel;
+    autoscaleType: string;
+    adapterProps: () => Record<string, unknown>;
+    setStatsLoading: (aborter: AbortController) => void;
+    setError: (error: unknown) => void;
+    setMessage: (str: string) => void;
+    setSources: (sources: Source[]) => void;
+}): void;

package/esm/getMultiWiggleSourcesAutorun.js

@@ -0,0 +1,32 @@
+import { autorun } from 'mobx';
+import { addDisposer, isAlive } from 'mobx-state-tree';
+// jbrowse
+import { getContainingView, getSession, isAbortException, } from '@jbrowse/core/util';
+import { getRpcSessionId } from '@jbrowse/core/util/tracks';
+export function getMultiWiggleSourcesAutorun(self) {
+    addDisposer(self, autorun(async () => {
+        try {
+            const { rpcManager } = getSession(self);
+            const { adapterConfig } = self;
+            const sessionId = getRpcSessionId(self);
+            const view = getContainingView(self);
+            if (!view.initialized) {
+                return;
+            }
+            const sources = (await rpcManager.call(sessionId, 'MultiWiggleGetSources', {
+                regions: view.staticBlocks.contentBlocks,
+                sessionId,
+                adapterConfig,
+            }));
+            if (isAlive(self)) {
+                self.setSources(sources);
+            }
+        }
+        catch (e) {
+            if (!isAbortException(e) && isAlive(self)) {
+                console.error(e);
+                getSession(self).notifyError(`${e}`, e);
+            }
+        }
+    }));
+}

package/esm/getQuantitativeStats.d.ts

@@ -0,0 +1,13 @@
+import { QuantitativeStats } from '@jbrowse/core/util/stats';
+import { AnyConfigurationModel } from '@jbrowse/core/configuration';
+export declare function getQuantitativeStats(self: {
+    adapterConfig: AnyConfigurationModel;
+    configuration: AnyConfigurationModel;
+    autoscaleType: string;
+    setMessage: (str: string) => void;
+}, opts: {
+    headers?: Record<string, string>;
+    signal?: AbortSignal;
+    filters: string[];
+    currStatsBpPerPx: number;
+}): Promise<QuantitativeStats>;

package/esm/getQuantitativeStats.js

@@ -0,0 +1,75 @@
+import { isAlive } from 'mobx-state-tree';
+// jbrowse
+import { getSession, getContainingView } from '@jbrowse/core/util';
+import { getRpcSessionId } from '@jbrowse/core/util/tracks';
+import { getConf } from '@jbrowse/core/configuration';
+export async function getQuantitativeStats(self, opts) {
+    const { rpcManager } = getSession(self);
+    const numStdDev = getConf(self, 'numStdDev') || 3;
+    const { adapterConfig, autoscaleType } = self;
+    const sessionId = getRpcSessionId(self);
+    const { currStatsBpPerPx } = opts;
+    const params = {
+        sessionId,
+        adapterConfig,
+        statusCallback: (message) => {
+            if (isAlive(self)) {
+                self.setMessage(message);
+            }
+        },
+        ...opts,
+    };
+    if (autoscaleType === 'global' || autoscaleType === 'globalsd') {
+        const results = (await rpcManager.call(sessionId, 'WiggleGetGlobalQuantitativeStats', params));
+        const { scoreMin, scoreMean, scoreStdDev } = results;
+        // globalsd uses heuristic to avoid unnecessary scoreMin<0
+        //
+        // if the scoreMin is never less than 0 helps with most coverage bigwigs
+        // just being >0
+        return autoscaleType === 'globalsd'
+            ? {
+                ...results,
+                scoreMin: scoreMin >= 0 ? 0 : scoreMean - numStdDev * scoreStdDev,
+                scoreMax: scoreMean + numStdDev * scoreStdDev,
+                currStatsBpPerPx,
+            }
+            : {
+                ...results,
+                currStatsBpPerPx,
+            };
+    }
+    if (autoscaleType === 'local' || autoscaleType === 'localsd') {
+        const { dynamicBlocks, bpPerPx } = getContainingView(self);
+        const results = (await rpcManager.call(sessionId, 'WiggleGetMultiRegionQuantitativeStats', {
+            ...params,
+            regions: dynamicBlocks.contentBlocks.map(region => {
+                const { start, end } = region;
+                return {
+                    ...JSON.parse(JSON.stringify(region)),
+                    start: Math.floor(start),
+                    end: Math.ceil(end),
+                };
+            }),
+            bpPerPx,
+        }));
+        const { scoreMin, scoreMean, scoreStdDev } = results;
+        // localsd uses heuristic to avoid unnecessary scoreMin<0 if the
+        // scoreMin is never less than 0 helps with most coverage bigwigs
+        // just being >0
+        return autoscaleType === 'localsd'
+            ? {
+                ...results,
+                scoreMin: scoreMin >= 0 ? 0 : scoreMean - numStdDev * scoreStdDev,
+                scoreMax: scoreMean + numStdDev * scoreStdDev,
+                currStatsBpPerPx,
+            }
+            : {
+                ...results,
+                currStatsBpPerPx,
+            };
+    }
+    if (autoscaleType === 'zscale') {
+        return rpcManager.call(sessionId, 'WiggleGetGlobalQuantitativeStats', params);
+    }
+    throw new Error(`invalid autoscaleType '${autoscaleType}'`);
+}

package/esm/getQuantitativeStatsAutorun.d.ts

@@ -0,0 +1,13 @@
+import { QuantitativeStats } from '@jbrowse/core/util/stats';
+import { AnyConfigurationModel } from '@jbrowse/core/configuration';
+export declare function getQuantitativeStatsAutorun(self: {
+    quantitativeStatsReady: boolean;
+    configuration: AnyConfigurationModel;
+    adapterConfig: AnyConfigurationModel;
+    autoscaleType: string;
+    adapterProps: () => Record<string, unknown>;
+    setStatsLoading: (aborter: AbortController) => void;
+    setError: (error: unknown) => void;
+    setMessage: (str: string) => void;
+    updateQuantitativeStats: (stats: QuantitativeStats, region: string) => void;
+}): void;

package/esm/getQuantitativeStatsAutorun.js

@@ -0,0 +1,34 @@
+import { autorun } from 'mobx';
+import { addDisposer, isAlive } from 'mobx-state-tree';
+// jbrowse
+import { isAbortException, getContainingView } from '@jbrowse/core/util';
+// locals
+import { getQuantitativeStats } from './getQuantitativeStats';
+export function getQuantitativeStatsAutorun(self) {
+    addDisposer(self, autorun(async () => {
+        try {
+            const view = getContainingView(self);
+            const aborter = new AbortController();
+            self.setStatsLoading(aborter);
+            if (!self.quantitativeStatsReady) {
+                return;
+            }
+            const statsRegion = JSON.stringify(view.dynamicBlocks);
+            const wiggleStats = await getQuantitativeStats(self, {
+                signal: aborter.signal,
+                filters: [],
+                currStatsBpPerPx: view.bpPerPx,
+                ...self.adapterProps(),
+            });
+            if (isAlive(self)) {
+                self.updateQuantitativeStats(wiggleStats, statsRegion);
+            }
+        }
+        catch (e) {
+            console.error(e);
+            if (!isAbortException(e) && isAlive(self)) {
+                self.setError(e);
+            }
+        }
+    }, { delay: 1000 }));
+}