@jbrowse/plugin-wiggle 2.11.2 → 2.12.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BigWigAdapter/BigWigAdapter.d.ts +1 -1
- package/dist/BigWigAdapter/index.js +1 -1
- package/dist/CreateMultiWiggleExtension/index.js +1 -1
- package/dist/DensityRenderer/index.js +1 -1
- package/dist/LinePlotRenderer/configSchema.d.ts +1 -3
- package/dist/LinePlotRenderer/index.js +1 -1
- package/dist/LinearWiggleDisplay/index.js +1 -1
- package/dist/LinearWiggleDisplay/models/configSchema.d.ts +1 -3
- package/dist/LinearWiggleDisplay/models/configSchema.js +1 -1
- package/dist/LinearWiggleDisplay/models/model.d.ts +52 -40
- package/dist/LinearWiggleDisplay/models/renderSvg.js +1 -2
- package/dist/MultiDensityRenderer/index.js +1 -1
- package/dist/MultiLineRenderer/index.js +1 -1
- package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.js +31 -7
- package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +1 -1
- package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.js +9 -14
- package/dist/MultiLinearWiggleDisplay/components/util.js +3 -4
- package/dist/MultiLinearWiggleDisplay/index.js +1 -1
- package/dist/MultiLinearWiggleDisplay/models/configSchema.d.ts +1 -3
- package/dist/MultiLinearWiggleDisplay/models/configSchema.js +1 -1
- package/dist/MultiLinearWiggleDisplay/models/model.d.ts +44 -50
- package/dist/MultiLinearWiggleDisplay/models/model.js +1 -2
- package/dist/MultiLinearWiggleDisplay/models/renderSvg.js +1 -2
- package/dist/MultiQuantitativeTrack/index.js +1 -1
- package/dist/MultiRowLineRenderer/index.js +1 -1
- package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +0 -3
- package/dist/MultiRowXYPlotRenderer/index.js +1 -1
- package/dist/MultiWiggleAdapter/index.js +1 -1
- package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +5 -2
- package/dist/MultiWiggleAddTrackWorkflow/index.js +1 -1
- package/dist/MultiXYPlotRenderer/index.js +1 -1
- package/dist/QuantitativeTrack/index.js +1 -1
- package/dist/WiggleBaseRenderer.d.ts +5 -6
- package/dist/XYPlotRenderer/index.js +1 -1
- package/dist/drawDensity.js +1 -2
- package/dist/drawLine.js +1 -2
- package/dist/drawXY.js +1 -2
- package/dist/index.d.ts +1 -822
- package/dist/shared/SetMinMaxDialog.js +1 -1
- package/dist/shared/configShared.d.ts +1 -3
- package/dist/shared/configShared.js +1 -1
- package/dist/shared/modelShared.d.ts +49 -55
- package/dist/shared/modelShared.js +1 -1
- package/dist/util.d.ts +1 -0
- package/dist/util.js +9 -9
- package/esm/BigWigAdapter/BigWigAdapter.d.ts +1 -1
- package/esm/LinePlotRenderer/configSchema.d.ts +1 -3
- package/esm/LinearWiggleDisplay/models/configSchema.d.ts +1 -3
- package/esm/LinearWiggleDisplay/models/model.d.ts +52 -40
- package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.js +8 -7
- package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.js +9 -14
- package/esm/MultiLinearWiggleDisplay/models/configSchema.d.ts +1 -3
- package/esm/MultiLinearWiggleDisplay/models/model.d.ts +44 -50
- package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +0 -3
- package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +4 -1
- package/esm/WiggleBaseRenderer.d.ts +5 -6
- package/esm/index.d.ts +1 -822
- package/esm/shared/configShared.d.ts +1 -3
- package/esm/shared/modelShared.d.ts +49 -55
- package/esm/util.d.ts +1 -0
- package/package.json +2 -2
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@@ -11,7 +11,7 @@ export default class BigWigAdapter extends BaseFeatureDataAdapter {
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private setupPre;
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setup(opts?: BaseOptions): Promise<{
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bigwig: BigWig;
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header:
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header: Awaited<ReturnType<BigWig["getHeader"]>>;
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}>;
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getRefNames(opts?: BaseOptions): Promise<string[]>;
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refIdToName(refId: number): Promise<string>;
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@@ -26,6 +26,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = BigWigAdapterF;
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const AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
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const configSchema_1 = __importDefault(require("./configSchema"));
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function BigWigAdapterF(pluginManager) {
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@@ -41,4 +42,3 @@ function BigWigAdapterF(pluginManager) {
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getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./BigWigAdapter'))).then(r => r.default),
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}));
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}
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exports.default = BigWigAdapterF;
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@@ -23,6 +23,7 @@ var __importStar = (this && this.__importStar) || function (mod) {
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return result;
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = CreateMultiWiggleExtensionF;
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const react_1 = require("react");
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const configuration_1 = require("@jbrowse/core/configuration");
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const util_1 = require("@jbrowse/core/util");
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@@ -82,4 +83,3 @@ function CreateMultiWiggleExtensionF(pm) {
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];
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});
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}
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exports.default = CreateMultiWiggleExtensionF;
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@@ -3,6 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = DensityRendererF;
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const configSchema_1 = __importDefault(require("./configSchema"));
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const DensityRenderer_1 = __importDefault(require("./DensityRenderer"));
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const WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
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@@ -14,4 +15,3 @@ function DensityRendererF(pluginManager) {
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pluginManager,
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}));
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}
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exports.default = DensityRendererF;
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = LinePlotRendererF;
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const configSchema_1 = __importDefault(require("./configSchema"));
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const WiggleRendering_1 = __importDefault(require("../WiggleRendering"));
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const LinePlotRenderer_1 = __importDefault(require("./LinePlotRenderer"));
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@@ -14,4 +15,3 @@ function LinePlotRendererF(pluginManager) {
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pluginManager,
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}));
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}
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exports.default = LinePlotRendererF;
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.modelFactory = exports.ReactComponent = exports.Tooltip = void 0;
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exports.default = LinearWiggleDisplayF;
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const DisplayType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/DisplayType"));
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const configSchema_1 = __importDefault(require("./models/configSchema"));
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const model_1 = __importDefault(require("./models/model"));
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});
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});
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}
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exports.default = LinearWiggleDisplayF;
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var Tooltip_1 = require("./components/Tooltip");
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Object.defineProperty(exports, "Tooltip", { enumerable: true, get: function () { return __importDefault(Tooltip_1).default; } });
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var WiggleDisplayComponent_1 = require("./components/WiggleDisplayComponent");
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = WiggleConfigFactory;
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const configuration_1 = require("@jbrowse/core/configuration");
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const mobx_state_tree_1 = require("mobx-state-tree");
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// locals
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@@ -41,4 +42,3 @@ function WiggleConfigFactory(pluginManager) {
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explicitlyTyped: true,
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});
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}
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exports.default = WiggleConfigFactory;
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@@ -24,7 +24,9 @@ declare function stateModelFactory(pluginManager: PluginManager, configSchema: A
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refName: import("mobx-state-tree").ISimpleType<string>;
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start: import("mobx-state-tree").ISimpleType<number>;
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end: import("mobx-state-tree").ISimpleType<number>;
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reversed: import("mobx-state-tree"
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reversed: import("mobx-state-tree" /**
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* #getter
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*/).IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
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} & {
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assemblyName: import("mobx-state-tree").ISimpleType<string>;
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}, {
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}, {
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renderInProgress: AbortController | undefined;
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filled: boolean;
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reactElement: React.ReactElement
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reactElement: React.ReactElement | undefined;
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features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
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layout: any;
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status: string;
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maxHeightReached: boolean;
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ReactComponent: ({ model, }: {
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model: {
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error
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error? /**
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* #getter
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*/: unknown;
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reload: () => void;
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message: React.ReactNode;
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filled?: boolean
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status?: string
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reactElement?: React.ReactElement
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filled?: boolean;
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status?: string;
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reactElement?: React.ReactElement;
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};
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}) => React.JSX.Element | undefined;
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renderProps: any;
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} & {
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doReload(): void;
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afterAttach(): void;
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setStatus(message: string): void;
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* #method
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*/
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setStatus(message: string): void;
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setLoading(abortController: AbortController): void;
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setMessage(messageText: string): void;
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setRendered(props: {
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reactElement: React.ReactElement;
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features: Map<string, import("@jbrowse/core/util").Feature>;
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layout: any;
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maxHeightReached: boolean;
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id: string;
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type: string;
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rpcDriverName: string | undefined;
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} & import(
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} & import(
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/**
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* #stateModel LinearWiggleDisplay
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* extends
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* - [SharedWiggleMixin](../sharedwigglemixin)
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*/
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"mobx-state-tree/dist/internal").NonEmptyObject & {
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rendererTypeName: string;
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error: unknown;
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message: string | undefined;
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rendererTypeName: string;
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message: string | undefined;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree"
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree" /**
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* #getter
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*/)._NotCustomized>>;
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onHorizontalScroll?: Function;
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blockState?: Record<string, any>;
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}>;
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readonly DisplayBlurb: React.FC<{
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model: {
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: any;
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renderProps(): any;
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* #getter
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*/
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renderProps(): any;
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readonly DisplayMessageComponent: React.FC<any
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readonly DisplayMessageComponent: undefined | React.FC<any>;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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regionCannotBeRendered(): null;
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} & {
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setMessage(arg?: string): void;
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setError(error?: unknown): void;
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setRpcDriverName(rpcDriverName: string): void;
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reload(): void;
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setHeight(displayHeight: number): number;
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resizeHeight(distance: number): number;
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} & {
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featureDensityStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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featureDensityStats: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
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currStatsBpPerPx: number;
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} & {
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setCurrStatsBpPerPx(n: number): void;
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
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getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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} & {
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readonly regionTooLarge: boolean;
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regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
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regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): React.JSX.Element | null;
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} & {
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featureIdUnderMouse:
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featureIdUnderMouse: undefined | string;
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contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
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} & {
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readonly blockType: "dynamicBlocks" | "staticBlocks";
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readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
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readonly TooltipComponent: React.FC<any>;
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readonly selectedFeatureId: string | undefined;
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readonly DisplayMessageComponent: React.FC<any
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readonly DisplayMessageComponent: undefined | React.FC<any>;
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} & {
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readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
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readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
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/**
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exports.renderSvg =
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@@ -17,4 +17,3 @@ async function renderSvg(self, opts, superRenderSvg) {
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react_1.default.createElement(YScaleBar_1.default, { model: self, orientation: "left" }))) : null));
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exports.renderSvg = renderSvg;
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@@ -3,6 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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exports.default = MultiDensityRendererF;
|
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|
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|
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@@ -14,4 +15,3 @@ function MultiDensityRendererF(pluginManager) {
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pluginManager,
|
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}));
|
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}
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|
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exports.default = MultiDensityRendererF;
|
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@@ -3,6 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
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|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
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|
};
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|
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|
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|
+
exports.default = MultiLineRendererF;
|
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|
const MultiWiggleRendering_1 = __importDefault(require("../MultiWiggleRendering"));
|
|
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|
const MultiLineRenderer_1 = __importDefault(require("./MultiLineRenderer"));
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|
const configSchema_1 = __importDefault(require("./configSchema"));
|
|
@@ -14,4 +15,3 @@ function MultiLineRendererF(pluginManager) {
|
|
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14
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|
pluginManager,
|
|
15
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|
}));
|
|
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|
}
|
|
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|
-
exports.default = MultiLineRendererF;
|
|
@@ -1,9 +1,32 @@
|
|
|
1
1
|
"use strict";
|
|
2
|
+
var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
|
|
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|
+
if (k2 === undefined) k2 = k;
|
|
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|
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var desc = Object.getOwnPropertyDescriptor(m, k);
|
|
5
|
+
if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
|
|
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|
+
desc = { enumerable: true, get: function() { return m[k]; } };
|
|
7
|
+
}
|
|
8
|
+
Object.defineProperty(o, k2, desc);
|
|
9
|
+
}) : (function(o, m, k, k2) {
|
|
10
|
+
if (k2 === undefined) k2 = k;
|
|
11
|
+
o[k2] = m[k];
|
|
12
|
+
}));
|
|
13
|
+
var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
|
|
14
|
+
Object.defineProperty(o, "default", { enumerable: true, value: v });
|
|
15
|
+
}) : function(o, v) {
|
|
16
|
+
o["default"] = v;
|
|
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|
+
});
|
|
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|
+
var __importStar = (this && this.__importStar) || function (mod) {
|
|
19
|
+
if (mod && mod.__esModule) return mod;
|
|
20
|
+
var result = {};
|
|
21
|
+
if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
|
|
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|
+
__setModuleDefault(result, mod);
|
|
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|
+
return result;
|
|
24
|
+
};
|
|
2
25
|
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
26
|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
27
|
};
|
|
5
28
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const react_1 =
|
|
29
|
+
const react_1 = __importStar(require("react"));
|
|
7
30
|
const material_1 = require("@mui/material");
|
|
8
31
|
const mobx_react_1 = require("mobx-react");
|
|
9
32
|
const mui_1 = require("tss-react/mui");
|
|
@@ -18,18 +41,19 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
|
|
|
18
41
|
color: theme.palette.grey[500],
|
|
19
42
|
},
|
|
20
43
|
}));
|
|
21
|
-
// draggable dialog demo https://mui.com/material-ui/react-dialog/#draggable-dialog
|
|
22
44
|
function PaperComponent(props) {
|
|
23
|
-
|
|
24
|
-
|
|
45
|
+
const ref = (0, react_1.useRef)(null);
|
|
46
|
+
return (react_1.default.createElement(react_draggable_1.default, { nodeRef: ref, cancel: '[class*="MuiDialogContent-root"]',
|
|
47
|
+
// @ts-expect-error
|
|
48
|
+
onStart: arg => { var _a, _b; return (_b = (_a = arg.target) === null || _a === void 0 ? void 0 : _a.className) === null || _b === void 0 ? void 0 : _b.includes('MuiDialogTitle'); } },
|
|
49
|
+
react_1.default.createElement(material_1.Paper, { ref: ref, ...props })));
|
|
25
50
|
}
|
|
26
51
|
const DraggableDialog = (0, mobx_react_1.observer)(function DraggableDialog(props) {
|
|
27
52
|
const { classes } = useStyles();
|
|
28
53
|
const { title, children, onClose } = props;
|
|
29
|
-
return (react_1.default.createElement(material_1.Dialog, { ...props, PaperComponent: PaperComponent,
|
|
30
|
-
},
|
|
54
|
+
return (react_1.default.createElement(material_1.Dialog, { ...props, PaperComponent: PaperComponent },
|
|
31
55
|
react_1.default.createElement(material_1.ScopedCssBaseline, null,
|
|
32
|
-
react_1.default.createElement(material_1.DialogTitle, { style: { cursor: 'move' }
|
|
56
|
+
react_1.default.createElement(material_1.DialogTitle, { style: { cursor: 'move' } },
|
|
33
57
|
title,
|
|
34
58
|
onClose ? (react_1.default.createElement(material_1.IconButton, { className: classes.closeButton, onClick: () => {
|
|
35
59
|
// @ts-expect-error
|
|
@@ -26,6 +26,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
26
26
|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
27
27
|
};
|
|
28
28
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
29
|
+
exports.default = SetColorDialog;
|
|
29
30
|
const react_1 = __importStar(require("react"));
|
|
30
31
|
const material_1 = require("@mui/material");
|
|
31
32
|
const mui_1 = require("tss-react/mui");
|
|
@@ -73,4 +74,3 @@ function SetColorDialog({ model, handleClose, }) {
|
|
|
73
74
|
handleClose();
|
|
74
75
|
} }, "Submit"))));
|
|
75
76
|
}
|
|
76
|
-
exports.default = SetColorDialog;
|
|
@@ -31,15 +31,15 @@ const material_1 = require("@mui/material");
|
|
|
31
31
|
const util_1 = require("@jbrowse/core/util");
|
|
32
32
|
const x_data_grid_1 = require("@mui/x-data-grid");
|
|
33
33
|
const mui_1 = require("tss-react/mui");
|
|
34
|
-
// locals
|
|
35
34
|
const ColorPicker_1 = __importStar(require("@jbrowse/core/ui/ColorPicker"));
|
|
35
|
+
const ui_1 = require("@jbrowse/core/ui");
|
|
36
|
+
// locals
|
|
36
37
|
const util_2 = require("./util");
|
|
37
38
|
// icons
|
|
38
39
|
const KeyboardDoubleArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowUp"));
|
|
39
40
|
const KeyboardDoubleArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowDown"));
|
|
40
41
|
const KeyboardArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardArrowDown"));
|
|
41
42
|
const KeyboardArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardArrowUp"));
|
|
42
|
-
const ui_1 = require("@jbrowse/core/ui");
|
|
43
43
|
const useStyles = (0, mui_1.makeStyles)()({
|
|
44
44
|
cell: {
|
|
45
45
|
whiteSpace: 'nowrap',
|
|
@@ -51,7 +51,6 @@ function SourcesGrid({ rows, onChange, showTips, }) {
|
|
|
51
51
|
const { classes } = useStyles();
|
|
52
52
|
const [anchorEl, setAnchorEl] = (0, react_1.useState)(null);
|
|
53
53
|
const [selected, setSelected] = (0, react_1.useState)([]);
|
|
54
|
-
// @ts-expect-error
|
|
55
54
|
const { name: _name, color: _color, baseUri: _baseUri, ...rest } = rows[0];
|
|
56
55
|
const [widgetColor, setWidgetColor] = (0, react_1.useState)('blue');
|
|
57
56
|
const [currSort, setCurrSort] = (0, react_1.useState)({
|
|
@@ -100,33 +99,29 @@ function SourcesGrid({ rows, onChange, showTips, }) {
|
|
|
100
99
|
},
|
|
101
100
|
{
|
|
102
101
|
field: 'name',
|
|
103
|
-
sortingOrder: [null],
|
|
104
102
|
headerName: 'Name',
|
|
105
103
|
width: (0, util_1.measureGridWidth)(rows.map(r => r.name)),
|
|
106
104
|
},
|
|
107
105
|
...Object.keys(rest).map(val => ({
|
|
108
106
|
field: val,
|
|
109
|
-
|
|
110
|
-
|
|
111
|
-
|
|
112
|
-
return (react_1.default.createElement("div", { className: classes.cell },
|
|
113
|
-
react_1.default.createElement(ui_1.SanitizedHTML, { html: (0, util_1.getStr)(value) })));
|
|
114
|
-
},
|
|
115
|
-
// @ts-ignore
|
|
116
|
-
width: (0, util_1.measureGridWidth)(rows.map(r => r[val])),
|
|
107
|
+
renderCell: ({ value }) => (react_1.default.createElement("div", { className: classes.cell },
|
|
108
|
+
react_1.default.createElement(ui_1.SanitizedHTML, { html: (0, util_1.getStr)(value) }))),
|
|
109
|
+
width: (0, util_1.measureGridWidth)(rows.map(r => `${r[val]}`)),
|
|
117
110
|
})),
|
|
118
111
|
], sortModel: [
|
|
119
112
|
/* we control the sort as a controlled component using onSortModelChange */
|
|
120
113
|
], onSortModelChange: args => {
|
|
121
114
|
const sort = args[0];
|
|
115
|
+
// this idx%2 flip flops the sorting order, we could inspect args
|
|
116
|
+
// for sort direction asc or desc but this is just a simplified
|
|
117
|
+
// thing since we are controlling sort instead of the default data
|
|
118
|
+
// grid sort anyways
|
|
122
119
|
const idx = (currSort.idx + 1) % 2;
|
|
123
120
|
const field = (sort === null || sort === void 0 ? void 0 : sort.field) || currSort.field;
|
|
124
121
|
setCurrSort({ idx, field });
|
|
125
122
|
onChange(field
|
|
126
123
|
? [...rows].sort((a, b) => {
|
|
127
|
-
// @ts-expect-error
|
|
128
124
|
const aa = (0, util_1.getStr)(a[field]);
|
|
129
|
-
// @ts-expect-error
|
|
130
125
|
const bb = (0, util_1.getStr)(b[field]);
|
|
131
126
|
return idx === 1
|
|
132
127
|
? aa.localeCompare(bb)
|
|
@@ -1,6 +1,8 @@
|
|
|
1
1
|
"use strict";
|
|
2
2
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
|
-
exports.
|
|
3
|
+
exports.moveUp = moveUp;
|
|
4
|
+
exports.moveDown = moveDown;
|
|
5
|
+
exports.getOffset = getOffset;
|
|
4
6
|
const util_1 = require("@jbrowse/core/util");
|
|
5
7
|
const configuration_1 = require("@jbrowse/core/configuration");
|
|
6
8
|
function moveUp(arr, sel, by = 1) {
|
|
@@ -17,7 +19,6 @@ function moveUp(arr, sel, by = 1) {
|
|
|
17
19
|
}
|
|
18
20
|
return arr;
|
|
19
21
|
}
|
|
20
|
-
exports.moveUp = moveUp;
|
|
21
22
|
function moveDown(arr, sel, by = 1) {
|
|
22
23
|
const idxs = sel
|
|
23
24
|
.map(l => arr.findIndex(v => v.name === l))
|
|
@@ -32,7 +33,6 @@ function moveDown(arr, sel, by = 1) {
|
|
|
32
33
|
}
|
|
33
34
|
return arr;
|
|
34
35
|
}
|
|
35
|
-
exports.moveDown = moveDown;
|
|
36
36
|
const trackLabelFontSize = 12.8;
|
|
37
37
|
function getOffset(model) {
|
|
38
38
|
const { prefersOffset } = model;
|
|
@@ -43,4 +43,3 @@ function getOffset(model) {
|
|
|
43
43
|
? (0, util_1.measureText)(trackName, trackLabelFontSize) + 100
|
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44
44
|
: 10;
|
|
45
45
|
}
|
|
46
|
-
exports.getOffset = getOffset;
|
|
@@ -26,6 +26,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
26
26
|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
27
27
|
};
|
|
28
28
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
29
|
+
exports.default = MultiLinearWiggleDisplayF;
|
|
29
30
|
const DisplayType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/DisplayType"));
|
|
30
31
|
const configSchema_1 = __importDefault(require("./models/configSchema"));
|
|
31
32
|
const model_1 = __importDefault(require("./models/model"));
|
|
@@ -44,4 +45,3 @@ function MultiLinearWiggleDisplayF(pluginManager) {
|
|
|
44
45
|
});
|
|
45
46
|
});
|
|
46
47
|
}
|
|
47
|
-
exports.default = MultiLinearWiggleDisplayF;
|
|
@@ -3,6 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
|
3
3
|
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
4
|
};
|
|
5
5
|
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
+
exports.default = WiggleConfigFactory;
|
|
6
7
|
const configuration_1 = require("@jbrowse/core/configuration");
|
|
7
8
|
const mobx_state_tree_1 = require("mobx-state-tree");
|
|
8
9
|
// locals
|
|
@@ -59,4 +60,3 @@ function WiggleConfigFactory(pluginManager) {
|
|
|
59
60
|
explicitlyTyped: true,
|
|
60
61
|
});
|
|
61
62
|
}
|
|
62
|
-
exports.default = WiggleConfigFactory;
|