@jbrowse/plugin-wiggle 1.7.8 → 1.7.11

package/dist/DensityRenderer/DensityRenderer.test.js

@@ -14,10 +14,14 @@ var _offscreenCanvasUtils = require("@jbrowse/core/util/offscreenCanvasUtils");
 
 var _ = _interopRequireWildcard(require("."));
 
+var _canvas = require("canvas");
+
 function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
 
 function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
 
+global.nodeImage = _canvas.Image;
+global.nodeCreateCanvas = _canvas.createCanvas;
 var pluginManager = {};
 var renderer = new _.default({
   name: 'DensityRenderer',

package/dist/LinePlotRenderer/configSchema.d.ts

@@ -1,2 +1,2 @@
-declare var _default: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+declare const _default: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
 export default _default;

package/dist/LinearWiggleDisplay/models/model.d.ts

@@ -137,7 +137,7 @@ declare const stateModelFactory: (pluginManager: PluginManager, configSchema: An
     estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
     estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
 } & {
-    readonly blockType: "staticBlocks" | "dynamicBlocks";
+    readonly blockType: "dynamicBlocks" | "staticBlocks";
     readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
 } & {
     readonly renderDelay: number;
@@ -219,12 +219,12 @@ declare const stateModelFactory: (pluginManager: PluginManager, configSchema: An
     setResolution(res: number): void;
     setFill(fill: boolean): void;
     toggleLogScale(): void;
-    setScaleType(scale?: string | undefined): void;
+    setScaleType(scale?: string): void;
     setSummaryScoreMode(val: string): void;
     setAutoscale(val: string): void;
-    setMaxScore(val?: number | undefined): void;
+    setMaxScore(val?: number): void;
     setRendererType(val: string): void;
-    setMinScore(val?: number | undefined): void;
+    setMinScore(val?: number): void;
     toggleCrossHatches(): void;
     setCrossHatches(cross: boolean): void;
 } & {

package/dist/LinearWiggleDisplay/models/model.js

@@ -207,12 +207,12 @@ var stateModelFactory = function stateModelFactory(pluginManager, configSchema)
 
       get maxScore() {
         var max = self.constraints.max;
-        return max !== undefined ? max : (0, _configuration.getConf)(self, 'maxScore');
+        return max !== null && max !== void 0 ? max : (0, _configuration.getConf)(self, 'maxScore');
       },
 
       get minScore() {
         var min = self.constraints.min;
-        return min !== undefined ? min : (0, _configuration.getConf)(self, 'minScore');
+        return min !== null && min !== void 0 ? min : (0, _configuration.getConf)(self, 'minScore');
       }
 
     };
@@ -239,7 +239,9 @@ var stateModelFactory = function stateModelFactory(pluginManager, configSchema)
     var oldDomain = [0, 0];
     return {
       get filled() {
-        return typeof self.fill !== 'undefined' ? self.fill : (0, _configuration.readConfObject)(self.rendererConfig, 'filled');
+        var _self$fill;
+
+        return (_self$fill = self.fill) !== null && _self$fill !== void 0 ? _self$fill : (0, _configuration.readConfObject)(self.rendererConfig, 'filled');
       },
 
       get summaryScoreModeSetting() {

package/dist/WiggleBaseRenderer.d.ts

@@ -24,11 +24,21 @@ export type { RenderArgsSerialized, RenderResults, ResultsSerialized, ResultsDes
 export default abstract class WiggleBaseRenderer extends FeatureRendererType {
     supportsSVG: boolean;
     render(renderProps: RenderArgsDeserialized): Promise<{
+        features: Map<string, Feature>;
+        containsNoTransferables: boolean;
+        height: number;
+        width: number;
+        canvasRecordedData: any;
+        reactElement?: import("react").ReactElement<any, string | import("react").JSXElementConstructor<any>> | undefined;
+        imageData?: undefined;
+        html?: string | undefined;
+    } | {
         features: Map<string, Feature>;
         containsNoTransferables: boolean;
         height: number;
         width: number;
         reactElement: JSX.Element;
+        canvasRecordedData?: undefined;
         imageData?: undefined;
         html?: string | undefined;
     } | {
@@ -36,7 +46,8 @@ export default abstract class WiggleBaseRenderer extends FeatureRendererType {
         containsNoTransferables: boolean;
         height: number;
         width: number;
-        imageData: import("@jbrowse/core/util/offscreenCanvas/types").AbstractImageBitmap;
+        imageData: any;
+        canvasRecordedData?: undefined;
         reactElement?: import("react").ReactElement<any, string | import("react").JSXElementConstructor<any>> | undefined;
         html?: string | undefined;
     }>;

package/dist/XYPlotRenderer/XYPlotRenderer.test.js

@@ -14,10 +14,14 @@ var _offscreenCanvasUtils = require("@jbrowse/core/util/offscreenCanvasUtils");
 
 var _ = _interopRequireWildcard(require("."));
 
+var _canvas = require("canvas");
+
 function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
 
 function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
 
+global.nodeImage = _canvas.Image;
+global.nodeCreateCanvas = _canvas.createCanvas;
 test('several features', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
   var pluginManager, renderer, renderProps, res;
   return _regenerator.default.wrap(function _callee$(_context) {

package/dist/index.d.ts

@@ -144,7 +144,7 @@ export default class WigglePlugin extends Plugin {
                 estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
                 estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
             } & {
-                readonly blockType: "staticBlocks" | "dynamicBlocks";
+                readonly blockType: "dynamicBlocks" | "staticBlocks";
                 readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
             } & {
                 readonly renderDelay: number;
@@ -415,7 +415,7 @@ export default class WigglePlugin extends Plugin {
                 estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
                 estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
             } & {
-                readonly blockType: "staticBlocks" | "dynamicBlocks";
+                readonly blockType: "dynamicBlocks" | "staticBlocks";
                 readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
             } & {
                 readonly renderDelay: number;
@@ -710,7 +710,7 @@ export default class WigglePlugin extends Plugin {
             estimatedRegionStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
             estimatedRegionStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
         } & {
-            readonly blockType: "staticBlocks" | "dynamicBlocks";
+            readonly blockType: "dynamicBlocks" | "staticBlocks";
             readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
         } & {
             readonly renderDelay: number;

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-wiggle",
-  "version": "1.7.8",
+  "version": "1.7.11",
   "description": "JBrowse 2 wiggle adapters, tracks, etc.",
   "keywords": [
     "jbrowse",
@@ -57,5 +57,5 @@
   "publishConfig": {
     "access": "public"
   },
-  "gitHead": "b429fa2bb5734fc8a5380988f6dfdd3f7a41a39f"
+  "gitHead": "5c21beb48a21f08b0091d293f09ac99174c48f77"
 }

package/src/DensityRenderer/DensityRenderer.test.js

@@ -2,6 +2,11 @@ import SimpleFeature from '@jbrowse/core/util/simpleFeature'
 import { renderToAbstractCanvas } from '@jbrowse/core/util/offscreenCanvasUtils'
 import DensityRenderer, { configSchema, ReactComponent } from '.'
 
+import { Image, createCanvas } from 'canvas'
+
+global.nodeImage = Image
+global.nodeCreateCanvas = createCanvas
+
 const pluginManager = {}
 const renderer = new DensityRenderer({
   name: 'DensityRenderer',

package/src/LinearWiggleDisplay/models/model.tsx

@@ -201,12 +201,12 @@ const stateModelFactory = (
 
       get maxScore() {
         const { max } = self.constraints
-        return max !== undefined ? max : getConf(self, 'maxScore')
+        return max ?? getConf(self, 'maxScore')
       },
 
       get minScore() {
         const { min } = self.constraints
-        return min !== undefined ? min : getConf(self, 'minScore')
+        return min ?? getConf(self, 'minScore')
       },
     }))
     .views(self => ({
@@ -233,9 +233,7 @@ const stateModelFactory = (
       let oldDomain: [number, number] = [0, 0]
       return {
         get filled() {
-          return typeof self.fill !== 'undefined'
-            ? self.fill
-            : readConfObject(self.rendererConfig, 'filled')
+          return self.fill ?? readConfObject(self.rendererConfig, 'filled')
         },
         get summaryScoreModeSetting() {
           return (

package/src/XYPlotRenderer/XYPlotRenderer.test.js

@@ -2,6 +2,11 @@ import SimpleFeature from '@jbrowse/core/util/simpleFeature'
 import { renderToAbstractCanvas } from '@jbrowse/core/util/offscreenCanvasUtils'
 import XYPlotRenderer, { configSchema, ReactComponent } from '.'
 
+import { Image, createCanvas } from 'canvas'
+
+global.nodeImage = Image
+global.nodeCreateCanvas = createCanvas
+
 test('several features', async () => {
   const pluginManager = {}
   const renderer = new XYPlotRenderer({