@jbrowse/plugin-variants 2.2.2 → 2.3.0

package/esm/ChordVariantDisplay/models/ChordVariantDisplay.d.ts

@@ -1,117 +0,0 @@
-/// <reference types="react" />
-import PluginManager from '@jbrowse/core/PluginManager';
-/**
- * #stateModel ChordVariantDisplay
- * extends `BaseChordDisplay`
- */
-declare const ChordVariantDisplayF: (pluginManager: PluginManager) => {
-    stateModel: import("mobx-state-tree").IModelType<{
-        id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-        type: import("mobx-state-tree").ISimpleType<string>;
-        rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-    } & {
-        bezierRadiusRatio: import("mobx-state-tree").IType<number | undefined, number, number>;
-        assemblyName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-    } & {
-        /**
-         * #property
-         */
-        type: import("mobx-state-tree").ISimpleType<"ChordVariantDisplay">;
-        /**
-         * #property
-         */
-        configuration: import("mobx-state-tree").ITypeUnion<any, any, any>;
-    }, {
-        rendererTypeName: string;
-        error: unknown;
-    } & {
-        readonly RenderingComponent: import("react").FC<{
-            model: {
-                id: string; /**
-                 * #property
-                 */
-                type: string;
-                rpcDriverName: string | undefined;
-            } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-                rendererTypeName: string;
-                error: unknown;
-            } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-                id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                type: import("mobx-state-tree").ISimpleType<string>;
-                rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-            }, {
-                rendererTypeName: string;
-                error: unknown;
-            }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-            onHorizontalScroll?: Function | undefined;
-            blockState?: Record<string, any> | undefined;
-        }>;
-        readonly DisplayBlurb: import("react").FC<{
-            model: {
-                id: string;
-                type: string;
-                rpcDriverName: string | undefined;
-            } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-                rendererTypeName: string;
-                error: unknown;
-            } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-                id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-                type: import("mobx-state-tree").ISimpleType<string>;
-                rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-            }, {
-                rendererTypeName: string;
-                error: unknown;
-            }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-        }> | null;
-        readonly adapterConfig: any;
-        readonly parentTrack: any;
-        renderProps(): any;
-        readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
-        readonly DisplayMessageComponent: import("react").FC<any> | undefined;
-        trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
-        readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
-        regionCannotBeRendered(): undefined;
-    } & {
-        setError(error?: unknown): void;
-        setRpcDriverName(rpcDriverName: string): void;
-        reload(): void;
-    } & {
-        filled: boolean;
-        reactElement: import("react").ReactElement<any, string | import("react").JSXElementConstructor<any>> | undefined;
-        data: undefined;
-        message: string;
-        renderingComponent: import("@jbrowse/core/util").AnyReactComponentType | undefined;
-        refNameMap: Record<string, string> | undefined;
-    } & {
-        onChordClick(feature: import("@jbrowse/core/util").Feature): void;
-    } & {
-        readonly blockDefinitions: any;
-        renderProps(): any;
-        readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
-        isCompatibleWithRenderer(renderer: import("@jbrowse/core/pluggableElementTypes").RendererType): boolean;
-        readonly selectedFeatureId: string | undefined;
-    } & {
-        renderStarted(): void;
-        renderSuccess({ message, data, reactElement, renderingComponent, }: {
-            message: string;
-            data: any;
-            reactElement: import("react").ReactElement<any, string | import("react").JSXElementConstructor<any>>;
-            renderingComponent: import("@jbrowse/core/util").AnyReactComponentType;
-        }): void;
-        renderError(error: unknown): void;
-        setRefNameMap(refNameMap: Record<string, string>): void;
-    } & {
-        afterAttach(): void;
-    } & {
-        /**
-         * #getter
-         */
-        readonly rendererTypeName: any;
-        /**
-         * #method
-         */
-        renderProps(): Record<string, unknown>;
-    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
-    configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
-};
-export default ChordVariantDisplayF;

package/esm/ChordVariantDisplay/models/ChordVariantDisplay.js

@@ -1,57 +0,0 @@
-import { BaseChordDisplayModel } from '@jbrowse/plugin-circular-view';
-import { ConfigurationReference } from '@jbrowse/core/configuration';
-import { types } from 'mobx-state-tree';
-import { getContainingView } from '@jbrowse/core/util';
-import { getParentRenderProps } from '@jbrowse/core/util/tracks';
-// locals
-import configSchemaF from './configSchema';
-/**
- * #stateModel ChordVariantDisplay
- * extends `BaseChordDisplay`
- */
-const ChordVariantDisplayF = (pluginManager) => {
-    const configSchema = configSchemaF(pluginManager);
-    const stateModel = types
-        .compose('ChordVariantDisplay', BaseChordDisplayModel, types.model({
-        /**
-         * #property
-         */
-        type: types.literal('ChordVariantDisplay'),
-        /**
-         * #property
-         */
-        configuration: ConfigurationReference(configSchema),
-    }))
-        .views(self => ({
-        /**
-         * #getter
-         */
-        get rendererTypeName() {
-            return self.configuration.renderer.type;
-        },
-        /**
-         * #method
-         */
-        renderProps() {
-            const view = getContainingView(self);
-            return {
-                ...getParentRenderProps(self),
-                rpcDriverName: self.rpcDriverName,
-                displayModel: self,
-                bezierRadius: view.radiusPx * self.bezierRadiusRatio,
-                radius: view.radiusPx,
-                // @ts-ignore
-                blockDefinitions: this.blockDefinitions,
-                config: self.configuration.renderer,
-                onChordClick: self.onChordClick,
-            };
-        },
-    }));
-    return { stateModel, configSchema };
-};
-// http://localhost:3000/test_data/hs37d5.HG002-SequelII-CCS.sv.vcf.gz.tbi
-// render request is for 1.5x the current viewing window
-// tracks all have a height
-//
-export default ChordVariantDisplayF;
-//# sourceMappingURL=ChordVariantDisplay.js.map

package/esm/ChordVariantDisplay/models/ChordVariantDisplay.js.map

@@ -1 +0,0 @@
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package/src/ChordVariantDisplay/models/ChordVariantDisplay.ts

@@ -1,69 +0,0 @@
-import { BaseChordDisplayModel } from '@jbrowse/plugin-circular-view'
-import { ConfigurationReference } from '@jbrowse/core/configuration'
-import { types } from 'mobx-state-tree'
-import { getContainingView } from '@jbrowse/core/util'
-import { getParentRenderProps } from '@jbrowse/core/util/tracks'
-import PluginManager from '@jbrowse/core/PluginManager'
-
-// locals
-import configSchemaF from './configSchema'
-
-/**
- * #stateModel ChordVariantDisplay
- * extends `BaseChordDisplay`
- */
-const ChordVariantDisplayF = (pluginManager: PluginManager) => {
-  const configSchema = configSchemaF(pluginManager)
-  const stateModel = types
-    .compose(
-      'ChordVariantDisplay',
-      BaseChordDisplayModel,
-      types.model({
-        /**
-         * #property
-         */
-        type: types.literal('ChordVariantDisplay'),
-        /**
-         * #property
-         */
-        configuration: ConfigurationReference(configSchema),
-      }),
-    )
-    .views(self => ({
-      /**
-       * #getter
-       */
-      get rendererTypeName() {
-        return self.configuration.renderer.type
-      },
-
-      /**
-       * #method
-       */
-      renderProps(): Record<string, unknown> {
-        const view = getContainingView(self)
-        return {
-          ...getParentRenderProps(self),
-          rpcDriverName: self.rpcDriverName,
-          displayModel: self,
-          bezierRadius: view.radiusPx * self.bezierRadiusRatio,
-          radius: view.radiusPx,
-
-          // @ts-ignore
-          blockDefinitions: this.blockDefinitions,
-          config: self.configuration.renderer,
-          onChordClick: self.onChordClick,
-        }
-      },
-    }))
-
-  return { stateModel, configSchema }
-}
-
-// http://localhost:3000/test_data/hs37d5.HG002-SequelII-CCS.sv.vcf.gz.tbi
-
-// render request is for 1.5x the current viewing window
-
-// tracks all have a height
-//
-export default ChordVariantDisplayF