@jbrowse/plugin-variants 1.5.3 → 1.5.7
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/LinearVariantDisplay/model.d.ts +1 -1
- package/dist/VcfTabixAdapter/VcfTabixAdapter.d.ts +2 -2
- package/dist/plugin-variants.cjs.development.js +27 -31
- package/dist/plugin-variants.cjs.development.js.map +1 -1
- package/dist/plugin-variants.cjs.production.min.js +1 -1
- package/dist/plugin-variants.cjs.production.min.js.map +1 -1
- package/dist/plugin-variants.esm.js +27 -31
- package/dist/plugin-variants.esm.js.map +1 -1
- package/package.json +5 -5
- package/src/VariantFeatureWidget/VariantFeatureWidget.tsx +1 -1
- package/src/VariantFeatureWidget/__snapshots__/VariantFeatureWidget.test.js.snap +1 -0
- package/src/VcfAdapter/VcfAdapter.ts +1 -1
- package/src/VcfTabixAdapter/VcfTabixAdapter.ts +1 -1
- package/src/declare.d.ts +0 -2
package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@jbrowse/plugin-variants",
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-
"version": "1.5.
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+
"version": "1.5.7",
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"description": "JBrowse 2 variant adapters, tracks, etc.",
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"keywords": [
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"jbrowse",
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@@ -35,10 +35,10 @@
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"useSrc": "node ../../scripts/useSrc.js"
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},
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"dependencies": {
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-
"@flatten-js/interval-tree": "^1.0.
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-
"@gmod/bgzf-filehandle": "^1.4.
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"@flatten-js/interval-tree": "^1.0.15",
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"@gmod/bgzf-filehandle": "^1.4.2",
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"@gmod/tabix": "^1.5.2",
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-
"@gmod/vcf": "^5.0.
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"@gmod/vcf": "^5.0.4",
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"@material-ui/icons": "^4.11.2",
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"@mui/x-data-grid": "^4.0.1",
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"generic-filehandle": "^2.2.2"
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@@ -58,5 +58,5 @@
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"publishConfig": {
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"access": "public"
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},
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-
"gitHead": "
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"gitHead": "b9b69276a6760ca01c7c7d905e2172b4adf9df8d"
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}
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@@ -225,7 +225,7 @@ function VariantFeatureDetails(props: any) {
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<BreakendPanel
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feature={feat}
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locStrings={feat.ALT.map(
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-
(alt: string) => parseBreakend(alt)
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(alt: string) => parseBreakend(alt)?.MatePosition || '',
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)}
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model={model}
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/>
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@@ -56,7 +56,7 @@ export default class VcfAdapter extends BaseFeatureDataAdapter {
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this.pluginManager,
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).readFile()
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const buf = isGzip(buffer
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const buf = isGzip(buffer) ? await unzip(buffer) : buffer
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// 512MB max chrome string length is 512MB
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if (buf.length > 536_870_888) {
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package/src/declare.d.ts
DELETED