@jbrowse/plugin-trix 3.1.0 → 3.3.0

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@@ -5,7 +5,6 @@ declare const TrixTextSearchAdapter: import("@jbrowse/core/configuration/configu
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  uri: string;
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  locationType: string;
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  };
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- description: string;
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  };
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  ixxFilePath: {
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  type: string;
@@ -13,7 +12,6 @@ declare const TrixTextSearchAdapter: import("@jbrowse/core/configuration/configu
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  uri: string;
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  locationType: string;
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  };
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- description: string;
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  };
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  metaFilePath: {
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  type: string;
@@ -21,7 +19,6 @@ declare const TrixTextSearchAdapter: import("@jbrowse/core/configuration/configu
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  uri: string;
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  locationType: string;
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  };
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- description: string;
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  };
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  tracks: {
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  type: string;
@@ -5,18 +5,24 @@ function x() { }
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  const TrixTextSearchAdapter = (0, configuration_1.ConfigurationSchema)('TrixTextSearchAdapter', {
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  ixFilePath: {
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  type: 'fileLocation',
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- defaultValue: { uri: 'out.ix', locationType: 'UriLocation' },
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- description: 'the location of the trix ix file',
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+ defaultValue: {
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+ uri: 'out.ix',
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+ locationType: 'UriLocation',
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+ },
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  },
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  ixxFilePath: {
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  type: 'fileLocation',
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- defaultValue: { uri: 'out.ixx', locationType: 'UriLocation' },
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- description: 'the location of the trix ixx file',
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+ defaultValue: {
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+ uri: 'out.ixx',
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+ locationType: 'UriLocation',
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+ },
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  },
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  metaFilePath: {
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  type: 'fileLocation',
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- defaultValue: { uri: 'meta.json', locationType: 'UriLocation' },
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- description: 'the location of the metadata json file for the trix index',
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+ defaultValue: {
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+ uri: 'meta.json',
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+ locationType: 'UriLocation',
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+ },
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  },
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  tracks: {
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  type: 'stringArray',
@@ -31,5 +37,20 @@ const TrixTextSearchAdapter = (0, configuration_1.ConfigurationSchema)('TrixText
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  }, {
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  explicitlyTyped: true,
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  explicitIdentifier: 'textSearchAdapterId',
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+ preProcessSnapshot: snap => {
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+ return snap.uri
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+ ? {
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+ ...snap,
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+ ixFilePath: {
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+ uri: snap.uri,
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+ baseUri: snap.baseUri,
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+ },
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+ ixxFilePath: {
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+ uri: `${snap.uri}x`,
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+ baseUri: snap.baseUri,
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+ },
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+ }
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+ : snap;
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+ },
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  });
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  exports.default = TrixTextSearchAdapter;
@@ -5,7 +5,6 @@ declare const TrixTextSearchAdapter: import("@jbrowse/core/configuration/configu
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  uri: string;
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  locationType: string;
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  };
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- description: string;
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  };
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  ixxFilePath: {
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  type: string;
@@ -13,7 +12,6 @@ declare const TrixTextSearchAdapter: import("@jbrowse/core/configuration/configu
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  uri: string;
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  locationType: string;
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  };
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- description: string;
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  };
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  metaFilePath: {
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  type: string;
@@ -21,7 +19,6 @@ declare const TrixTextSearchAdapter: import("@jbrowse/core/configuration/configu
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  uri: string;
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  locationType: string;
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  };
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- description: string;
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  };
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  tracks: {
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  type: string;
@@ -3,18 +3,24 @@ function x() { }
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  const TrixTextSearchAdapter = ConfigurationSchema('TrixTextSearchAdapter', {
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  ixFilePath: {
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  type: 'fileLocation',
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- defaultValue: { uri: 'out.ix', locationType: 'UriLocation' },
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- description: 'the location of the trix ix file',
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+ defaultValue: {
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+ uri: 'out.ix',
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+ locationType: 'UriLocation',
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+ },
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  },
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  ixxFilePath: {
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  type: 'fileLocation',
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- defaultValue: { uri: 'out.ixx', locationType: 'UriLocation' },
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- description: 'the location of the trix ixx file',
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+ defaultValue: {
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+ uri: 'out.ixx',
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+ locationType: 'UriLocation',
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+ },
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  },
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  metaFilePath: {
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  type: 'fileLocation',
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- defaultValue: { uri: 'meta.json', locationType: 'UriLocation' },
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- description: 'the location of the metadata json file for the trix index',
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+ defaultValue: {
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+ uri: 'meta.json',
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+ locationType: 'UriLocation',
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+ },
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  },
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  tracks: {
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  type: 'stringArray',
@@ -29,5 +35,20 @@ const TrixTextSearchAdapter = ConfigurationSchema('TrixTextSearchAdapter', {
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  }, {
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  explicitlyTyped: true,
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  explicitIdentifier: 'textSearchAdapterId',
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+ preProcessSnapshot: snap => {
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+ return snap.uri
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+ ? {
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+ ...snap,
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+ ixFilePath: {
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+ uri: snap.uri,
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+ baseUri: snap.baseUri,
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+ },
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+ ixxFilePath: {
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+ uri: `${snap.uri}x`,
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+ baseUri: snap.baseUri,
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+ },
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+ }
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+ : snap;
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+ },
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  });
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  export default TrixTextSearchAdapter;
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@jbrowse/plugin-trix",
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- "version": "3.1.0",
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+ "version": "3.3.0",
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  "description": "JBrowse 2 trix text search adapter",
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  "keywords": [
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  "jbrowse",
@@ -40,8 +40,8 @@
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  },
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  "dependencies": {
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  "@gmod/trix": "^3.0.2",
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- "@jbrowse/core": "^3.1.0",
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- "@mui/material": "^6.0.0",
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+ "@jbrowse/core": "^3.3.0",
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+ "@mui/material": "^7.0.0",
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  "mobx": "^6.0.0",
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  "mobx-react": "^9.0.0",
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  "mobx-state-tree": "^5.0.0"
@@ -52,5 +52,5 @@
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  "distModule": "esm/index.js",
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  "srcModule": "src/index.ts",
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  "module": "esm/index.js",
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- "gitHead": "91492049ddea0aed90eb24d3c066c2d9f5a6b189"
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+ "gitHead": "0bb64d8cc7ecdd167515308b31eec3d9acbc59e4"
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  }