@jbrowse/plugin-sv-inspector 3.5.0 → 3.6.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (3) hide show
  1. package/dist/SvInspectorView/model.d.ts +12 -20
  2. package/esm/SvInspectorView/model.d.ts +12 -20
  3. package/package.json +6 -6
package/dist/SvInspectorView/model.d.ts CHANGED
@@ -447,18 +447,18 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  refNameAliases: {
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  [x: string]: string;
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  } | undefined;
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- lowerCaseRefNameAliases: {
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- [x: string]: string;
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- } | undefined;
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  cytobands: import("@jbrowse/core/util").Feature[] | undefined;
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  } & {
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  getConf(arg: string): any;
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+ readonly lowerCaseRefNameAliases: {
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+ [k: string]: string;
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+ } | undefined;
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  } & {
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  readonly initialized: boolean;
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  readonly name: string;
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  readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
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  readonly aliases: string[];
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- readonly displayName: string | undefined;
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+ readonly displayName: string;
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  hasName(name: string): boolean;
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  readonly allAliases: string[];
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  readonly allRefNames: string[] | undefined;
@@ -473,22 +473,17 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  getRefNameColor(refName: string): string | undefined;
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  isValidRefName(refName: string): boolean;
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  } & {
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- setLoaded({ regions, refNameAliases, lowerCaseRefNameAliases, cytobands, }: {
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+ setLoaded({ regions, refNameAliases, cytobands, }: {
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  regions: import("@jbrowse/core/util").Region[];
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  refNameAliases: {
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  [x: string]: string;
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  };
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- lowerCaseRefNameAliases: {
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- [x: string]: string;
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- };
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  cytobands: import("@jbrowse/core/util").Feature[];
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  }): void;
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  setError(e: unknown): void;
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  setRegions(regions: import("@jbrowse/core/util").Region[]): void;
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  setRefNameAliases(aliases: {
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  [x: string]: string;
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- }, lowerCaseAliases: {
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- [x: string]: string;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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  setLoadingP(p?: Promise<void>): void;
@@ -508,6 +503,7 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
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  [x: string]: string;
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  }>;
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+ afterCreate(): void;
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  } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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  configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
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  }, {
@@ -517,18 +513,18 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  refNameAliases: {
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  [x: string]: string;
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  } | undefined;
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- lowerCaseRefNameAliases: {
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- [x: string]: string;
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- } | undefined;
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  cytobands: import("@jbrowse/core/util").Feature[] | undefined;
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  } & {
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  getConf(arg: string): any;
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+ readonly lowerCaseRefNameAliases: {
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+ [k: string]: string;
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+ } | undefined;
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  } & {
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  readonly initialized: boolean;
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  readonly name: string;
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  readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
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  readonly aliases: string[];
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- readonly displayName: string | undefined;
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+ readonly displayName: string;
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  hasName(name: string): boolean;
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  readonly allAliases: string[];
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  readonly allRefNames: string[] | undefined;
@@ -543,22 +539,17 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  getRefNameColor(refName: string): string | undefined;
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  isValidRefName(refName: string): boolean;
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  } & {
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- setLoaded({ regions, refNameAliases, lowerCaseRefNameAliases, cytobands, }: {
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+ setLoaded({ regions, refNameAliases, cytobands, }: {
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  regions: import("@jbrowse/core/util").Region[];
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  refNameAliases: {
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  [x: string]: string;
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  };
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- lowerCaseRefNameAliases: {
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- [x: string]: string;
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- };
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  cytobands: import("@jbrowse/core/util").Feature[];
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  }): void;
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  setError(e: unknown): void;
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  setRegions(regions: import("@jbrowse/core/util").Region[]): void;
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  setRefNameAliases(aliases: {
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  [x: string]: string;
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- }, lowerCaseAliases: {
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- [x: string]: string;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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  setLoadingP(p?: Promise<void>): void;
@@ -578,6 +569,7 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
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  [x: string]: string;
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  }>;
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+ afterCreate(): void;
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  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
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  readonly canonicalFeatureRefNameSet: Set<any>;
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  readonly featuresCircularTrackConfiguration: {
package/esm/SvInspectorView/model.d.ts CHANGED
@@ -447,18 +447,18 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  refNameAliases: {
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  [x: string]: string;
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  } | undefined;
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- lowerCaseRefNameAliases: {
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- [x: string]: string;
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- } | undefined;
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  cytobands: import("@jbrowse/core/util").Feature[] | undefined;
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  } & {
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  getConf(arg: string): any;
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+ readonly lowerCaseRefNameAliases: {
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+ [k: string]: string;
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+ } | undefined;
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  } & {
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  readonly initialized: boolean;
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  readonly name: string;
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  readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
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  readonly aliases: string[];
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- readonly displayName: string | undefined;
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+ readonly displayName: string;
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  hasName(name: string): boolean;
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  readonly allAliases: string[];
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  readonly allRefNames: string[] | undefined;
@@ -473,22 +473,17 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  getRefNameColor(refName: string): string | undefined;
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  isValidRefName(refName: string): boolean;
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  } & {
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- setLoaded({ regions, refNameAliases, lowerCaseRefNameAliases, cytobands, }: {
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+ setLoaded({ regions, refNameAliases, cytobands, }: {
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  regions: import("@jbrowse/core/util").Region[];
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  refNameAliases: {
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  [x: string]: string;
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  };
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- lowerCaseRefNameAliases: {
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- [x: string]: string;
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- };
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  cytobands: import("@jbrowse/core/util").Feature[];
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  }): void;
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  setError(e: unknown): void;
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  setRegions(regions: import("@jbrowse/core/util").Region[]): void;
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  setRefNameAliases(aliases: {
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  [x: string]: string;
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- }, lowerCaseAliases: {
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- [x: string]: string;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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  setLoadingP(p?: Promise<void>): void;
@@ -508,6 +503,7 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
508
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  }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
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  [x: string]: string;
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  }>;
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+ afterCreate(): void;
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  } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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  configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
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  }, {
@@ -517,18 +513,18 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  refNameAliases: {
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  [x: string]: string;
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  } | undefined;
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- lowerCaseRefNameAliases: {
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- [x: string]: string;
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- } | undefined;
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  cytobands: import("@jbrowse/core/util").Feature[] | undefined;
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  } & {
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  getConf(arg: string): any;
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+ readonly lowerCaseRefNameAliases: {
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+ [k: string]: string;
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+ } | undefined;
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  } & {
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  readonly initialized: boolean;
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  readonly name: string;
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  readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
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  readonly aliases: string[];
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- readonly displayName: string | undefined;
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+ readonly displayName: string;
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  hasName(name: string): boolean;
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  readonly allAliases: string[];
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  readonly allRefNames: string[] | undefined;
@@ -543,22 +539,17 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  getRefNameColor(refName: string): string | undefined;
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  isValidRefName(refName: string): boolean;
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  } & {
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- setLoaded({ regions, refNameAliases, lowerCaseRefNameAliases, cytobands, }: {
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+ setLoaded({ regions, refNameAliases, cytobands, }: {
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  regions: import("@jbrowse/core/util").Region[];
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  refNameAliases: {
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  [x: string]: string;
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  };
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- lowerCaseRefNameAliases: {
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- [x: string]: string;
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- };
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  cytobands: import("@jbrowse/core/util").Feature[];
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  }): void;
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  setError(e: unknown): void;
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  setRegions(regions: import("@jbrowse/core/util").Region[]): void;
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  setRefNameAliases(aliases: {
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  [x: string]: string;
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- }, lowerCaseAliases: {
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- [x: string]: string;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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  setLoadingP(p?: Promise<void>): void;
@@ -578,6 +569,7 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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  }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
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  [x: string]: string;
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  }>;
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+ afterCreate(): void;
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  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
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  readonly canonicalFeatureRefNameSet: Set<any>;
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  readonly featuresCircularTrackConfiguration: {
package/package.json CHANGED
@@ -1,6 +1,6 @@
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  {
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  "name": "@jbrowse/plugin-sv-inspector",
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- "version": "3.5.0",
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+ "version": "3.6.0",
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  "description": "JBrowse 2 SV inspector view",
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  "keywords": [
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  "jbrowse",
@@ -36,10 +36,10 @@
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  "clean": "rimraf dist esm *.tsbuildinfo"
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  },
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  "dependencies": {
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- "@jbrowse/core": "^3.5.0",
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- "@jbrowse/plugin-circular-view": "^3.5.0",
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- "@jbrowse/plugin-spreadsheet-view": "^3.5.0",
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- "@jbrowse/sv-core": "^3.5.0",
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+ "@jbrowse/core": "^3.6.0",
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+ "@jbrowse/plugin-circular-view": "^3.6.0",
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+ "@jbrowse/plugin-spreadsheet-view": "^3.6.0",
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+ "@jbrowse/sv-core": "^3.6.0",
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  "@mui/icons-material": "^7.0.0",
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  "@mui/material": "^7.0.0",
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  "mobx": "^6.0.0",
@@ -57,5 +57,5 @@
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  "publishConfig": {
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  "access": "public"
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  },
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- "gitHead": "8a8aa0aab2229dece106a5715a767e649e2fe92b"
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+ "gitHead": "133a68815ab348d156c18d83cffc997356c3cfbb"
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  }