@jbrowse/plugin-sv-inspector 2.9.0 → 2.10.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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@@ -5,7 +5,12 @@ import { Region } from '@jbrowse/core/util';
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/**
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* #stateModel SvInspectorView
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* #category view
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*
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* does not extend, but is a combination of a
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* - [SpreadsheetView](../spreadsheetview)
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* - [CircularView](../circularview)
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*
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* extends
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* - [BaseViewModel](../baseviewmodel)
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*/
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declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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@@ -44,18 +49,11 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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columnFilters: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
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}, {
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readonly filters: any[];
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-
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* #property
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*/
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setRowFullTextFilter(stringToFind: string): void; /**
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* #property
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*/
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setRowFullTextFilter(stringToFind: string): void;
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rowPassesFilters(sheet: unknown, row: unknown): boolean;
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} & {
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addBlankColumnFilter(columnNumber: number): void;
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removeColumnFilter(filter: import("mobx-state-tree").IAnyType): boolean;
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* #property
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*/
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removeColumnFilter(filter: import("mobx-state-tree").IAnyType): boolean;
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clearAllFilters(): void;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
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mode: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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@@ -68,14 +66,12 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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fileTypes: string[];
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fileSource: any;
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error: unknown;
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loading: boolean;
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} & {
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readonly isReadyToOpen: any;
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readonly canCancel: any; /**
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loading: boolean; /**
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* #property
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* switch specifying whether we are showing the import wizard or the
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* spreadsheet in our viewing area
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*/
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} & {
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readonly isReadyToOpen: any;
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readonly canCancel: any;
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readonly fileName: any;
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readonly requiresUnzip: any;
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isValidRefName(refName: string, assemblyName?: string | undefined): boolean;
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@@ -671,18 +667,14 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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setMinimized(flag: boolean): void;
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} & {
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volatileWidth: number | undefined;
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error: unknown;
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* #getter
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*/
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error: unknown;
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} & {
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readonly width: number;
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readonly visibleSection: {
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rho: [number, number];
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theta: [number, number];
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};
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readonly circumferencePx: number;
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* #getter
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*/
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readonly circumferencePx: number;
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readonly radiusPx: number;
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readonly bpPerRadian: number;
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readonly pxPerRadian: number;
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@@ -697,9 +689,6 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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readonly figureDimensions: [number, number];
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readonly figureWidth: number;
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readonly figureHeight: number;
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/**
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* #action
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*/
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readonly elidedRegions: import("@jbrowse/plugin-circular-view/src/CircularView/models/slices").SliceRegion[];
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readonly assemblyNames: string[];
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readonly initialized: boolean;
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@@ -742,7 +731,7 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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} & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>, initialSnapshot?: {}): void;
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hideTrack(trackId: string): number;
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toggleFitToWindowLock(): boolean;
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exportSvg(opts?: import("@jbrowse/plugin-circular-view/src/CircularView/models/
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734
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exportSvg(opts?: import("@jbrowse/plugin-circular-view/src/CircularView/models/model").ExportSvgOptions): Promise<void>;
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} & {
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menuItems(): import("@jbrowse/core/ui").MenuItem[];
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
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@@ -18,7 +18,12 @@ const breakpointSplitViewFromTableRow_1 = require("./breakpointSplitViewFromTabl
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/**
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* #stateModel SvInspectorView
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* #category view
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21
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-
*
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+
* does not extend, but is a combination of a
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* - [SpreadsheetView](../spreadsheetview)
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* - [CircularView](../circularview)
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*
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* extends
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* - [BaseViewModel](../baseviewmodel)
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*/
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function SvInspectorViewF(pluginManager) {
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const SpreadsheetViewType = pluginManager.getViewType('SpreadsheetView');
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@@ -5,7 +5,12 @@ import { Region } from '@jbrowse/core/util';
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5
5
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/**
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6
6
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* #stateModel SvInspectorView
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7
7
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* #category view
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8
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-
*
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8
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+
* does not extend, but is a combination of a
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9
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+
* - [SpreadsheetView](../spreadsheetview)
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10
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+
* - [CircularView](../circularview)
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+
*
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+
* extends
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+
* - [BaseViewModel](../baseviewmodel)
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9
14
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*/
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10
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declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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@@ -44,18 +49,11 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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columnFilters: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
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45
50
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}, {
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46
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readonly filters: any[];
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47
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-
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48
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-
* #property
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49
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-
*/
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50
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-
setRowFullTextFilter(stringToFind: string): void; /**
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51
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-
* #property
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52
|
-
*/
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52
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+
setRowFullTextFilter(stringToFind: string): void;
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53
53
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rowPassesFilters(sheet: unknown, row: unknown): boolean;
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54
54
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} & {
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55
55
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addBlankColumnFilter(columnNumber: number): void;
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56
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-
removeColumnFilter(filter: import("mobx-state-tree").IAnyType): boolean;
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57
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-
* #property
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58
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-
*/
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56
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+
removeColumnFilter(filter: import("mobx-state-tree").IAnyType): boolean;
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57
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clearAllFilters(): void;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
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59
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mode: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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@@ -68,14 +66,12 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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68
66
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fileTypes: string[];
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69
67
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fileSource: any;
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70
68
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error: unknown;
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71
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-
loading: boolean;
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72
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-
} & {
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73
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-
readonly isReadyToOpen: any;
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74
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-
readonly canCancel: any; /**
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69
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+
loading: boolean; /**
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75
70
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* #property
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76
|
-
* switch specifying whether we are showing the import wizard or the
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77
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-
* spreadsheet in our viewing area
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78
71
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*/
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72
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+
} & {
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73
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readonly isReadyToOpen: any;
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74
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+
readonly canCancel: any;
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readonly fileName: any;
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76
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readonly requiresUnzip: any;
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77
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isValidRefName(refName: string, assemblyName?: string | undefined): boolean;
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@@ -671,18 +667,14 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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671
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setMinimized(flag: boolean): void;
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672
668
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} & {
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673
669
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volatileWidth: number | undefined;
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674
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-
error: unknown;
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675
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-
* #getter
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676
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-
*/
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670
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+
error: unknown;
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677
671
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} & {
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678
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readonly width: number;
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679
673
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readonly visibleSection: {
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680
674
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rho: [number, number];
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681
675
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theta: [number, number];
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682
676
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};
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683
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-
readonly circumferencePx: number;
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684
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-
* #getter
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685
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-
*/
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677
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+
readonly circumferencePx: number;
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686
678
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readonly radiusPx: number;
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687
679
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readonly bpPerRadian: number;
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688
680
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readonly pxPerRadian: number;
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@@ -697,9 +689,6 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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697
689
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readonly figureDimensions: [number, number];
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698
690
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readonly figureWidth: number;
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699
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readonly figureHeight: number;
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700
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-
/**
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701
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-
* #action
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702
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-
*/
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703
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readonly elidedRegions: import("@jbrowse/plugin-circular-view/src/CircularView/models/slices").SliceRegion[];
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readonly assemblyNames: string[];
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readonly initialized: boolean;
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@@ -742,7 +731,7 @@ declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-st
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} & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>, initialSnapshot?: {}): void;
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743
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hideTrack(trackId: string): number;
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744
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toggleFitToWindowLock(): boolean;
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745
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-
exportSvg(opts?: import("@jbrowse/plugin-circular-view/src/CircularView/models/
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734
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exportSvg(opts?: import("@jbrowse/plugin-circular-view/src/CircularView/models/model").ExportSvgOptions): Promise<void>;
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746
735
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} & {
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747
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menuItems(): import("@jbrowse/core/ui").MenuItem[];
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
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@@ -13,7 +13,12 @@ import { canOpenBreakpointSplitViewFromTableRow, openBreakpointSplitViewFromTabl
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/**
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* #stateModel SvInspectorView
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15
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* #category view
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16
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-
*
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16
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+
* does not extend, but is a combination of a
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17
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+
* - [SpreadsheetView](../spreadsheetview)
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18
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+
* - [CircularView](../circularview)
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+
*
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+
* extends
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+
* - [BaseViewModel](../baseviewmodel)
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*/
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function SvInspectorViewF(pluginManager) {
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const SpreadsheetViewType = pluginManager.getViewType('SpreadsheetView');
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package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@jbrowse/plugin-sv-inspector",
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"version": "2.
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"version": "2.10.0",
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"description": "JBrowse 2 SV inspector view",
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"keywords": [
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"jbrowse",
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@@ -57,5 +57,5 @@
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"publishConfig": {
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"access": "public"
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},
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"gitHead": "
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"gitHead": "223d8bfb68fd1bacaf22852639ad5920f1b7f43b"
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}
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