@jbrowse/plugin-sv-inspector 2.6.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/LICENSE +201 -0
- package/dist/LaunchSvInspectorView/index.d.ts +3 -0
- package/dist/LaunchSvInspectorView/index.js +27 -0
- package/dist/LaunchSvInspectorView/index.js.map +1 -0
- package/dist/SvInspectorView/components/CircularViewOptions.d.ts +6 -0
- package/dist/SvInspectorView/components/CircularViewOptions.js +22 -0
- package/dist/SvInspectorView/components/CircularViewOptions.js.map +1 -0
- package/dist/SvInspectorView/components/SvInspectorView.d.ts +6 -0
- package/dist/SvInspectorView/components/SvInspectorView.js +51 -0
- package/dist/SvInspectorView/components/SvInspectorView.js.map +1 -0
- package/dist/SvInspectorView/index.d.ts +3 -0
- package/dist/SvInspectorView/index.js +35 -0
- package/dist/SvInspectorView/index.js.map +1 -0
- package/dist/SvInspectorView/models/SvInspectorView.d.ts +881 -0
- package/dist/SvInspectorView/models/SvInspectorView.js +317 -0
- package/dist/SvInspectorView/models/SvInspectorView.js.map +1 -0
- package/dist/SvInspectorView/models/adhocFeatureUtils.d.ts +44 -0
- package/dist/SvInspectorView/models/adhocFeatureUtils.js +97 -0
- package/dist/SvInspectorView/models/adhocFeatureUtils.js.map +1 -0
- package/dist/SvInspectorView/models/breakpointSplitViewFromTableRow.d.ts +4 -0
- package/dist/SvInspectorView/models/breakpointSplitViewFromTableRow.js +49 -0
- package/dist/SvInspectorView/models/breakpointSplitViewFromTableRow.js.map +1 -0
- package/dist/index.d.ts +7 -0
- package/dist/index.js +35 -0
- package/dist/index.js.map +1 -0
- package/esm/LaunchSvInspectorView/index.d.ts +3 -0
- package/esm/LaunchSvInspectorView/index.js +25 -0
- package/esm/LaunchSvInspectorView/index.js.map +1 -0
- package/esm/SvInspectorView/components/CircularViewOptions.d.ts +6 -0
- package/esm/SvInspectorView/components/CircularViewOptions.js +17 -0
- package/esm/SvInspectorView/components/CircularViewOptions.js.map +1 -0
- package/esm/SvInspectorView/components/SvInspectorView.d.ts +6 -0
- package/esm/SvInspectorView/components/SvInspectorView.js +46 -0
- package/esm/SvInspectorView/components/SvInspectorView.js.map +1 -0
- package/esm/SvInspectorView/index.d.ts +3 -0
- package/esm/SvInspectorView/index.js +30 -0
- package/esm/SvInspectorView/index.js.map +1 -0
- package/esm/SvInspectorView/models/SvInspectorView.d.ts +881 -0
- package/esm/SvInspectorView/models/SvInspectorView.js +312 -0
- package/esm/SvInspectorView/models/SvInspectorView.js.map +1 -0
- package/esm/SvInspectorView/models/adhocFeatureUtils.d.ts +44 -0
- package/esm/SvInspectorView/models/adhocFeatureUtils.js +90 -0
- package/esm/SvInspectorView/models/adhocFeatureUtils.js.map +1 -0
- package/esm/SvInspectorView/models/breakpointSplitViewFromTableRow.d.ts +4 -0
- package/esm/SvInspectorView/models/breakpointSplitViewFromTableRow.js +42 -0
- package/esm/SvInspectorView/models/breakpointSplitViewFromTableRow.js.map +1 -0
- package/esm/index.d.ts +7 -0
- package/esm/index.js +29 -0
- package/esm/index.js.map +1 -0
- package/package.json +62 -0
- package/src/LaunchSvInspectorView/index.ts +41 -0
- package/src/SvInspectorView/components/CircularViewOptions.tsx +47 -0
- package/src/SvInspectorView/components/SvInspectorView.tsx +81 -0
- package/src/SvInspectorView/index.ts +41 -0
- package/src/SvInspectorView/models/SvInspectorView.ts +406 -0
- package/src/SvInspectorView/models/adhocFeatureUtils.js +152 -0
- package/src/SvInspectorView/models/breakpointSplitViewFromTableRow.js +84 -0
- package/src/index.ts +34 -0
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/// <reference types="react" />
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import { Instance } from 'mobx-state-tree';
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import PluginManager from '@jbrowse/core/PluginManager';
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import { Region } from '@jbrowse/core/util';
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/**
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* #stateModel SvInspectorView
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* #category view
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* combination of a spreadsheetview and a circularview
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*/
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declare function SvInspectorViewF(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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minimized: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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} & {
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("mobx-state-tree").ISimpleType<"SvInspectorView">;
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height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
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onlyDisplayRelevantRegionsInCircularView: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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mode: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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spreadsheetView: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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minimized: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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} & {
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type: import("mobx-state-tree").ISimpleType<"SpreadsheetView">;
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offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
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height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
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hideVerticalResizeHandle: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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hideFilterControls: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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filterControls: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
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rowFullText: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
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type: import("mobx-state-tree").ISimpleType<"RowFullText">;
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stringToFind: import("mobx-state-tree").IType<string | undefined, string, string>;
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}, {
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readonly predicate: (_sheet: unknown, row: {
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cellsWithDerived: {
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text: string;
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}[];
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}) => boolean;
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} & {
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setString(s: string): void;
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clear(): void;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
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columnFilters: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
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}, {
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readonly filters: any[]; /**
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* #property
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*/
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setRowFullTextFilter(stringToFind: string): void;
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rowPassesFilters(sheet: unknown, row: unknown): boolean;
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} & {
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addBlankColumnFilter(columnNumber: number): void;
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removeColumnFilter(filter: import("mobx-state-tree").IAnyType): boolean;
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clearAllFilters(): void;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
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mode: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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importWizard: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
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fileType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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hasColumnNameLine: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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columnNameLineNumber: import("mobx-state-tree").IType<number | undefined, number, number>;
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selectedAssemblyName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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}, {
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fileTypes: string[];
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fileSource: any;
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error: unknown;
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loading: boolean;
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} & {
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readonly isReadyToOpen: any;
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readonly canCancel: any; /**
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* #property
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* switch specifying whether we are showing the import wizard or the
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* spreadsheet in our viewing area
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*/
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readonly fileName: any;
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readonly requiresUnzip: any;
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isValidRefName(refName: string, assemblyName?: string | undefined): boolean;
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} & {
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setSelectedAssemblyName(s: string): void;
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setFileSource(newSource: unknown): void;
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toggleHasColumnNameLine(): void;
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setColumnNameLineNumber(newnumber: number): void;
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setFileType(typeName: string): void;
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setError(error: unknown): void;
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setLoaded(): void;
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cancelButton(): void;
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import(assemblyName: string): Promise<void>;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
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spreadsheet: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IModelType<{
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rowSet: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
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isLoaded: import("mobx-state-tree").ISimpleType<true>;
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rows: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").ISimpleType<string>;
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cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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}, {
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toggleSelect(): void;
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unSelect(): void;
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select(): void;
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setExtendedData(data: unknown): void;
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} & {
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readonly cellsWithDerived: any;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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}, {
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readonly count: number;
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readonly passingFiltersCount: number;
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readonly selectedCount: number;
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readonly selectedAndPassingFiltersCount: number;
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readonly sortedRows: ({
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id: string;
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cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
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extendedData: any;
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isSelected: boolean;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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toggleSelect(): void;
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unSelect(): void;
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select(): void;
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setExtendedData(data: unknown): void;
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} & {
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readonly cellsWithDerived: any;
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} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").ISimpleType<string>;
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cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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}, {
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toggleSelect(): void;
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unSelect(): void;
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select(): void;
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setExtendedData(data: unknown): void;
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} & {
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readonly cellsWithDerived: any;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
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readonly selectedRows: ({
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id: string;
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cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
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extendedData: any;
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isSelected: boolean;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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toggleSelect(): void;
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unSelect(): void;
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select(): void;
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setExtendedData(data: unknown): void;
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} & {
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readonly cellsWithDerived: any;
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} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").ISimpleType<string>;
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cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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}, {
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toggleSelect(): void;
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unSelect(): void;
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select(): void;
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setExtendedData(data: unknown): void;
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} & {
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readonly cellsWithDerived: any;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
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readonly selectedFilteredRows: ({
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id: string;
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cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
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text: import("mobx-state-tree").ISimpleType<string>;
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extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
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}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
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extendedData: any;
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isSelected: boolean;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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toggleSelect(): void;
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unSelect(): void;
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select(): void;
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setExtendedData(data: unknown): void;
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} & {
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readonly cellsWithDerived: any;
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} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").ISimpleType<string>;
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+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
201
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
202
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
203
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
204
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
205
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
206
|
+
}, {
|
|
207
|
+
toggleSelect(): void;
|
|
208
|
+
unSelect(): void;
|
|
209
|
+
select(): void;
|
|
210
|
+
setExtendedData(data: unknown): void;
|
|
211
|
+
} & {
|
|
212
|
+
readonly cellsWithDerived: any;
|
|
213
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
|
|
214
|
+
readonly sortedFilteredRows: ({
|
|
215
|
+
id: string;
|
|
216
|
+
cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
|
|
217
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
218
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
219
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
220
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
221
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
222
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
|
|
223
|
+
extendedData: any;
|
|
224
|
+
isSelected: boolean;
|
|
225
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
226
|
+
toggleSelect(): void;
|
|
227
|
+
unSelect(): void;
|
|
228
|
+
select(): void;
|
|
229
|
+
setExtendedData(data: unknown): void;
|
|
230
|
+
} & {
|
|
231
|
+
readonly cellsWithDerived: any;
|
|
232
|
+
} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
|
|
233
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
234
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
235
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
236
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
237
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
238
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
239
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
240
|
+
}, {
|
|
241
|
+
toggleSelect(): void;
|
|
242
|
+
unSelect(): void;
|
|
243
|
+
select(): void;
|
|
244
|
+
setExtendedData(data: unknown): void;
|
|
245
|
+
} & {
|
|
246
|
+
readonly cellsWithDerived: any;
|
|
247
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
|
|
248
|
+
} & {
|
|
249
|
+
unselectAll(): void;
|
|
250
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
|
|
251
|
+
columns: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
252
|
+
name: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
253
|
+
dataType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IAnyType, [undefined]>;
|
|
254
|
+
isDerived: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
255
|
+
derivationFunctionText: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
256
|
+
}, {
|
|
257
|
+
readonly expr: any;
|
|
258
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
259
|
+
columnDisplayOrder: import("mobx-state-tree").IArrayType<import("mobx-state-tree").ISimpleType<number>>;
|
|
260
|
+
hasColumnNames: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
261
|
+
sortColumns: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
262
|
+
columnNumber: import("mobx-state-tree").ISimpleType<number>;
|
|
263
|
+
descending: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
264
|
+
}, {
|
|
265
|
+
switchDirection(): void;
|
|
266
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
267
|
+
assemblyName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
268
|
+
}, {
|
|
269
|
+
defaultDataType: import("mobx-state-tree").IModelType<{
|
|
270
|
+
type: import("mobx-state-tree").ISimpleType<string>;
|
|
271
|
+
}, {
|
|
272
|
+
DataCellReactComponent: import("react").FC<any> | null;
|
|
273
|
+
FilterModelType: any;
|
|
274
|
+
displayName: string;
|
|
275
|
+
categoryName: string | undefined;
|
|
276
|
+
} & {
|
|
277
|
+
compare: any;
|
|
278
|
+
readonly hasFilter: boolean;
|
|
279
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
|
|
280
|
+
rowMenuPosition: {
|
|
281
|
+
anchorEl: Element;
|
|
282
|
+
rowNumber: string;
|
|
283
|
+
} | null;
|
|
284
|
+
isLoaded: boolean;
|
|
285
|
+
} & {
|
|
286
|
+
readonly initialized: boolean | undefined;
|
|
287
|
+
readonly hideRowSelection: any;
|
|
288
|
+
readonly dataTypeChoices: {
|
|
289
|
+
typeName: "LocString" | "Text" | "LocRef" | "Number" | "LocStart" | "LocEnd";
|
|
290
|
+
displayName: string;
|
|
291
|
+
categoryName: string | undefined;
|
|
292
|
+
}[];
|
|
293
|
+
rowSortingComparisonFunction(rowA: {
|
|
294
|
+
id: string;
|
|
295
|
+
cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
|
|
296
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
297
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
298
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
299
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
300
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
301
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
|
|
302
|
+
extendedData: any;
|
|
303
|
+
isSelected: boolean;
|
|
304
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
305
|
+
toggleSelect(): void;
|
|
306
|
+
unSelect(): void;
|
|
307
|
+
select(): void;
|
|
308
|
+
setExtendedData(data: unknown): void;
|
|
309
|
+
} & {
|
|
310
|
+
readonly cellsWithDerived: any;
|
|
311
|
+
} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
|
|
312
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
313
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
314
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
315
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
316
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
317
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
318
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
319
|
+
}, {
|
|
320
|
+
toggleSelect(): void;
|
|
321
|
+
unSelect(): void;
|
|
322
|
+
select(): void;
|
|
323
|
+
setExtendedData(data: unknown): void;
|
|
324
|
+
} & {
|
|
325
|
+
readonly cellsWithDerived: any;
|
|
326
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>, rowB: {
|
|
327
|
+
id: string;
|
|
328
|
+
cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
|
|
329
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
330
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
331
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
332
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
333
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
334
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
|
|
335
|
+
extendedData: any;
|
|
336
|
+
isSelected: boolean;
|
|
337
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
338
|
+
toggleSelect(): void;
|
|
339
|
+
unSelect(): void;
|
|
340
|
+
select(): void;
|
|
341
|
+
setExtendedData(data: unknown): void;
|
|
342
|
+
} & {
|
|
343
|
+
readonly cellsWithDerived: any;
|
|
344
|
+
} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
|
|
345
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
346
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
347
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
348
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
349
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
350
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
351
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
352
|
+
}, {
|
|
353
|
+
toggleSelect(): void;
|
|
354
|
+
unSelect(): void;
|
|
355
|
+
select(): void;
|
|
356
|
+
setExtendedData(data: unknown): void;
|
|
357
|
+
} & {
|
|
358
|
+
readonly cellsWithDerived: any;
|
|
359
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>): any;
|
|
360
|
+
} & {
|
|
361
|
+
afterAttach(): void;
|
|
362
|
+
setLoaded(flag: boolean): void;
|
|
363
|
+
setRowMenuPosition(newPosition: {
|
|
364
|
+
anchorEl: Element;
|
|
365
|
+
rowNumber: string;
|
|
366
|
+
} | null): void;
|
|
367
|
+
setSortColumns(newSort: readonly import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
|
|
368
|
+
columnNumber: import("mobx-state-tree").ISimpleType<number>;
|
|
369
|
+
descending: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
370
|
+
}>>[]): void;
|
|
371
|
+
setColumnType(columnNumber: number, newTypeName: string): void;
|
|
372
|
+
unselectAll(): void;
|
|
373
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
374
|
+
}, {
|
|
375
|
+
width: number;
|
|
376
|
+
} & {
|
|
377
|
+
menuItems(): import("@jbrowse/core/ui").MenuItem[];
|
|
378
|
+
} & {
|
|
379
|
+
setDisplayName(name: string): void;
|
|
380
|
+
setWidth(newWidth: number): void;
|
|
381
|
+
setMinimized(flag: boolean): void;
|
|
382
|
+
} & {
|
|
383
|
+
width: number;
|
|
384
|
+
rowMenuItems: import("@jbrowse/plugin-spreadsheet-view/src/SpreadsheetView/models/SpreadsheetView").MenuItemWithDisabledCallback[]; /**
|
|
385
|
+
* #property
|
|
386
|
+
*/
|
|
387
|
+
} & {
|
|
388
|
+
readonly readyToDisplay: boolean;
|
|
389
|
+
readonly hideRowSelection: boolean;
|
|
390
|
+
readonly outputRows: ({
|
|
391
|
+
id: string;
|
|
392
|
+
cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
|
|
393
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
394
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
395
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
396
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
397
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
398
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
|
|
399
|
+
extendedData: any;
|
|
400
|
+
isSelected: boolean;
|
|
401
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
402
|
+
toggleSelect(): void;
|
|
403
|
+
unSelect(): void;
|
|
404
|
+
select(): void;
|
|
405
|
+
setExtendedData(data: unknown): void;
|
|
406
|
+
} & {
|
|
407
|
+
readonly cellsWithDerived: any;
|
|
408
|
+
} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
|
|
409
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
410
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
411
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
412
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
413
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
414
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
415
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
416
|
+
}, {
|
|
417
|
+
toggleSelect(): void;
|
|
418
|
+
unSelect(): void;
|
|
419
|
+
select(): void;
|
|
420
|
+
setExtendedData(data: unknown): void;
|
|
421
|
+
} & {
|
|
422
|
+
readonly cellsWithDerived: any;
|
|
423
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[] | undefined;
|
|
424
|
+
readonly assembly: ({
|
|
425
|
+
[x: string]: any;
|
|
426
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
427
|
+
setSubschema(slotName: string, data: unknown): any;
|
|
428
|
+
} & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>) | undefined;
|
|
429
|
+
} & {
|
|
430
|
+
setRowMenuItems(newItems: import("@jbrowse/core/ui").MenuItem[]): void;
|
|
431
|
+
setWidth(newWidth: number): number;
|
|
432
|
+
setHeight(newHeight: number): number;
|
|
433
|
+
resizeHeight(distance: number): number;
|
|
434
|
+
resizeWidth(distance: number): number;
|
|
435
|
+
displaySpreadsheet(spreadsheet: import("mobx-state-tree").ModelCreationType<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
|
|
436
|
+
rowSet: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
|
|
437
|
+
isLoaded: import("mobx-state-tree").ISimpleType<true>;
|
|
438
|
+
rows: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
439
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
440
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
441
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
442
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
443
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
444
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
445
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
446
|
+
}, {
|
|
447
|
+
toggleSelect(): void;
|
|
448
|
+
unSelect(): void;
|
|
449
|
+
select(): void;
|
|
450
|
+
setExtendedData(data: unknown): void;
|
|
451
|
+
} & {
|
|
452
|
+
readonly cellsWithDerived: any;
|
|
453
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
454
|
+
}, {
|
|
455
|
+
readonly count: number;
|
|
456
|
+
readonly passingFiltersCount: number;
|
|
457
|
+
readonly selectedCount: number;
|
|
458
|
+
readonly selectedAndPassingFiltersCount: number;
|
|
459
|
+
readonly sortedRows: ({
|
|
460
|
+
id: string;
|
|
461
|
+
cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
|
|
462
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
463
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
464
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
465
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
466
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
467
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
|
|
468
|
+
extendedData: any;
|
|
469
|
+
isSelected: boolean;
|
|
470
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
471
|
+
toggleSelect(): void;
|
|
472
|
+
unSelect(): void;
|
|
473
|
+
select(): void;
|
|
474
|
+
setExtendedData(data: unknown): void;
|
|
475
|
+
} & {
|
|
476
|
+
readonly cellsWithDerived: any;
|
|
477
|
+
} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
|
|
478
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
479
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
480
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
481
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
482
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
483
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
484
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
485
|
+
}, {
|
|
486
|
+
toggleSelect(): void;
|
|
487
|
+
unSelect(): void;
|
|
488
|
+
select(): void;
|
|
489
|
+
setExtendedData(data: unknown): void;
|
|
490
|
+
} & {
|
|
491
|
+
readonly cellsWithDerived: any;
|
|
492
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
|
|
493
|
+
readonly selectedRows: ({
|
|
494
|
+
id: string;
|
|
495
|
+
cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
|
|
496
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
497
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
498
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
499
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
500
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
501
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
|
|
502
|
+
extendedData: any;
|
|
503
|
+
isSelected: boolean;
|
|
504
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
505
|
+
toggleSelect(): void;
|
|
506
|
+
unSelect(): void;
|
|
507
|
+
select(): void;
|
|
508
|
+
setExtendedData(data: unknown): void;
|
|
509
|
+
} & {
|
|
510
|
+
readonly cellsWithDerived: any;
|
|
511
|
+
} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
|
|
512
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
513
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
514
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
515
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
516
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
517
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
518
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
519
|
+
}, {
|
|
520
|
+
toggleSelect(): void;
|
|
521
|
+
unSelect(): void;
|
|
522
|
+
select(): void;
|
|
523
|
+
setExtendedData(data: unknown): void;
|
|
524
|
+
} & {
|
|
525
|
+
readonly cellsWithDerived: any;
|
|
526
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
|
|
527
|
+
readonly selectedFilteredRows: ({
|
|
528
|
+
id: string;
|
|
529
|
+
cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
|
|
530
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
531
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
532
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
533
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
534
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
535
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
|
|
536
|
+
extendedData: any;
|
|
537
|
+
isSelected: boolean;
|
|
538
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
539
|
+
toggleSelect(): void;
|
|
540
|
+
unSelect(): void;
|
|
541
|
+
select(): void;
|
|
542
|
+
setExtendedData(data: unknown): void;
|
|
543
|
+
} & {
|
|
544
|
+
readonly cellsWithDerived: any;
|
|
545
|
+
} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
|
|
546
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
547
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
548
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
549
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
550
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
551
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
552
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
553
|
+
}, {
|
|
554
|
+
toggleSelect(): void;
|
|
555
|
+
unSelect(): void;
|
|
556
|
+
select(): void;
|
|
557
|
+
setExtendedData(data: unknown): void;
|
|
558
|
+
} & {
|
|
559
|
+
readonly cellsWithDerived: any;
|
|
560
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
|
|
561
|
+
readonly sortedFilteredRows: ({
|
|
562
|
+
id: string;
|
|
563
|
+
cells: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
|
|
564
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
565
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
566
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
567
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
568
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
569
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
|
|
570
|
+
extendedData: any;
|
|
571
|
+
isSelected: boolean;
|
|
572
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
573
|
+
toggleSelect(): void;
|
|
574
|
+
unSelect(): void;
|
|
575
|
+
select(): void;
|
|
576
|
+
setExtendedData(data: unknown): void;
|
|
577
|
+
} & {
|
|
578
|
+
readonly cellsWithDerived: any;
|
|
579
|
+
} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
|
|
580
|
+
id: import("mobx-state-tree").ISimpleType<string>;
|
|
581
|
+
cells: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
582
|
+
text: import("mobx-state-tree").ISimpleType<string>;
|
|
583
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
584
|
+
}, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
585
|
+
extendedData: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IType<any, any, any>>;
|
|
586
|
+
isSelected: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
587
|
+
}, {
|
|
588
|
+
toggleSelect(): void;
|
|
589
|
+
unSelect(): void;
|
|
590
|
+
select(): void;
|
|
591
|
+
setExtendedData(data: unknown): void;
|
|
592
|
+
} & {
|
|
593
|
+
readonly cellsWithDerived: any;
|
|
594
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
|
|
595
|
+
} & {
|
|
596
|
+
unselectAll(): void;
|
|
597
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
|
|
598
|
+
columns: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
599
|
+
name: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
600
|
+
dataType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IAnyType, [undefined]>;
|
|
601
|
+
isDerived: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
602
|
+
derivationFunctionText: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
603
|
+
}, {
|
|
604
|
+
readonly expr: any;
|
|
605
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
606
|
+
columnDisplayOrder: import("mobx-state-tree").IArrayType<import("mobx-state-tree").ISimpleType<number>>;
|
|
607
|
+
hasColumnNames: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
608
|
+
sortColumns: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
609
|
+
columnNumber: import("mobx-state-tree").ISimpleType<number>;
|
|
610
|
+
descending: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
611
|
+
}, {
|
|
612
|
+
switchDirection(): void;
|
|
613
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
614
|
+
assemblyName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
615
|
+
}>>): void;
|
|
616
|
+
setImportMode(): void;
|
|
617
|
+
setDisplayMode(): void;
|
|
618
|
+
closeView(): void;
|
|
619
|
+
} & {
|
|
620
|
+
menuItems(): {
|
|
621
|
+
label: string;
|
|
622
|
+
onClick: () => void;
|
|
623
|
+
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
624
|
+
muiName: string;
|
|
625
|
+
};
|
|
626
|
+
}[];
|
|
627
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
|
|
628
|
+
circularView: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
|
|
629
|
+
id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
630
|
+
displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
|
|
631
|
+
minimized: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
632
|
+
} & {
|
|
633
|
+
type: import("mobx-state-tree").ISimpleType<"CircularView">;
|
|
634
|
+
offsetRadians: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
635
|
+
bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
636
|
+
tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
|
|
637
|
+
hideVerticalResizeHandle: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
638
|
+
hideTrackSelectorButton: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
639
|
+
lockedFitToWindow: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
640
|
+
disableImportForm: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
641
|
+
height: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
|
|
642
|
+
displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
|
|
643
|
+
refName: import("mobx-state-tree").ISimpleType<string>;
|
|
644
|
+
start: import("mobx-state-tree").ISimpleType<number>;
|
|
645
|
+
end: import("mobx-state-tree").ISimpleType<number>;
|
|
646
|
+
reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
|
|
647
|
+
} & {
|
|
648
|
+
assemblyName: import("mobx-state-tree").ISimpleType<string>;
|
|
649
|
+
}, {
|
|
650
|
+
setRefName(newRefName: string): void; /**
|
|
651
|
+
* #property
|
|
652
|
+
*/
|
|
653
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
|
|
654
|
+
scrollX: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
655
|
+
scrollY: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
656
|
+
minimumRadiusPx: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
657
|
+
spacingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
658
|
+
paddingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
659
|
+
lockedPaddingPx: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
660
|
+
minVisibleWidth: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
661
|
+
minimumBlockWidth: import("mobx-state-tree").IType<number | undefined, number, number>;
|
|
662
|
+
trackSelectorType: import("mobx-state-tree").IType<string | undefined, string, string>;
|
|
663
|
+
}, {
|
|
664
|
+
width: number;
|
|
665
|
+
} & {
|
|
666
|
+
menuItems(): import("@jbrowse/core/ui").MenuItem[];
|
|
667
|
+
} & {
|
|
668
|
+
setDisplayName(name: string): void;
|
|
669
|
+
setWidth(newWidth: number): void;
|
|
670
|
+
setMinimized(flag: boolean): void;
|
|
671
|
+
} & {
|
|
672
|
+
volatileWidth: number | undefined; /**
|
|
673
|
+
* #getter
|
|
674
|
+
*/
|
|
675
|
+
error: unknown;
|
|
676
|
+
} & {
|
|
677
|
+
readonly width: number;
|
|
678
|
+
readonly visibleSection: {
|
|
679
|
+
rho: [number, number];
|
|
680
|
+
theta: [number, number];
|
|
681
|
+
};
|
|
682
|
+
readonly circumferencePx: number;
|
|
683
|
+
readonly radiusPx: number;
|
|
684
|
+
readonly bpPerRadian: number;
|
|
685
|
+
readonly pxPerRadian: number;
|
|
686
|
+
readonly centerXY: [number, number];
|
|
687
|
+
readonly totalBp: number;
|
|
688
|
+
readonly maximumRadiusPx: number;
|
|
689
|
+
readonly maxBpPerPx: number;
|
|
690
|
+
readonly minBpPerPx: number;
|
|
691
|
+
readonly atMaxBpPerPx: boolean;
|
|
692
|
+
readonly atMinBpPerPx: boolean;
|
|
693
|
+
readonly tooSmallToLock: boolean;
|
|
694
|
+
readonly figureDimensions: [number, number];
|
|
695
|
+
readonly figureWidth: number;
|
|
696
|
+
readonly figureHeight: number;
|
|
697
|
+
readonly elidedRegions: import("@jbrowse/plugin-circular-view/src/CircularView/models/slices").SliceRegion[];
|
|
698
|
+
readonly assemblyNames: string[];
|
|
699
|
+
readonly initialized: boolean;
|
|
700
|
+
} & {
|
|
701
|
+
readonly staticSlices: import("@jbrowse/plugin-circular-view/src/CircularView/models/slices").Slice[];
|
|
702
|
+
} & {
|
|
703
|
+
readonly visibleStaticSlices: import("@jbrowse/plugin-circular-view/src/CircularView/models/slices").Slice[];
|
|
704
|
+
} & {
|
|
705
|
+
setWidth(newWidth: number): number;
|
|
706
|
+
setHeight(newHeight: number): number;
|
|
707
|
+
resizeHeight(distance: number): number;
|
|
708
|
+
resizeWidth(distance: number): number;
|
|
709
|
+
rotateClockwiseButton(): void;
|
|
710
|
+
rotateCounterClockwiseButton(): void;
|
|
711
|
+
rotateClockwise(distance?: number): void;
|
|
712
|
+
rotateCounterClockwise(distance?: number): void;
|
|
713
|
+
zoomInButton(): void;
|
|
714
|
+
zoomOutButton(): void;
|
|
715
|
+
setBpPerPx(newVal: number): void;
|
|
716
|
+
setModelViewWhenAdjust(secondCondition: boolean): void;
|
|
717
|
+
closeView(): void;
|
|
718
|
+
setDisplayedRegions(regions: import("mobx-state-tree").SnapshotOrInstance<import("mobx-state-tree").IModelType<{
|
|
719
|
+
refName: import("mobx-state-tree").ISimpleType<string>;
|
|
720
|
+
start: import("mobx-state-tree").ISimpleType<number>;
|
|
721
|
+
end: import("mobx-state-tree").ISimpleType<number>;
|
|
722
|
+
reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
|
|
723
|
+
} & {
|
|
724
|
+
assemblyName: import("mobx-state-tree").ISimpleType<string>;
|
|
725
|
+
}, {
|
|
726
|
+
setRefName(newRefName: string): void; /**
|
|
727
|
+
* #property
|
|
728
|
+
*/
|
|
729
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>[]): void;
|
|
730
|
+
activateTrackSelector(): import("@jbrowse/core/util").Widget;
|
|
731
|
+
toggleTrack(trackId: string): void;
|
|
732
|
+
setError(error: unknown): void;
|
|
733
|
+
showTrack(trackId: string, initialSnapshot?: {}): void;
|
|
734
|
+
addTrackConf(configuration: {
|
|
735
|
+
[x: string]: any;
|
|
736
|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
|
|
737
|
+
setSubschema(slotName: string, data: unknown): any;
|
|
738
|
+
} & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>, initialSnapshot?: {}): void;
|
|
739
|
+
hideTrack(trackId: string): number;
|
|
740
|
+
toggleFitToWindowLock(): boolean;
|
|
741
|
+
exportSvg(opts?: import("@jbrowse/plugin-circular-view/src/CircularView/models/CircularView").ExportSvgOptions): Promise<void>;
|
|
742
|
+
} & {
|
|
743
|
+
menuItems(): import("@jbrowse/core/ui").MenuItem[];
|
|
744
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
|
|
745
|
+
}, {
|
|
746
|
+
width: number;
|
|
747
|
+
} & {
|
|
748
|
+
menuItems(): import("@jbrowse/core/ui").MenuItem[];
|
|
749
|
+
} & {
|
|
750
|
+
setDisplayName(name: string): void;
|
|
751
|
+
setWidth(newWidth: number): void;
|
|
752
|
+
setMinimized(flag: boolean): void;
|
|
753
|
+
} & {
|
|
754
|
+
width: number;
|
|
755
|
+
} & {
|
|
756
|
+
/**
|
|
757
|
+
* #getter
|
|
758
|
+
*/
|
|
759
|
+
readonly selectedRows: any;
|
|
760
|
+
/**
|
|
761
|
+
* #getter
|
|
762
|
+
*/
|
|
763
|
+
readonly assemblyName: any;
|
|
764
|
+
/**
|
|
765
|
+
* #getter
|
|
766
|
+
*/
|
|
767
|
+
readonly showCircularView: boolean;
|
|
768
|
+
/**
|
|
769
|
+
* #getter
|
|
770
|
+
*/
|
|
771
|
+
readonly features: any[];
|
|
772
|
+
/**
|
|
773
|
+
* #getter
|
|
774
|
+
*/
|
|
775
|
+
readonly featuresAdapterConfigSnapshot: {
|
|
776
|
+
type: string;
|
|
777
|
+
features: any[];
|
|
778
|
+
};
|
|
779
|
+
/**
|
|
780
|
+
* #getter
|
|
781
|
+
*/
|
|
782
|
+
readonly featureRefNames: any[];
|
|
783
|
+
/**
|
|
784
|
+
* #getter
|
|
785
|
+
*/
|
|
786
|
+
readonly featuresCircularTrackConfiguration: {
|
|
787
|
+
type: string;
|
|
788
|
+
trackId: string;
|
|
789
|
+
name: string;
|
|
790
|
+
adapter: {
|
|
791
|
+
type: string;
|
|
792
|
+
features: any[];
|
|
793
|
+
};
|
|
794
|
+
assemblyNames: any[];
|
|
795
|
+
displays: {
|
|
796
|
+
type: string;
|
|
797
|
+
displayId: string;
|
|
798
|
+
onChordClick: string;
|
|
799
|
+
renderer: {
|
|
800
|
+
type: string;
|
|
801
|
+
};
|
|
802
|
+
}[];
|
|
803
|
+
};
|
|
804
|
+
} & {
|
|
805
|
+
SpreadsheetViewReactComponent: (import("react").ComponentClass<{
|
|
806
|
+
model: any;
|
|
807
|
+
session?: import("mobx-state-tree").IAnyStateTreeNode | undefined;
|
|
808
|
+
}, any> | import("react").FunctionComponent<{
|
|
809
|
+
model: any;
|
|
810
|
+
session?: import("mobx-state-tree").IAnyStateTreeNode | undefined;
|
|
811
|
+
}>) | import("react").LazyExoticComponent<import("react").ComponentClass<{
|
|
812
|
+
model: any;
|
|
813
|
+
session?: import("mobx-state-tree").IAnyStateTreeNode | undefined;
|
|
814
|
+
}, any> | import("react").FunctionComponent<{
|
|
815
|
+
model: any;
|
|
816
|
+
session?: import("mobx-state-tree").IAnyStateTreeNode | undefined;
|
|
817
|
+
}>>;
|
|
818
|
+
CircularViewReactComponent: (import("react").ComponentClass<{
|
|
819
|
+
model: any;
|
|
820
|
+
session?: import("mobx-state-tree").IAnyStateTreeNode | undefined;
|
|
821
|
+
}, any> | import("react").FunctionComponent<{
|
|
822
|
+
model: any;
|
|
823
|
+
session?: import("mobx-state-tree").IAnyStateTreeNode | undefined;
|
|
824
|
+
}>) | import("react").LazyExoticComponent<import("react").ComponentClass<{
|
|
825
|
+
model: any;
|
|
826
|
+
session?: import("mobx-state-tree").IAnyStateTreeNode | undefined;
|
|
827
|
+
}, any> | import("react").FunctionComponent<{
|
|
828
|
+
model: any;
|
|
829
|
+
session?: import("mobx-state-tree").IAnyStateTreeNode | undefined;
|
|
830
|
+
}>>;
|
|
831
|
+
circularViewOptionsBarHeight: number;
|
|
832
|
+
} & {
|
|
833
|
+
/**
|
|
834
|
+
* #action
|
|
835
|
+
*/
|
|
836
|
+
setWidth(newWidth: number): void;
|
|
837
|
+
/**
|
|
838
|
+
* #action
|
|
839
|
+
*/
|
|
840
|
+
setHeight(newHeight: number): number;
|
|
841
|
+
/**
|
|
842
|
+
* #action
|
|
843
|
+
*/
|
|
844
|
+
setImportMode(): void;
|
|
845
|
+
/**
|
|
846
|
+
* #action
|
|
847
|
+
*/
|
|
848
|
+
setDisplayMode(): void;
|
|
849
|
+
/**
|
|
850
|
+
* #action
|
|
851
|
+
*/
|
|
852
|
+
closeView(): void;
|
|
853
|
+
/**
|
|
854
|
+
* #action
|
|
855
|
+
*/
|
|
856
|
+
setDisplayedRegions(regions: Region[]): void;
|
|
857
|
+
/**
|
|
858
|
+
* #action
|
|
859
|
+
*/
|
|
860
|
+
setOnlyDisplayRelevantRegionsInCircularView(val: boolean): void;
|
|
861
|
+
} & {
|
|
862
|
+
/**
|
|
863
|
+
* #method
|
|
864
|
+
*/
|
|
865
|
+
menuItems(): {
|
|
866
|
+
label: string;
|
|
867
|
+
onClick: () => void;
|
|
868
|
+
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
869
|
+
muiName: string;
|
|
870
|
+
};
|
|
871
|
+
}[];
|
|
872
|
+
} & {
|
|
873
|
+
/**
|
|
874
|
+
* #action
|
|
875
|
+
*/
|
|
876
|
+
resizeHeight(distance: number): number;
|
|
877
|
+
afterAttach(): void;
|
|
878
|
+
}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
|
|
879
|
+
export type SvInspectorViewStateModel = ReturnType<typeof SvInspectorViewF>;
|
|
880
|
+
export type SvInspectorViewModel = Instance<SvInspectorViewStateModel>;
|
|
881
|
+
export default SvInspectorViewF;
|