@jbrowse/plugin-sequence 3.5.0 → 3.5.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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@@ -79,7 +79,14 @@ class IndexedFastaAdapter extends BaseAdapter_1.BaseSequenceAdapter {
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79
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end: chunkStart + chunkSize,
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};
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(0, stopToken_1.checkStopToken)(stopToken);
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82
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-
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82
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+
const res = await this.seqCache.get(JSON.stringify(r), {
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83
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...r,
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84
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+
fasta,
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85
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});
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86
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if (!res) {
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break;
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88
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+
}
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+
chunks.push(res);
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}
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const seq = chunks
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.filter(f => !!f)
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@@ -184,6 +184,7 @@ export declare function modelFactory(configSchema: AnyConfigurationSchemaType):
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readonly renderDelay: number;
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readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
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readonly selectedFeatureId: string | undefined;
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+
copyInfoToClipboard(feature: import("@jbrowse/core/util").Feature): void;
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} & {
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readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
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readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
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@@ -74,7 +74,14 @@ export default class IndexedFastaAdapter extends BaseSequenceAdapter {
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end: chunkStart + chunkSize,
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};
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checkStopToken(stopToken);
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-
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77
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+
const res = await this.seqCache.get(JSON.stringify(r), {
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78
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...r,
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79
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fasta,
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80
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});
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81
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if (!res) {
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82
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break;
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83
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}
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84
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chunks.push(res);
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85
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}
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const seq = chunks
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.filter(f => !!f)
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@@ -184,6 +184,7 @@ export declare function modelFactory(configSchema: AnyConfigurationSchemaType):
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readonly renderDelay: number;
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readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
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readonly selectedFeatureId: string | undefined;
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187
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+
copyInfoToClipboard(feature: import("@jbrowse/core/util").Feature): void;
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187
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} & {
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readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
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readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
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package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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1
1
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{
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2
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"name": "@jbrowse/plugin-sequence",
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3
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-
"version": "3.5.
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3
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+
"version": "3.5.1",
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"description": "JBrowse 2 sequence adapters, tracks, etc.",
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5
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"keywords": [
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"jbrowse",
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@@ -39,9 +39,9 @@
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"@gmod/abortable-promise-cache": "^3.0.1",
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"@gmod/indexedfasta": "^4.0.0",
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"@gmod/twobit": "^6.0.0",
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42
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-
"@jbrowse/core": "^3.5.
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43
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-
"@jbrowse/plugin-linear-genome-view": "^3.5.
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44
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-
"@jbrowse/plugin-wiggle": "^3.5.
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"@jbrowse/core": "^3.5.1",
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"@jbrowse/plugin-linear-genome-view": "^3.5.1",
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"@jbrowse/plugin-wiggle": "^3.5.1",
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"@mui/material": "^7.0.0",
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"mobx": "^6.0.0",
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"mobx-react": "^9.0.0",
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@@ -57,5 +57,5 @@
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"distModule": "esm/index.js",
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"srcModule": "src/index.ts",
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"module": "esm/index.js",
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-
"gitHead": "
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"gitHead": "cb8859da9d838ad2594964777c5c54f385d98f5e"
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}
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