@jbrowse/plugin-lollipop 3.7.0 → 4.0.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/esm/LinearLollipopDisplay/configSchema.d.ts +4 -4
- package/esm/LinearLollipopDisplay/index.js +2 -2
- package/esm/LinearLollipopDisplay/model.d.ts +953 -91
- package/esm/LinearLollipopDisplay/model.js +1 -2
- package/esm/LollipopRenderer/Layout.d.ts +8 -32
- package/esm/LollipopRenderer/Layout.js +4 -43
- package/esm/LollipopRenderer/LollipopRenderer.d.ts +2 -7
- package/esm/LollipopRenderer/LollipopRenderer.js +2 -10
- package/esm/LollipopRenderer/components/Lollipop.d.ts +17 -1
- package/esm/LollipopRenderer/components/Lollipop.js +27 -75
- package/esm/LollipopRenderer/components/LollipopRendering.js +29 -33
- package/esm/LollipopRenderer/components/Stick.d.ts +2 -7
- package/esm/LollipopRenderer/configSchema.d.ts +2 -2
- package/esm/LollipopRenderer/index.js +4 -4
- package/esm/index.js +3 -6
- package/package.json +23 -29
- package/dist/LinearLollipopDisplay/configSchema.d.ts +0 -31
- package/dist/LinearLollipopDisplay/configSchema.js +0 -13
- package/dist/LinearLollipopDisplay/index.d.ts +0 -2
- package/dist/LinearLollipopDisplay/index.js +0 -20
- package/dist/LinearLollipopDisplay/model.d.ts +0 -314
- package/dist/LinearLollipopDisplay/model.js +0 -34
- package/dist/LollipopRenderer/FloatingLayoutSession.d.ts +0 -6
- package/dist/LollipopRenderer/FloatingLayoutSession.js +0 -17
- package/dist/LollipopRenderer/Layout.d.ts +0 -54
- package/dist/LollipopRenderer/Layout.js +0 -113
- package/dist/LollipopRenderer/LollipopRenderer.d.ts +0 -8
- package/dist/LollipopRenderer/LollipopRenderer.js +0 -17
- package/dist/LollipopRenderer/components/Lollipop.d.ts +0 -2
- package/dist/LollipopRenderer/components/Lollipop.js +0 -87
- package/dist/LollipopRenderer/components/LollipopRendering.d.ts +0 -2
- package/dist/LollipopRenderer/components/LollipopRendering.js +0 -81
- package/dist/LollipopRenderer/components/ScoreText.d.ts +0 -14
- package/dist/LollipopRenderer/components/ScoreText.js +0 -20
- package/dist/LollipopRenderer/components/Stick.d.ts +0 -14
- package/dist/LollipopRenderer/components/Stick.js +0 -9
- package/dist/LollipopRenderer/configSchema.d.ts +0 -56
- package/dist/LollipopRenderer/configSchema.js +0 -58
- package/dist/LollipopRenderer/index.d.ts +0 -2
- package/dist/LollipopRenderer/index.js +0 -17
- package/dist/index.d.ts +0 -6
- package/dist/index.js +0 -19
- package/esm/LollipopRenderer/FloatingLayoutSession.d.ts +0 -6
- package/esm/LollipopRenderer/FloatingLayoutSession.js +0 -13
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import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
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export declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("mobx-state-tree").ISimpleType<string>;
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rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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} & {
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heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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} & {
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userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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} & {
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blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
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key: import("mobx-state-tree").ISimpleType<string>;
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region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
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reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
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isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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}, {
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stopToken: string | undefined;
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filled: boolean;
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reactElement: React.ReactElement | undefined;
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features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
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layout: any;
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status: string;
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error: unknown;
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message: string | undefined;
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maxHeightReached: boolean;
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ReactComponent: ({ model, }: {
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model: {
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error?: unknown;
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reload: () => void;
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message: React.ReactNode;
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filled?: boolean;
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status?: string;
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reactElement?: React.ReactElement;
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};
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}) => import("react/jsx-runtime").JSX.Element | undefined;
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renderProps: any;
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} & {
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doReload(): void;
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afterAttach(): void;
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setStatus(message: string): void;
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setLoading(newStopToken: string): void;
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setMessage(messageText: string): void;
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setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
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setError(error: unknown): void;
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reload(): void;
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beforeDestroy(): void;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
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maxFeatureScreenDensity: {
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type: string;
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description: string;
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defaultValue: number;
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};
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fetchSizeLimit: {
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type: string;
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defaultValue: number;
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description: string;
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};
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height: {
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type: string;
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defaultValue: number;
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description: string;
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};
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mouseover: {
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type: string;
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description: string;
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defaultValue: string;
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contextVariable: string[];
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};
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jexlFilters: {
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type: string;
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description: string;
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defaultValue: never[];
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};
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}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
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} & {
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type: import("mobx-state-tree").ISimpleType<"LinearLollipopDisplay">;
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configuration: AnyConfigurationSchemaType;
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}, {
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rendererTypeName: string;
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error: unknown;
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message: string | undefined;
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} & {
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readonly RenderingComponent: React.FC<{
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model: {
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type: string;
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rpcDriverName: string | undefined;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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rendererTypeName: string;
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error: unknown;
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message: string | undefined;
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} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("mobx-state-tree").ISimpleType<string>;
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rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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}, {
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rendererTypeName: string;
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message: string | undefined;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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onHorizontalScroll?: () => void;
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blockState?: Record<string, any>;
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}>;
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readonly DisplayBlurb: React.FC<{
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model: {
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type: string;
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rpcDriverName: string | undefined;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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rendererTypeName: string;
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message: string | undefined;
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} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("mobx-state-tree").ISimpleType<string>;
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rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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}, {
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rendererTypeName: string;
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message: string | undefined;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: any;
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renderProps(): any;
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readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
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readonly DisplayMessageComponent: undefined | React.FC<any>;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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regionCannotBeRendered(): null;
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} & {
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setMessage(arg?: string): void;
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setError(error?: unknown): void;
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setRpcDriverName(rpcDriverName: string): void;
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reload(): void;
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} & {
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scrollTop: number;
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} & {
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readonly height: number;
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} & {
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setScrollTop(scrollTop: number): void;
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setHeight(displayHeight: number): number;
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resizeHeight(distance: number): number;
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} & {
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featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
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currStatsBpPerPx: number;
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} & {
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readonly currentBytesRequested: number;
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readonly currentFeatureScreenDensity: number;
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readonly maxFeatureScreenDensity: any;
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readonly featureDensityStatsReady: boolean;
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readonly maxAllowableBytes: number;
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} & {
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afterAttach(): void;
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} & {
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setCurrStatsBpPerPx(n: number): void;
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
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getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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setFeatureDensityStatsP(arg: any): void;
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setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
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clearFeatureDensityStats(): void;
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} & {
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readonly regionTooLarge: boolean;
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readonly regionTooLargeReason: string;
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} & {
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readonly statsReadyAndRegionNotTooLarge: boolean;
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regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
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regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
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} & {
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mouseoverExtraInformation: string | undefined;
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featureIdUnderMouse: undefined | string;
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contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
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} & {
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readonly DisplayMessageComponent: undefined | React.FC<any>;
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readonly blockType: "staticBlocks" | "dynamicBlocks";
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readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
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} & {
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readonly renderDelay: number;
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readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
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readonly selectedFeatureId: string | undefined;
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copyInfoToClipboard(feature: import("@jbrowse/core/util").Feature): void;
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} & {
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readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
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readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
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readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, [number, number, number, number] | [number, number, number, number, {
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label?: string;
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description?: string;
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refName: string;
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}]>;
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getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
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getFeatureByID(blockKey: string, id: string): ([number, number, number, number] | [number, number, number, number, {
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label?: string;
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refName: string;
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}]) | undefined;
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searchFeatureByID(id: string): ([number, number, number, number] | [number, number, number, number, {
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}]) | undefined;
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} & {
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addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
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deleteBlock(key: string): void;
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selectFeature(feature: import("@jbrowse/core/util").Feature): void;
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navToFeature(feature: import("@jbrowse/core/util").Feature): void;
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clearFeatureSelection(): void;
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setFeatureIdUnderMouse(feature?: string): void;
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setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
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setMouseoverExtraInformation(extra?: string): void;
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} & {
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reload(): Promise<void>;
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} & {
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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renderProps(): any;
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} & {
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renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
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afterAttach(): void;
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} & {
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readonly renderDelay: number;
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renderProps(): any;
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readonly rendererTypeName: any;
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}, {
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type: string;
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} & Partial<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
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id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
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type: import("mobx-state-tree").ISimpleType<string>;
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rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
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} & {
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heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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} & {
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userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
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} & {
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blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
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key: import("mobx-state-tree").ISimpleType<string>;
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region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
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import { LayoutSession } from '@jbrowse/core/pluggableElementTypes/renderers/LayoutSession';
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import { MultiLayout } from '@jbrowse/core/util/layouts';
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export declare class FloatingLayoutSession extends LayoutSession {
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makeLayout(): MultiLayout<import("@jbrowse/core/util/layouts").BaseLayout<unknown>, unknown>;
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class FloatingLayoutSession extends LayoutSession_1.LayoutSession {
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}
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}
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exports.FloatingLayoutSession = FloatingLayoutSession;
|
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@@ -1,54 +0,0 @@
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import type { AnyConfigurationModel } from '@jbrowse/core/configuration';
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interface LayoutItem {
|
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uniqueId: string;
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anchorLocation: number;
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|
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width: number;
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|
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height: number;
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|
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data: {
|
|
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|
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score: number;
|
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|
-
};
|
|
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|
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}
|
|
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|
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type LayoutEntry = LayoutItem & {
|
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|
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y: number;
|
|
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|
-
};
|
|
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|
-
type LayoutMap = Map<string, LayoutEntry>;
|
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|
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export declare class FloatingLayout {
|
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|
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width: number;
|
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totalHeight: number;
|
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|
-
rectangles: Map<any, any>;
|
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|
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constructor({ width }: {
|
|
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|
-
width: number;
|
|
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|
-
});
|
|
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|
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discardRange(): void;
|
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|
-
items: LayoutItem[];
|
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|
-
layout: LayoutMap;
|
|
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|
-
add(uniqueId: string, anchorLocation: number, width: number, height: number, data: {
|
|
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|
-
score: number;
|
|
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|
-
}): void;
|
|
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|
-
getLayout(configuration?: AnyConfigurationModel): LayoutMap;
|
|
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|
-
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|
|
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|
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serializeRegion(): {
|
|
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|
-
pairs: [string, LayoutEntry][];
|
|
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|
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|
|
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|
-
};
|
|
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|
-
toJSON(): {
|
|
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|
-
pairs: [string, LayoutEntry][];
|
|
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|
-
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|
|
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|
-
};
|
|
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|
-
static fromJSON(): void;
|
|
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|
-
}
|
|
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|
-
export declare class PrecomputedFloatingLayout {
|
|
42
|
-
layout: LayoutMap;
|
|
43
|
-
totalHeight: number;
|
|
44
|
-
constructor({ pairs, totalHeight, }: {
|
|
45
|
-
pairs: [string, LayoutEntry][];
|
|
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|
-
totalHeight: number;
|
|
47
|
-
});
|
|
48
|
-
add(uniqueId: string): void;
|
|
49
|
-
getLayout(): LayoutMap;
|
|
50
|
-
getTotalHeight(): number;
|
|
51
|
-
discardRange(): void;
|
|
52
|
-
static fromJSON(json: ConstructorParameters<typeof PrecomputedFloatingLayout>[0]): PrecomputedFloatingLayout;
|
|
53
|
-
}
|
|
54
|
-
export {};
|
|
@@ -1,113 +0,0 @@
|
|
|
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|
-
"use strict";
|
|
2
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
|
-
exports.PrecomputedFloatingLayout = exports.FloatingLayout = void 0;
|
|
4
|
-
const configuration_1 = require("@jbrowse/core/configuration");
|
|
5
|
-
const range_1 = require("@jbrowse/core/util/range");
|
|
6
|
-
class FloatingLayout {
|
|
7
|
-
constructor({ width }) {
|
|
8
|
-
this.totalHeight = 0;
|
|
9
|
-
this.rectangles = new Map();
|
|
10
|
-
this.items = [];
|
|
11
|
-
this.layout = new Map();
|
|
12
|
-
if (!width) {
|
|
13
|
-
throw new Error('width required to make a new FloatingLayout');
|
|
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|
-
}
|
|
15
|
-
this.width = width;
|
|
16
|
-
}
|
|
17
|
-
discardRange() {
|
|
18
|
-
this.items = [];
|
|
19
|
-
this.layout = new Map();
|
|
20
|
-
this.totalHeight = 0;
|
|
21
|
-
}
|
|
22
|
-
add(uniqueId, anchorLocation, width, height, data) {
|
|
23
|
-
this.items.push({
|
|
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|
-
uniqueId,
|
|
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|
-
anchorLocation,
|
|
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|
-
width,
|
|
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|
-
height,
|
|
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|
-
data,
|
|
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|
-
});
|
|
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|
-
}
|
|
31
|
-
getLayout(configuration) {
|
|
32
|
-
if (!configuration) {
|
|
33
|
-
return this.layout;
|
|
34
|
-
}
|
|
35
|
-
const minY = (0, configuration_1.readConfObject)(configuration, 'minStickLength');
|
|
36
|
-
const sorted = this.items.sort((a, b) => a.data.score - b.data.score);
|
|
37
|
-
let maxBottom = 0;
|
|
38
|
-
const layoutEntries = new Array(sorted.length);
|
|
39
|
-
for (const [i, element] of sorted.entries()) {
|
|
40
|
-
const currentItem = element;
|
|
41
|
-
const { anchorLocation, width, height } = currentItem;
|
|
42
|
-
const start = anchorLocation - width / 2;
|
|
43
|
-
const end = start + width;
|
|
44
|
-
let top = minY;
|
|
45
|
-
let bottom = top + height;
|
|
46
|
-
for (let j = 0; j < i; j += 1) {
|
|
47
|
-
const [, previouslyLaidOutItem] = layoutEntries[j];
|
|
48
|
-
const { x: prevStart, y: prevTop, width: prevWidth, height: prevHeight, } = previouslyLaidOutItem;
|
|
49
|
-
const prevEnd = prevStart + prevWidth;
|
|
50
|
-
const prevBottom = prevTop + prevHeight;
|
|
51
|
-
if ((0, range_1.doesIntersect2)(prevStart, prevEnd, start, end) &&
|
|
52
|
-
(0, range_1.doesIntersect2)(prevTop, prevBottom, top, bottom)) {
|
|
53
|
-
top = prevBottom;
|
|
54
|
-
bottom = top + height;
|
|
55
|
-
j = -1;
|
|
56
|
-
}
|
|
57
|
-
}
|
|
58
|
-
layoutEntries[i] = [
|
|
59
|
-
currentItem.uniqueId,
|
|
60
|
-
{
|
|
61
|
-
...currentItem,
|
|
62
|
-
x: start,
|
|
63
|
-
y: top,
|
|
64
|
-
},
|
|
65
|
-
];
|
|
66
|
-
if (bottom > maxBottom) {
|
|
67
|
-
maxBottom = bottom;
|
|
68
|
-
}
|
|
69
|
-
}
|
|
70
|
-
this.totalHeight = maxBottom;
|
|
71
|
-
this.layout = new Map(layoutEntries);
|
|
72
|
-
return this.layout;
|
|
73
|
-
}
|
|
74
|
-
getTotalHeight() {
|
|
75
|
-
return this.totalHeight;
|
|
76
|
-
}
|
|
77
|
-
serializeRegion() {
|
|
78
|
-
return this.toJSON();
|
|
79
|
-
}
|
|
80
|
-
toJSON() {
|
|
81
|
-
return {
|
|
82
|
-
pairs: [...this.getLayout()],
|
|
83
|
-
totalHeight: this.getTotalHeight(),
|
|
84
|
-
};
|
|
85
|
-
}
|
|
86
|
-
static fromJSON() {
|
|
87
|
-
throw new Error('not supported');
|
|
88
|
-
}
|
|
89
|
-
}
|
|
90
|
-
exports.FloatingLayout = FloatingLayout;
|
|
91
|
-
class PrecomputedFloatingLayout {
|
|
92
|
-
constructor({ pairs, totalHeight, }) {
|
|
93
|
-
this.layout = new Map(pairs);
|
|
94
|
-
this.totalHeight = totalHeight;
|
|
95
|
-
}
|
|
96
|
-
add(uniqueId) {
|
|
97
|
-
if (!this.layout.has(uniqueId)) {
|
|
98
|
-
throw new Error(`layout error, precomputed layout is missing ${uniqueId}`);
|
|
99
|
-
}
|
|
100
|
-
}
|
|
101
|
-
getLayout() {
|
|
102
|
-
return this.layout;
|
|
103
|
-
}
|
|
104
|
-
getTotalHeight() {
|
|
105
|
-
return this.totalHeight;
|
|
106
|
-
}
|
|
107
|
-
discardRange() {
|
|
108
|
-
}
|
|
109
|
-
static fromJSON(json) {
|
|
110
|
-
return new PrecomputedFloatingLayout(json);
|
|
111
|
-
}
|
|
112
|
-
}
|
|
113
|
-
exports.PrecomputedFloatingLayout = PrecomputedFloatingLayout;
|
|
@@ -1,8 +0,0 @@
|
|
|
1
|
-
import BoxRendererType from '@jbrowse/core/pluggableElementTypes/renderers/BoxRendererType';
|
|
2
|
-
import { FloatingLayoutSession } from './FloatingLayoutSession';
|
|
3
|
-
import { PrecomputedFloatingLayout } from './Layout';
|
|
4
|
-
import type { LayoutSessionProps } from '@jbrowse/core/pluggableElementTypes/renderers/LayoutSession';
|
|
5
|
-
export default class LollipopRenderer extends BoxRendererType {
|
|
6
|
-
createLayoutSession(props: LayoutSessionProps): FloatingLayoutSession;
|
|
7
|
-
deserializeLayoutInClient(json: any): PrecomputedFloatingLayout;
|
|
8
|
-
}
|
|
@@ -1,17 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
|
-
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
|
-
};
|
|
5
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const BoxRendererType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/renderers/BoxRendererType"));
|
|
7
|
-
const FloatingLayoutSession_1 = require("./FloatingLayoutSession");
|
|
8
|
-
const Layout_1 = require("./Layout");
|
|
9
|
-
class LollipopRenderer extends BoxRendererType_1.default {
|
|
10
|
-
createLayoutSession(props) {
|
|
11
|
-
return new FloatingLayoutSession_1.FloatingLayoutSession(props);
|
|
12
|
-
}
|
|
13
|
-
deserializeLayoutInClient(json) {
|
|
14
|
-
return new Layout_1.PrecomputedFloatingLayout(json);
|
|
15
|
-
}
|
|
16
|
-
}
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exports.default = LollipopRenderer;
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@@ -1,87 +0,0 @@
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"use strict";
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var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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const jsx_runtime_1 = require("react/jsx-runtime");
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const configuration_1 = require("@jbrowse/core/configuration");
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const mobx_react_1 = require("mobx-react");
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const ScoreText_1 = __importDefault(require("./ScoreText"));
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const Lollipop = (0, mobx_react_1.observer)(function Lollipop(props) {
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const { feature, config, layoutRecord, selectedFeatureId } = props;
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const { anchorLocation, y, data: { radiusPx }, } = layoutRecord;
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const styleOuter = {
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fill: (0, configuration_1.readConfObject)(config, 'strokeColor', { feature }),
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};
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if (String(selectedFeatureId) === String(feature.id())) {
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styleOuter.fill = 'red';
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}
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const styleInner = {
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fill: (0, configuration_1.readConfObject)(config, 'innerColor', { feature }),
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};
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const strokeWidth = (0, configuration_1.readConfObject)(config, 'strokeWidth', { feature });
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return ((0, jsx_runtime_1.jsxs)("g", { "data-testid": feature.id(), children: [(0, jsx_runtime_1.jsx)("title", { children: (0, configuration_1.readConfObject)(config, 'caption', { feature }) }), (0, jsx_runtime_1.jsx)("circle", { cx: anchorLocation, cy: y + radiusPx, r: radiusPx, style: styleOuter, onMouseDown: (event) => {
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const { onFeatureMouseDown: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseEnter: (event) => {
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const { onFeatureMouseEnter: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseOut: (event) => {
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const { onFeatureMouseOut: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseOver: (event) => {
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const { onFeatureMouseOver: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseUp: (event) => {
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const { onFeatureMouseUp: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseLeave: (event) => {
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const { onFeatureMouseLeave: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseMove: (event) => {
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const { onFeatureMouseMove: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onClick: (event) => {
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const { onFeatureClick: handler, feature } = props;
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event.stopPropagation();
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onFocus: (event) => {
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const { onFeatureMouseOver: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onBlur: (event) => {
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const { onFeatureMouseOut: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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} }), radiusPx - strokeWidth <= 2 ? null : ((0, jsx_runtime_1.jsx)("circle", { cx: anchorLocation, cy: y + radiusPx, r: radiusPx - strokeWidth, style: styleInner, onMouseDown: (event) => {
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const { onFeatureMouseDown: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseEnter: (event) => {
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const { onFeatureMouseEnter: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseOut: (event) => {
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const { onFeatureMouseOut: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseOver: (event) => {
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const { onFeatureMouseOver: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseUp: (event) => {
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const { onFeatureMouseUp: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseLeave: (event) => {
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const { onFeatureMouseLeave: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onMouseMove: (event) => {
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const { onFeatureMouseMove: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onClick: (event) => {
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const { onFeatureClick: handler, feature } = props;
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event.stopPropagation();
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onFocus: (event) => {
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const { onFeatureMouseOver: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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}, onBlur: (event) => {
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const { onFeatureMouseOut: handler, feature } = props;
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return handler === null || handler === void 0 ? void 0 : handler(event, feature.id());
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} })), (0, jsx_runtime_1.jsx)(ScoreText_1.default, { feature: feature, config: config, layoutRecord: layoutRecord })] }));
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});
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87
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exports.default = Lollipop;
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