@jbrowse/plugin-lollipop 3.6.5 → 4.0.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (44) hide show
  1. package/esm/LinearLollipopDisplay/configSchema.d.ts +4 -4
  2. package/esm/LinearLollipopDisplay/index.js +2 -2
  3. package/esm/LinearLollipopDisplay/model.d.ts +955 -78
  4. package/esm/LinearLollipopDisplay/model.js +1 -2
  5. package/esm/LollipopRenderer/Layout.d.ts +8 -32
  6. package/esm/LollipopRenderer/Layout.js +4 -43
  7. package/esm/LollipopRenderer/LollipopRenderer.d.ts +2 -7
  8. package/esm/LollipopRenderer/LollipopRenderer.js +2 -10
  9. package/esm/LollipopRenderer/components/Lollipop.d.ts +17 -1
  10. package/esm/LollipopRenderer/components/Lollipop.js +27 -75
  11. package/esm/LollipopRenderer/components/LollipopRendering.js +29 -33
  12. package/esm/LollipopRenderer/components/Stick.d.ts +2 -7
  13. package/esm/LollipopRenderer/configSchema.d.ts +2 -2
  14. package/esm/LollipopRenderer/index.js +4 -4
  15. package/esm/index.js +3 -6
  16. package/package.json +23 -29
  17. package/dist/LinearLollipopDisplay/configSchema.d.ts +0 -31
  18. package/dist/LinearLollipopDisplay/configSchema.js +0 -13
  19. package/dist/LinearLollipopDisplay/index.d.ts +0 -2
  20. package/dist/LinearLollipopDisplay/index.js +0 -20
  21. package/dist/LinearLollipopDisplay/model.d.ts +0 -299
  22. package/dist/LinearLollipopDisplay/model.js +0 -34
  23. package/dist/LollipopRenderer/FloatingLayoutSession.d.ts +0 -6
  24. package/dist/LollipopRenderer/FloatingLayoutSession.js +0 -17
  25. package/dist/LollipopRenderer/Layout.d.ts +0 -54
  26. package/dist/LollipopRenderer/Layout.js +0 -113
  27. package/dist/LollipopRenderer/LollipopRenderer.d.ts +0 -8
  28. package/dist/LollipopRenderer/LollipopRenderer.js +0 -17
  29. package/dist/LollipopRenderer/components/Lollipop.d.ts +0 -2
  30. package/dist/LollipopRenderer/components/Lollipop.js +0 -87
  31. package/dist/LollipopRenderer/components/LollipopRendering.d.ts +0 -2
  32. package/dist/LollipopRenderer/components/LollipopRendering.js +0 -81
  33. package/dist/LollipopRenderer/components/ScoreText.d.ts +0 -14
  34. package/dist/LollipopRenderer/components/ScoreText.js +0 -20
  35. package/dist/LollipopRenderer/components/Stick.d.ts +0 -14
  36. package/dist/LollipopRenderer/components/Stick.js +0 -9
  37. package/dist/LollipopRenderer/configSchema.d.ts +0 -56
  38. package/dist/LollipopRenderer/configSchema.js +0 -58
  39. package/dist/LollipopRenderer/index.d.ts +0 -2
  40. package/dist/LollipopRenderer/index.js +0 -17
  41. package/dist/index.d.ts +0 -6
  42. package/dist/index.js +0 -19
  43. package/esm/LollipopRenderer/FloatingLayoutSession.d.ts +0 -6
  44. package/esm/LollipopRenderer/FloatingLayoutSession.js +0 -13
@@ -1,27 +1,27 @@
1
1
  import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
2
- export declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
3
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
4
- type: import("mobx-state-tree").ISimpleType<string>;
5
- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
2
+ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): import("@jbrowse/mobx-state-tree").IModelType<{
3
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
4
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
5
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
6
6
  } & {
7
- heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
7
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
8
8
  } & {
9
- userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
10
- userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
9
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
10
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
11
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  } & {
12
- blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
13
- key: import("mobx-state-tree").ISimpleType<string>;
14
- region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
15
- reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
16
- isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
17
- isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
12
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
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+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
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+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
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+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
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  }, {
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- stopToken: string | undefined;
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+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
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  filled: boolean;
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  reactElement: React.ReactElement | undefined;
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  features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
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  layout: any;
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- status: string;
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+ blockStatusMessage: string;
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  error: unknown;
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  message: string | undefined;
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  maxHeightReached: boolean;
@@ -29,25 +29,32 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
29
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  model: {
30
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  error?: unknown;
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  reload: () => void;
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- message: React.ReactNode;
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- filled?: boolean;
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- status?: string;
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+ message?: React.ReactNode;
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+ statusMessage?: string;
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  reactElement?: React.ReactElement;
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+ isRenderingPending?: boolean;
36
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  };
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- }) => import("react/jsx-runtime").JSX.Element | undefined;
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+ }) => import("react/jsx-runtime").JSX.Element;
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  renderProps: any;
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+ renderArgs: Record<string, unknown> | undefined;
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+ isRenderingPending: boolean;
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+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
39
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  } & {
40
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  doReload(): void;
41
- afterAttach(): void;
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- setStatus(message: string): void;
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- setLoading(newStopToken: string): void;
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+ setStatusMessage(message: string): void;
45
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
44
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  setMessage(messageText: string): void;
45
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  setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
46
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  setError(error: unknown): void;
47
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  reload(): void;
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+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
48
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  beforeDestroy(): void;
49
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
50
- configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
52
+ } & {
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+ readonly statusMessage: any;
54
+ } & {
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+ afterAttach(): void;
56
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
51
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  maxFeatureScreenDensity: {
52
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  type: string;
53
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  description: string;
@@ -74,33 +81,35 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
74
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  description: string;
75
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  defaultValue: never[];
76
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  };
77
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
84
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
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+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
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+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
78
87
  } & {
79
- type: import("mobx-state-tree").ISimpleType<"LinearLollipopDisplay">;
88
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<"LinearLollipopDisplay">;
80
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  configuration: AnyConfigurationSchemaType;
81
90
  }, {
82
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  rendererTypeName: string;
83
92
  error: unknown;
84
- message: string | undefined;
93
+ statusMessage: string | undefined;
85
94
  } & {
86
95
  readonly RenderingComponent: React.FC<{
87
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  model: {
88
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  id: string;
89
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  type: string;
90
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  rpcDriverName: string | undefined;
91
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
100
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
92
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  rendererTypeName: string;
93
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  error: unknown;
94
- message: string | undefined;
95
- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
96
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
97
- type: import("mobx-state-tree").ISimpleType<string>;
98
- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
103
+ statusMessage: string | undefined;
104
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
105
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
106
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
99
108
  }, {
100
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  rendererTypeName: string;
101
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  error: unknown;
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- message: string | undefined;
103
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
111
+ statusMessage: string | undefined;
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+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
104
113
  onHorizontalScroll?: () => void;
105
114
  blockState?: Record<string, any>;
106
115
  }>;
@@ -109,30 +118,142 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
109
118
  id: string;
110
119
  type: string;
111
120
  rpcDriverName: string | undefined;
112
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
121
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
113
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  rendererTypeName: string;
114
123
  error: unknown;
115
- message: string | undefined;
116
- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
117
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
118
- type: import("mobx-state-tree").ISimpleType<string>;
119
- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
124
+ statusMessage: string | undefined;
125
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
126
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
127
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
128
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
120
129
  }, {
121
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  rendererTypeName: string;
122
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  error: unknown;
123
- message: string | undefined;
124
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
132
+ statusMessage: string | undefined;
133
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
125
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  }> | null;
126
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  readonly adapterConfig: any;
127
- readonly parentTrack: any;
136
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
137
+ readonly parentDisplay: any;
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+ readonly effectiveRpcDriverName: any;
139
+ } & {
128
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  renderProps(): any;
141
+ renderingProps(): {
142
+ displayModel: {
143
+ id: string;
144
+ type: string;
145
+ rpcDriverName: string | undefined;
146
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
147
+ rendererTypeName: string;
148
+ error: unknown;
149
+ statusMessage: string | undefined;
150
+ } & {
151
+ readonly RenderingComponent: React.FC<{
152
+ model: {
153
+ id: string;
154
+ type: string;
155
+ rpcDriverName: string | undefined;
156
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
157
+ rendererTypeName: string;
158
+ error: unknown;
159
+ statusMessage: string | undefined;
160
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
161
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
162
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
163
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
164
+ }, {
165
+ rendererTypeName: string;
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+ error: unknown;
167
+ statusMessage: string | undefined;
168
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
169
+ onHorizontalScroll?: () => void;
170
+ blockState?: Record<string, any>;
171
+ }>;
172
+ readonly DisplayBlurb: React.FC<{
173
+ model: {
174
+ id: string;
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+ type: string;
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+ rpcDriverName: string | undefined;
177
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
178
+ rendererTypeName: string;
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+ error: unknown;
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+ statusMessage: string | undefined;
181
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
182
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
183
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
184
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
185
+ }, {
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+ rendererTypeName: string;
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+ error: unknown;
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+ statusMessage: string | undefined;
189
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
190
+ }> | null;
191
+ readonly adapterConfig: any;
192
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
193
+ readonly parentDisplay: any;
194
+ readonly effectiveRpcDriverName: any;
195
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
196
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
197
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
198
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
199
+ }, {
200
+ rendererTypeName: string;
201
+ error: unknown;
202
+ statusMessage: string | undefined;
203
+ } & {
204
+ readonly RenderingComponent: React.FC<{
205
+ model: {
206
+ id: string;
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+ type: string;
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+ rpcDriverName: string | undefined;
209
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
210
+ rendererTypeName: string;
211
+ error: unknown;
212
+ statusMessage: string | undefined;
213
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
214
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
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+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
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+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
217
+ }, {
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+ rendererTypeName: string;
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+ error: unknown;
220
+ statusMessage: string | undefined;
221
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
222
+ onHorizontalScroll?: () => void;
223
+ blockState?: Record<string, any>;
224
+ }>;
225
+ readonly DisplayBlurb: React.FC<{
226
+ model: {
227
+ id: string;
228
+ type: string;
229
+ rpcDriverName: string | undefined;
230
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
231
+ rendererTypeName: string;
232
+ error: unknown;
233
+ statusMessage: string | undefined;
234
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
235
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
236
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
237
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
238
+ }, {
239
+ rendererTypeName: string;
240
+ error: unknown;
241
+ statusMessage: string | undefined;
242
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
243
+ }> | null;
244
+ readonly adapterConfig: any;
245
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
246
+ readonly parentDisplay: any;
247
+ readonly effectiveRpcDriverName: any;
248
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
249
+ };
129
250
  readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
130
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  readonly DisplayMessageComponent: undefined | React.FC<any>;
131
252
  trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
132
253
  readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
133
254
  regionCannotBeRendered(): null;
134
255
  } & {
135
- setMessage(arg?: string): void;
256
+ setStatusMessage(arg?: string): void;
136
257
  setError(error?: unknown): void;
137
258
  setRpcDriverName(rpcDriverName: string): void;
138
259
  reload(): void;
@@ -167,11 +288,13 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
167
288
  readonly regionTooLarge: boolean;
168
289
  readonly regionTooLargeReason: string;
169
290
  } & {
170
- readonly statsReadyAndRegionNotTooLarge: boolean;
291
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
171
292
  regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
172
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  regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
173
294
  } & {
295
+ mouseoverExtraInformation: string | undefined;
174
296
  featureIdUnderMouse: undefined | string;
297
+ subfeatureIdUnderMouse: undefined | string;
175
298
  contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
176
299
  } & {
177
300
  readonly DisplayMessageComponent: undefined | React.FC<any>;
@@ -180,14 +303,23 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
180
303
  } & {
181
304
  readonly renderDelay: number;
182
305
  readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
306
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
307
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
183
308
  readonly selectedFeatureId: string | undefined;
184
- copyInfoToClipboard(feature: import("@jbrowse/core/util").Feature): void;
309
+ readonly featureWidgetType: {
310
+ type: string;
311
+ id: string;
312
+ };
185
313
  } & {
314
+ readonly showTooltipsEnabled: boolean;
186
315
  readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
187
316
  readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
317
+ getFeatureById(featureId: string, parentFeatureId?: string): import("@jbrowse/core/util").Feature | undefined;
318
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord>;
188
319
  getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
189
- getFeatureByID(blockKey: string, id: string): [number, number, number, number] | undefined;
190
- searchFeatureByID(id: string): [number, number, number, number] | undefined;
320
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord | undefined;
321
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord | undefined;
322
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util").FeatureLabelData>;
191
323
  } & {
192
324
  addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
193
325
  deleteBlock(key: string): void;
@@ -195,12 +327,746 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
195
327
  navToFeature(feature: import("@jbrowse/core/util").Feature): void;
196
328
  clearFeatureSelection(): void;
197
329
  setFeatureIdUnderMouse(feature?: string): void;
330
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
198
331
  setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
332
+ setMouseoverExtraInformation(extra?: string): void;
333
+ setShowLegend(s: boolean): void;
334
+ setShowTooltips(arg: boolean): void;
199
335
  } & {
200
336
  reload(): Promise<void>;
337
+ } & {
338
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
339
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
201
340
  } & {
202
341
  trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
203
342
  contextMenuItems(): import("@jbrowse/core/ui").MenuItem[];
343
+ renderingProps(): {
344
+ displayModel: {
345
+ id: string;
346
+ type: string;
347
+ rpcDriverName: string | undefined;
348
+ heightPreConfig: number | undefined;
349
+ userBpPerPxLimit: number | undefined;
350
+ userByteSizeLimit: number | undefined;
351
+ blockState: import("@jbrowse/mobx-state-tree").IMSTMap<import("@jbrowse/mobx-state-tree").IModelType<{
352
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
353
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
354
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
355
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
356
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
357
+ }, {
358
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
359
+ filled: boolean;
360
+ reactElement: React.ReactElement | undefined;
361
+ features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
362
+ layout: any;
363
+ blockStatusMessage: string;
364
+ error: unknown;
365
+ message: string | undefined;
366
+ maxHeightReached: boolean;
367
+ ReactComponent: ({ model, }: {
368
+ model: {
369
+ error?: unknown;
370
+ reload: () => void;
371
+ message?: React.ReactNode;
372
+ statusMessage?: string;
373
+ reactElement?: React.ReactElement;
374
+ isRenderingPending?: boolean;
375
+ };
376
+ }) => import("react/jsx-runtime").JSX.Element;
377
+ renderProps: any;
378
+ renderArgs: Record<string, unknown> | undefined;
379
+ isRenderingPending: boolean;
380
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
381
+ } & {
382
+ doReload(): void;
383
+ setStatusMessage(message: string): void;
384
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
385
+ setMessage(messageText: string): void;
386
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
387
+ setError(error: unknown): void;
388
+ reload(): void;
389
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
390
+ beforeDestroy(): void;
391
+ } & {
392
+ readonly statusMessage: any;
393
+ } & {
394
+ afterAttach(): void;
395
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
396
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
397
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
398
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
399
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
400
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
401
+ }, {
402
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
403
+ filled: boolean;
404
+ reactElement: React.ReactElement | undefined;
405
+ features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
406
+ layout: any;
407
+ blockStatusMessage: string;
408
+ error: unknown;
409
+ message: string | undefined;
410
+ maxHeightReached: boolean;
411
+ ReactComponent: ({ model, }: {
412
+ model: {
413
+ error?: unknown;
414
+ reload: () => void;
415
+ message?: React.ReactNode;
416
+ statusMessage?: string;
417
+ reactElement?: React.ReactElement;
418
+ isRenderingPending?: boolean;
419
+ };
420
+ }) => import("react/jsx-runtime").JSX.Element;
421
+ renderProps: any;
422
+ renderArgs: Record<string, unknown> | undefined;
423
+ isRenderingPending: boolean;
424
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
425
+ } & {
426
+ doReload(): void;
427
+ setStatusMessage(message: string): void;
428
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
429
+ setMessage(messageText: string): void;
430
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
431
+ setError(error: unknown): void;
432
+ reload(): void;
433
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
434
+ beforeDestroy(): void;
435
+ } & {
436
+ readonly statusMessage: any;
437
+ } & {
438
+ afterAttach(): void;
439
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
440
+ configuration: {
441
+ [x: string]: any;
442
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
443
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
444
+ [x: string]: any;
445
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
446
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
447
+ [x: string]: any;
448
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
449
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
450
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
451
+ maxFeatureScreenDensity: {
452
+ type: string;
453
+ description: string;
454
+ defaultValue: number;
455
+ };
456
+ fetchSizeLimit: {
457
+ type: string;
458
+ defaultValue: number;
459
+ description: string;
460
+ };
461
+ height: {
462
+ type: string;
463
+ defaultValue: number;
464
+ description: string;
465
+ };
466
+ mouseover: {
467
+ type: string;
468
+ description: string;
469
+ defaultValue: string;
470
+ contextVariable: string[];
471
+ };
472
+ jexlFilters: {
473
+ type: string;
474
+ description: string;
475
+ defaultValue: never[];
476
+ };
477
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>>;
478
+ showLegend: boolean | undefined;
479
+ showTooltips: boolean | undefined;
480
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
481
+ rendererTypeName: string;
482
+ error: unknown;
483
+ statusMessage: string | undefined;
484
+ } & {
485
+ readonly RenderingComponent: React.FC<{
486
+ model: {
487
+ id: string;
488
+ type: string;
489
+ rpcDriverName: string | undefined;
490
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
491
+ rendererTypeName: string;
492
+ error: unknown;
493
+ statusMessage: string | undefined;
494
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
495
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
496
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
497
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
498
+ }, {
499
+ rendererTypeName: string;
500
+ error: unknown;
501
+ statusMessage: string | undefined;
502
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
503
+ onHorizontalScroll?: () => void;
504
+ blockState?: Record<string, any>;
505
+ }>;
506
+ readonly DisplayBlurb: React.FC<{
507
+ model: {
508
+ id: string;
509
+ type: string;
510
+ rpcDriverName: string | undefined;
511
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
512
+ rendererTypeName: string;
513
+ error: unknown;
514
+ statusMessage: string | undefined;
515
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
516
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
517
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
518
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
519
+ }, {
520
+ rendererTypeName: string;
521
+ error: unknown;
522
+ statusMessage: string | undefined;
523
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
524
+ }> | null;
525
+ readonly adapterConfig: any;
526
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
527
+ readonly parentDisplay: any;
528
+ readonly effectiveRpcDriverName: any;
529
+ } & {
530
+ renderProps(): any;
531
+ renderingProps(): {
532
+ displayModel: {
533
+ id: string;
534
+ type: string;
535
+ rpcDriverName: string | undefined;
536
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
537
+ rendererTypeName: string;
538
+ error: unknown;
539
+ statusMessage: string | undefined;
540
+ } & {
541
+ readonly RenderingComponent: React.FC<{
542
+ model: {
543
+ id: string;
544
+ type: string;
545
+ rpcDriverName: string | undefined;
546
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
547
+ rendererTypeName: string;
548
+ error: unknown;
549
+ statusMessage: string | undefined;
550
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
551
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
552
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
553
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
554
+ }, {
555
+ rendererTypeName: string;
556
+ error: unknown;
557
+ statusMessage: string | undefined;
558
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
559
+ onHorizontalScroll?: () => void;
560
+ blockState?: Record<string, any>;
561
+ }>;
562
+ readonly DisplayBlurb: React.FC<{
563
+ model: {
564
+ id: string;
565
+ type: string;
566
+ rpcDriverName: string | undefined;
567
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
568
+ rendererTypeName: string;
569
+ error: unknown;
570
+ statusMessage: string | undefined;
571
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
572
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
573
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
574
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
575
+ }, {
576
+ rendererTypeName: string;
577
+ error: unknown;
578
+ statusMessage: string | undefined;
579
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
580
+ }> | null;
581
+ readonly adapterConfig: any;
582
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
583
+ readonly parentDisplay: any;
584
+ readonly effectiveRpcDriverName: any;
585
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
586
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
587
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
588
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
589
+ }, {
590
+ rendererTypeName: string;
591
+ error: unknown;
592
+ statusMessage: string | undefined;
593
+ } & {
594
+ readonly RenderingComponent: React.FC<{
595
+ model: {
596
+ id: string;
597
+ type: string;
598
+ rpcDriverName: string | undefined;
599
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
600
+ rendererTypeName: string;
601
+ error: unknown;
602
+ statusMessage: string | undefined;
603
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
604
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
605
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
606
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
607
+ }, {
608
+ rendererTypeName: string;
609
+ error: unknown;
610
+ statusMessage: string | undefined;
611
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
612
+ onHorizontalScroll?: () => void;
613
+ blockState?: Record<string, any>;
614
+ }>;
615
+ readonly DisplayBlurb: React.FC<{
616
+ model: {
617
+ id: string;
618
+ type: string;
619
+ rpcDriverName: string | undefined;
620
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
621
+ rendererTypeName: string;
622
+ error: unknown;
623
+ statusMessage: string | undefined;
624
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
625
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
626
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
627
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
628
+ }, {
629
+ rendererTypeName: string;
630
+ error: unknown;
631
+ statusMessage: string | undefined;
632
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
633
+ }> | null;
634
+ readonly adapterConfig: any;
635
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
636
+ readonly parentDisplay: any;
637
+ readonly effectiveRpcDriverName: any;
638
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
639
+ };
640
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
641
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
642
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
643
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
644
+ regionCannotBeRendered(): null;
645
+ } & {
646
+ setStatusMessage(arg?: string): void;
647
+ setError(error?: unknown): void;
648
+ setRpcDriverName(rpcDriverName: string): void;
649
+ reload(): void;
650
+ } & {
651
+ scrollTop: number;
652
+ } & {
653
+ readonly height: number;
654
+ } & {
655
+ setScrollTop(scrollTop: number): void;
656
+ setHeight(displayHeight: number): number;
657
+ resizeHeight(distance: number): number;
658
+ } & {
659
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
660
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
661
+ currStatsBpPerPx: number;
662
+ } & {
663
+ readonly currentBytesRequested: number;
664
+ readonly currentFeatureScreenDensity: number;
665
+ readonly maxFeatureScreenDensity: any;
666
+ readonly featureDensityStatsReady: boolean;
667
+ readonly maxAllowableBytes: number;
668
+ } & {
669
+ afterAttach(): void;
670
+ } & {
671
+ setCurrStatsBpPerPx(n: number): void;
672
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
673
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
674
+ setFeatureDensityStatsP(arg: any): void;
675
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
676
+ clearFeatureDensityStats(): void;
677
+ } & {
678
+ readonly regionTooLarge: boolean;
679
+ readonly regionTooLargeReason: string;
680
+ } & {
681
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
682
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
683
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
684
+ } & {
685
+ mouseoverExtraInformation: string | undefined;
686
+ featureIdUnderMouse: undefined | string;
687
+ subfeatureIdUnderMouse: undefined | string;
688
+ contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
689
+ } & {
690
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
691
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
692
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
693
+ } & {
694
+ readonly renderDelay: number;
695
+ readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
696
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
697
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
698
+ readonly selectedFeatureId: string | undefined;
699
+ readonly featureWidgetType: {
700
+ type: string;
701
+ id: string;
702
+ };
703
+ } & {
704
+ readonly showTooltipsEnabled: boolean;
705
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
706
+ readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
707
+ getFeatureById(featureId: string, parentFeatureId?: string): import("@jbrowse/core/util").Feature | undefined;
708
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord>;
709
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
710
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord | undefined;
711
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord | undefined;
712
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util").FeatureLabelData>;
713
+ } & {
714
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
715
+ deleteBlock(key: string): void;
716
+ selectFeature(feature: import("@jbrowse/core/util").Feature): void;
717
+ navToFeature(feature: import("@jbrowse/core/util").Feature): void;
718
+ clearFeatureSelection(): void;
719
+ setFeatureIdUnderMouse(feature?: string): void;
720
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
721
+ setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
722
+ setMouseoverExtraInformation(extra?: string): void;
723
+ setShowLegend(s: boolean): void;
724
+ setShowTooltips(arg: boolean): void;
725
+ } & {
726
+ reload(): Promise<void>;
727
+ } & {
728
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
729
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
730
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
731
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
732
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
733
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
734
+ } & {
735
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
736
+ } & {
737
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
738
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
739
+ } & {
740
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
741
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
742
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
743
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
744
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
745
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
746
+ }, {
747
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
748
+ filled: boolean;
749
+ reactElement: React.ReactElement | undefined;
750
+ features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
751
+ layout: any;
752
+ blockStatusMessage: string;
753
+ error: unknown;
754
+ message: string | undefined;
755
+ maxHeightReached: boolean;
756
+ ReactComponent: ({ model, }: {
757
+ model: {
758
+ error?: unknown;
759
+ reload: () => void;
760
+ message?: React.ReactNode;
761
+ statusMessage?: string;
762
+ reactElement?: React.ReactElement;
763
+ isRenderingPending?: boolean;
764
+ };
765
+ }) => import("react/jsx-runtime").JSX.Element;
766
+ renderProps: any;
767
+ renderArgs: Record<string, unknown> | undefined;
768
+ isRenderingPending: boolean;
769
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
770
+ } & {
771
+ doReload(): void;
772
+ setStatusMessage(message: string): void;
773
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
774
+ setMessage(messageText: string): void;
775
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
776
+ setError(error: unknown): void;
777
+ reload(): void;
778
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
779
+ beforeDestroy(): void;
780
+ } & {
781
+ readonly statusMessage: any;
782
+ } & {
783
+ afterAttach(): void;
784
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
785
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
786
+ maxFeatureScreenDensity: {
787
+ type: string;
788
+ description: string;
789
+ defaultValue: number;
790
+ };
791
+ fetchSizeLimit: {
792
+ type: string;
793
+ defaultValue: number;
794
+ description: string;
795
+ };
796
+ height: {
797
+ type: string;
798
+ defaultValue: number;
799
+ description: string;
800
+ };
801
+ mouseover: {
802
+ type: string;
803
+ description: string;
804
+ defaultValue: string;
805
+ contextVariable: string[];
806
+ };
807
+ jexlFilters: {
808
+ type: string;
809
+ description: string;
810
+ defaultValue: never[];
811
+ };
812
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
813
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
814
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
815
+ }, {
816
+ rendererTypeName: string;
817
+ error: unknown;
818
+ statusMessage: string | undefined;
819
+ } & {
820
+ readonly RenderingComponent: React.FC<{
821
+ model: {
822
+ id: string;
823
+ type: string;
824
+ rpcDriverName: string | undefined;
825
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
826
+ rendererTypeName: string;
827
+ error: unknown;
828
+ statusMessage: string | undefined;
829
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
830
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
831
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
832
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
833
+ }, {
834
+ rendererTypeName: string;
835
+ error: unknown;
836
+ statusMessage: string | undefined;
837
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
838
+ onHorizontalScroll?: () => void;
839
+ blockState?: Record<string, any>;
840
+ }>;
841
+ readonly DisplayBlurb: React.FC<{
842
+ model: {
843
+ id: string;
844
+ type: string;
845
+ rpcDriverName: string | undefined;
846
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
847
+ rendererTypeName: string;
848
+ error: unknown;
849
+ statusMessage: string | undefined;
850
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
851
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
852
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
853
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
854
+ }, {
855
+ rendererTypeName: string;
856
+ error: unknown;
857
+ statusMessage: string | undefined;
858
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
859
+ }> | null;
860
+ readonly adapterConfig: any;
861
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
862
+ readonly parentDisplay: any;
863
+ readonly effectiveRpcDriverName: any;
864
+ } & {
865
+ renderProps(): any;
866
+ renderingProps(): {
867
+ displayModel: {
868
+ id: string;
869
+ type: string;
870
+ rpcDriverName: string | undefined;
871
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
872
+ rendererTypeName: string;
873
+ error: unknown;
874
+ statusMessage: string | undefined;
875
+ } & {
876
+ readonly RenderingComponent: React.FC<{
877
+ model: {
878
+ id: string;
879
+ type: string;
880
+ rpcDriverName: string | undefined;
881
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
882
+ rendererTypeName: string;
883
+ error: unknown;
884
+ statusMessage: string | undefined;
885
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
886
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
887
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
888
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
889
+ }, {
890
+ rendererTypeName: string;
891
+ error: unknown;
892
+ statusMessage: string | undefined;
893
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
894
+ onHorizontalScroll?: () => void;
895
+ blockState?: Record<string, any>;
896
+ }>;
897
+ readonly DisplayBlurb: React.FC<{
898
+ model: {
899
+ id: string;
900
+ type: string;
901
+ rpcDriverName: string | undefined;
902
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
903
+ rendererTypeName: string;
904
+ error: unknown;
905
+ statusMessage: string | undefined;
906
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
907
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
908
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
909
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
910
+ }, {
911
+ rendererTypeName: string;
912
+ error: unknown;
913
+ statusMessage: string | undefined;
914
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
915
+ }> | null;
916
+ readonly adapterConfig: any;
917
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
918
+ readonly parentDisplay: any;
919
+ readonly effectiveRpcDriverName: any;
920
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
921
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
922
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
923
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
924
+ }, {
925
+ rendererTypeName: string;
926
+ error: unknown;
927
+ statusMessage: string | undefined;
928
+ } & {
929
+ readonly RenderingComponent: React.FC<{
930
+ model: {
931
+ id: string;
932
+ type: string;
933
+ rpcDriverName: string | undefined;
934
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
935
+ rendererTypeName: string;
936
+ error: unknown;
937
+ statusMessage: string | undefined;
938
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
939
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
940
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
941
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
942
+ }, {
943
+ rendererTypeName: string;
944
+ error: unknown;
945
+ statusMessage: string | undefined;
946
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
947
+ onHorizontalScroll?: () => void;
948
+ blockState?: Record<string, any>;
949
+ }>;
950
+ readonly DisplayBlurb: React.FC<{
951
+ model: {
952
+ id: string;
953
+ type: string;
954
+ rpcDriverName: string | undefined;
955
+ } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
956
+ rendererTypeName: string;
957
+ error: unknown;
958
+ statusMessage: string | undefined;
959
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
960
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
961
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
962
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
963
+ }, {
964
+ rendererTypeName: string;
965
+ error: unknown;
966
+ statusMessage: string | undefined;
967
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
968
+ }> | null;
969
+ readonly adapterConfig: any;
970
+ readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
971
+ readonly parentDisplay: any;
972
+ readonly effectiveRpcDriverName: any;
973
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
974
+ };
975
+ readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
976
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
977
+ trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
978
+ readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
979
+ regionCannotBeRendered(): null;
980
+ } & {
981
+ setStatusMessage(arg?: string): void;
982
+ setError(error?: unknown): void;
983
+ setRpcDriverName(rpcDriverName: string): void;
984
+ reload(): void;
985
+ } & {
986
+ scrollTop: number;
987
+ } & {
988
+ readonly height: number;
989
+ } & {
990
+ setScrollTop(scrollTop: number): void;
991
+ setHeight(displayHeight: number): number;
992
+ resizeHeight(distance: number): number;
993
+ } & {
994
+ featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
995
+ featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
996
+ currStatsBpPerPx: number;
997
+ } & {
998
+ readonly currentBytesRequested: number;
999
+ readonly currentFeatureScreenDensity: number;
1000
+ readonly maxFeatureScreenDensity: any;
1001
+ readonly featureDensityStatsReady: boolean;
1002
+ readonly maxAllowableBytes: number;
1003
+ } & {
1004
+ afterAttach(): void;
1005
+ } & {
1006
+ setCurrStatsBpPerPx(n: number): void;
1007
+ setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1008
+ getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
1009
+ setFeatureDensityStatsP(arg: any): void;
1010
+ setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
1011
+ clearFeatureDensityStats(): void;
1012
+ } & {
1013
+ readonly regionTooLarge: boolean;
1014
+ readonly regionTooLargeReason: string;
1015
+ } & {
1016
+ readonly featureDensityStatsReadyAndRegionNotTooLarge: boolean;
1017
+ regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
1018
+ regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react/jsx-runtime").JSX.Element | null;
1019
+ } & {
1020
+ mouseoverExtraInformation: string | undefined;
1021
+ featureIdUnderMouse: undefined | string;
1022
+ subfeatureIdUnderMouse: undefined | string;
1023
+ contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
1024
+ } & {
1025
+ readonly DisplayMessageComponent: undefined | React.FC<any>;
1026
+ readonly blockType: "staticBlocks" | "dynamicBlocks";
1027
+ readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
1028
+ } & {
1029
+ readonly renderDelay: number;
1030
+ readonly TooltipComponent: import("@jbrowse/core/util").AnyReactComponentType;
1031
+ legendItems(_theme?: import("@mui/material").Theme): import("@jbrowse/plugin-linear-genome-view").LegendItem[];
1032
+ svgLegendWidth(theme?: import("@mui/material").Theme): number;
1033
+ readonly selectedFeatureId: string | undefined;
1034
+ readonly featureWidgetType: {
1035
+ type: string;
1036
+ id: string;
1037
+ };
1038
+ } & {
1039
+ readonly showTooltipsEnabled: boolean;
1040
+ readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
1041
+ readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
1042
+ getFeatureById(featureId: string, parentFeatureId?: string): import("@jbrowse/core/util").Feature | undefined;
1043
+ readonly layoutFeatures: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord>;
1044
+ getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
1045
+ getFeatureByID(blockKey: string, id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord | undefined;
1046
+ searchFeatureByID(id: string): import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/types").LayoutRecord | undefined;
1047
+ readonly floatingLabelData: Map<string, import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/components/util").FeatureLabelData>;
1048
+ } & {
1049
+ addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
1050
+ deleteBlock(key: string): void;
1051
+ selectFeature(feature: import("@jbrowse/core/util").Feature): void;
1052
+ navToFeature(feature: import("@jbrowse/core/util").Feature): void;
1053
+ clearFeatureSelection(): void;
1054
+ setFeatureIdUnderMouse(feature?: string): void;
1055
+ setSubfeatureIdUnderMouse(subfeatureId?: string): void;
1056
+ setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
1057
+ setMouseoverExtraInformation(extra?: string): void;
1058
+ setShowLegend(s: boolean): void;
1059
+ setShowTooltips(arg: boolean): void;
1060
+ } & {
1061
+ reload(): Promise<void>;
1062
+ } & {
1063
+ selectFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1064
+ setContextMenuFeatureById: (featureId: string, parentFeatureId?: string | undefined, topLevelFeatureId?: string | undefined) => Promise<void>;
1065
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1066
+ onMouseMove(_: unknown, featureId?: string): void;
1067
+ onMouseLeave(_: unknown): void;
1068
+ onContextMenu(_: unknown): void;
1069
+ };
204
1070
  renderProps(): any;
205
1071
  } & {
206
1072
  renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react/jsx-runtime").JSX.Element>;
@@ -212,29 +1078,29 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
212
1078
  readonly rendererTypeName: any;
213
1079
  }, {
214
1080
  type: string;
215
- } & Partial<import("mobx-state-tree/dist/internal").ExtractCFromProps<{
216
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
217
- type: import("mobx-state-tree").ISimpleType<string>;
218
- rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
1081
+ } & Partial<import("@jbrowse/mobx-state-tree/dist/internal").ExtractCFromProps<{
1082
+ id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
1083
+ type: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1084
+ rpcDriverName: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<string>>;
219
1085
  } & {
220
- heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
1086
+ heightPreConfig: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
221
1087
  } & {
222
- userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
223
- userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
1088
+ userBpPerPxLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
1089
+ userByteSizeLimit: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<number>>;
224
1090
  } & {
225
- blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
226
- key: import("mobx-state-tree").ISimpleType<string>;
227
- region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
228
- reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
229
- isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
230
- isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1091
+ blockState: import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
1092
+ key: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
1093
+ region: import("@jbrowse/mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
1094
+ reloadFlag: import("@jbrowse/mobx-state-tree").IType<number | undefined, number, number>;
1095
+ isLeftEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
1096
+ isRightEndOfDisplayedRegion: import("@jbrowse/mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
231
1097
  }, {
232
- stopToken: string | undefined;
1098
+ stopToken: import("@jbrowse/core/util").StopToken | undefined;
233
1099
  filled: boolean;
234
1100
  reactElement: React.ReactElement | undefined;
235
1101
  features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
236
1102
  layout: any;
237
- status: string;
1103
+ blockStatusMessage: string;
238
1104
  error: unknown;
239
1105
  message: string | undefined;
240
1106
  maxHeightReached: boolean;
@@ -242,25 +1108,32 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
242
1108
  model: {
243
1109
  error?: unknown;
244
1110
  reload: () => void;
245
- message: React.ReactNode;
246
- filled?: boolean;
247
- status?: string;
1111
+ message?: React.ReactNode;
1112
+ statusMessage?: string;
248
1113
  reactElement?: React.ReactElement;
1114
+ isRenderingPending?: boolean;
249
1115
  };
250
- }) => import("react/jsx-runtime").JSX.Element | undefined;
1116
+ }) => import("react/jsx-runtime").JSX.Element;
251
1117
  renderProps: any;
1118
+ renderArgs: Record<string, unknown> | undefined;
1119
+ isRenderingPending: boolean;
1120
+ cachedDisplay: import("@jbrowse/core/util").AbstractDisplayModel | undefined;
252
1121
  } & {
253
1122
  doReload(): void;
254
- afterAttach(): void;
255
- setStatus(message: string): void;
256
- setLoading(newStopToken: string): void;
1123
+ setStatusMessage(message: string): void;
1124
+ setLoading(newStopToken: import("@jbrowse/core/util").StopToken): void;
257
1125
  setMessage(messageText: string): void;
258
1126
  setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
259
1127
  setError(error: unknown): void;
260
1128
  reload(): void;
1129
+ setCachedDisplay(display: import("@jbrowse/core/util").AbstractDisplayModel): void;
261
1130
  beforeDestroy(): void;
262
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
263
- configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1131
+ } & {
1132
+ readonly statusMessage: any;
1133
+ } & {
1134
+ afterAttach(): void;
1135
+ }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1136
+ configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
264
1137
  maxFeatureScreenDensity: {
265
1138
  type: string;
266
1139
  description: string;
@@ -287,13 +1160,17 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
287
1160
  description: string;
288
1161
  defaultValue: never[];
289
1162
  };
290
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
291
- }>> & import("mobx-state-tree/dist/internal").NonEmptyObject & import("mobx-state-tree")._NotCustomized, {
292
- type: string;
1163
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1164
+ showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1165
+ showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1166
+ }>> & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree")._NotCustomized, {
293
1167
  id: string;
294
- configuration: import("mobx-state-tree").ModelSnapshotType<Record<string, any>>;
1168
+ type: string;
1169
+ configuration: import("@jbrowse/mobx-state-tree").ModelSnapshotType<Record<string, any>>;
295
1170
  rpcDriverName: string | undefined;
296
1171
  heightPreConfig: number | undefined;
297
1172
  userBpPerPxLimit: number | undefined;
298
1173
  userByteSizeLimit: number | undefined;
299
- } & import("mobx-state-tree")._NotCustomized>;
1174
+ showLegend: boolean | undefined;
1175
+ showTooltips: boolean | undefined;
1176
+ } & import("@jbrowse/mobx-state-tree")._NotCustomized>;