@jbrowse/plugin-lollipop 2.6.1

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Files changed (88) hide show
  1. package/LICENSE +201 -0
  2. package/dist/LinearLollipopDisplay/configSchema.d.ts +26 -0
  3. package/dist/LinearLollipopDisplay/configSchema.js +13 -0
  4. package/dist/LinearLollipopDisplay/configSchema.js.map +1 -0
  5. package/dist/LinearLollipopDisplay/index.d.ts +2 -0
  6. package/dist/LinearLollipopDisplay/index.js +8 -0
  7. package/dist/LinearLollipopDisplay/index.js.map +1 -0
  8. package/dist/LinearLollipopDisplay/model.d.ts +303 -0
  9. package/dist/LinearLollipopDisplay/model.js +36 -0
  10. package/dist/LinearLollipopDisplay/model.js.map +1 -0
  11. package/dist/LollipopRenderer/Layout.d.ts +55 -0
  12. package/dist/LollipopRenderer/Layout.js +116 -0
  13. package/dist/LollipopRenderer/Layout.js.map +1 -0
  14. package/dist/LollipopRenderer/LollipopRenderer.d.ts +13 -0
  15. package/dist/LollipopRenderer/LollipopRenderer.js +52 -0
  16. package/dist/LollipopRenderer/LollipopRenderer.js.map +1 -0
  17. package/dist/LollipopRenderer/components/Lollipop.d.ts +3 -0
  18. package/dist/LollipopRenderer/components/Lollipop.js +63 -0
  19. package/dist/LollipopRenderer/components/Lollipop.js.map +1 -0
  20. package/dist/LollipopRenderer/components/LollipopRendering.d.ts +3 -0
  21. package/dist/LollipopRenderer/components/LollipopRendering.js +80 -0
  22. package/dist/LollipopRenderer/components/LollipopRendering.js.map +1 -0
  23. package/dist/LollipopRenderer/components/ScoreText.d.ts +15 -0
  24. package/dist/LollipopRenderer/components/ScoreText.js +20 -0
  25. package/dist/LollipopRenderer/components/ScoreText.js.map +1 -0
  26. package/dist/LollipopRenderer/components/Stick.d.ts +15 -0
  27. package/dist/LollipopRenderer/components/Stick.js +12 -0
  28. package/dist/LollipopRenderer/components/Stick.js.map +1 -0
  29. package/dist/LollipopRenderer/configSchema.d.ts +56 -0
  30. package/dist/LollipopRenderer/configSchema.js +59 -0
  31. package/dist/LollipopRenderer/configSchema.js.map +1 -0
  32. package/dist/LollipopRenderer/index.d.ts +3 -0
  33. package/dist/LollipopRenderer/index.js +13 -0
  34. package/dist/LollipopRenderer/index.js.map +1 -0
  35. package/dist/index.d.ts +6 -0
  36. package/dist/index.js +60 -0
  37. package/dist/index.js.map +1 -0
  38. package/esm/LinearLollipopDisplay/configSchema.d.ts +26 -0
  39. package/esm/LinearLollipopDisplay/configSchema.js +9 -0
  40. package/esm/LinearLollipopDisplay/configSchema.js.map +1 -0
  41. package/esm/LinearLollipopDisplay/index.d.ts +2 -0
  42. package/esm/LinearLollipopDisplay/index.js +3 -0
  43. package/esm/LinearLollipopDisplay/index.js.map +1 -0
  44. package/esm/LinearLollipopDisplay/model.d.ts +303 -0
  45. package/esm/LinearLollipopDisplay/model.js +32 -0
  46. package/esm/LinearLollipopDisplay/model.js.map +1 -0
  47. package/esm/LollipopRenderer/Layout.d.ts +55 -0
  48. package/esm/LollipopRenderer/Layout.js +111 -0
  49. package/esm/LollipopRenderer/Layout.js.map +1 -0
  50. package/esm/LollipopRenderer/LollipopRenderer.d.ts +13 -0
  51. package/esm/LollipopRenderer/LollipopRenderer.js +23 -0
  52. package/esm/LollipopRenderer/LollipopRenderer.js.map +1 -0
  53. package/esm/LollipopRenderer/components/Lollipop.d.ts +3 -0
  54. package/esm/LollipopRenderer/components/Lollipop.js +58 -0
  55. package/esm/LollipopRenderer/components/Lollipop.js.map +1 -0
  56. package/esm/LollipopRenderer/components/LollipopRendering.d.ts +3 -0
  57. package/esm/LollipopRenderer/components/LollipopRendering.js +75 -0
  58. package/esm/LollipopRenderer/components/LollipopRendering.js.map +1 -0
  59. package/esm/LollipopRenderer/components/ScoreText.d.ts +15 -0
  60. package/esm/LollipopRenderer/components/ScoreText.js +14 -0
  61. package/esm/LollipopRenderer/components/ScoreText.js.map +1 -0
  62. package/esm/LollipopRenderer/components/Stick.d.ts +15 -0
  63. package/esm/LollipopRenderer/components/Stick.js +7 -0
  64. package/esm/LollipopRenderer/components/Stick.js.map +1 -0
  65. package/esm/LollipopRenderer/configSchema.d.ts +56 -0
  66. package/esm/LollipopRenderer/configSchema.js +57 -0
  67. package/esm/LollipopRenderer/configSchema.js.map +1 -0
  68. package/esm/LollipopRenderer/index.d.ts +3 -0
  69. package/esm/LollipopRenderer/index.js +4 -0
  70. package/esm/LollipopRenderer/index.js.map +1 -0
  71. package/esm/index.d.ts +6 -0
  72. package/esm/index.js +31 -0
  73. package/esm/index.js.map +1 -0
  74. package/package.json +56 -0
  75. package/src/LinearLollipopDisplay/configSchema.ts +14 -0
  76. package/src/LinearLollipopDisplay/index.ts +2 -0
  77. package/src/LinearLollipopDisplay/model.ts +40 -0
  78. package/src/LollipopRenderer/Layout.ts +172 -0
  79. package/src/LollipopRenderer/LollipopRenderer.js +29 -0
  80. package/src/LollipopRenderer/components/Lollipop.tsx +113 -0
  81. package/src/LollipopRenderer/components/LollipopRendering.test.js +45 -0
  82. package/src/LollipopRenderer/components/LollipopRendering.tsx +140 -0
  83. package/src/LollipopRenderer/components/ScoreText.tsx +43 -0
  84. package/src/LollipopRenderer/components/Stick.tsx +36 -0
  85. package/src/LollipopRenderer/components/__snapshots__/LollipopRendering.test.js.snap +37 -0
  86. package/src/LollipopRenderer/configSchema.ts +63 -0
  87. package/src/LollipopRenderer/index.ts +3 -0
  88. package/src/index.ts +41 -0
package/src/index.ts ADDED
@@ -0,0 +1,41 @@
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+ import DisplayType from '@jbrowse/core/pluggableElementTypes/DisplayType'
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+ import Plugin from '@jbrowse/core/Plugin'
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+ import PluginManager from '@jbrowse/core/PluginManager'
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+ import { BaseLinearDisplayComponent } from '@jbrowse/plugin-linear-genome-view'
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+ import {
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+ configSchemaFactory as linearLollipopDisplayConfigSchemaFactory,
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+ stateModelFactory as LinearLollipopDisplayStateModelFactory,
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+ } from './LinearLollipopDisplay'
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+ import LollipopRenderer, {
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+ configSchema as lollipopRendererConfigSchema,
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+ ReactComponent as LollipopRendererReactComponent,
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+ } from './LollipopRenderer'
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+
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+ export default class extends Plugin {
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+ name = 'LollipopPlugin'
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+
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+ install(pluginManager: PluginManager) {
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+ pluginManager.addRendererType(
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+ () =>
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+ new LollipopRenderer({
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+ name: 'LollipopRenderer',
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+ ReactComponent: LollipopRendererReactComponent,
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+ configSchema: lollipopRendererConfigSchema,
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+ pluginManager,
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+ }),
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+ )
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+
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+ pluginManager.addDisplayType(() => {
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+ const configSchema =
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+ linearLollipopDisplayConfigSchemaFactory(pluginManager)
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+ return new DisplayType({
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+ name: 'LinearLollipopDisplay',
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+ configSchema,
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+ stateModel: LinearLollipopDisplayStateModelFactory(configSchema),
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+ trackType: 'LollipopTrack',
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+ viewType: 'LinearGenomeView',
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+ ReactComponent: BaseLinearDisplayComponent,
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+ })
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+ })
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+ }
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+ }