@jbrowse/plugin-linear-genome-view 4.1.3 → 4.1.4

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (42) hide show
  1. package/esm/BaseLinearDisplay/components/FloatingLabels.js +3 -4
  2. package/esm/BaseLinearDisplay/components/LoadingOverlay.d.ts +2 -1
  3. package/esm/BaseLinearDisplay/components/LoadingOverlay.js +2 -2
  4. package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.d.ts +1 -0
  5. package/esm/BaseLinearDisplay/components/NonBlockCanvasDisplayComponent.js +2 -2
  6. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +1 -0
  7. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +1 -1
  8. package/esm/BaseLinearDisplay/components/util.d.ts +8 -8
  9. package/esm/BaseLinearDisplay/components/util.js +25 -35
  10. package/esm/BaseLinearDisplay/model.d.ts +18 -8
  11. package/esm/BaseLinearDisplay/models/SvgFloatingLabels.d.ts +8 -0
  12. package/esm/BaseLinearDisplay/models/SvgFloatingLabels.js +19 -0
  13. package/esm/BaseLinearDisplay/models/configSchema.d.ts +2 -2
  14. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +2 -0
  15. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +3 -0
  16. package/esm/BaseLinearDisplay/models/util.d.ts +0 -13
  17. package/esm/BaseLinearDisplay/renderSvg.js +8 -4
  18. package/esm/BaseLinearDisplay/types.d.ts +0 -4
  19. package/esm/BasicTrack/configSchema.d.ts +8 -8
  20. package/esm/FeatureTrack/configSchema.d.ts +8 -8
  21. package/esm/LinearBareDisplay/configSchema.d.ts +3 -3
  22. package/esm/LinearBareDisplay/model.d.ts +18 -8
  23. package/esm/LinearBasicDisplay/configSchema.d.ts +3 -3
  24. package/esm/LinearBasicDisplay/model.d.ts +18 -8
  25. package/esm/LinearFeatureDisplay/configSchema.d.ts +3 -3
  26. package/esm/LinearFeatureDisplay/model.d.ts +22 -10
  27. package/esm/LinearGenomeView/components/ExportSvgDialog.js +18 -6
  28. package/esm/LinearGenomeView/components/SearchResultsTable.js +2 -7
  29. package/esm/LinearGenomeView/lazyDialogs.d.ts +23 -0
  30. package/esm/LinearGenomeView/lazyDialogs.js +5 -0
  31. package/esm/LinearGenomeView/menuItems.js +1 -5
  32. package/esm/LinearGenomeView/model.d.ts +2 -1
  33. package/esm/LinearGenomeView/model.js +64 -13
  34. package/esm/LinearGenomeView/types.d.ts +1 -0
  35. package/esm/index.d.ts +23 -12
  36. package/esm/index.js +1 -0
  37. package/esm/searchUtils.js +4 -1
  38. package/package.json +5 -5
  39. package/esm/BaseLinearDisplay/models/calculateLabelPositions.d.ts +0 -24
  40. package/esm/BaseLinearDisplay/models/calculateLabelPositions.js +0 -60
  41. package/esm/BaseLinearDisplay/models/renderSvg.d.ts +0 -3
  42. package/esm/BaseLinearDisplay/models/renderSvg.js +0 -55
package/esm/FeatureTrack/configSchema.d.ts CHANGED
@@ -1,5 +1,5 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- declare const configSchema: (pluginManager: PluginManager) => import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{}, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
2
+ declare const configSchema: (pluginManager: PluginManager) => import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  name: {
4
4
  description: string;
5
5
  type: string;
@@ -31,7 +31,7 @@ declare const configSchema: (pluginManager: PluginManager) => import("node_modul
31
31
  defaultValue: string;
32
32
  };
33
33
  adapter: import("@jbrowse/mobx-state-tree").IAnyModelType;
34
- textSearching: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
34
+ textSearching: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
35
35
  indexingAttributes: {
36
36
  type: string;
37
37
  description: string;
@@ -43,9 +43,9 @@ declare const configSchema: (pluginManager: PluginManager) => import("node_modul
43
43
  defaultValue: string[];
44
44
  };
45
45
  textSearchAdapter: import("@jbrowse/mobx-state-tree").IAnyModelType;
46
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
46
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
47
47
  displays: import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").IAnyModelType>;
48
- formatDetails: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
48
+ formatDetails: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
49
49
  feature: {
50
50
  type: string;
51
51
  description: string;
@@ -68,8 +68,8 @@ declare const configSchema: (pluginManager: PluginManager) => import("node_modul
68
68
  defaultValue: number;
69
69
  description: string;
70
70
  };
71
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
72
- formatAbout: import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaType<{
71
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
72
+ formatAbout: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
73
73
  config: {
74
74
  type: string;
75
75
  description: string;
@@ -80,6 +80,6 @@ declare const configSchema: (pluginManager: PluginManager) => import("node_modul
80
80
  type: string;
81
81
  defaultValue: boolean;
82
82
  };
83
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
84
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "trackId">>, "trackId">>;
83
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
84
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "trackId">>, "trackId">>;
85
85
  export default configSchema;
package/esm/LinearBareDisplay/configSchema.d.ts CHANGED
@@ -1,7 +1,7 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- declare function configSchemaFactory(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2
+ declare function configSchemaFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  renderer: import("@jbrowse/mobx-state-tree").IAnyModelType;
4
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
4
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
5
5
  maxFeatureScreenDensity: {
6
6
  type: string;
7
7
  description: string;
@@ -28,5 +28,5 @@ declare function configSchemaFactory(pluginManager: PluginManager): import("node
28
28
  description: string;
29
29
  defaultValue: never[];
30
30
  };
31
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
31
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
32
32
  export { configSchemaFactory };
package/esm/LinearBareDisplay/model.d.ts CHANGED
@@ -33,6 +33,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
33
33
  statusMessage?: string;
34
34
  reactElement?: React.ReactElement;
35
35
  isRenderingPending?: boolean;
36
+ displayHeight?: number;
36
37
  };
37
38
  }) => import("react/jsx-runtime").JSX.Element;
38
39
  renderProps: any;
@@ -51,10 +52,11 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
51
52
  beforeDestroy(): void;
52
53
  } & {
53
54
  readonly statusMessage: any;
55
+ readonly displayHeight: number | undefined;
54
56
  } & {
55
57
  afterAttach(): void;
56
58
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
57
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
59
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
58
60
  maxFeatureScreenDensity: {
59
61
  type: string;
60
62
  description: string;
@@ -81,7 +83,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
81
83
  description: string;
82
84
  defaultValue: never[];
83
85
  };
84
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
86
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
85
87
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
86
88
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
87
89
  } & {
@@ -375,6 +377,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
375
377
  statusMessage?: string;
376
378
  reactElement?: React.ReactElement;
377
379
  isRenderingPending?: boolean;
380
+ displayHeight?: number;
378
381
  };
379
382
  }) => import("react/jsx-runtime").JSX.Element;
380
383
  renderProps: any;
@@ -393,6 +396,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
393
396
  beforeDestroy(): void;
394
397
  } & {
395
398
  readonly statusMessage: any;
399
+ readonly displayHeight: number | undefined;
396
400
  } & {
397
401
  afterAttach(): void;
398
402
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
@@ -419,6 +423,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
419
423
  statusMessage?: string;
420
424
  reactElement?: React.ReactElement;
421
425
  isRenderingPending?: boolean;
426
+ displayHeight?: number;
422
427
  };
423
428
  }) => import("react/jsx-runtime").JSX.Element;
424
429
  renderProps: any;
@@ -437,6 +442,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
437
442
  beforeDestroy(): void;
438
443
  } & {
439
444
  readonly statusMessage: any;
445
+ readonly displayHeight: number | undefined;
440
446
  } & {
441
447
  afterAttach(): void;
442
448
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
@@ -450,7 +456,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
450
456
  [x: string]: any;
451
457
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
452
458
  } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
453
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
459
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
454
460
  maxFeatureScreenDensity: {
455
461
  type: string;
456
462
  description: string;
@@ -477,7 +483,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
477
483
  description: string;
478
484
  defaultValue: never[];
479
485
  };
480
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
486
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>>;
481
487
  showLegend: boolean | undefined;
482
488
  showTooltips: boolean | undefined;
483
489
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
@@ -767,6 +773,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
767
773
  statusMessage?: string;
768
774
  reactElement?: React.ReactElement;
769
775
  isRenderingPending?: boolean;
776
+ displayHeight?: number;
770
777
  };
771
778
  }) => import("react/jsx-runtime").JSX.Element;
772
779
  renderProps: any;
@@ -785,10 +792,11 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
785
792
  beforeDestroy(): void;
786
793
  } & {
787
794
  readonly statusMessage: any;
795
+ readonly displayHeight: number | undefined;
788
796
  } & {
789
797
  afterAttach(): void;
790
798
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
791
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
799
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
792
800
  maxFeatureScreenDensity: {
793
801
  type: string;
794
802
  description: string;
@@ -815,7 +823,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
815
823
  description: string;
816
824
  defaultValue: never[];
817
825
  };
818
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
826
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
819
827
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
820
828
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
821
829
  }, {
@@ -1121,6 +1129,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
1121
1129
  statusMessage?: string;
1122
1130
  reactElement?: React.ReactElement;
1123
1131
  isRenderingPending?: boolean;
1132
+ displayHeight?: number;
1124
1133
  };
1125
1134
  }) => import("react/jsx-runtime").JSX.Element;
1126
1135
  renderProps: any;
@@ -1139,10 +1148,11 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
1139
1148
  beforeDestroy(): void;
1140
1149
  } & {
1141
1150
  readonly statusMessage: any;
1151
+ readonly displayHeight: number | undefined;
1142
1152
  } & {
1143
1153
  afterAttach(): void;
1144
1154
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1145
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1155
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1146
1156
  maxFeatureScreenDensity: {
1147
1157
  type: string;
1148
1158
  description: string;
@@ -1169,7 +1179,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
1169
1179
  description: string;
1170
1180
  defaultValue: never[];
1171
1181
  };
1172
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1182
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1173
1183
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1174
1184
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1175
1185
  }>> & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree")._NotCustomized, {
package/esm/LinearBasicDisplay/configSchema.d.ts CHANGED
@@ -1,7 +1,7 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- declare function configSchemaFactory(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2
+ declare function configSchemaFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  renderer: import("@jbrowse/mobx-state-tree").IAnyModelType;
4
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
4
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
5
5
  maxFeatureScreenDensity: {
6
6
  type: string;
7
7
  description: string;
@@ -28,5 +28,5 @@ declare function configSchemaFactory(pluginManager: PluginManager): import("node
28
28
  description: string;
29
29
  defaultValue: never[];
30
30
  };
31
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
31
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
32
32
  export default configSchemaFactory;
package/esm/LinearBasicDisplay/model.d.ts CHANGED
@@ -35,6 +35,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
35
35
  statusMessage?: string;
36
36
  reactElement?: React.ReactElement;
37
37
  isRenderingPending?: boolean;
38
+ displayHeight?: number;
38
39
  };
39
40
  }) => import("react/jsx-runtime").JSX.Element;
40
41
  renderProps: any;
@@ -53,10 +54,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
53
54
  beforeDestroy(): void;
54
55
  } & {
55
56
  readonly statusMessage: any;
57
+ readonly displayHeight: number | undefined;
56
58
  } & {
57
59
  afterAttach(): void;
58
60
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
59
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
61
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
60
62
  maxFeatureScreenDensity: {
61
63
  type: string;
62
64
  description: string;
@@ -83,7 +85,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
83
85
  description: string;
84
86
  defaultValue: never[];
85
87
  };
86
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
88
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
87
89
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
88
90
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
89
91
  } & {
@@ -388,6 +390,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
388
390
  statusMessage?: string;
389
391
  reactElement?: React.ReactElement;
390
392
  isRenderingPending?: boolean;
393
+ displayHeight?: number;
391
394
  };
392
395
  }) => import("react/jsx-runtime").JSX.Element;
393
396
  renderProps: any;
@@ -406,6 +409,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
406
409
  beforeDestroy(): void;
407
410
  } & {
408
411
  readonly statusMessage: any;
412
+ readonly displayHeight: number | undefined;
409
413
  } & {
410
414
  afterAttach(): void;
411
415
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
@@ -432,6 +436,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
432
436
  statusMessage?: string;
433
437
  reactElement?: React.ReactElement;
434
438
  isRenderingPending?: boolean;
439
+ displayHeight?: number;
435
440
  };
436
441
  }) => import("react/jsx-runtime").JSX.Element;
437
442
  renderProps: any;
@@ -450,6 +455,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
450
455
  beforeDestroy(): void;
451
456
  } & {
452
457
  readonly statusMessage: any;
458
+ readonly displayHeight: number | undefined;
453
459
  } & {
454
460
  afterAttach(): void;
455
461
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
@@ -463,7 +469,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
463
469
  [x: string]: any;
464
470
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
465
471
  } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
466
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
472
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
467
473
  maxFeatureScreenDensity: {
468
474
  type: string;
469
475
  description: string;
@@ -490,7 +496,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
490
496
  description: string;
491
497
  defaultValue: never[];
492
498
  };
493
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
499
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>>;
494
500
  showLegend: boolean | undefined;
495
501
  showTooltips: boolean | undefined;
496
502
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
@@ -780,6 +786,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
780
786
  statusMessage?: string;
781
787
  reactElement?: React.ReactElement;
782
788
  isRenderingPending?: boolean;
789
+ displayHeight?: number;
783
790
  };
784
791
  }) => import("react/jsx-runtime").JSX.Element;
785
792
  renderProps: any;
@@ -798,10 +805,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
798
805
  beforeDestroy(): void;
799
806
  } & {
800
807
  readonly statusMessage: any;
808
+ readonly displayHeight: number | undefined;
801
809
  } & {
802
810
  afterAttach(): void;
803
811
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
804
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
812
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
805
813
  maxFeatureScreenDensity: {
806
814
  type: string;
807
815
  description: string;
@@ -828,7 +836,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
828
836
  description: string;
829
837
  defaultValue: never[];
830
838
  };
831
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
839
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
832
840
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
833
841
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
834
842
  }, {
@@ -1309,6 +1317,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1309
1317
  statusMessage?: string;
1310
1318
  reactElement?: React.ReactElement;
1311
1319
  isRenderingPending?: boolean;
1320
+ displayHeight?: number;
1312
1321
  };
1313
1322
  }) => import("react/jsx-runtime").JSX.Element;
1314
1323
  renderProps: any;
@@ -1327,10 +1336,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1327
1336
  beforeDestroy(): void;
1328
1337
  } & {
1329
1338
  readonly statusMessage: any;
1339
+ readonly displayHeight: number | undefined;
1330
1340
  } & {
1331
1341
  afterAttach(): void;
1332
1342
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1333
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1343
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1334
1344
  maxFeatureScreenDensity: {
1335
1345
  type: string;
1336
1346
  description: string;
@@ -1357,7 +1367,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1357
1367
  description: string;
1358
1368
  defaultValue: never[];
1359
1369
  };
1360
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1370
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1361
1371
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1362
1372
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1363
1373
  } & {
package/esm/LinearFeatureDisplay/configSchema.d.ts CHANGED
@@ -1,7 +1,7 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- declare function configSchemaFactory(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
2
+ declare function configSchemaFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  renderer: import("@jbrowse/mobx-state-tree").IAnyModelType;
4
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
4
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
5
5
  maxFeatureScreenDensity: {
6
6
  type: string;
7
7
  description: string;
@@ -28,5 +28,5 @@ declare function configSchemaFactory(pluginManager: PluginManager): import("node
28
28
  description: string;
29
29
  defaultValue: never[];
30
30
  };
31
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
31
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>;
32
32
  export default configSchemaFactory;
package/esm/LinearFeatureDisplay/model.d.ts CHANGED
@@ -37,6 +37,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
37
37
  statusMessage?: string;
38
38
  reactElement?: React.ReactElement;
39
39
  isRenderingPending?: boolean;
40
+ displayHeight?: number;
40
41
  };
41
42
  }) => import("react/jsx-runtime").JSX.Element;
42
43
  renderProps: any;
@@ -55,10 +56,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
55
56
  beforeDestroy(): void;
56
57
  } & {
57
58
  readonly statusMessage: any;
59
+ readonly displayHeight: number | undefined;
58
60
  } & {
59
61
  afterAttach(): void;
60
62
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
61
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
63
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
62
64
  maxFeatureScreenDensity: {
63
65
  type: string;
64
66
  description: string;
@@ -85,7 +87,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
85
87
  description: string;
86
88
  defaultValue: never[];
87
89
  };
88
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
90
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
89
91
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
90
92
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
91
93
  } & {
@@ -384,6 +386,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
384
386
  statusMessage?: string;
385
387
  reactElement?: React.ReactElement;
386
388
  isRenderingPending?: boolean;
389
+ displayHeight?: number;
387
390
  };
388
391
  }) => import("react/jsx-runtime").JSX.Element;
389
392
  renderProps: any;
@@ -402,6 +405,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
402
405
  beforeDestroy(): void;
403
406
  } & {
404
407
  readonly statusMessage: any;
408
+ readonly displayHeight: number | undefined;
405
409
  } & {
406
410
  afterAttach(): void;
407
411
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMapType<import("@jbrowse/mobx-state-tree").IModelType<{
@@ -428,6 +432,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
428
432
  statusMessage?: string;
429
433
  reactElement?: React.ReactElement;
430
434
  isRenderingPending?: boolean;
435
+ displayHeight?: number;
431
436
  };
432
437
  }) => import("react/jsx-runtime").JSX.Element;
433
438
  renderProps: any;
@@ -446,6 +451,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
446
451
  beforeDestroy(): void;
447
452
  } & {
448
453
  readonly statusMessage: any;
454
+ readonly displayHeight: number | undefined;
449
455
  } & {
450
456
  afterAttach(): void;
451
457
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
@@ -459,7 +465,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
459
465
  [x: string]: any;
460
466
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & any & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
461
467
  } & import("@jbrowse/mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
462
- } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
468
+ } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
463
469
  maxFeatureScreenDensity: {
464
470
  type: string;
465
471
  description: string;
@@ -486,7 +492,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
486
492
  description: string;
487
493
  defaultValue: never[];
488
494
  };
489
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>>;
495
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>>;
490
496
  showLegend: boolean | undefined;
491
497
  showTooltips: boolean | undefined;
492
498
  } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
@@ -776,6 +782,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
776
782
  statusMessage?: string;
777
783
  reactElement?: React.ReactElement;
778
784
  isRenderingPending?: boolean;
785
+ displayHeight?: number;
779
786
  };
780
787
  }) => import("react/jsx-runtime").JSX.Element;
781
788
  renderProps: any;
@@ -794,10 +801,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
794
801
  beforeDestroy(): void;
795
802
  } & {
796
803
  readonly statusMessage: any;
804
+ readonly displayHeight: number | undefined;
797
805
  } & {
798
806
  afterAttach(): void;
799
807
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
800
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
808
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
801
809
  maxFeatureScreenDensity: {
802
810
  type: string;
803
811
  description: string;
@@ -824,7 +832,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
824
832
  description: string;
825
833
  defaultValue: never[];
826
834
  };
827
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
835
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
828
836
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
829
837
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
830
838
  }, {
@@ -1280,6 +1288,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1280
1288
  statusMessage?: string;
1281
1289
  reactElement?: React.ReactElement;
1282
1290
  isRenderingPending?: boolean;
1291
+ displayHeight?: number;
1283
1292
  };
1284
1293
  }) => import("react/jsx-runtime").JSX.Element;
1285
1294
  renderProps: any;
@@ -1298,10 +1307,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1298
1307
  beforeDestroy(): void;
1299
1308
  } & {
1300
1309
  readonly statusMessage: any;
1310
+ readonly displayHeight: number | undefined;
1301
1311
  } & {
1302
1312
  afterAttach(): void;
1303
1313
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1304
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1314
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1305
1315
  maxFeatureScreenDensity: {
1306
1316
  type: string;
1307
1317
  description: string;
@@ -1328,7 +1338,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1328
1338
  description: string;
1329
1339
  defaultValue: never[];
1330
1340
  };
1331
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1341
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1332
1342
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1333
1343
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1334
1344
  }>> & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree").ModelSnapshotType<{
@@ -1365,6 +1375,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1365
1375
  statusMessage?: string;
1366
1376
  reactElement?: React.ReactElement;
1367
1377
  isRenderingPending?: boolean;
1378
+ displayHeight?: number;
1368
1379
  };
1369
1380
  }) => import("react/jsx-runtime").JSX.Element;
1370
1381
  renderProps: any;
@@ -1383,10 +1394,11 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1383
1394
  beforeDestroy(): void;
1384
1395
  } & {
1385
1396
  readonly statusMessage: any;
1397
+ readonly displayHeight: number | undefined;
1386
1398
  } & {
1387
1399
  afterAttach(): void;
1388
1400
  }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
1389
- configuration: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
1401
+ configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1390
1402
  maxFeatureScreenDensity: {
1391
1403
  type: string;
1392
1404
  description: string;
@@ -1413,7 +1425,7 @@ declare function stateModelFactory(configSchema: AnyConfigurationSchemaType): im
1413
1425
  description: string;
1414
1426
  defaultValue: never[];
1415
1427
  };
1416
- }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>;
1428
+ }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
1417
1429
  showLegend: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1418
1430
  showTooltips: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>>;
1419
1431
  } & {
package/esm/LinearGenomeView/components/ExportSvgDialog.js CHANGED
@@ -2,9 +2,9 @@ import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
2
2
  import { useState } from 'react';
3
3
  import { Dialog, ErrorMessage } from '@jbrowse/core/ui';
4
4
  import { getSession, useLocalStorage } from '@jbrowse/core/util';
5
- import { Button, Checkbox, CircularProgress, DialogActions, DialogContent, FormControlLabel, MenuItem, TextField, Typography, } from '@mui/material';
6
- function LoadingMessage() {
7
- return (_jsxs("div", { children: [_jsx(CircularProgress, { size: 20, style: { marginRight: 20 } }), _jsx(Typography, { display: "inline", children: "Creating SVG" })] }));
5
+ import { Button, Checkbox, CircularProgress, DialogActions, DialogContent, FormControlLabel, MenuItem, TextField, ToggleButton, ToggleButtonGroup, Typography, } from '@mui/material';
6
+ function LoadingMessage({ format }) {
7
+ return (_jsxs("div", { children: [_jsx(CircularProgress, { size: 20, style: { marginRight: 20 } }), _jsxs(Typography, { display: "inline", children: ["Creating ", format.toUpperCase()] })] }));
8
8
  }
9
9
  function useSvgLocal(key, val) {
10
10
  return useLocalStorage(`svg-${key}`, val);
@@ -19,12 +19,23 @@ export default function ExportSvgDialog({ model, handleClose, }) {
19
19
  const [showGridlines, setShowGridlines] = useSvgLocal('gridlines', false);
20
20
  const [loading, setLoading] = useState(false);
21
21
  const [error, setError] = useState();
22
+ const [format, setFormat] = useSvgLocal('format', 'svg');
22
23
  const [filename, setFilename] = useSvgLocal('file', 'jbrowse.svg');
23
24
  const [trackLabels, setTrackLabels] = useSvgLocal('tracklabels', 'offset');
24
25
  const [themeName, setThemeName] = useSvgLocal('theme', session.themeName || 'default');
25
- return (_jsxs(Dialog, { open: true, onClose: handleClose, title: "Export SVG", children: [_jsxs(DialogContent, { children: [error ? (_jsx(ErrorMessage, { error: error })) : loading ? (_jsx(LoadingMessage, {})) : null, _jsx(TextField2, { helperText: "filename", value: filename, onChange: event => {
26
- setFilename(event.target.value);
27
- } }), _jsxs(TextField2, { select: true, label: "Track label positioning", variant: "outlined", style: { width: 150 }, value: trackLabels, onChange: event => {
26
+ return (_jsxs(Dialog, { open: true, onClose: handleClose, title: "Export image", children: [_jsxs(DialogContent, { children: [error ? (_jsx(ErrorMessage, { error: error })) : loading ? (_jsx(LoadingMessage, { format: format })) : null, _jsxs("div", { style: { display: 'flex', alignItems: 'center', gap: 8 }, children: [_jsx(TextField, { helperText: "filename", value: filename, onChange: event => {
27
+ setFilename(event.target.value);
28
+ } }), _jsxs(ToggleButtonGroup, { value: format, exclusive: true, onChange: (_event, value) => {
29
+ if (value) {
30
+ setFormat(value);
31
+ if (filename.endsWith('.svg') && value === 'png') {
32
+ setFilename(filename.replace(/\.svg$/, '.png'));
33
+ }
34
+ else if (filename.endsWith('.png') && value === 'svg') {
35
+ setFilename(filename.replace(/\.png$/, '.svg'));
36
+ }
37
+ }
38
+ }, size: "small", children: [_jsx(ToggleButton, { value: "svg", children: "SVG" }), _jsx(ToggleButton, { value: "png", children: "PNG" })] })] }), _jsxs(TextField2, { select: true, label: "Track label positioning", variant: "outlined", style: { width: 150 }, value: trackLabels, onChange: event => {
28
39
  setTrackLabels(event.target.value);
29
40
  }, children: [_jsx(MenuItem, { value: "offset", children: "Offset" }), _jsx(MenuItem, { value: "overlay", children: "Overlay" }), _jsx(MenuItem, { value: "left", children: "Left" }), _jsx(MenuItem, { value: "none", children: "None" })] }), session.allThemes ? (_jsx(TextField2, { select: true, label: "Theme", variant: "outlined", value: themeName, onChange: event => {
30
41
  setThemeName(event.target.value);
@@ -40,6 +51,7 @@ export default function ExportSvgDialog({ model, handleClose, }) {
40
51
  try {
41
52
  await model.exportSvg({
42
53
  rasterizeLayers,
54
+ format,
43
55
  filename,
44
56
  trackLabels,
45
57
  themeName,
package/esm/LinearGenomeView/components/SearchResultsTable.js CHANGED
@@ -1,6 +1,5 @@
1
1
  import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
2
2
  import { assembleLocString, getEnv, getSession, parseLocString, } from '@jbrowse/core/util';
3
- import { getRoot, resolveIdentifier } from '@jbrowse/mobx-state-tree';
4
3
  import { Button, Paper, Table, TableBody, TableCell, TableContainer, TableHead, TableRow, } from '@mui/material';
5
4
  import { navToOption } from "../../searchUtils.js";
6
5
  export default function SearchResultsTable({ searchResults, assemblyName: optAssemblyName, model, handleClose, }) {
@@ -16,12 +15,7 @@ export default function SearchResultsTable({ searchResults, assemblyName: optAss
16
15
  throw new Error(`assembly ${assemblyName} regions not loaded`);
17
16
  }
18
17
  function getTrackName(trackId) {
19
- if (trackId) {
20
- const schema = pluginManager.pluggableConfigSchemaType('track');
21
- const configuration = resolveIdentifier(schema, getRoot(model), trackId);
22
- return configuration?.name?.value || '';
23
- }
24
- return '';
18
+ return trackId !== undefined ? session.getTracksById()[trackId]?.name : '';
25
19
  }
26
20
  async function handleClick(result) {
27
21
  if (result.hasLocation()) {
@@ -38,6 +32,7 @@ export default function SearchResultsTable({ searchResults, assemblyName: optAss
38
32
  model.setDisplayedRegions([newRegion]);
39
33
  model.showAllRegions();
40
34
  }
35
+ await pluginManager.evaluateAsyncExtensionPoint('LinearGenomeView-searchResultSelected', undefined, { session, result, model, assemblyName });
41
36
  }
42
37
  }
43
38
  return (_jsx(TableContainer, { component: Paper, children: _jsxs(Table, { children: [_jsx(TableHead, { children: _jsxs(TableRow, { children: [_jsx(TableCell, { children: "Name" }), _jsx(TableCell, { align: "right", children: "Location" }), _jsx(TableCell, { align: "right", children: "Track" }), _jsx(TableCell, { align: "right" })] }) }), _jsx(TableBody, { children: searchResults.map(result => {