@jbrowse/plugin-linear-genome-view 2.6.1 → 2.6.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (370) hide show
  1. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -1
  2. package/dist/BaseLinearDisplay/components/Block.js +0 -1
  3. package/dist/BaseLinearDisplay/components/BlockMsg.js +0 -1
  4. package/dist/BaseLinearDisplay/components/LinearBlocks.js +0 -1
  5. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -1
  6. package/dist/BaseLinearDisplay/components/TooLargeMessage.js +0 -1
  7. package/dist/BaseLinearDisplay/components/Tooltip.js +0 -1
  8. package/dist/BaseLinearDisplay/index.js +0 -1
  9. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +0 -1
  10. package/dist/BaseLinearDisplay/models/FeatureDensityMixin.js +0 -1
  11. package/dist/BaseLinearDisplay/models/TrackHeightMixin.js +0 -1
  12. package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.js +0 -1
  13. package/dist/BaseLinearDisplay/models/configSchema.js +0 -1
  14. package/dist/BaseLinearDisplay/models/renderSvg.js +0 -1
  15. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +0 -1
  16. package/dist/BaseLinearDisplay/models/util.js +0 -1
  17. package/dist/BasicTrack/configSchema.js +0 -1
  18. package/dist/BasicTrack/index.js +0 -1
  19. package/dist/FeatureTrack/configSchema.js +0 -1
  20. package/dist/FeatureTrack/index.js +0 -1
  21. package/dist/LaunchLinearGenomeView/index.js +0 -1
  22. package/dist/LinearBareDisplay/configSchema.js +0 -1
  23. package/dist/LinearBareDisplay/index.js +0 -1
  24. package/dist/LinearBareDisplay/model.js +0 -1
  25. package/dist/LinearBasicDisplay/components/SetMaxHeight.js +0 -1
  26. package/dist/LinearBasicDisplay/configSchema.js +0 -1
  27. package/dist/LinearBasicDisplay/index.js +0 -1
  28. package/dist/LinearBasicDisplay/model.js +0 -1
  29. package/dist/LinearGenomeView/components/CenterLine.js +0 -1
  30. package/dist/LinearGenomeView/components/Cytobands.js +0 -1
  31. package/dist/LinearGenomeView/components/ExportSvgDialog.js +0 -1
  32. package/dist/LinearGenomeView/components/GetSequenceDialog.js +0 -1
  33. package/dist/LinearGenomeView/components/Gridlines.js +0 -1
  34. package/dist/LinearGenomeView/components/Header.js +0 -1
  35. package/dist/LinearGenomeView/components/ImportForm.js +0 -1
  36. package/dist/LinearGenomeView/components/LinearGenomeView.js +0 -1
  37. package/dist/LinearGenomeView/components/MiniControls.js +0 -1
  38. package/dist/LinearGenomeView/components/OverviewRubberband.js +0 -1
  39. package/dist/LinearGenomeView/components/OverviewScalebar.js +0 -1
  40. package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +0 -1
  41. package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +0 -1
  42. package/dist/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js +0 -1
  43. package/dist/LinearGenomeView/components/RefNameAutocomplete/index.js +0 -1
  44. package/dist/LinearGenomeView/components/RefNameAutocomplete/util.js +0 -1
  45. package/dist/LinearGenomeView/components/Rubberband.js +0 -1
  46. package/dist/LinearGenomeView/components/RubberbandSpan.js +0 -1
  47. package/dist/LinearGenomeView/components/Scalebar.js +0 -1
  48. package/dist/LinearGenomeView/components/SearchBox.js +0 -1
  49. package/dist/LinearGenomeView/components/SearchResultsDialog.js +0 -1
  50. package/dist/LinearGenomeView/components/SearchResultsTable.js +0 -1
  51. package/dist/LinearGenomeView/components/SequenceSearchDialog.js +0 -1
  52. package/dist/LinearGenomeView/components/TrackContainer.js +0 -1
  53. package/dist/LinearGenomeView/components/TrackLabel.js +1 -2
  54. package/dist/LinearGenomeView/components/TrackLabelContainer.js +0 -1
  55. package/dist/LinearGenomeView/components/TrackRenderingContainer.js +3 -2
  56. package/dist/LinearGenomeView/components/TracksContainer.js +0 -1
  57. package/dist/LinearGenomeView/components/VerticalGuide.js +0 -1
  58. package/dist/LinearGenomeView/components/ZoomControls.js +0 -1
  59. package/dist/LinearGenomeView/components/hooks.js +0 -1
  60. package/dist/LinearGenomeView/components/util.js +0 -1
  61. package/dist/LinearGenomeView/index.js +0 -1
  62. package/dist/LinearGenomeView/model.js +0 -1
  63. package/dist/LinearGenomeView/svgcomponents/SVGBackground.js +2 -2
  64. package/dist/LinearGenomeView/svgcomponents/SVGHeader.js +6 -5
  65. package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +0 -1
  66. package/dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +0 -1
  67. package/dist/LinearGenomeView/svgcomponents/SVGRuler.js +6 -4
  68. package/dist/LinearGenomeView/svgcomponents/SVGScalebar.js +8 -5
  69. package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.js +0 -1
  70. package/dist/LinearGenomeView/svgcomponents/SVGTracks.js +0 -1
  71. package/dist/LinearGenomeView/util.js +0 -1
  72. package/dist/index.js +0 -1
  73. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +0 -1
  74. package/esm/BaseLinearDisplay/components/Block.js +0 -1
  75. package/esm/BaseLinearDisplay/components/BlockMsg.js +0 -1
  76. package/esm/BaseLinearDisplay/components/LinearBlocks.js +0 -1
  77. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +0 -1
  78. package/esm/BaseLinearDisplay/components/TooLargeMessage.js +0 -1
  79. package/esm/BaseLinearDisplay/components/Tooltip.js +0 -1
  80. package/esm/BaseLinearDisplay/index.js +0 -1
  81. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js +0 -1
  82. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.js +0 -1
  83. package/esm/BaseLinearDisplay/models/TrackHeightMixin.js +0 -1
  84. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.js +0 -1
  85. package/esm/BaseLinearDisplay/models/configSchema.js +0 -1
  86. package/esm/BaseLinearDisplay/models/renderSvg.js +0 -1
  87. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +0 -1
  88. package/esm/BaseLinearDisplay/models/util.js +0 -1
  89. package/esm/BasicTrack/configSchema.js +0 -1
  90. package/esm/BasicTrack/index.js +0 -1
  91. package/esm/FeatureTrack/configSchema.js +0 -1
  92. package/esm/FeatureTrack/index.js +0 -1
  93. package/esm/LaunchLinearGenomeView/index.js +0 -1
  94. package/esm/LinearBareDisplay/configSchema.js +0 -1
  95. package/esm/LinearBareDisplay/index.js +0 -1
  96. package/esm/LinearBareDisplay/model.js +0 -1
  97. package/esm/LinearBasicDisplay/components/SetMaxHeight.js +0 -1
  98. package/esm/LinearBasicDisplay/configSchema.js +0 -1
  99. package/esm/LinearBasicDisplay/index.js +0 -1
  100. package/esm/LinearBasicDisplay/model.js +0 -1
  101. package/esm/LinearGenomeView/components/CenterLine.js +0 -1
  102. package/esm/LinearGenomeView/components/Cytobands.js +0 -1
  103. package/esm/LinearGenomeView/components/ExportSvgDialog.js +0 -1
  104. package/esm/LinearGenomeView/components/GetSequenceDialog.js +0 -1
  105. package/esm/LinearGenomeView/components/Gridlines.js +0 -1
  106. package/esm/LinearGenomeView/components/Header.js +0 -1
  107. package/esm/LinearGenomeView/components/ImportForm.js +0 -1
  108. package/esm/LinearGenomeView/components/LinearGenomeView.js +0 -1
  109. package/esm/LinearGenomeView/components/MiniControls.js +0 -1
  110. package/esm/LinearGenomeView/components/OverviewRubberband.js +0 -1
  111. package/esm/LinearGenomeView/components/OverviewScalebar.js +0 -1
  112. package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +0 -1
  113. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +0 -1
  114. package/esm/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js +0 -1
  115. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.js +0 -1
  116. package/esm/LinearGenomeView/components/RefNameAutocomplete/util.js +0 -1
  117. package/esm/LinearGenomeView/components/Rubberband.js +0 -1
  118. package/esm/LinearGenomeView/components/RubberbandSpan.js +0 -1
  119. package/esm/LinearGenomeView/components/Scalebar.js +0 -1
  120. package/esm/LinearGenomeView/components/SearchBox.js +0 -1
  121. package/esm/LinearGenomeView/components/SearchResultsDialog.js +0 -1
  122. package/esm/LinearGenomeView/components/SearchResultsTable.js +0 -1
  123. package/esm/LinearGenomeView/components/SequenceSearchDialog.js +0 -1
  124. package/esm/LinearGenomeView/components/TrackContainer.js +0 -1
  125. package/esm/LinearGenomeView/components/TrackLabel.js +1 -2
  126. package/esm/LinearGenomeView/components/TrackLabelContainer.js +0 -1
  127. package/esm/LinearGenomeView/components/TrackRenderingContainer.js +4 -3
  128. package/esm/LinearGenomeView/components/TracksContainer.js +0 -1
  129. package/esm/LinearGenomeView/components/VerticalGuide.js +0 -1
  130. package/esm/LinearGenomeView/components/ZoomControls.js +0 -1
  131. package/esm/LinearGenomeView/components/hooks.js +0 -1
  132. package/esm/LinearGenomeView/components/util.js +0 -1
  133. package/esm/LinearGenomeView/index.js +0 -1
  134. package/esm/LinearGenomeView/model.js +0 -1
  135. package/esm/LinearGenomeView/svgcomponents/SVGBackground.js +2 -2
  136. package/esm/LinearGenomeView/svgcomponents/SVGHeader.js +6 -5
  137. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +0 -1
  138. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +0 -1
  139. package/esm/LinearGenomeView/svgcomponents/SVGRuler.js +6 -4
  140. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.js +8 -5
  141. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.js +0 -1
  142. package/esm/LinearGenomeView/svgcomponents/SVGTracks.js +0 -1
  143. package/esm/LinearGenomeView/util.js +0 -1
  144. package/esm/index.js +0 -1
  145. package/package.json +4 -4
  146. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js.map +0 -1
  147. package/dist/BaseLinearDisplay/components/Block.js.map +0 -1
  148. package/dist/BaseLinearDisplay/components/BlockMsg.js.map +0 -1
  149. package/dist/BaseLinearDisplay/components/LinearBlocks.js.map +0 -1
  150. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +0 -1
  151. package/dist/BaseLinearDisplay/components/TooLargeMessage.js.map +0 -1
  152. package/dist/BaseLinearDisplay/components/Tooltip.js.map +0 -1
  153. package/dist/BaseLinearDisplay/index.js.map +0 -1
  154. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +0 -1
  155. package/dist/BaseLinearDisplay/models/FeatureDensityMixin.js.map +0 -1
  156. package/dist/BaseLinearDisplay/models/TrackHeightMixin.js.map +0 -1
  157. package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.js.map +0 -1
  158. package/dist/BaseLinearDisplay/models/configSchema.js.map +0 -1
  159. package/dist/BaseLinearDisplay/models/renderSvg.js.map +0 -1
  160. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +0 -1
  161. package/dist/BaseLinearDisplay/models/util.js.map +0 -1
  162. package/dist/BasicTrack/configSchema.js.map +0 -1
  163. package/dist/BasicTrack/index.js.map +0 -1
  164. package/dist/FeatureTrack/configSchema.js.map +0 -1
  165. package/dist/FeatureTrack/index.js.map +0 -1
  166. package/dist/LaunchLinearGenomeView/index.js.map +0 -1
  167. package/dist/LinearBareDisplay/configSchema.js.map +0 -1
  168. package/dist/LinearBareDisplay/index.js.map +0 -1
  169. package/dist/LinearBareDisplay/model.js.map +0 -1
  170. package/dist/LinearBasicDisplay/components/SetMaxHeight.js.map +0 -1
  171. package/dist/LinearBasicDisplay/configSchema.js.map +0 -1
  172. package/dist/LinearBasicDisplay/index.js.map +0 -1
  173. package/dist/LinearBasicDisplay/model.js.map +0 -1
  174. package/dist/LinearGenomeView/components/CenterLine.js.map +0 -1
  175. package/dist/LinearGenomeView/components/Cytobands.js.map +0 -1
  176. package/dist/LinearGenomeView/components/ExportSvgDialog.js.map +0 -1
  177. package/dist/LinearGenomeView/components/GetSequenceDialog.js.map +0 -1
  178. package/dist/LinearGenomeView/components/Gridlines.js.map +0 -1
  179. package/dist/LinearGenomeView/components/Header.js.map +0 -1
  180. package/dist/LinearGenomeView/components/ImportForm.js.map +0 -1
  181. package/dist/LinearGenomeView/components/LinearGenomeView.js.map +0 -1
  182. package/dist/LinearGenomeView/components/MiniControls.js.map +0 -1
  183. package/dist/LinearGenomeView/components/OverviewRubberband.js.map +0 -1
  184. package/dist/LinearGenomeView/components/OverviewScalebar.js.map +0 -1
  185. package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js.map +0 -1
  186. package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js.map +0 -1
  187. package/dist/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js.map +0 -1
  188. package/dist/LinearGenomeView/components/RefNameAutocomplete/index.js.map +0 -1
  189. package/dist/LinearGenomeView/components/RefNameAutocomplete/util.js.map +0 -1
  190. package/dist/LinearGenomeView/components/Rubberband.js.map +0 -1
  191. package/dist/LinearGenomeView/components/RubberbandSpan.js.map +0 -1
  192. package/dist/LinearGenomeView/components/Scalebar.js.map +0 -1
  193. package/dist/LinearGenomeView/components/SearchBox.js.map +0 -1
  194. package/dist/LinearGenomeView/components/SearchResultsDialog.js.map +0 -1
  195. package/dist/LinearGenomeView/components/SearchResultsTable.js.map +0 -1
  196. package/dist/LinearGenomeView/components/SequenceSearchDialog.js.map +0 -1
  197. package/dist/LinearGenomeView/components/TrackContainer.js.map +0 -1
  198. package/dist/LinearGenomeView/components/TrackLabel.js.map +0 -1
  199. package/dist/LinearGenomeView/components/TrackLabelContainer.js.map +0 -1
  200. package/dist/LinearGenomeView/components/TrackRenderingContainer.js.map +0 -1
  201. package/dist/LinearGenomeView/components/TracksContainer.js.map +0 -1
  202. package/dist/LinearGenomeView/components/VerticalGuide.js.map +0 -1
  203. package/dist/LinearGenomeView/components/ZoomControls.js.map +0 -1
  204. package/dist/LinearGenomeView/components/hooks.js.map +0 -1
  205. package/dist/LinearGenomeView/components/util.js.map +0 -1
  206. package/dist/LinearGenomeView/index.js.map +0 -1
  207. package/dist/LinearGenomeView/model.js.map +0 -1
  208. package/dist/LinearGenomeView/svgcomponents/SVGBackground.js.map +0 -1
  209. package/dist/LinearGenomeView/svgcomponents/SVGHeader.js.map +0 -1
  210. package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js.map +0 -1
  211. package/dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.js.map +0 -1
  212. package/dist/LinearGenomeView/svgcomponents/SVGRuler.js.map +0 -1
  213. package/dist/LinearGenomeView/svgcomponents/SVGScalebar.js.map +0 -1
  214. package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.js.map +0 -1
  215. package/dist/LinearGenomeView/svgcomponents/SVGTracks.js.map +0 -1
  216. package/dist/LinearGenomeView/util.js.map +0 -1
  217. package/dist/index.js.map +0 -1
  218. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js.map +0 -1
  219. package/esm/BaseLinearDisplay/components/Block.js.map +0 -1
  220. package/esm/BaseLinearDisplay/components/BlockMsg.js.map +0 -1
  221. package/esm/BaseLinearDisplay/components/LinearBlocks.js.map +0 -1
  222. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +0 -1
  223. package/esm/BaseLinearDisplay/components/TooLargeMessage.js.map +0 -1
  224. package/esm/BaseLinearDisplay/components/Tooltip.js.map +0 -1
  225. package/esm/BaseLinearDisplay/index.js.map +0 -1
  226. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +0 -1
  227. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.js.map +0 -1
  228. package/esm/BaseLinearDisplay/models/TrackHeightMixin.js.map +0 -1
  229. package/esm/BaseLinearDisplay/models/autorunFeatureDensityStats.js.map +0 -1
  230. package/esm/BaseLinearDisplay/models/configSchema.js.map +0 -1
  231. package/esm/BaseLinearDisplay/models/renderSvg.js.map +0 -1
  232. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +0 -1
  233. package/esm/BaseLinearDisplay/models/util.js.map +0 -1
  234. package/esm/BasicTrack/configSchema.js.map +0 -1
  235. package/esm/BasicTrack/index.js.map +0 -1
  236. package/esm/FeatureTrack/configSchema.js.map +0 -1
  237. package/esm/FeatureTrack/index.js.map +0 -1
  238. package/esm/LaunchLinearGenomeView/index.js.map +0 -1
  239. package/esm/LinearBareDisplay/configSchema.js.map +0 -1
  240. package/esm/LinearBareDisplay/index.js.map +0 -1
  241. package/esm/LinearBareDisplay/model.js.map +0 -1
  242. package/esm/LinearBasicDisplay/components/SetMaxHeight.js.map +0 -1
  243. package/esm/LinearBasicDisplay/configSchema.js.map +0 -1
  244. package/esm/LinearBasicDisplay/index.js.map +0 -1
  245. package/esm/LinearBasicDisplay/model.js.map +0 -1
  246. package/esm/LinearGenomeView/components/CenterLine.js.map +0 -1
  247. package/esm/LinearGenomeView/components/Cytobands.js.map +0 -1
  248. package/esm/LinearGenomeView/components/ExportSvgDialog.js.map +0 -1
  249. package/esm/LinearGenomeView/components/GetSequenceDialog.js.map +0 -1
  250. package/esm/LinearGenomeView/components/Gridlines.js.map +0 -1
  251. package/esm/LinearGenomeView/components/Header.js.map +0 -1
  252. package/esm/LinearGenomeView/components/ImportForm.js.map +0 -1
  253. package/esm/LinearGenomeView/components/LinearGenomeView.js.map +0 -1
  254. package/esm/LinearGenomeView/components/MiniControls.js.map +0 -1
  255. package/esm/LinearGenomeView/components/OverviewRubberband.js.map +0 -1
  256. package/esm/LinearGenomeView/components/OverviewScalebar.js.map +0 -1
  257. package/esm/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js.map +0 -1
  258. package/esm/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js.map +0 -1
  259. package/esm/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js.map +0 -1
  260. package/esm/LinearGenomeView/components/RefNameAutocomplete/index.js.map +0 -1
  261. package/esm/LinearGenomeView/components/RefNameAutocomplete/util.js.map +0 -1
  262. package/esm/LinearGenomeView/components/Rubberband.js.map +0 -1
  263. package/esm/LinearGenomeView/components/RubberbandSpan.js.map +0 -1
  264. package/esm/LinearGenomeView/components/Scalebar.js.map +0 -1
  265. package/esm/LinearGenomeView/components/SearchBox.js.map +0 -1
  266. package/esm/LinearGenomeView/components/SearchResultsDialog.js.map +0 -1
  267. package/esm/LinearGenomeView/components/SearchResultsTable.js.map +0 -1
  268. package/esm/LinearGenomeView/components/SequenceSearchDialog.js.map +0 -1
  269. package/esm/LinearGenomeView/components/TrackContainer.js.map +0 -1
  270. package/esm/LinearGenomeView/components/TrackLabel.js.map +0 -1
  271. package/esm/LinearGenomeView/components/TrackLabelContainer.js.map +0 -1
  272. package/esm/LinearGenomeView/components/TrackRenderingContainer.js.map +0 -1
  273. package/esm/LinearGenomeView/components/TracksContainer.js.map +0 -1
  274. package/esm/LinearGenomeView/components/VerticalGuide.js.map +0 -1
  275. package/esm/LinearGenomeView/components/ZoomControls.js.map +0 -1
  276. package/esm/LinearGenomeView/components/hooks.js.map +0 -1
  277. package/esm/LinearGenomeView/components/util.js.map +0 -1
  278. package/esm/LinearGenomeView/index.js.map +0 -1
  279. package/esm/LinearGenomeView/model.js.map +0 -1
  280. package/esm/LinearGenomeView/svgcomponents/SVGBackground.js.map +0 -1
  281. package/esm/LinearGenomeView/svgcomponents/SVGHeader.js.map +0 -1
  282. package/esm/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js.map +0 -1
  283. package/esm/LinearGenomeView/svgcomponents/SVGRegionSeparators.js.map +0 -1
  284. package/esm/LinearGenomeView/svgcomponents/SVGRuler.js.map +0 -1
  285. package/esm/LinearGenomeView/svgcomponents/SVGScalebar.js.map +0 -1
  286. package/esm/LinearGenomeView/svgcomponents/SVGTrackLabel.js.map +0 -1
  287. package/esm/LinearGenomeView/svgcomponents/SVGTracks.js.map +0 -1
  288. package/esm/LinearGenomeView/util.js.map +0 -1
  289. package/esm/index.js.map +0 -1
  290. package/src/BaseLinearDisplay/components/BaseLinearDisplay.tsx +0 -117
  291. package/src/BaseLinearDisplay/components/Block.tsx +0 -77
  292. package/src/BaseLinearDisplay/components/BlockMsg.tsx +0 -42
  293. package/src/BaseLinearDisplay/components/LinearBlocks.tsx +0 -119
  294. package/src/BaseLinearDisplay/components/ServerSideRenderedBlockContent.tsx +0 -69
  295. package/src/BaseLinearDisplay/components/TooLargeMessage.tsx +0 -36
  296. package/src/BaseLinearDisplay/components/Tooltip.tsx +0 -107
  297. package/src/BaseLinearDisplay/index.ts +0 -16
  298. package/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx +0 -407
  299. package/src/BaseLinearDisplay/models/FeatureDensityMixin.tsx +0 -213
  300. package/src/BaseLinearDisplay/models/TrackHeightMixin.tsx +0 -59
  301. package/src/BaseLinearDisplay/models/autorunFeatureDensityStats.ts +0 -46
  302. package/src/BaseLinearDisplay/models/configSchema.ts +0 -60
  303. package/src/BaseLinearDisplay/models/renderSvg.tsx +0 -101
  304. package/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts +0 -320
  305. package/src/BaseLinearDisplay/models/util.ts +0 -67
  306. package/src/BasicTrack/configSchema.ts +0 -24
  307. package/src/BasicTrack/index.ts +0 -18
  308. package/src/FeatureTrack/configSchema.ts +0 -28
  309. package/src/FeatureTrack/index.ts +0 -18
  310. package/src/LaunchLinearGenomeView/index.ts +0 -66
  311. package/src/LinearBareDisplay/configSchema.ts +0 -28
  312. package/src/LinearBareDisplay/index.test.js +0 -34
  313. package/src/LinearBareDisplay/index.ts +0 -25
  314. package/src/LinearBareDisplay/model.ts +0 -54
  315. package/src/LinearBasicDisplay/components/SetMaxHeight.tsx +0 -73
  316. package/src/LinearBasicDisplay/configSchema.ts +0 -28
  317. package/src/LinearBasicDisplay/index.ts +0 -25
  318. package/src/LinearBasicDisplay/model.ts +0 -215
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package/esm/LinearGenomeView/components/TrackLabel.js.map DELETED
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package/esm/LinearGenomeView/components/TrackLabelContainer.js.map DELETED
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package/esm/LinearGenomeView/components/TrackRenderingContainer.js.map DELETED
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package/esm/LinearGenomeView/svgcomponents/SVGBackground.js.map DELETED
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package/esm/LinearGenomeView/svgcomponents/SVGHeader.js.map DELETED
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package/src/BaseLinearDisplay/components/BaseLinearDisplay.tsx DELETED
@@ -1,117 +0,0 @@
1
- import React, { useState, useRef } from 'react'
2
- import { observer } from 'mobx-react'
3
- import { useTheme } from '@mui/material'
4
- import { makeStyles } from 'tss-react/mui'
5
- import { getConf } from '@jbrowse/core/configuration'
6
- import { Menu } from '@jbrowse/core/ui'
7
-
8
- // locals
9
-
10
- import LinearBlocks from './LinearBlocks'
11
- import { BaseLinearDisplayModel } from '../models/BaseLinearDisplayModel'
12
-
13
- const useStyles = makeStyles()({
14
- display: {
15
- position: 'relative',
16
- whiteSpace: 'nowrap',
17
- textAlign: 'left',
18
- width: '100%',
19
- minHeight: '100%',
20
- },
21
- })
22
-
23
- type Coord = [number, number]
24
- const BaseLinearDisplay = observer(function (props: {
25
- model: BaseLinearDisplayModel
26
- children?: React.ReactNode
27
- }) {
28
- const { classes } = useStyles()
29
- const theme = useTheme()
30
- const ref = useRef<HTMLDivElement>(null)
31
- const [clientRect, setClientRect] = useState<DOMRect>()
32
- const [offsetMouseCoord, setOffsetMouseCoord] = useState<Coord>([0, 0])
33
- const [clientMouseCoord, setClientMouseCoord] = useState<Coord>([0, 0])
34
- const [contextCoord, setContextCoord] = useState<Coord>()
35
- const { model, children } = props
36
- const {
37
- TooltipComponent,
38
- DisplayMessageComponent,
39
- contextMenuItems,
40
- height,
41
- setContextMenuFeature,
42
- } = model
43
-
44
- return (
45
- <div
46
- ref={ref}
47
- data-testid={`display-${getConf(model, 'displayId')}`}
48
- className={classes.display}
49
- onContextMenu={event => {
50
- event.preventDefault()
51
- if (contextCoord) {
52
- // There's already a context menu open, so close it
53
- setContextCoord(undefined)
54
- } else if (ref.current) {
55
- setContextCoord([event.clientX, event.clientY])
56
- }
57
- }}
58
- onMouseMove={event => {
59
- if (!ref.current) {
60
- return
61
- }
62
- const rect = ref.current.getBoundingClientRect()
63
- const { left, top } = rect
64
- setOffsetMouseCoord([event.clientX - left, event.clientY - top])
65
- setClientMouseCoord([event.clientX, event.clientY])
66
- setClientRect(rect)
67
- }}
68
- >
69
- {DisplayMessageComponent ? (
70
- <DisplayMessageComponent model={model} />
71
- ) : (
72
- <LinearBlocks {...props} />
73
- )}
74
- {children}
75
-
76
- <TooltipComponent
77
- model={model}
78
- height={height}
79
- offsetMouseCoord={offsetMouseCoord}
80
- clientMouseCoord={clientMouseCoord}
81
- clientRect={clientRect}
82
- mouseCoord={offsetMouseCoord}
83
- />
84
-
85
- <Menu
86
- open={Boolean(contextCoord) && Boolean(contextMenuItems().length)}
87
- onMenuItemClick={(_, callback) => {
88
- callback()
89
- setContextCoord(undefined)
90
- }}
91
- onClose={() => {
92
- setContextCoord(undefined)
93
- setContextMenuFeature(undefined)
94
- }}
95
- TransitionProps={{
96
- onExit: () => {
97
- setContextCoord(undefined)
98
- setContextMenuFeature(undefined)
99
- },
100
- }}
101
- anchorReference="anchorPosition"
102
- anchorPosition={
103
- contextCoord
104
- ? { top: contextCoord[1], left: contextCoord[0] }
105
- : undefined
106
- }
107
- style={{ zIndex: theme.zIndex.tooltip }}
108
- menuItems={contextMenuItems()}
109
- />
110
- </div>
111
- )
112
- })
113
-
114
- export default BaseLinearDisplay
115
-
116
- export { default as Tooltip } from './Tooltip'
117
- export { default as BlockMsg } from './BlockMsg'
package/src/BaseLinearDisplay/components/Block.tsx DELETED
@@ -1,77 +0,0 @@
1
- import React from 'react'
2
- import { BaseBlock } from '@jbrowse/core/util/blockTypes'
3
- import { makeStyles } from 'tss-react/mui'
4
- import { observer } from 'mobx-react'
5
-
6
- const useStyles = makeStyles()(theme => ({
7
- contentBlock: {
8
- position: 'relative',
9
- minHeight: '100%',
10
- boxSizing: 'border-box',
11
- whiteSpace: 'nowrap',
12
- overflow: 'hidden',
13
- },
14
- elidedBlock: {
15
- minHeight: '100%',
16
- boxSizing: 'border-box',
17
- backgroundColor: '#999',
18
- backgroundImage:
19
- 'repeating-linear-gradient(90deg, transparent, transparent 1px, rgba(255,255,255,.5) 1px, rgba(255,255,255,.5) 3px)',
20
- },
21
- interRegionPaddingBlock: {
22
- minHeight: '100%',
23
- backgroundColor: theme.palette.text.disabled,
24
- },
25
- boundaryPaddingBlock: {
26
- minHeight: '100%',
27
- backgroundColor: theme.palette.action.disabledBackground,
28
- },
29
- }))
30
-
31
- const ContentBlock = observer(function ({
32
- block,
33
- children,
34
- }: {
35
- block: BaseBlock
36
- children: React.ReactNode
37
- }) {
38
- const { classes } = useStyles()
39
- const { widthPx } = block
40
- return (
41
- <div style={{ width: widthPx }} className={classes.contentBlock}>
42
- {children}
43
- </div>
44
- )
45
- })
46
-
47
- function ElidedBlock({ width }: { width: number }) {
48
- const { classes } = useStyles()
49
- return <div className={classes.elidedBlock} style={{ width }} />
50
- }
51
-
52
- function InterRegionPaddingBlock({
53
- boundary,
54
- width,
55
- style = {},
56
- }: {
57
- boundary: boolean
58
- width: number
59
- style?: React.CSSProperties
60
- }) {
61
- const { classes } = useStyles()
62
- return (
63
- <div
64
- style={{
65
- ...style,
66
- width,
67
- }}
68
- className={
69
- boundary
70
- ? classes.boundaryPaddingBlock
71
- : classes.interRegionPaddingBlock
72
- }
73
- />
74
- )
75
- }
76
-
77
- export { ContentBlock, ElidedBlock, InterRegionPaddingBlock }
package/src/BaseLinearDisplay/components/BlockMsg.tsx DELETED
@@ -1,42 +0,0 @@
1
- import React from 'react'
2
- import { Tooltip, Button, Alert, AlertColor } from '@mui/material'
3
- import { makeStyles } from 'tss-react/mui'
4
-
5
- const useStyles = makeStyles()({
6
- ellipses: {
7
- textOverflow: 'ellipsis',
8
- overflow: 'hidden',
9
- },
10
- })
11
-
12
- export default function BlockMsg({
13
- message,
14
- severity,
15
- buttonText,
16
- icon,
17
- action,
18
- }: {
19
- message: string
20
- severity?: AlertColor
21
- buttonText?: string
22
- icon?: React.ReactNode
23
- action?: () => void
24
- }) {
25
- const { classes } = useStyles()
26
- const button = action ? (
27
- <Button data-testid="reload_button" onClick={action} startIcon={icon}>
28
- {buttonText}
29
- </Button>
30
- ) : null
31
- return (
32
- <Alert
33
- severity={severity}
34
- action={button}
35
- classes={{ message: classes.ellipses }}
36
- >
37
- <Tooltip title={message}>
38
- <div>{message}</div>
39
- </Tooltip>
40
- </Alert>
41
- )
42
- }
package/src/BaseLinearDisplay/components/LinearBlocks.tsx DELETED
@@ -1,119 +0,0 @@
1
- import React from 'react'
2
- import { makeStyles } from 'tss-react/mui'
3
- import { getContainingView } from '@jbrowse/core/util'
4
- import { observer } from 'mobx-react'
5
- import {
6
- ContentBlock,
7
- ElidedBlock,
8
- InterRegionPaddingBlock,
9
- } from '@jbrowse/core/util/blockTypes'
10
- import { BaseLinearDisplayModel } from '../models/BaseLinearDisplayModel'
11
-
12
- import {
13
- ContentBlock as ContentBlockComponent,
14
- ElidedBlock as ElidedBlockComponent,
15
- InterRegionPaddingBlock as InterRegionPaddingBlockComponent,
16
- } from './Block'
17
- import { LinearGenomeViewModel } from '../../LinearGenomeView'
18
-
19
- type LGV = LinearGenomeViewModel
20
-
21
- const useStyles = makeStyles()({
22
- linearBlocks: {
23
- whiteSpace: 'nowrap',
24
- textAlign: 'left',
25
- position: 'absolute',
26
- minHeight: '100%',
27
- display: 'flex',
28
- },
29
- heightOverflowed: {
30
- position: 'absolute',
31
- color: 'rgb(77,77,77)',
32
- borderBottom: '2px solid rgb(77,77,77)',
33
- textShadow: 'white 0px 0px 1px',
34
- whiteSpace: 'nowrap',
35
- width: '100%',
36
- fontWeight: 'bold',
37
- textAlign: 'center',
38
- zIndex: 2000,
39
- boxSizing: 'border-box',
40
- },
41
- })
42
-
43
- const RenderedBlocks = observer(function ({
44
- model,
45
- }: {
46
- model: BaseLinearDisplayModel
47
- }) {
48
- const { classes } = useStyles()
49
- const { blockDefinitions, blockState } = model
50
- return (
51
- <>
52
- {blockDefinitions.map(block => {
53
- if (block instanceof ContentBlock) {
54
- const state = blockState.get(block.key)
55
-
56
- return (
57
- <ContentBlockComponent
58
- block={block}
59
- key={`${model.id}-${block.key}`}
60
- >
61
- {state && state.ReactComponent ? (
62
- <state.ReactComponent model={state} />
63
- ) : null}
64
- {state && state.maxHeightReached ? (
65
- <div
66
- className={classes.heightOverflowed}
67
- style={{
68
- top: state.layout.getTotalHeight() - 16,
69
- pointerEvents: 'none',
70
- height: 16,
71
- }}
72
- >
73
- Max height reached
74
- </div>
75
- ) : null}
76
- </ContentBlockComponent>
77
- )
78
- }
79
- if (block instanceof ElidedBlock) {
80
- return (
81
- <ElidedBlockComponent
82
- key={`${model.id}-${block.key}`}
83
- width={block.widthPx}
84
- />
85
- )
86
- }
87
- if (block instanceof InterRegionPaddingBlock) {
88
- return (
89
- <InterRegionPaddingBlockComponent
90
- key={block.key}
91
- width={block.widthPx}
92
- style={{ background: 'none' }}
93
- boundary={block.variant === 'boundary'}
94
- />
95
- )
96
- }
97
- throw new Error(`invalid block type ${typeof block}`)
98
- })}
99
- </>
100
- )
101
- })
102
- function LinearBlocks({ model }: { model: BaseLinearDisplayModel }) {
103
- const { classes } = useStyles()
104
- const { blockDefinitions } = model
105
- const viewModel = getContainingView(model) as LGV
106
- return (
107
- <div
108
- className={classes.linearBlocks}
109
- style={{
110
- left: blockDefinitions.offsetPx - viewModel.offsetPx,
111
- }}
112
- >
113
- <RenderedBlocks model={model} />
114
- </div>
115
- )
116
- }
117
-
118
- export { RenderedBlocks, useStyles }
119
- export default observer(LinearBlocks)