@jbrowse/plugin-linear-genome-view 2.10.0 → 2.10.2

package/esm/LinearGenomeView/model.js

@@ -418,26 +418,26 @@ export function stateModelFactory(pluginManager) {
         /**
          * #action
          */
-        toggleHeader() {
-            self.hideHeader = !self.hideHeader;
+        setHideHeader(b) {
+            self.hideHeader = b;
         },
         /**
          * #action
          */
-        toggleHeaderOverview() {
-            self.hideHeaderOverview = !self.hideHeaderOverview;
+        setHideHeaderOverview(b) {
+            self.hideHeaderOverview = b;
         },
         /**
          * #action
          */
-        toggleNoTracksActive() {
-            self.hideNoTracksActive = !self.hideNoTracksActive;
+        setHideNoTracksActive(b) {
+            self.hideNoTracksActive = b;
         },
         /**
          * #action
          */
-        toggleShowGridlines() {
-            self.showGridlines = !self.showGridlines;
+        setShowGridlines(b) {
+            self.showGridlines = b;
         },
         /**
          * #action
@@ -613,8 +613,8 @@ export function stateModelFactory(pluginManager) {
         /**
          * #action
          */
-        toggleCenterLine() {
-            self.showCenterLine = !self.showCenterLine;
+        setShowCenterLine(b) {
+            self.showCenterLine = b;
         },
         /**
          * #action
@@ -891,32 +891,32 @@ export function stateModelFactory(pluginManager) {
                             label: 'Show center line',
                             type: 'checkbox',
                             checked: self.showCenterLine,
-                            onClick: self.toggleCenterLine,
+                            onClick: () => self.setShowCenterLine(!self.showCenterLine),
                         },
                         {
                             label: 'Show header',
                             type: 'checkbox',
                             checked: !self.hideHeader,
-                            onClick: self.toggleHeader,
+                            onClick: () => self.setHideHeader(!self.hideHeader),
                         },
                         {
                             label: 'Show header overview',
                             type: 'checkbox',
                             checked: !self.hideHeaderOverview,
-                            onClick: self.toggleHeaderOverview,
+                            onClick: () => self.setHideHeaderOverview(!self.hideHeaderOverview),
                             disabled: self.hideHeader,
                         },
                         {
                             label: 'Show no tracks active button',
                             type: 'checkbox',
                             checked: !self.hideNoTracksActive,
-                            onClick: self.toggleNoTracksActive,
+                            onClick: () => self.setHideNoTracksActive(!self.hideNoTracksActive),
                         },
                         {
                             label: 'Show guidelines',
                             type: 'checkbox',
                             checked: self.showGridlines,
-                            onClick: self.toggleShowGridlines,
+                            onClick: () => self.setShowGridlines(!self.showGridlines),
                         },
                         ...(canShowCytobands
                             ? [

package/esm/LinearGenomeView/svgcomponents/SVGHeader.js

@@ -5,9 +5,9 @@ import { useTheme } from '@mui/material';
 // locals
 import { HEADER_OVERVIEW_HEIGHT } from '..';
 import Cytobands from '../components/Cytobands';
-import { Polygon } from '../components/OverviewScalebar';
 import SVGRuler from './SVGRuler';
 import SVGScalebar from './SVGScalebar';
+import OverviewScalebarPolygon from '../components/OverviewScalebarPolygon';
 export default function SVGHeader({ model, fontSize, cytobandHeight, rulerHeight, }) {
     const { width, assemblyNames, showCytobands, displayedRegions } = model;
     const { assemblyManager } = getSession(model);
@@ -44,7 +44,7 @@ export default function SVGHeader({ model, fontSize, cytobandHeight, rulerHeight
             React.createElement(Cytobands, { overview: overview, assembly: assembly, block: block }),
             React.createElement("rect", { stroke: "red", fill: "rgb(255,0,0,0.1)", width: Math.max(lastOverviewPx - firstOverviewPx, 0.5), height: HEADER_OVERVIEW_HEIGHT - 1, x: firstOverviewPx, y: 0.5 }),
             React.createElement("g", { transform: `translate(0,${HEADER_OVERVIEW_HEIGHT})` },
-                React.createElement(Polygon, { overview: overview, model: model, useOffset: false })))) : null,
+                React.createElement(OverviewScalebarPolygon, { overview: overview, model: model, useOffset: false })))) : null,
         React.createElement("g", { transform: `translate(0 ${fontSize + y})` },
             React.createElement(SVGScalebar, { model: model, fontSize: fontSize })),
         React.createElement("g", { transform: `translate(0 ${rulerHeight + y})` },

package/esm/index.d.ts

@@ -964,10 +964,10 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 setShowCytobands(flag: boolean): void;
                 setWidth(newWidth: number): void;
                 setError(error: unknown): void;
-                toggleHeader(): void;
-                toggleHeaderOverview(): void;
-                toggleNoTracksActive(): void;
-                toggleShowGridlines(): void;
+                setHideHeader(b: boolean): void;
+                setHideHeaderOverview(b: boolean): void;
+                setHideNoTracksActive(b: boolean): void;
+                setShowGridlines(b: boolean): void;
                 scrollTo(offsetPx: number): number;
                 zoomTo(bpPerPx: number, offset?: number, centerAtOffset?: boolean): number;
                 setOffsets(left?: import("./LinearGenomeView").BpOffset | undefined, right?: import("./LinearGenomeView").BpOffset | undefined): void;
@@ -981,7 +981,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 closeView(): void;
                 toggleTrack(trackId: string): boolean;
                 setTrackLabels(setting: "offset" | "hidden" | "overlapping"): void;
-                toggleCenterLine(): void;
+                setShowCenterLine(b: boolean): void;
                 setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
                 activateTrackSelector(): import("@jbrowse/core/util").Widget;
                 getSelectedRegions(leftOffset?: import("./LinearGenomeView").BpOffset | undefined, rightOffset?: import("./LinearGenomeView").BpOffset | undefined): {
@@ -1283,10 +1283,10 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 setShowCytobands(flag: boolean): void;
                 setWidth(newWidth: number): void;
                 setError(error: unknown): void;
-                toggleHeader(): void;
-                toggleHeaderOverview(): void;
-                toggleNoTracksActive(): void;
-                toggleShowGridlines(): void;
+                setHideHeader(b: boolean): void;
+                setHideHeaderOverview(b: boolean): void;
+                setHideNoTracksActive(b: boolean): void;
+                setShowGridlines(b: boolean): void;
                 scrollTo(offsetPx: number): number;
                 zoomTo(bpPerPx: number, offset?: number, centerAtOffset?: boolean): number;
                 setOffsets(left?: import("./LinearGenomeView").BpOffset | undefined, right?: import("./LinearGenomeView").BpOffset | undefined): void;
@@ -1300,7 +1300,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 closeView(): void;
                 toggleTrack(trackId: string): boolean;
                 setTrackLabels(setting: "offset" | "hidden" | "overlapping"): void;
-                toggleCenterLine(): void;
+                setShowCenterLine(b: boolean): void;
                 setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
                 activateTrackSelector(): import("@jbrowse/core/util").Widget;
                 getSelectedRegions(leftOffset?: import("./LinearGenomeView").BpOffset | undefined, rightOffset?: import("./LinearGenomeView").BpOffset | undefined): {
@@ -1612,10 +1612,10 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 setShowCytobands(flag: boolean): void;
                 setWidth(newWidth: number): void;
                 setError(error: unknown): void;
-                toggleHeader(): void;
-                toggleHeaderOverview(): void;
-                toggleNoTracksActive(): void;
-                toggleShowGridlines(): void;
+                setHideHeader(b: boolean): void;
+                setHideHeaderOverview(b: boolean): void;
+                setHideNoTracksActive(b: boolean): void;
+                setShowGridlines(b: boolean): void;
                 scrollTo(offsetPx: number): number;
                 zoomTo(bpPerPx: number, offset?: number, centerAtOffset?: boolean): number;
                 setOffsets(left?: import("./LinearGenomeView").BpOffset | undefined, right?: import("./LinearGenomeView").BpOffset | undefined): void;
@@ -1629,7 +1629,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 closeView(): void;
                 toggleTrack(trackId: string): boolean;
                 setTrackLabels(setting: "offset" | "hidden" | "overlapping"): void;
-                toggleCenterLine(): void;
+                setShowCenterLine(b: boolean): void;
                 setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
                 activateTrackSelector(): import("@jbrowse/core/util").Widget;
                 getSelectedRegions(leftOffset?: import("./LinearGenomeView").BpOffset | undefined, rightOffset?: import("./LinearGenomeView").BpOffset | undefined): {
@@ -1931,10 +1931,10 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 setShowCytobands(flag: boolean): void;
                 setWidth(newWidth: number): void;
                 setError(error: unknown): void;
-                toggleHeader(): void;
-                toggleHeaderOverview(): void;
-                toggleNoTracksActive(): void;
-                toggleShowGridlines(): void;
+                setHideHeader(b: boolean): void;
+                setHideHeaderOverview(b: boolean): void;
+                setHideNoTracksActive(b: boolean): void;
+                setShowGridlines(b: boolean): void;
                 scrollTo(offsetPx: number): number;
                 zoomTo(bpPerPx: number, offset?: number, centerAtOffset?: boolean): number;
                 setOffsets(left?: import("./LinearGenomeView").BpOffset | undefined, right?: import("./LinearGenomeView").BpOffset | undefined): void;
@@ -1948,7 +1948,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 closeView(): void;
                 toggleTrack(trackId: string): boolean;
                 setTrackLabels(setting: "offset" | "hidden" | "overlapping"): void;
-                toggleCenterLine(): void;
+                setShowCenterLine(b: boolean): void;
                 setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
                 activateTrackSelector(): import("@jbrowse/core/util").Widget;
                 getSelectedRegions(leftOffset?: import("./LinearGenomeView").BpOffset | undefined, rightOffset?: import("./LinearGenomeView").BpOffset | undefined): {
@@ -2260,10 +2260,10 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 setShowCytobands(flag: boolean): void;
                 setWidth(newWidth: number): void;
                 setError(error: unknown): void;
-                toggleHeader(): void;
-                toggleHeaderOverview(): void;
-                toggleNoTracksActive(): void;
-                toggleShowGridlines(): void;
+                setHideHeader(b: boolean): void;
+                setHideHeaderOverview(b: boolean): void;
+                setHideNoTracksActive(b: boolean): void;
+                setShowGridlines(b: boolean): void;
                 scrollTo(offsetPx: number): number;
                 zoomTo(bpPerPx: number, offset?: number, centerAtOffset?: boolean): number;
                 setOffsets(left?: import("./LinearGenomeView").BpOffset | undefined, right?: import("./LinearGenomeView").BpOffset | undefined): void;
@@ -2277,7 +2277,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 closeView(): void;
                 toggleTrack(trackId: string): boolean;
                 setTrackLabels(setting: "offset" | "hidden" | "overlapping"): void;
-                toggleCenterLine(): void;
+                setShowCenterLine(b: boolean): void;
                 setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
                 activateTrackSelector(): import("@jbrowse/core/util").Widget;
                 getSelectedRegions(leftOffset?: import("./LinearGenomeView").BpOffset | undefined, rightOffset?: import("./LinearGenomeView").BpOffset | undefined): {
@@ -2579,10 +2579,10 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 setShowCytobands(flag: boolean): void;
                 setWidth(newWidth: number): void;
                 setError(error: unknown): void;
-                toggleHeader(): void;
-                toggleHeaderOverview(): void;
-                toggleNoTracksActive(): void;
-                toggleShowGridlines(): void;
+                setHideHeader(b: boolean): void;
+                setHideHeaderOverview(b: boolean): void;
+                setHideNoTracksActive(b: boolean): void;
+                setShowGridlines(b: boolean): void;
                 scrollTo(offsetPx: number): number;
                 zoomTo(bpPerPx: number, offset?: number, centerAtOffset?: boolean): number;
                 setOffsets(left?: import("./LinearGenomeView").BpOffset | undefined, right?: import("./LinearGenomeView").BpOffset | undefined): void;
@@ -2596,7 +2596,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
                 closeView(): void;
                 toggleTrack(trackId: string): boolean;
                 setTrackLabels(setting: "offset" | "hidden" | "overlapping"): void;
-                toggleCenterLine(): void;
+                setShowCenterLine(b: boolean): void;
                 setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
                 activateTrackSelector(): import("@jbrowse/core/util").Widget;
                 getSelectedRegions(leftOffset?: import("./LinearGenomeView").BpOffset | undefined, rightOffset?: import("./LinearGenomeView").BpOffset | undefined): {

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-linear-genome-view",
-  "version": "2.10.0",
+  "version": "2.10.2",
   "description": "JBrowse 2 linear genome view",
   "keywords": [
     "jbrowse",
@@ -63,5 +63,5 @@
     "access": "public"
   },
   "module": "esm/index.js",
-  "gitHead": "223d8bfb68fd1bacaf22852639ad5920f1b7f43b"
+  "gitHead": "7ca3b7db337ebd88853e2d96cdab940ed550c4fb"
 }