@jbrowse/plugin-legacy-jbrowse 2.2.2 → 2.3.1

package/dist/GuessNCList/index.d.ts

@@ -0,0 +1,3 @@
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/dist/GuessNCList/index.js

@@ -0,0 +1,20 @@
+"use strict";
+Object.defineProperty(exports, "__esModule", { value: true });
+const tracks_1 = require("@jbrowse/core/util/tracks");
+exports.default = (pluginManager) => {
+    pluginManager.addToExtensionPoint('Core-guessAdapterForLocation', (adapterGuesser) => {
+        return (file, index, adapterHint) => {
+            const regexGuess = /trackData.jsonz?$/i;
+            const adapterName = 'NCListAdapter';
+            const fileName = (0, tracks_1.getFileName)(file);
+            if (regexGuess.test(fileName) || adapterHint === adapterName) {
+                return {
+                    type: adapterName,
+                    rootUrlTemplate: file,
+                };
+            }
+            return adapterGuesser(file, index, adapterHint);
+        };
+    });
+};
+//# sourceMappingURL=index.js.map

package/dist/GuessNCList/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/GuessNCList/index.ts"],"names":[],"mappings":";;AACA,sDAAuE;AAGvE,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,mBAAmB,CAC/B,8BAA8B,EAC9B,CAAC,cAA8B,EAAE,EAAE;QACjC,OAAO,CACL,IAAkB,EAClB,KAAoB,EACpB,WAAoB,EACpB,EAAE;YACF,MAAM,UAAU,GAAG,oBAAoB,CAAA;YACvC,MAAM,WAAW,GAAG,eAAe,CAAA;YACnC,MAAM,QAAQ,GAAG,IAAA,oBAAW,EAAC,IAAI,CAAC,CAAA;YAClC,IAAI,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,IAAI,WAAW,KAAK,WAAW,EAAE;gBAC5D,OAAO;oBACL,IAAI,EAAE,WAAW;oBACjB,eAAe,EAAE,IAAI;iBACtB,CAAA;aACF;YACD,OAAO,cAAc,CAAC,IAAI,EAAE,KAAK,EAAE,WAAW,CAAC,CAAA;QACjD,CAAC,CAAA;IACH,CAAC,CACF,CAAA;AACH,CAAC,CAAA"}

package/dist/JBrowse1Connection/index.d.ts

@@ -1,2 +1,3 @@
-export { default as modelFactory } from './model';
-export { default as configSchema } from './configSchema';
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/dist/JBrowse1Connection/index.js

@@ -3,9 +3,18 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.configSchema = exports.modelFactory = void 0;
-var model_1 = require("./model");
-Object.defineProperty(exports, "modelFactory", { enumerable: true, get: function () { return __importDefault(model_1).default; } });
-var configSchema_1 = require("./configSchema");
-Object.defineProperty(exports, "configSchema", { enumerable: true, get: function () { return __importDefault(configSchema_1).default; } });
+const ConnectionType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/ConnectionType"));
+// locals
+const model_1 = __importDefault(require("./model"));
+const configSchema_1 = __importDefault(require("./configSchema"));
+exports.default = (pluginManager) => {
+    pluginManager.addConnectionType(() => new ConnectionType_1.default({
+        name: 'JBrowse1Connection',
+        configSchema: configSchema_1.default,
+        stateModel: (0, model_1.default)(pluginManager),
+        displayName: 'JBrowse 1 Data',
+        description: 'A JBrowse 1 data directory',
+        url: '//jbrowse.org/',
+    }));
+};
 //# sourceMappingURL=index.js.map

package/dist/JBrowse1Connection/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1Connection/index.ts"],"names":[],"mappings":";;;;;;AAAA,iCAAiD;AAAxC,sHAAA,OAAO,OAAgB;AAChC,+CAAwD;AAA/C,6HAAA,OAAO,OAAgB"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1Connection/index.ts"],"names":[],"mappings":";;;;;AACA,wGAA+E;AAE/E,SAAS;AACT,oDAAkC;AAClC,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,iBAAiB,CAC7B,GAAG,EAAE,CACH,IAAI,wBAAc,CAAC;QACjB,IAAI,EAAE,oBAAoB;QAC1B,YAAY,EAAZ,sBAAY;QACZ,UAAU,EAAE,IAAA,eAAY,EAAC,aAAa,CAAC;QACvC,WAAW,EAAE,gBAAgB;QAC7B,WAAW,EAAE,4BAA4B;QACzC,GAAG,EAAE,gBAAgB;KACtB,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/dist/JBrowse1TextSearchAdapter/index.d.ts

@@ -1,2 +1,3 @@
-export { default as AdapterClass } from './JBrowse1TextSearchAdapter';
-export { default as configSchema } from './configSchema';
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/dist/JBrowse1TextSearchAdapter/index.js

@@ -3,9 +3,16 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.configSchema = exports.AdapterClass = void 0;
-var JBrowse1TextSearchAdapter_1 = require("./JBrowse1TextSearchAdapter");
-Object.defineProperty(exports, "AdapterClass", { enumerable: true, get: function () { return __importDefault(JBrowse1TextSearchAdapter_1).default; } });
-var configSchema_1 = require("./configSchema");
-Object.defineProperty(exports, "configSchema", { enumerable: true, get: function () { return __importDefault(configSchema_1).default; } });
+const TextSearchAdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/TextSearchAdapterType"));
+// locals
+const JBrowse1TextSearchAdapter_1 = __importDefault(require("./JBrowse1TextSearchAdapter"));
+const configSchema_1 = __importDefault(require("./configSchema"));
+exports.default = (pluginManager) => {
+    pluginManager.addTextSearchAdapterType(() => new TextSearchAdapterType_1.default({
+        name: 'JBrowse1TextSearchAdapter',
+        configSchema: configSchema_1.default,
+        AdapterClass: JBrowse1TextSearchAdapter_1.default,
+        description: 'A JBrowse 1 text search adapter',
+    }));
+};
 //# sourceMappingURL=index.js.map

package/dist/JBrowse1TextSearchAdapter/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1TextSearchAdapter/index.ts"],"names":[],"mappings":";;;;;;AAAA,yEAAqE;AAA5D,0IAAA,OAAO,OAAgB;AAChC,+CAAwD;AAA/C,6HAAA,OAAO,OAAgB"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1TextSearchAdapter/index.ts"],"names":[],"mappings":";;;;;AACA,sHAA6F;AAE7F,SAAS;AACT,4FAAsD;AACtD,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,wBAAwB,CACpC,GAAG,EAAE,CACH,IAAI,+BAAqB,CAAC;QACxB,IAAI,EAAE,2BAA2B;QACjC,YAAY,EAAZ,sBAAY;QACZ,YAAY,EAAZ,mCAAY;QACZ,WAAW,EAAE,iCAAiC;KAC/C,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/dist/NCListAdapter/index.d.ts

@@ -1 +1,3 @@
-export { default as configSchema } from './configSchema';
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/dist/NCListAdapter/index.js

@@ -1,9 +1,39 @@
 "use strict";
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
+    }
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
+});
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.configSchema = void 0;
-var configSchema_1 = require("./configSchema");
-Object.defineProperty(exports, "configSchema", { enumerable: true, get: function () { return __importDefault(configSchema_1).default; } });
+const pluggableElementTypes_1 = require("@jbrowse/core/pluggableElementTypes");
+const configSchema_1 = __importDefault(require("./configSchema"));
+exports.default = (pluginManager) => {
+    pluginManager.addAdapterType(() => new pluggableElementTypes_1.AdapterType({
+        name: 'NCListAdapter',
+        displayName: 'NCList adapter',
+        configSchema: configSchema_1.default,
+        getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./NCListAdapter'))).then(r => r.default),
+    }));
+};
 //# sourceMappingURL=index.js.map

package/dist/NCListAdapter/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/NCListAdapter/index.ts"],"names":[],"mappings":";;;;;;AAAA,+CAAwD;AAA/C,6HAAA,OAAO,OAAgB"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/NCListAdapter/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,+EAAiE;AAGjE,kEAAyC;AAEzC,kBAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,mCAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,WAAW,EAAE,gBAAgB;QAC7B,YAAY,EAAZ,sBAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,kDAAO,iBAAiB,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/dist/index.js

@@ -1,78 +1,23 @@
 "use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
 var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-const AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
-const TextSearchAdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/TextSearchAdapterType"));
-const ConnectionType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/ConnectionType"));
 const Plugin_1 = __importDefault(require("@jbrowse/core/Plugin"));
-const NCListAdapter_1 = require("./NCListAdapter");
-const JBrowse1TextSearchAdapter_1 = require("./JBrowse1TextSearchAdapter");
-const tracks_1 = require("@jbrowse/core/util/tracks");
-const JBrowse1Connection_1 = require("./JBrowse1Connection");
+const NCListAdapter_1 = __importDefault(require("./NCListAdapter"));
+const JBrowse1TextSearchAdapter_1 = __importDefault(require("./JBrowse1TextSearchAdapter"));
+const JBrowse1Connection_1 = __importDefault(require("./JBrowse1Connection"));
+const GuessNCList_1 = __importDefault(require("./GuessNCList"));
 class LegacyJBrowsePlugin extends Plugin_1.default {
     constructor() {
         super(...arguments);
         this.name = 'LegacyJBrowsePlugin';
     }
     install(pluginManager) {
-        pluginManager.addAdapterType(() => new AdapterType_1.default({
-            name: 'NCListAdapter',
-            configSchema: NCListAdapter_1.configSchema,
-            getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./NCListAdapter/NCListAdapter'))).then(r => r.default),
-        }));
-        pluginManager.addToExtensionPoint('Core-guessAdapterForLocation', (adapterGuesser) => {
-            return (file, index, adapterHint) => {
-                const regexGuess = /trackData.jsonz?$/i;
-                const adapterName = 'NCListAdapter';
-                const fileName = (0, tracks_1.getFileName)(file);
-                if (regexGuess.test(fileName) || adapterHint === adapterName) {
-                    return {
-                        type: adapterName,
-                        rootUrlTemplate: file,
-                    };
-                }
-                return adapterGuesser(file, index, adapterHint);
-            };
-        });
-        pluginManager.addTextSearchAdapterType(() => new TextSearchAdapterType_1.default({
-            name: 'JBrowse1TextSearchAdapter',
-            configSchema: JBrowse1TextSearchAdapter_1.configSchema,
-            AdapterClass: JBrowse1TextSearchAdapter_1.AdapterClass,
-            description: 'A JBrowse 1 text search adapter',
-        }));
-        pluginManager.addConnectionType(() => new ConnectionType_1.default({
-            name: 'JBrowse1Connection',
-            configSchema: JBrowse1Connection_1.configSchema,
-            stateModel: (0, JBrowse1Connection_1.modelFactory)(pluginManager),
-            displayName: 'JBrowse 1 Data',
-            description: 'A JBrowse 1 data directory',
-            url: '//jbrowse.org/',
-        }));
+        (0, NCListAdapter_1.default)(pluginManager);
+        (0, GuessNCList_1.default)(pluginManager);
+        (0, JBrowse1TextSearchAdapter_1.default)(pluginManager);
+        (0, JBrowse1Connection_1.default)(pluginManager);
     }
 }
 exports.default = LegacyJBrowsePlugin;

package/dist/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,kGAAyE;AACzE,sHAA6F;AAC7F,wGAA+E;AAC/E,kEAAyC;AAGzC,mDAA2E;AAC3E,2EAGoC;AACpC,sDAAuE;AAEvE,6DAG6B;AAE7B,MAAqB,mBAAoB,SAAQ,gBAAM;IAAvD;;QACE,SAAI,GAAG,qBAAqB,CAAA;IAwD9B,CAAC;IAtDC,OAAO,CAAC,aAA4B;QAClC,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,qBAAW,CAAC;YACd,IAAI,EAAE,eAAe;YACrB,YAAY,EAAE,4BAAyB;YACvC,eAAe,EAAE,GAAG,EAAE,CACpB,kDAAO,+BAA+B,IAAE,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;SAC/D,CAAC,CACL,CAAA;QACD,aAAa,CAAC,mBAAmB,CAC/B,8BAA8B,EAC9B,CAAC,cAA8B,EAAE,EAAE;YACjC,OAAO,CACL,IAAkB,EAClB,KAAoB,EACpB,WAAoB,EACpB,EAAE;gBACF,MAAM,UAAU,GAAG,oBAAoB,CAAA;gBACvC,MAAM,WAAW,GAAG,eAAe,CAAA;gBACnC,MAAM,QAAQ,GAAG,IAAA,oBAAW,EAAC,IAAI,CAAC,CAAA;gBAClC,IAAI,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,IAAI,WAAW,KAAK,WAAW,EAAE;oBAC5D,OAAO;wBACL,IAAI,EAAE,WAAW;wBACjB,eAAe,EAAE,IAAI;qBACtB,CAAA;iBACF;gBACD,OAAO,cAAc,CAAC,IAAI,EAAE,KAAK,EAAE,WAAW,CAAC,CAAA;YACjD,CAAC,CAAA;QACH,CAAC,CACF,CAAA;QAED,aAAa,CAAC,wBAAwB,CACpC,GAAG,EAAE,CACH,IAAI,+BAAqB,CAAC;YACxB,IAAI,EAAE,2BAA2B;YACjC,YAAY,EAAE,wCAA2B;YACzC,YAAY,EAAE,wCAA8B;YAC5C,WAAW,EAAE,iCAAiC;SAC/C,CAAC,CACL,CAAA;QAED,aAAa,CAAC,iBAAiB,CAC7B,GAAG,EAAE,CACH,IAAI,wBAAc,CAAC;YACjB,IAAI,EAAE,oBAAoB;YAC1B,YAAY,EAAE,iCAAoB;YAClC,UAAU,EAAE,IAAA,iCAAoB,EAAC,aAAa,CAAC;YAC/C,WAAW,EAAE,gBAAgB;YAC7B,WAAW,EAAE,4BAA4B;YACzC,GAAG,EAAE,gBAAgB;SACtB,CAAC,CACL,CAAA;IACH,CAAC;CACF;AAzDD,sCAyDC"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;;;AAAA,kEAAyC;AAEzC,oEAA4C;AAC5C,4FAAoE;AACpE,8EAAsD;AACtD,gEAAwC;AAExC,MAAqB,mBAAoB,SAAQ,gBAAM;IAAvD;;QACE,SAAI,GAAG,qBAAqB,CAAA;IAQ9B,CAAC;IANC,OAAO,CAAC,aAA4B;QAClC,IAAA,uBAAc,EAAC,aAAa,CAAC,CAAA;QAC7B,IAAA,qBAAY,EAAC,aAAa,CAAC,CAAA;QAC3B,IAAA,mCAA0B,EAAC,aAAa,CAAC,CAAA;QACzC,IAAA,4BAAmB,EAAC,aAAa,CAAC,CAAA;IACpC,CAAC;CACF;AATD,sCASC"}

package/esm/GuessNCList/index.d.ts

@@ -0,0 +1,3 @@
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/esm/GuessNCList/index.js

@@ -0,0 +1,18 @@
+import { getFileName } from '@jbrowse/core/util/tracks';
+export default (pluginManager) => {
+    pluginManager.addToExtensionPoint('Core-guessAdapterForLocation', (adapterGuesser) => {
+        return (file, index, adapterHint) => {
+            const regexGuess = /trackData.jsonz?$/i;
+            const adapterName = 'NCListAdapter';
+            const fileName = getFileName(file);
+            if (regexGuess.test(fileName) || adapterHint === adapterName) {
+                return {
+                    type: adapterName,
+                    rootUrlTemplate: file,
+                };
+            }
+            return adapterGuesser(file, index, adapterHint);
+        };
+    });
+};
+//# sourceMappingURL=index.js.map

package/esm/GuessNCList/index.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/GuessNCList/index.ts"],"names":[],"mappings":"AACA,OAAO,EAAkB,WAAW,EAAE,MAAM,2BAA2B,CAAA;AAGvE,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,mBAAmB,CAC/B,8BAA8B,EAC9B,CAAC,cAA8B,EAAE,EAAE;QACjC,OAAO,CACL,IAAkB,EAClB,KAAoB,EACpB,WAAoB,EACpB,EAAE;YACF,MAAM,UAAU,GAAG,oBAAoB,CAAA;YACvC,MAAM,WAAW,GAAG,eAAe,CAAA;YACnC,MAAM,QAAQ,GAAG,WAAW,CAAC,IAAI,CAAC,CAAA;YAClC,IAAI,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,IAAI,WAAW,KAAK,WAAW,EAAE;gBAC5D,OAAO;oBACL,IAAI,EAAE,WAAW;oBACjB,eAAe,EAAE,IAAI;iBACtB,CAAA;aACF;YACD,OAAO,cAAc,CAAC,IAAI,EAAE,KAAK,EAAE,WAAW,CAAC,CAAA;QACjD,CAAC,CAAA;IACH,CAAC,CACF,CAAA;AACH,CAAC,CAAA"}

package/esm/JBrowse1Connection/index.d.ts

@@ -1,2 +1,3 @@
-export { default as modelFactory } from './model';
-export { default as configSchema } from './configSchema';
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/esm/JBrowse1Connection/index.js

@@ -1,3 +1,15 @@
-export { default as modelFactory } from './model';
-export { default as configSchema } from './configSchema';
+import ConnectionType from '@jbrowse/core/pluggableElementTypes/ConnectionType';
+// locals
+import modelFactory from './model';
+import configSchema from './configSchema';
+export default (pluginManager) => {
+    pluginManager.addConnectionType(() => new ConnectionType({
+        name: 'JBrowse1Connection',
+        configSchema,
+        stateModel: modelFactory(pluginManager),
+        displayName: 'JBrowse 1 Data',
+        description: 'A JBrowse 1 data directory',
+        url: '//jbrowse.org/',
+    }));
+};
 //# sourceMappingURL=index.js.map

package/esm/JBrowse1Connection/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1Connection/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,YAAY,EAAE,MAAM,SAAS,CAAA;AACjD,OAAO,EAAE,OAAO,IAAI,YAAY,EAAE,MAAM,gBAAgB,CAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1Connection/index.ts"],"names":[],"mappings":"AACA,OAAO,cAAc,MAAM,oDAAoD,CAAA;AAE/E,SAAS;AACT,OAAO,YAAY,MAAM,SAAS,CAAA;AAClC,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,iBAAiB,CAC7B,GAAG,EAAE,CACH,IAAI,cAAc,CAAC;QACjB,IAAI,EAAE,oBAAoB;QAC1B,YAAY;QACZ,UAAU,EAAE,YAAY,CAAC,aAAa,CAAC;QACvC,WAAW,EAAE,gBAAgB;QAC7B,WAAW,EAAE,4BAA4B;QACzC,GAAG,EAAE,gBAAgB;KACtB,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/esm/JBrowse1TextSearchAdapter/index.d.ts

@@ -1,2 +1,3 @@
-export { default as AdapterClass } from './JBrowse1TextSearchAdapter';
-export { default as configSchema } from './configSchema';
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/esm/JBrowse1TextSearchAdapter/index.js

@@ -1,3 +1,13 @@
-export { default as AdapterClass } from './JBrowse1TextSearchAdapter';
-export { default as configSchema } from './configSchema';
+import TextSearchAdapterType from '@jbrowse/core/pluggableElementTypes/TextSearchAdapterType';
+// locals
+import AdapterClass from './JBrowse1TextSearchAdapter';
+import configSchema from './configSchema';
+export default (pluginManager) => {
+    pluginManager.addTextSearchAdapterType(() => new TextSearchAdapterType({
+        name: 'JBrowse1TextSearchAdapter',
+        configSchema,
+        AdapterClass,
+        description: 'A JBrowse 1 text search adapter',
+    }));
+};
 //# sourceMappingURL=index.js.map

package/esm/JBrowse1TextSearchAdapter/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1TextSearchAdapter/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,YAAY,EAAE,MAAM,6BAA6B,CAAA;AACrE,OAAO,EAAE,OAAO,IAAI,YAAY,EAAE,MAAM,gBAAgB,CAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1TextSearchAdapter/index.ts"],"names":[],"mappings":"AACA,OAAO,qBAAqB,MAAM,2DAA2D,CAAA;AAE7F,SAAS;AACT,OAAO,YAAY,MAAM,6BAA6B,CAAA;AACtD,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,wBAAwB,CACpC,GAAG,EAAE,CACH,IAAI,qBAAqB,CAAC;QACxB,IAAI,EAAE,2BAA2B;QACjC,YAAY;QACZ,YAAY;QACZ,WAAW,EAAE,iCAAiC;KAC/C,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/esm/NCListAdapter/index.d.ts

@@ -1 +1,3 @@
-export { default as configSchema } from './configSchema';
+import PluginManager from '@jbrowse/core/PluginManager';
+declare const _default: (pluginManager: PluginManager) => void;
+export default _default;

package/esm/NCListAdapter/index.js

@@ -1,2 +1,11 @@
-export { default as configSchema } from './configSchema';
+import { AdapterType } from '@jbrowse/core/pluggableElementTypes';
+import configSchema from './configSchema';
+export default (pluginManager) => {
+    pluginManager.addAdapterType(() => new AdapterType({
+        name: 'NCListAdapter',
+        displayName: 'NCList adapter',
+        configSchema,
+        getAdapterClass: () => import('./NCListAdapter').then(r => r.default),
+    }));
+};
 //# sourceMappingURL=index.js.map

package/esm/NCListAdapter/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/NCListAdapter/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,OAAO,IAAI,YAAY,EAAE,MAAM,gBAAgB,CAAA"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/NCListAdapter/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,WAAW,EAAE,MAAM,qCAAqC,CAAA;AAGjE,OAAO,YAAY,MAAM,gBAAgB,CAAA;AAEzC,eAAe,CAAC,aAA4B,EAAE,EAAE;IAC9C,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;QACd,IAAI,EAAE,eAAe;QACrB,WAAW,EAAE,gBAAgB;QAC7B,YAAY;QACZ,eAAe,EAAE,GAAG,EAAE,CAAC,MAAM,CAAC,iBAAiB,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;KACtE,CAAC,CACL,CAAA;AACH,CAAC,CAAA"}

package/esm/index.js

@@ -1,50 +1,18 @@
-import AdapterType from '@jbrowse/core/pluggableElementTypes/AdapterType';
-import TextSearchAdapterType from '@jbrowse/core/pluggableElementTypes/TextSearchAdapterType';
-import ConnectionType from '@jbrowse/core/pluggableElementTypes/ConnectionType';
 import Plugin from '@jbrowse/core/Plugin';
-import { configSchema as ncListAdapterConfigSchema } from './NCListAdapter';
-import { AdapterClass as JBrowse1TextSearchAdapterClass, configSchema as jbrowse1AdapterConfigSchema, } from './JBrowse1TextSearchAdapter';
-import { getFileName } from '@jbrowse/core/util/tracks';
-import { configSchema as jbrowse1ConfigSchema, modelFactory as jbrowse1ModelFactory, } from './JBrowse1Connection';
+import NCListAdapterF from './NCListAdapter';
+import JBrowse1TextSearchAdapterF from './JBrowse1TextSearchAdapter';
+import JBrowse1ConnectionF from './JBrowse1Connection';
+import GuessNCListF from './GuessNCList';
 export default class LegacyJBrowsePlugin extends Plugin {
     constructor() {
         super(...arguments);
         this.name = 'LegacyJBrowsePlugin';
     }
     install(pluginManager) {
-        pluginManager.addAdapterType(() => new AdapterType({
-            name: 'NCListAdapter',
-            configSchema: ncListAdapterConfigSchema,
-            getAdapterClass: () => import('./NCListAdapter/NCListAdapter').then(r => r.default),
-        }));
-        pluginManager.addToExtensionPoint('Core-guessAdapterForLocation', (adapterGuesser) => {
-            return (file, index, adapterHint) => {
-                const regexGuess = /trackData.jsonz?$/i;
-                const adapterName = 'NCListAdapter';
-                const fileName = getFileName(file);
-                if (regexGuess.test(fileName) || adapterHint === adapterName) {
-                    return {
-                        type: adapterName,
-                        rootUrlTemplate: file,
-                    };
-                }
-                return adapterGuesser(file, index, adapterHint);
-            };
-        });
-        pluginManager.addTextSearchAdapterType(() => new TextSearchAdapterType({
-            name: 'JBrowse1TextSearchAdapter',
-            configSchema: jbrowse1AdapterConfigSchema,
-            AdapterClass: JBrowse1TextSearchAdapterClass,
-            description: 'A JBrowse 1 text search adapter',
-        }));
-        pluginManager.addConnectionType(() => new ConnectionType({
-            name: 'JBrowse1Connection',
-            configSchema: jbrowse1ConfigSchema,
-            stateModel: jbrowse1ModelFactory(pluginManager),
-            displayName: 'JBrowse 1 Data',
-            description: 'A JBrowse 1 data directory',
-            url: '//jbrowse.org/',
-        }));
+        NCListAdapterF(pluginManager);
+        GuessNCListF(pluginManager);
+        JBrowse1TextSearchAdapterF(pluginManager);
+        JBrowse1ConnectionF(pluginManager);
     }
 }
 //# sourceMappingURL=index.js.map

package/esm/index.js.map

@@ -1 +1 @@
-{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,WAAW,MAAM,iDAAiD,CAAA;AACzE,OAAO,qBAAqB,MAAM,2DAA2D,CAAA;AAC7F,OAAO,cAAc,MAAM,oDAAoD,CAAA;AAC/E,OAAO,MAAM,MAAM,sBAAsB,CAAA;AAGzC,OAAO,EAAE,YAAY,IAAI,yBAAyB,EAAE,MAAM,iBAAiB,CAAA;AAC3E,OAAO,EACL,YAAY,IAAI,8BAA8B,EAC9C,YAAY,IAAI,2BAA2B,GAC5C,MAAM,6BAA6B,CAAA;AACpC,OAAO,EAAkB,WAAW,EAAE,MAAM,2BAA2B,CAAA;AAEvE,OAAO,EACL,YAAY,IAAI,oBAAoB,EACpC,YAAY,IAAI,oBAAoB,GACrC,MAAM,sBAAsB,CAAA;AAE7B,MAAM,CAAC,OAAO,OAAO,mBAAoB,SAAQ,MAAM;IAAvD;;QACE,SAAI,GAAG,qBAAqB,CAAA;IAwD9B,CAAC;IAtDC,OAAO,CAAC,aAA4B;QAClC,aAAa,CAAC,cAAc,CAC1B,GAAG,EAAE,CACH,IAAI,WAAW,CAAC;YACd,IAAI,EAAE,eAAe;YACrB,YAAY,EAAE,yBAAyB;YACvC,eAAe,EAAE,GAAG,EAAE,CACpB,MAAM,CAAC,+BAA+B,CAAC,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC;SAC/D,CAAC,CACL,CAAA;QACD,aAAa,CAAC,mBAAmB,CAC/B,8BAA8B,EAC9B,CAAC,cAA8B,EAAE,EAAE;YACjC,OAAO,CACL,IAAkB,EAClB,KAAoB,EACpB,WAAoB,EACpB,EAAE;gBACF,MAAM,UAAU,GAAG,oBAAoB,CAAA;gBACvC,MAAM,WAAW,GAAG,eAAe,CAAA;gBACnC,MAAM,QAAQ,GAAG,WAAW,CAAC,IAAI,CAAC,CAAA;gBAClC,IAAI,UAAU,CAAC,IAAI,CAAC,QAAQ,CAAC,IAAI,WAAW,KAAK,WAAW,EAAE;oBAC5D,OAAO;wBACL,IAAI,EAAE,WAAW;wBACjB,eAAe,EAAE,IAAI;qBACtB,CAAA;iBACF;gBACD,OAAO,cAAc,CAAC,IAAI,EAAE,KAAK,EAAE,WAAW,CAAC,CAAA;YACjD,CAAC,CAAA;QACH,CAAC,CACF,CAAA;QAED,aAAa,CAAC,wBAAwB,CACpC,GAAG,EAAE,CACH,IAAI,qBAAqB,CAAC;YACxB,IAAI,EAAE,2BAA2B;YACjC,YAAY,EAAE,2BAA2B;YACzC,YAAY,EAAE,8BAA8B;YAC5C,WAAW,EAAE,iCAAiC;SAC/C,CAAC,CACL,CAAA;QAED,aAAa,CAAC,iBAAiB,CAC7B,GAAG,EAAE,CACH,IAAI,cAAc,CAAC;YACjB,IAAI,EAAE,oBAAoB;YAC1B,YAAY,EAAE,oBAAoB;YAClC,UAAU,EAAE,oBAAoB,CAAC,aAAa,CAAC;YAC/C,WAAW,EAAE,gBAAgB;YAC7B,WAAW,EAAE,4BAA4B;YACzC,GAAG,EAAE,gBAAgB;SACtB,CAAC,CACL,CAAA;IACH,CAAC;CACF"}
+{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,MAAM,MAAM,sBAAsB,CAAA;AAEzC,OAAO,cAAc,MAAM,iBAAiB,CAAA;AAC5C,OAAO,0BAA0B,MAAM,6BAA6B,CAAA;AACpE,OAAO,mBAAmB,MAAM,sBAAsB,CAAA;AACtD,OAAO,YAAY,MAAM,eAAe,CAAA;AAExC,MAAM,CAAC,OAAO,OAAO,mBAAoB,SAAQ,MAAM;IAAvD;;QACE,SAAI,GAAG,qBAAqB,CAAA;IAQ9B,CAAC;IANC,OAAO,CAAC,aAA4B;QAClC,cAAc,CAAC,aAAa,CAAC,CAAA;QAC7B,YAAY,CAAC,aAAa,CAAC,CAAA;QAC3B,0BAA0B,CAAC,aAAa,CAAC,CAAA;QACzC,mBAAmB,CAAC,aAAa,CAAC,CAAA;IACpC,CAAC;CACF"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-legacy-jbrowse",
-  "version": "2.2.2",
+  "version": "2.3.1",
   "description": "JBrowse 2 plugin for connecting to and reading JBrowse 1 data",
   "keywords": [
     "jbrowse",
@@ -56,5 +56,5 @@
   "distModule": "esm/index.js",
   "srcModule": "src/index.ts",
   "module": "esm/index.js",
-  "gitHead": "abbc00e8feedbc58de84a7a3e735ec0224909b29"
+  "gitHead": "75c4cba2f50c626c62881abd5851dbf2435c2401"
 }

package/src/GuessNCList/index.ts

@@ -0,0 +1,27 @@
+import PluginManager from '@jbrowse/core/PluginManager'
+import { AdapterGuesser, getFileName } from '@jbrowse/core/util/tracks'
+import { FileLocation } from '@jbrowse/core/util/types'
+
+export default (pluginManager: PluginManager) => {
+  pluginManager.addToExtensionPoint(
+    'Core-guessAdapterForLocation',
+    (adapterGuesser: AdapterGuesser) => {
+      return (
+        file: FileLocation,
+        index?: FileLocation,
+        adapterHint?: string,
+      ) => {
+        const regexGuess = /trackData.jsonz?$/i
+        const adapterName = 'NCListAdapter'
+        const fileName = getFileName(file)
+        if (regexGuess.test(fileName) || adapterHint === adapterName) {
+          return {
+            type: adapterName,
+            rootUrlTemplate: file,
+          }
+        }
+        return adapterGuesser(file, index, adapterHint)
+      }
+    },
+  )
+}

package/src/JBrowse1Connection/index.ts

@@ -1,2 +1,20 @@
-export { default as modelFactory } from './model'
-export { default as configSchema } from './configSchema'
+import PluginManager from '@jbrowse/core/PluginManager'
+import ConnectionType from '@jbrowse/core/pluggableElementTypes/ConnectionType'
+
+// locals
+import modelFactory from './model'
+import configSchema from './configSchema'
+
+export default (pluginManager: PluginManager) => {
+  pluginManager.addConnectionType(
+    () =>
+      new ConnectionType({
+        name: 'JBrowse1Connection',
+        configSchema,
+        stateModel: modelFactory(pluginManager),
+        displayName: 'JBrowse 1 Data',
+        description: 'A JBrowse 1 data directory',
+        url: '//jbrowse.org/',
+      }),
+  )
+}

package/src/JBrowse1TextSearchAdapter/index.ts

@@ -1,2 +1,18 @@
-export { default as AdapterClass } from './JBrowse1TextSearchAdapter'
-export { default as configSchema } from './configSchema'
+import PluginManager from '@jbrowse/core/PluginManager'
+import TextSearchAdapterType from '@jbrowse/core/pluggableElementTypes/TextSearchAdapterType'
+
+// locals
+import AdapterClass from './JBrowse1TextSearchAdapter'
+import configSchema from './configSchema'
+
+export default (pluginManager: PluginManager) => {
+  pluginManager.addTextSearchAdapterType(
+    () =>
+      new TextSearchAdapterType({
+        name: 'JBrowse1TextSearchAdapter',
+        configSchema,
+        AdapterClass,
+        description: 'A JBrowse 1 text search adapter',
+      }),
+  )
+}

package/src/NCListAdapter/index.ts

@@ -1 +1,16 @@
-export { default as configSchema } from './configSchema'
+import { AdapterType } from '@jbrowse/core/pluggableElementTypes'
+import PluginManager from '@jbrowse/core/PluginManager'
+
+import configSchema from './configSchema'
+
+export default (pluginManager: PluginManager) => {
+  pluginManager.addAdapterType(
+    () =>
+      new AdapterType({
+        name: 'NCListAdapter',
+        displayName: 'NCList adapter',
+        configSchema,
+        getAdapterClass: () => import('./NCListAdapter').then(r => r.default),
+      }),
+  )
+}

package/src/index.ts

@@ -1,76 +1,17 @@
-import AdapterType from '@jbrowse/core/pluggableElementTypes/AdapterType'
-import TextSearchAdapterType from '@jbrowse/core/pluggableElementTypes/TextSearchAdapterType'
-import ConnectionType from '@jbrowse/core/pluggableElementTypes/ConnectionType'
 import Plugin from '@jbrowse/core/Plugin'
 import PluginManager from '@jbrowse/core/PluginManager'
-import { FileLocation } from '@jbrowse/core/util/types'
-import { configSchema as ncListAdapterConfigSchema } from './NCListAdapter'
-import {
-  AdapterClass as JBrowse1TextSearchAdapterClass,
-  configSchema as jbrowse1AdapterConfigSchema,
-} from './JBrowse1TextSearchAdapter'
-import { AdapterGuesser, getFileName } from '@jbrowse/core/util/tracks'
-
-import {
-  configSchema as jbrowse1ConfigSchema,
-  modelFactory as jbrowse1ModelFactory,
-} from './JBrowse1Connection'
+import NCListAdapterF from './NCListAdapter'
+import JBrowse1TextSearchAdapterF from './JBrowse1TextSearchAdapter'
+import JBrowse1ConnectionF from './JBrowse1Connection'
+import GuessNCListF from './GuessNCList'
 
 export default class LegacyJBrowsePlugin extends Plugin {
   name = 'LegacyJBrowsePlugin'
 
   install(pluginManager: PluginManager) {
-    pluginManager.addAdapterType(
-      () =>
-        new AdapterType({
-          name: 'NCListAdapter',
-          configSchema: ncListAdapterConfigSchema,
-          getAdapterClass: () =>
-            import('./NCListAdapter/NCListAdapter').then(r => r.default),
-        }),
-    )
-    pluginManager.addToExtensionPoint(
-      'Core-guessAdapterForLocation',
-      (adapterGuesser: AdapterGuesser) => {
-        return (
-          file: FileLocation,
-          index?: FileLocation,
-          adapterHint?: string,
-        ) => {
-          const regexGuess = /trackData.jsonz?$/i
-          const adapterName = 'NCListAdapter'
-          const fileName = getFileName(file)
-          if (regexGuess.test(fileName) || adapterHint === adapterName) {
-            return {
-              type: adapterName,
-              rootUrlTemplate: file,
-            }
-          }
-          return adapterGuesser(file, index, adapterHint)
-        }
-      },
-    )
-
-    pluginManager.addTextSearchAdapterType(
-      () =>
-        new TextSearchAdapterType({
-          name: 'JBrowse1TextSearchAdapter',
-          configSchema: jbrowse1AdapterConfigSchema,
-          AdapterClass: JBrowse1TextSearchAdapterClass,
-          description: 'A JBrowse 1 text search adapter',
-        }),
-    )
-
-    pluginManager.addConnectionType(
-      () =>
-        new ConnectionType({
-          name: 'JBrowse1Connection',
-          configSchema: jbrowse1ConfigSchema,
-          stateModel: jbrowse1ModelFactory(pluginManager),
-          displayName: 'JBrowse 1 Data',
-          description: 'A JBrowse 1 data directory',
-          url: '//jbrowse.org/',
-        }),
-    )
+    NCListAdapterF(pluginManager)
+    GuessNCListF(pluginManager)
+    JBrowse1TextSearchAdapterF(pluginManager)
+    JBrowse1ConnectionF(pluginManager)
   }
 }