@jbrowse/plugin-jobs-management 2.6.1 → 2.6.2

package/dist/JobsListWidget/components/CurrentJobCard.js

@@ -55,4 +55,3 @@ function CurrentJobCard({ job }) {
                 } }, "Cancel"))) : null));
 }
 exports.default = (0, mobx_react_1.observer)(CurrentJobCard);
-//# sourceMappingURL=CurrentJobCard.js.map

package/dist/JobsListWidget/components/JobCard.js

@@ -14,4 +14,3 @@ function JobCard({ job }) {
                 job.name))));
 }
 exports.default = (0, mobx_react_1.observer)(JobCard);
-//# sourceMappingURL=JobCard.js.map

package/dist/JobsListWidget/components/JobsListWidget.js

@@ -55,4 +55,3 @@ function JobsListWidget({ model }) {
                     react_1.default.createElement(material_1.Typography, { variant: "body1" }, "No jobs completed")))))));
 }
 exports.default = (0, mobx_react_1.observer)(JobsListWidget);
-//# sourceMappingURL=JobsListWidget.js.map

package/dist/JobsListWidget/index.js

@@ -10,4 +10,3 @@ Object.defineProperty(exports, "ReactComponent", { enumerable: true, get: functi
 var model_1 = require("./model");
 Object.defineProperty(exports, "stateModelFactory", { enumerable: true, get: function () { return __importDefault(model_1).default; } });
 exports.configSchema = (0, configuration_1.ConfigurationSchema)('JobsListWidget', {});
-//# sourceMappingURL=index.js.map

package/dist/JobsListWidget/model.js

@@ -77,4 +77,3 @@ function f(pluginManager) {
     }));
 }
 exports.default = f;
-//# sourceMappingURL=model.js.map

package/dist/index.js

@@ -71,4 +71,3 @@ class default_1 extends Plugin_1.default {
     }
 }
 exports.default = default_1;
-//# sourceMappingURL=index.js.map

package/esm/JobsListWidget/components/CurrentJobCard.js

@@ -30,4 +30,3 @@ function CurrentJobCard({ job }) {
                 } }, "Cancel"))) : null));
 }
 export default observer(CurrentJobCard);
-//# sourceMappingURL=CurrentJobCard.js.map

package/esm/JobsListWidget/components/JobCard.js

@@ -9,4 +9,3 @@ function JobCard({ job }) {
                 job.name))));
 }
 export default observer(JobCard);
-//# sourceMappingURL=JobCard.js.map

package/esm/JobsListWidget/components/JobsListWidget.js

@@ -50,4 +50,3 @@ function JobsListWidget({ model }) {
                     React.createElement(Typography, { variant: "body1" }, "No jobs completed")))))));
 }
 export default observer(JobsListWidget);
-//# sourceMappingURL=JobsListWidget.js.map

package/esm/JobsListWidget/index.js

@@ -2,4 +2,3 @@ import { ConfigurationSchema } from '@jbrowse/core/configuration';
 export { default as ReactComponent } from './components/JobsListWidget';
 export { default as stateModelFactory } from './model';
 export const configSchema = ConfigurationSchema('JobsListWidget', {});
-//# sourceMappingURL=index.js.map

package/esm/JobsListWidget/model.js

@@ -73,4 +73,3 @@ export default function f(pluginManager) {
         },
     }));
 }
-//# sourceMappingURL=model.js.map

package/esm/index.js

@@ -42,4 +42,3 @@ export default class extends Plugin {
         }
     }
 }
-//# sourceMappingURL=index.js.map

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-jobs-management",
-  "version": "2.6.1",
+  "version": "2.6.2",
   "description": "JBrowse 2 jobs management",
   "keywords": [
     "jbrowse",
@@ -20,7 +20,6 @@
   "main": "dist/index.js",
   "files": [
     "dist",
-    "src",
     "esm"
   ],
   "scripts": {
@@ -33,11 +32,11 @@
     "useSrc": "node ../../scripts/useSrc.js",
     "prebuild": "npm run clean",
     "build:esm": "tsc --build tsconfig.build.esm.json",
-    "build:es5": "tsc --build tsconfig.build.es5.json",
+    "build:commonjs": "tsc --build tsconfig.build.commonjs.json",
     "clean": "rimraf dist esm *.tsbuildinfo"
   },
   "dependencies": {
-    "@jbrowse/text-indexing": "^2.6.1",
+    "@jbrowse/text-indexing": "^2.6.2",
     "@mui/icons-material": "^5.0.0"
   },
   "peerDependencies": {
@@ -55,5 +54,5 @@
   "publishConfig": {
     "access": "public"
   },
-  "gitHead": "1cbe7ba097fb2d2763c776e5e429e4670cdd583c"
+  "gitHead": "bbea587a402d9974acdd804a33f4b77f31a2fd5f"
 }

package/dist/JobsListWidget/components/CurrentJobCard.js.map

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package/dist/JobsListWidget/components/JobCard.js.map

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package/dist/JobsListWidget/components/JobsListWidget.js.map

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package/dist/JobsListWidget/index.js.map

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package/dist/JobsListWidget/model.js.map

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package/dist/index.js.map

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package/esm/JobsListWidget/components/CurrentJobCard.js.map

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package/esm/JobsListWidget/components/JobCard.js.map

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package/esm/JobsListWidget/components/JobsListWidget.js.map

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package/esm/JobsListWidget/index.js.map

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package/src/JobsListWidget/components/CurrentJobCard.tsx

@@ -1,73 +0,0 @@
-import React, { useState } from 'react'
-import { observer } from 'mobx-react'
-import {
-  Box,
-  Button,
-  Card,
-  CardActions,
-  CardContent,
-  LinearProgress,
-  Typography,
-} from '@mui/material'
-import { NewJob } from '../model'
-
-function CurrentJobCard({ job }: { job: NewJob }) {
-  const [clicked, setClicked] = useState(false)
-  return (
-    <Card variant="outlined">
-      <CardContent>
-        <Typography variant="body1">
-          <strong>{'Name: '}</strong>
-          {job.name}
-        </Typography>
-        <Typography variant="body1">
-          <strong>{'Message: '}</strong>
-          {job.statusMessage || 'No message provided'}
-        </Typography>
-        <Box
-          sx={{
-            display: 'flex',
-            alignItems: 'center',
-            marginTop: 10,
-            marginBottom: 10,
-            marginLeft: 10,
-          }}
-        >
-          {job.progressPct === 0 || job.progressPct === 100 ? (
-            <Box sx={{ width: '100%' }}>
-              <LinearProgress variant="indeterminate" />
-            </Box>
-          ) : (
-            <>
-              <Box sx={{ width: '100%' }}>
-                <LinearProgress variant="determinate" value={job.progressPct} />
-              </Box>
-              <Box sx={{ m: 1 }}>
-                <Typography>{`${Math.round(
-                  job.progressPct || 0,
-                )}%`}</Typography>
-              </Box>
-            </>
-          )}
-        </Box>
-      </CardContent>
-      {job.cancelCallback ? (
-        <CardActions>
-          <Button
-            variant="contained"
-            color="inherit"
-            disabled={clicked || job.progressPct === 0}
-            onClick={() => {
-              job.cancelCallback && job.cancelCallback()
-              setClicked(true)
-            }}
-          >
-            Cancel
-          </Button>
-        </CardActions>
-      ) : null}
-    </Card>
-  )
-}
-
-export default observer(CurrentJobCard)

package/src/JobsListWidget/components/JobCard.tsx

@@ -1,19 +0,0 @@
-import React from 'react'
-import { observer } from 'mobx-react'
-import { Card, CardContent, Typography } from '@mui/material'
-import { NewJob } from '../model'
-
-function JobCard({ job }: { job: NewJob }) {
-  return (
-    <Card variant="outlined">
-      <CardContent>
-        <Typography variant="body1">
-          <strong>{'Name: '}</strong>
-          {job.name}
-        </Typography>
-      </CardContent>
-    </Card>
-  )
-}
-
-export default observer(JobCard)

package/src/JobsListWidget/components/JobsListWidget.tsx

@@ -1,103 +0,0 @@
-import React from 'react'
-import {
-  Accordion,
-  AccordionSummary,
-  Card,
-  CardContent,
-  Typography,
-} from '@mui/material'
-import { makeStyles } from 'tss-react/mui'
-import { observer } from 'mobx-react'
-
-// icons
-import ExpandMoreIcon from '@mui/icons-material/ExpandMore'
-
-import JobCard from './JobCard'
-import CurrentJobCard from './CurrentJobCard'
-import { JobsListModel, NewJob } from '../model'
-
-const useStyles = makeStyles()(theme => ({
-  root: {
-    margin: theme.spacing(1),
-  },
-  expandIcon: {
-    color: theme.palette.tertiary.contrastText,
-  },
-  button: {
-    marginTop: theme.spacing(1),
-    marginRight: theme.spacing(1),
-  },
-  adminBadge: {
-    margin: '0.5em',
-    borderRadius: 3,
-    backgroundColor: theme.palette.quaternary.main,
-    padding: '1em',
-    display: 'flex',
-    alignContent: 'center',
-  },
-}))
-
-function JobsListWidget({ model }: { model: JobsListModel }) {
-  const { classes } = useStyles()
-  const { jobs, finished, queued } = model
-  return (
-    <div className={classes.root}>
-      <Accordion defaultExpanded>
-        <AccordionSummary
-          expandIcon={<ExpandMoreIcon className={classes.expandIcon} />}
-        >
-          <Typography variant="h5">Jobs</Typography>
-        </AccordionSummary>
-        {jobs.length ? (
-          jobs.map((job: NewJob, index: number) => (
-            <CurrentJobCard job={job} key={`${JSON.stringify(job)}-${index}`} />
-          ))
-        ) : (
-          <Card variant="outlined">
-            <CardContent>
-              <Typography variant="body1">No jobs</Typography>
-            </CardContent>
-          </Card>
-        )}
-      </Accordion>
-      <Accordion defaultExpanded>
-        <AccordionSummary
-          expandIcon={<ExpandMoreIcon className={classes.expandIcon} />}
-        >
-          <Typography variant="h5">Queued jobs</Typography>
-        </AccordionSummary>
-        {queued.length ? (
-          queued.map((job: NewJob, index: number) => (
-            <JobCard job={job} key={`${JSON.stringify(job)}-${index}`} />
-          ))
-        ) : (
-          <Card variant="outlined">
-            <CardContent>
-              <Typography variant="body1">No queued jobs</Typography>
-            </CardContent>
-          </Card>
-        )}
-      </Accordion>
-      <Accordion defaultExpanded>
-        <AccordionSummary
-          expandIcon={<ExpandMoreIcon className={classes.expandIcon} />}
-        >
-          <Typography variant="h5">Jobs completed</Typography>
-        </AccordionSummary>
-        {finished.length ? (
-          finished.map((job: NewJob, index: number) => (
-            <JobCard key={`${JSON.stringify(job)}-${index}`} job={job} />
-          ))
-        ) : (
-          <Card variant="outlined">
-            <CardContent>
-              <Typography variant="body1">No jobs completed</Typography>
-            </CardContent>
-          </Card>
-        )}
-      </Accordion>
-    </div>
-  )
-}
-
-export default observer(JobsListWidget)

package/src/JobsListWidget/index.ts

@@ -1,5 +0,0 @@
-import { ConfigurationSchema } from '@jbrowse/core/configuration'
-
-export { default as ReactComponent } from './components/JobsListWidget'
-export { default as stateModelFactory } from './model'
-export const configSchema = ConfigurationSchema('JobsListWidget', {})

package/src/JobsListWidget/model.ts

@@ -1,85 +0,0 @@
-import { types, Instance, SnapshotIn } from 'mobx-state-tree'
-import PluginManager from '@jbrowse/core/PluginManager'
-import { ElementId } from '@jbrowse/core/util/types/mst'
-
-export const Job = types
-  .model('Job', {
-    name: types.string,
-    statusMessage: types.maybe(types.string),
-    progressPct: types.number,
-  })
-  .volatile(self => ({
-    cancelCallback() {},
-  }))
-  .actions(self => ({
-    setCancelCallback(cancelCallback: () => void) {
-      self.cancelCallback = cancelCallback
-    },
-    setStatusMessage(message?: string) {
-      self.statusMessage = message
-    },
-    setProgressPct(pct: number) {
-      self.progressPct = pct
-    },
-  }))
-
-export interface NewJob extends SnapshotIn<typeof Job> {
-  cancelCallback(): void
-}
-
-export default function f(pluginManager: PluginManager) {
-  return types
-    .model('JobsListModel', {
-      id: ElementId,
-      type: types.literal('JobsListWidget'),
-      jobs: types.array(Job),
-      finished: types.array(Job),
-      queued: types.array(Job),
-    })
-    .actions(self => ({
-      addJob(job: NewJob) {
-        const { cancelCallback } = job
-        const length = self.jobs.push(job)
-        const addedJob = self.jobs[length - 1]
-        addedJob.setCancelCallback(cancelCallback)
-        return addedJob
-      },
-      removeJob(jobName: string) {
-        const indx = self.jobs.findIndex(job => job.name === jobName)
-        const removed = self.jobs[indx]
-        self.jobs.splice(indx, 1)
-        return removed
-      },
-      addFinishedJob(job: NewJob) {
-        self.finished.push(job)
-        return self.finished
-      },
-      addQueuedJob(job: NewJob) {
-        self.queued.push(job)
-        return self.finished
-      },
-      removeQueuedJob(jobName: string) {
-        const indx = self.queued.findIndex(job => job.name === jobName)
-        const removed = self.queued[indx]
-        self.queued.splice(indx, 1)
-        return removed
-      },
-      updateJobStatusMessage(jobName: string, message?: string) {
-        const job = self.jobs.find(job => job.name === jobName)
-        if (!job) {
-          throw new Error(`No job found with name ${jobName}`)
-        }
-        job.setStatusMessage(message)
-      },
-      updateJobProgressPct(jobName: string, pct: number) {
-        const job = self.jobs.find(job => job.name === jobName)
-        if (!job) {
-          throw new Error(`No job found with name ${jobName}`)
-        }
-        job.setProgressPct(pct)
-      },
-    }))
-}
-
-export type JobsListStateModel = ReturnType<typeof f>
-export type JobsListModel = Instance<JobsListStateModel>

package/src/index.test.ts

@@ -1,3 +0,0 @@
-test('easy', () => {
-  expect(1).toBe(1)
-})

package/src/index.ts

@@ -1,51 +0,0 @@
-import { lazy } from 'react'
-import Plugin from '@jbrowse/core/Plugin'
-import PluginManager from '@jbrowse/core/PluginManager'
-import { SessionWithWidgets, isAbstractMenuManager } from '@jbrowse/core/util'
-import { Indexing } from '@jbrowse/core/ui/Icons'
-import WidgetType from '@jbrowse/core/pluggableElementTypes/WidgetType'
-import {
-  stateModelFactory as JobsListStateModelFactory,
-  configSchema as JobsListConfigSchema,
-} from '../../jobs-management/src/JobsListWidget'
-import { isSessionModelWithWidgets } from '@jbrowse/core/util'
-
-export default class extends Plugin {
-  name = 'JobsManagementPlugin'
-
-  install(pluginManager: PluginManager) {
-    pluginManager.addWidgetType(() => {
-      return new WidgetType({
-        name: 'JobsListWidget',
-        heading: 'Running jobs',
-        configSchema: JobsListConfigSchema,
-        stateModel: JobsListStateModelFactory(pluginManager),
-        ReactComponent: lazy(
-          () =>
-            import(
-              '../../jobs-management/src/JobsListWidget/components/JobsListWidget'
-            ),
-        ),
-      })
-    })
-  }
-  configure(pluginManager: PluginManager) {
-    if (isAbstractMenuManager(pluginManager.rootModel)) {
-      pluginManager.rootModel.appendToMenu('Tools', {
-        label: 'Jobs list',
-        icon: Indexing, // TODO: pick a better icon
-        onClick: (session: SessionWithWidgets) => {
-          if (isSessionModelWithWidgets(session)) {
-            const { widgets } = session
-            let jobStatusWidget = widgets.get('JobsList')
-            if (!jobStatusWidget) {
-              jobStatusWidget = session.addWidget('JobsListWidget', 'JobsList')
-            } else {
-              session.showWidget(jobStatusWidget)
-            }
-          }
-        },
-      })
-    }
-  }
-}