@jbrowse/plugin-jobs-management 2.17.0 → 3.0.0

package/dist/JobsListWidget/components/CurrentJobCard.d.ts

@@ -1,6 +1,5 @@
-import React from 'react';
-import { NewJob } from '../model';
+import type { NewJob } from '../model';
 declare const CurrentJobCard: ({ job, }: {
     job: NewJob;
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default CurrentJobCard;

package/dist/JobsListWidget/components/CurrentJobCard.js

@@ -1,58 +1,21 @@
 "use strict";
-var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    var desc = Object.getOwnPropertyDescriptor(m, k);
-    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
-      desc = { enumerable: true, get: function() { return m[k]; } };
-    }
-    Object.defineProperty(o, k2, desc);
-}) : (function(o, m, k, k2) {
-    if (k2 === undefined) k2 = k;
-    o[k2] = m[k];
-}));
-var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
-    Object.defineProperty(o, "default", { enumerable: true, value: v });
-}) : function(o, v) {
-    o["default"] = v;
-});
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
 Object.defineProperty(exports, "__esModule", { value: true });
-const react_1 = __importStar(require("react"));
-const mobx_react_1 = require("mobx-react");
+const jsx_runtime_1 = require("react/jsx-runtime");
+const react_1 = require("react");
 const material_1 = require("@mui/material");
+const mobx_react_1 = require("mobx-react");
 const CurrentJobCard = (0, mobx_react_1.observer)(function CurrentJobCard({ job, }) {
     const [clicked, setClicked] = (0, react_1.useState)(false);
-    return (react_1.default.createElement(material_1.Card, { variant: "outlined" },
-        react_1.default.createElement(material_1.CardContent, null,
-            react_1.default.createElement(material_1.Typography, { variant: "body1" },
-                react_1.default.createElement("strong", null, 'Name: '),
-                job.name),
-            react_1.default.createElement(material_1.Typography, { variant: "body1" },
-                react_1.default.createElement("strong", null, 'Message: '),
-                job.statusMessage || 'No message provided'),
-            react_1.default.createElement(material_1.Box, { sx: {
-                    display: 'flex',
-                    alignItems: 'center',
-                    marginTop: 10,
-                    marginBottom: 10,
-                    marginLeft: 10,
-                } }, job.progressPct === 0 || job.progressPct === 100 ? (react_1.default.createElement(material_1.Box, { sx: { width: '100%' } },
-                react_1.default.createElement(material_1.LinearProgress, { variant: "indeterminate" }))) : (react_1.default.createElement(react_1.default.Fragment, null,
-                react_1.default.createElement(material_1.Box, { sx: { width: '100%' } },
-                    react_1.default.createElement(material_1.LinearProgress, { variant: "determinate", value: job.progressPct })),
-                react_1.default.createElement(material_1.Box, { sx: { m: 1 } },
-                    react_1.default.createElement(material_1.Typography, null, `${Math.round(job.progressPct || 0)}%`)))))),
-        react_1.default.createElement(material_1.CardActions, null,
-            react_1.default.createElement(material_1.Button, { variant: "contained", color: "inherit", disabled: clicked || job.progressPct === 0, onClick: () => {
-                    job.setStatusMessage('Aborted via cancel button');
-                    job.cancelCallback();
-                    setClicked(true);
-                } }, "Cancel"))));
+    return ((0, jsx_runtime_1.jsxs)(material_1.Card, { variant: "outlined", children: [(0, jsx_runtime_1.jsxs)(material_1.CardContent, { children: [(0, jsx_runtime_1.jsxs)(material_1.Typography, { variant: "body1", children: [(0, jsx_runtime_1.jsx)("strong", { children: 'Name: ' }), job.name] }), (0, jsx_runtime_1.jsxs)(material_1.Typography, { variant: "body1", children: [(0, jsx_runtime_1.jsx)("strong", { children: 'Message: ' }), job.statusMessage || 'No message provided'] }), (0, jsx_runtime_1.jsx)(material_1.Box, { sx: {
+                            display: 'flex',
+                            alignItems: 'center',
+                            marginTop: 10,
+                            marginBottom: 10,
+                            marginLeft: 10,
+                        }, children: job.progressPct === 0 || job.progressPct === 100 ? ((0, jsx_runtime_1.jsx)(material_1.Box, { sx: { width: '100%' }, children: (0, jsx_runtime_1.jsx)(material_1.LinearProgress, { variant: "indeterminate" }) })) : ((0, jsx_runtime_1.jsxs)(jsx_runtime_1.Fragment, { children: [(0, jsx_runtime_1.jsx)(material_1.Box, { sx: { width: '100%' }, children: (0, jsx_runtime_1.jsx)(material_1.LinearProgress, { variant: "determinate", value: job.progressPct }) }), (0, jsx_runtime_1.jsx)(material_1.Box, { sx: { m: 1 }, children: (0, jsx_runtime_1.jsx)(material_1.Typography, { children: `${Math.round(job.progressPct || 0)}%` }) })] })) })] }), (0, jsx_runtime_1.jsx)(material_1.CardActions, { children: (0, jsx_runtime_1.jsx)(material_1.Button, { variant: "contained", color: "inherit", disabled: clicked || job.progressPct === 0, onClick: () => {
+                        job.setStatusMessage('Aborted via cancel button');
+                        job.cancelCallback();
+                        setClicked(true);
+                    }, children: "Cancel" }) })] }));
 });
 exports.default = CurrentJobCard;

package/dist/JobsListWidget/components/JobCard.d.ts

@@ -1,6 +1,5 @@
-import React from 'react';
-import { NewJob } from '../model';
+import type { NewJob } from '../model';
 declare const JobCard: ({ job }: {
     job: NewJob;
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default JobCard;

package/dist/JobsListWidget/components/JobCard.js

@@ -1,19 +1,9 @@
 "use strict";
-var __importDefault = (this && this.__importDefault) || function (mod) {
-    return (mod && mod.__esModule) ? mod : { "default": mod };
-};
 Object.defineProperty(exports, "__esModule", { value: true });
-const react_1 = __importDefault(require("react"));
-const mobx_react_1 = require("mobx-react");
+const jsx_runtime_1 = require("react/jsx-runtime");
 const material_1 = require("@mui/material");
+const mobx_react_1 = require("mobx-react");
 const JobCard = (0, mobx_react_1.observer)(function JobCard({ job }) {
-    return (react_1.default.createElement(material_1.Card, { variant: "outlined" },
-        react_1.default.createElement(material_1.CardContent, null,
-            react_1.default.createElement(material_1.Typography, { variant: "body1" },
-                react_1.default.createElement("strong", null, 'Name: '),
-                job.name),
-            job.statusMessage ? (react_1.default.createElement(material_1.Typography, { variant: "body1" },
-                react_1.default.createElement("strong", null, 'Message: '),
-                job.statusMessage)) : null)));
+    return ((0, jsx_runtime_1.jsx)(material_1.Card, { variant: "outlined", children: (0, jsx_runtime_1.jsxs)(material_1.CardContent, { children: [(0, jsx_runtime_1.jsxs)(material_1.Typography, { variant: "body1", children: [(0, jsx_runtime_1.jsx)("strong", { children: 'Name: ' }), job.name] }), job.statusMessage ? ((0, jsx_runtime_1.jsxs)(material_1.Typography, { variant: "body1", children: [(0, jsx_runtime_1.jsx)("strong", { children: 'Message: ' }), job.statusMessage] })) : null] }) }));
 });
 exports.default = JobCard;

package/dist/JobsListWidget/components/JobsListWidget.d.ts

@@ -1,6 +1,5 @@
-import React from 'react';
-import { JobsListModel } from '../model';
+import type { JobsListModel } from '../model';
 declare const JobsListWidget: ({ model }: {
     model: JobsListModel;
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default JobsListWidget;

package/dist/JobsListWidget/components/JobsListWidget.js

@@ -3,14 +3,13 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-const react_1 = __importDefault(require("react"));
+const jsx_runtime_1 = require("react/jsx-runtime");
+const ExpandMore_1 = __importDefault(require("@mui/icons-material/ExpandMore"));
 const material_1 = require("@mui/material");
-const mui_1 = require("tss-react/mui");
 const mobx_react_1 = require("mobx-react");
-// icons
-const ExpandMore_1 = __importDefault(require("@mui/icons-material/ExpandMore"));
-const JobCard_1 = __importDefault(require("./JobCard"));
+const mui_1 = require("tss-react/mui");
 const CurrentJobCard_1 = __importDefault(require("./CurrentJobCard"));
+const JobCard_1 = __importDefault(require("./JobCard"));
 const useStyles = (0, mui_1.makeStyles)()(theme => ({
     root: {
         margin: theme.spacing(1),
@@ -22,30 +21,6 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
 const JobsListWidget = (0, mobx_react_1.observer)(function ({ model }) {
     const { classes } = useStyles();
     const { jobs, finished, queued, aborted } = model;
-    return (react_1.default.createElement("div", { className: classes.root },
-        react_1.default.createElement(material_1.Accordion, { defaultExpanded: true },
-            react_1.default.createElement(material_1.AccordionSummary, { expandIcon: react_1.default.createElement(ExpandMore_1.default, { className: classes.expandIcon }) },
-                react_1.default.createElement(material_1.Typography, { variant: "h5" }, "Running jobs")),
-            jobs.length ? (jobs.map((job, index) => (react_1.default.createElement(CurrentJobCard_1.default, { job: job, key: `${JSON.stringify(job)}-${index}` })))) : (react_1.default.createElement(material_1.Card, { variant: "outlined" },
-                react_1.default.createElement(material_1.CardContent, null,
-                    react_1.default.createElement(material_1.Typography, { variant: "body1" }, "No running jobs"))))),
-        react_1.default.createElement(material_1.Accordion, { defaultExpanded: true },
-            react_1.default.createElement(material_1.AccordionSummary, { expandIcon: react_1.default.createElement(ExpandMore_1.default, { className: classes.expandIcon }) },
-                react_1.default.createElement(material_1.Typography, { variant: "h5" }, "Queued jobs")),
-            queued.length ? (queued.map((job, index) => (react_1.default.createElement(JobCard_1.default, { job: job, key: `${JSON.stringify(job)}-${index}` })))) : (react_1.default.createElement(material_1.Card, { variant: "outlined" },
-                react_1.default.createElement(material_1.CardContent, null,
-                    react_1.default.createElement(material_1.Typography, { variant: "body1" }, "No queued jobs"))))),
-        react_1.default.createElement(material_1.Accordion, { defaultExpanded: true },
-            react_1.default.createElement(material_1.AccordionSummary, { expandIcon: react_1.default.createElement(ExpandMore_1.default, { className: classes.expandIcon }) },
-                react_1.default.createElement(material_1.Typography, { variant: "h5" }, "Completed jobs")),
-            finished.length ? (finished.map((job, index) => (react_1.default.createElement(JobCard_1.default, { key: `${JSON.stringify(job)}-${index}`, job: job })))) : (react_1.default.createElement(material_1.Card, { variant: "outlined" },
-                react_1.default.createElement(material_1.CardContent, null,
-                    react_1.default.createElement(material_1.Typography, { variant: "body1" }, "No completed jobs"))))),
-        react_1.default.createElement(material_1.Accordion, { defaultExpanded: true },
-            react_1.default.createElement(material_1.AccordionSummary, { expandIcon: react_1.default.createElement(ExpandMore_1.default, { className: classes.expandIcon }) },
-                react_1.default.createElement(material_1.Typography, { variant: "h5" }, "Aborted jobs")),
-            aborted.length ? (aborted.map((job, index) => (react_1.default.createElement(JobCard_1.default, { key: `${JSON.stringify(job)}-${index}`, job: job })))) : (react_1.default.createElement(material_1.Card, { variant: "outlined" },
-                react_1.default.createElement(material_1.CardContent, null,
-                    react_1.default.createElement(material_1.Typography, { variant: "body1" }, "No aborted jobs")))))));
+    return ((0, jsx_runtime_1.jsxs)("div", { className: classes.root, children: [(0, jsx_runtime_1.jsxs)(material_1.Accordion, { defaultExpanded: true, children: [(0, jsx_runtime_1.jsx)(material_1.AccordionSummary, { expandIcon: (0, jsx_runtime_1.jsx)(ExpandMore_1.default, { className: classes.expandIcon }), children: (0, jsx_runtime_1.jsx)(material_1.Typography, { variant: "h5", children: "Running jobs" }) }), jobs.length ? (jobs.map((job, index) => ((0, jsx_runtime_1.jsx)(CurrentJobCard_1.default, { job: job }, `${JSON.stringify(job)}-${index}`)))) : ((0, jsx_runtime_1.jsx)(material_1.Card, { variant: "outlined", children: (0, jsx_runtime_1.jsx)(material_1.CardContent, { children: (0, jsx_runtime_1.jsx)(material_1.Typography, { variant: "body1", children: "No running jobs" }) }) }))] }), (0, jsx_runtime_1.jsxs)(material_1.Accordion, { defaultExpanded: true, children: [(0, jsx_runtime_1.jsx)(material_1.AccordionSummary, { expandIcon: (0, jsx_runtime_1.jsx)(ExpandMore_1.default, { className: classes.expandIcon }), children: (0, jsx_runtime_1.jsx)(material_1.Typography, { variant: "h5", children: "Queued jobs" }) }), queued.length ? (queued.map((job, index) => ((0, jsx_runtime_1.jsx)(JobCard_1.default, { job: job }, `${JSON.stringify(job)}-${index}`)))) : ((0, jsx_runtime_1.jsx)(material_1.Card, { variant: "outlined", children: (0, jsx_runtime_1.jsx)(material_1.CardContent, { children: (0, jsx_runtime_1.jsx)(material_1.Typography, { variant: "body1", children: "No queued jobs" }) }) }))] }), (0, jsx_runtime_1.jsxs)(material_1.Accordion, { defaultExpanded: true, children: [(0, jsx_runtime_1.jsx)(material_1.AccordionSummary, { expandIcon: (0, jsx_runtime_1.jsx)(ExpandMore_1.default, { className: classes.expandIcon }), children: (0, jsx_runtime_1.jsx)(material_1.Typography, { variant: "h5", children: "Completed jobs" }) }), finished.length ? (finished.map((job, index) => ((0, jsx_runtime_1.jsx)(JobCard_1.default, { job: job }, `${JSON.stringify(job)}-${index}`)))) : ((0, jsx_runtime_1.jsx)(material_1.Card, { variant: "outlined", children: (0, jsx_runtime_1.jsx)(material_1.CardContent, { children: (0, jsx_runtime_1.jsx)(material_1.Typography, { variant: "body1", children: "No completed jobs" }) }) }))] }), (0, jsx_runtime_1.jsxs)(material_1.Accordion, { defaultExpanded: true, children: [(0, jsx_runtime_1.jsx)(material_1.AccordionSummary, { expandIcon: (0, jsx_runtime_1.jsx)(ExpandMore_1.default, { className: classes.expandIcon }), children: (0, jsx_runtime_1.jsx)(material_1.Typography, { variant: "h5", children: "Aborted jobs" }) }), aborted.length ? (aborted.map((job, index) => ((0, jsx_runtime_1.jsx)(JobCard_1.default, { job: job }, `${JSON.stringify(job)}-${index}`)))) : ((0, jsx_runtime_1.jsx)(material_1.Card, { variant: "outlined", children: (0, jsx_runtime_1.jsx)(material_1.CardContent, { children: (0, jsx_runtime_1.jsx)(material_1.Typography, { variant: "body1", children: "No aborted jobs" }) }) }))] })] }));
 });
 exports.default = JobsListWidget;

package/dist/JobsListWidget/index.d.ts

@@ -1,3 +1,3 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
 export default function JobsListWidgetF(pluginManager: PluginManager): void;

package/dist/JobsListWidget/index.js

@@ -15,19 +15,29 @@ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (
 }) : function(o, v) {
     o["default"] = v;
 });
-var __importStar = (this && this.__importStar) || function (mod) {
-    if (mod && mod.__esModule) return mod;
-    var result = {};
-    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
-    __setModuleDefault(result, mod);
-    return result;
-};
+var __importStar = (this && this.__importStar) || (function () {
+    var ownKeys = function(o) {
+        ownKeys = Object.getOwnPropertyNames || function (o) {
+            var ar = [];
+            for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
+            return ar;
+        };
+        return ownKeys(o);
+    };
+    return function (mod) {
+        if (mod && mod.__esModule) return mod;
+        var result = {};
+        if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
+        __setModuleDefault(result, mod);
+        return result;
+    };
+})();
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.configSchema = void 0;
 exports.default = JobsListWidgetF;
+const react_1 = require("react");
 const configuration_1 = require("@jbrowse/core/configuration");
 const pluggableElementTypes_1 = require("@jbrowse/core/pluggableElementTypes");
-const react_1 = require("react");
 const model_1 = require("./model");
 exports.configSchema = (0, configuration_1.ConfigurationSchema)('JobsListWidget', {});
 function JobsListWidgetF(pluginManager) {

package/dist/JobsListWidget/jobModel.d.ts

@@ -1,32 +1,11 @@
-/**
- * #stateModel
- */
 export declare const Job: import("mobx-state-tree").IModelType<{
-    /**
-     * #property
-     */
     name: import("mobx-state-tree").ISimpleType<string>;
-    /**
-     * #property
-     */
     statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-    /**
-     * #property
-     */
     progressPct: import("mobx-state-tree").ISimpleType<number>;
 }, {
     cancelCallback(): void;
 } & {
-    /**
-     * #action
-     */
     setCancelCallback(cancelCallback: () => void): void;
-    /**
-     * #action
-     */
     setStatusMessage(message?: string): void;
-    /**
-     * #action
-     */
     setProgressPct(pct: number): void;
 }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;

package/dist/JobsListWidget/jobModel.js

@@ -2,43 +2,22 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.Job = void 0;
 const mobx_state_tree_1 = require("mobx-state-tree");
-/**
- * #stateModel
- */
 exports.Job = mobx_state_tree_1.types
     .model('Job', {
-    /**
-     * #property
-     */
     name: mobx_state_tree_1.types.string,
-    /**
-     * #property
-     */
     statusMessage: mobx_state_tree_1.types.maybe(mobx_state_tree_1.types.string),
-    /**
-     * #property
-     */
     progressPct: mobx_state_tree_1.types.number,
 })
     .volatile(() => ({
     cancelCallback() { },
 }))
     .actions(self => ({
-    /**
-     * #action
-     */
     setCancelCallback(cancelCallback) {
         self.cancelCallback = cancelCallback;
     },
-    /**
-     * #action
-     */
     setStatusMessage(message) {
         self.statusMessage = message;
     },
-    /**
-     * #action
-     */
     setProgressPct(pct) {
         self.progressPct = pct;
     },

package/dist/JobsListWidget/model.d.ts

@@ -1,25 +1,13 @@
-import { Instance, SnapshotIn } from 'mobx-state-tree';
-import PluginManager from '@jbrowse/core/PluginManager';
 import { Job } from './jobModel';
+import type PluginManager from '@jbrowse/core/PluginManager';
+import type { Instance, SnapshotIn } from 'mobx-state-tree';
 export interface NewJob extends SnapshotIn<typeof Job> {
     cancelCallback(): void;
     setStatusMessage(msg?: string): void;
 }
-/**
- * #stateModel JobsListModel
- */
 export declare function stateModelFactory(_pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
-    /**
-     * #property
-     */
     id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    /**
-     * #property
-     */
     type: import("mobx-state-tree").ISimpleType<"JobsListWidget">;
-    /**
-     * #property
-     */
     jobs: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -31,9 +19,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    /**
-     * #property
-     */
     finished: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -45,9 +30,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    /**
-     * #property
-     */
     queued: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -59,9 +41,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    /**
-     * #property
-     */
     aborted: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -74,9 +53,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
 }, {
-    /**
-     * #action
-     */
     addJob(job: NewJob): {
         name: string;
         statusMessage: string | undefined;
@@ -98,9 +74,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    /**
-     * #action
-     */
     removeJob(jobName: string): ({
         name: string;
         statusMessage: string | undefined;
@@ -122,9 +95,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
-    /**
-     * #action
-     */
     addFinishedJob(job: NewJob): import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -146,9 +116,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    /**
-     * #action
-     */
     addQueuedJob(job: NewJob): import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -170,9 +137,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    /**
-     * #action
-     */
     addAbortedJob(job: NewJob): import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -194,9 +158,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    /**
-     * #action
-     */
     removeQueuedJob(jobName: string): ({
         name: string;
         statusMessage: string | undefined;
@@ -218,13 +179,7 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
-    /**
-     * #action
-     */
     updateJobStatusMessage(jobName: string, message?: string): void;
-    /**
-     * #action
-     */
     updateJobProgressPct(jobName: string, pct: number): void;
 }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
 export type JobsListStateModel = ReturnType<typeof stateModelFactory>;

package/dist/JobsListWidget/model.js

@@ -1,44 +1,20 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.stateModelFactory = stateModelFactory;
-const mobx_state_tree_1 = require("mobx-state-tree");
 const mst_1 = require("@jbrowse/core/util/types/mst");
+const mobx_state_tree_1 = require("mobx-state-tree");
 const jobModel_1 = require("./jobModel");
-/**
- * #stateModel JobsListModel
- */
 function stateModelFactory(_pluginManager) {
     return mobx_state_tree_1.types
         .model('JobsListModel', {
-        /**
-         * #property
-         */
         id: mst_1.ElementId,
-        /**
-         * #property
-         */
         type: mobx_state_tree_1.types.literal('JobsListWidget'),
-        /**
-         * #property
-         */
         jobs: mobx_state_tree_1.types.array(jobModel_1.Job),
-        /**
-         * #property
-         */
         finished: mobx_state_tree_1.types.array(jobModel_1.Job),
-        /**
-         * #property
-         */
         queued: mobx_state_tree_1.types.array(jobModel_1.Job),
-        /**
-         * #property
-         */
         aborted: mobx_state_tree_1.types.array(jobModel_1.Job),
     })
         .actions(self => ({
-        /**
-         * #action
-         */
         addJob(job) {
             const { cancelCallback } = job;
             const length = self.jobs.push(job);
@@ -46,48 +22,30 @@ function stateModelFactory(_pluginManager) {
             addedJob.setCancelCallback(cancelCallback);
             return addedJob;
         },
-        /**
-         * #action
-         */
         removeJob(jobName) {
             const indx = self.jobs.findIndex(job => job.name === jobName);
             const removed = self.jobs[indx];
             self.jobs.splice(indx, 1);
             return removed;
         },
-        /**
-         * #action
-         */
         addFinishedJob(job) {
             self.finished.push(job);
             return self.finished;
         },
-        /**
-         * #action
-         */
         addQueuedJob(job) {
             self.queued.push(job);
             return self.finished;
         },
-        /**
-         * #action
-         */
         addAbortedJob(job) {
             self.aborted.push(job);
             return self.aborted;
         },
-        /**
-         * #action
-         */
         removeQueuedJob(jobName) {
             const indx = self.queued.findIndex(job => job.name === jobName);
             const removed = self.queued[indx];
             self.queued.splice(indx, 1);
             return removed;
         },
-        /**
-         * #action
-         */
         updateJobStatusMessage(jobName, message) {
             const job = self.jobs.find(job => job.name === jobName);
             if (!job) {
@@ -95,9 +53,6 @@ function stateModelFactory(_pluginManager) {
             }
             job.setStatusMessage(message);
         },
-        /**
-         * #action
-         */
         updateJobProgressPct(jobName, pct) {
             const job = self.jobs.find(job => job.name === jobName);
             if (!job) {

package/dist/index.d.ts

@@ -1,5 +1,5 @@
 import Plugin from '@jbrowse/core/Plugin';
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default class JobsManagementPlugin extends Plugin {
     name: string;
     install(pluginManager: PluginManager): void;

package/dist/index.js

@@ -4,9 +4,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 const Plugin_1 = __importDefault(require("@jbrowse/core/Plugin"));
-const util_1 = require("@jbrowse/core/util");
 const Icons_1 = require("@jbrowse/core/ui/Icons");
-const util_2 = require("@jbrowse/core/util");
+const util_1 = require("@jbrowse/core/util");
 const JobsListWidget_1 = __importDefault(require("./JobsListWidget"));
 class JobsManagementPlugin extends Plugin_1.default {
     constructor() {
@@ -20,9 +19,9 @@ class JobsManagementPlugin extends Plugin_1.default {
         if ((0, util_1.isAbstractMenuManager)(pluginManager.rootModel)) {
             pluginManager.rootModel.appendToMenu('Tools', {
                 label: 'Jobs list',
-                icon: Icons_1.Indexing, // TODO: pick a better icon
+                icon: Icons_1.Indexing,
                 onClick: (session) => {
-                    if ((0, util_2.isSessionModelWithWidgets)(session)) {
+                    if ((0, util_1.isSessionModelWithWidgets)(session)) {
                         const { widgets } = session;
                         let jobStatusWidget = widgets.get('JobsList');
                         if (!jobStatusWidget) {

package/esm/JobsListWidget/components/CurrentJobCard.d.ts

@@ -1,6 +1,5 @@
-import React from 'react';
-import { NewJob } from '../model';
+import type { NewJob } from '../model';
 declare const CurrentJobCard: ({ job, }: {
     job: NewJob;
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default CurrentJobCard;

package/esm/JobsListWidget/components/CurrentJobCard.js

@@ -1,33 +1,19 @@
-import React, { useState } from 'react';
-import { observer } from 'mobx-react';
+import { jsx as _jsx, jsxs as _jsxs, Fragment as _Fragment } from "react/jsx-runtime";
+import { useState } from 'react';
 import { Box, Button, Card, CardActions, CardContent, LinearProgress, Typography, } from '@mui/material';
+import { observer } from 'mobx-react';
 const CurrentJobCard = observer(function CurrentJobCard({ job, }) {
     const [clicked, setClicked] = useState(false);
-    return (React.createElement(Card, { variant: "outlined" },
-        React.createElement(CardContent, null,
-            React.createElement(Typography, { variant: "body1" },
-                React.createElement("strong", null, 'Name: '),
-                job.name),
-            React.createElement(Typography, { variant: "body1" },
-                React.createElement("strong", null, 'Message: '),
-                job.statusMessage || 'No message provided'),
-            React.createElement(Box, { sx: {
-                    display: 'flex',
-                    alignItems: 'center',
-                    marginTop: 10,
-                    marginBottom: 10,
-                    marginLeft: 10,
-                } }, job.progressPct === 0 || job.progressPct === 100 ? (React.createElement(Box, { sx: { width: '100%' } },
-                React.createElement(LinearProgress, { variant: "indeterminate" }))) : (React.createElement(React.Fragment, null,
-                React.createElement(Box, { sx: { width: '100%' } },
-                    React.createElement(LinearProgress, { variant: "determinate", value: job.progressPct })),
-                React.createElement(Box, { sx: { m: 1 } },
-                    React.createElement(Typography, null, `${Math.round(job.progressPct || 0)}%`)))))),
-        React.createElement(CardActions, null,
-            React.createElement(Button, { variant: "contained", color: "inherit", disabled: clicked || job.progressPct === 0, onClick: () => {
-                    job.setStatusMessage('Aborted via cancel button');
-                    job.cancelCallback();
-                    setClicked(true);
-                } }, "Cancel"))));
+    return (_jsxs(Card, { variant: "outlined", children: [_jsxs(CardContent, { children: [_jsxs(Typography, { variant: "body1", children: [_jsx("strong", { children: 'Name: ' }), job.name] }), _jsxs(Typography, { variant: "body1", children: [_jsx("strong", { children: 'Message: ' }), job.statusMessage || 'No message provided'] }), _jsx(Box, { sx: {
+                            display: 'flex',
+                            alignItems: 'center',
+                            marginTop: 10,
+                            marginBottom: 10,
+                            marginLeft: 10,
+                        }, children: job.progressPct === 0 || job.progressPct === 100 ? (_jsx(Box, { sx: { width: '100%' }, children: _jsx(LinearProgress, { variant: "indeterminate" }) })) : (_jsxs(_Fragment, { children: [_jsx(Box, { sx: { width: '100%' }, children: _jsx(LinearProgress, { variant: "determinate", value: job.progressPct }) }), _jsx(Box, { sx: { m: 1 }, children: _jsx(Typography, { children: `${Math.round(job.progressPct || 0)}%` }) })] })) })] }), _jsx(CardActions, { children: _jsx(Button, { variant: "contained", color: "inherit", disabled: clicked || job.progressPct === 0, onClick: () => {
+                        job.setStatusMessage('Aborted via cancel button');
+                        job.cancelCallback();
+                        setClicked(true);
+                    }, children: "Cancel" }) })] }));
 });
 export default CurrentJobCard;

package/esm/JobsListWidget/components/JobCard.d.ts

@@ -1,6 +1,5 @@
-import React from 'react';
-import { NewJob } from '../model';
+import type { NewJob } from '../model';
 declare const JobCard: ({ job }: {
     job: NewJob;
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default JobCard;

package/esm/JobsListWidget/components/JobCard.js

@@ -1,14 +1,7 @@
-import React from 'react';
-import { observer } from 'mobx-react';
+import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
 import { Card, CardContent, Typography } from '@mui/material';
+import { observer } from 'mobx-react';
 const JobCard = observer(function JobCard({ job }) {
-    return (React.createElement(Card, { variant: "outlined" },
-        React.createElement(CardContent, null,
-            React.createElement(Typography, { variant: "body1" },
-                React.createElement("strong", null, 'Name: '),
-                job.name),
-            job.statusMessage ? (React.createElement(Typography, { variant: "body1" },
-                React.createElement("strong", null, 'Message: '),
-                job.statusMessage)) : null)));
+    return (_jsx(Card, { variant: "outlined", children: _jsxs(CardContent, { children: [_jsxs(Typography, { variant: "body1", children: [_jsx("strong", { children: 'Name: ' }), job.name] }), job.statusMessage ? (_jsxs(Typography, { variant: "body1", children: [_jsx("strong", { children: 'Message: ' }), job.statusMessage] })) : null] }) }));
 });
 export default JobCard;

package/esm/JobsListWidget/components/JobsListWidget.d.ts

@@ -1,6 +1,5 @@
-import React from 'react';
-import { JobsListModel } from '../model';
+import type { JobsListModel } from '../model';
 declare const JobsListWidget: ({ model }: {
     model: JobsListModel;
-}) => React.JSX.Element;
+}) => import("react/jsx-runtime").JSX.Element;
 export default JobsListWidget;

package/esm/JobsListWidget/components/JobsListWidget.js

@@ -1,11 +1,10 @@
-import React from 'react';
+import { jsx as _jsx, jsxs as _jsxs } from "react/jsx-runtime";
+import ExpandMoreIcon from '@mui/icons-material/ExpandMore';
 import { Accordion, AccordionSummary, Card, CardContent, Typography, } from '@mui/material';
-import { makeStyles } from 'tss-react/mui';
 import { observer } from 'mobx-react';
-// icons
-import ExpandMoreIcon from '@mui/icons-material/ExpandMore';
-import JobCard from './JobCard';
+import { makeStyles } from 'tss-react/mui';
 import CurrentJobCard from './CurrentJobCard';
+import JobCard from './JobCard';
 const useStyles = makeStyles()(theme => ({
     root: {
         margin: theme.spacing(1),
@@ -17,30 +16,6 @@ const useStyles = makeStyles()(theme => ({
 const JobsListWidget = observer(function ({ model }) {
     const { classes } = useStyles();
     const { jobs, finished, queued, aborted } = model;
-    return (React.createElement("div", { className: classes.root },
-        React.createElement(Accordion, { defaultExpanded: true },
-            React.createElement(AccordionSummary, { expandIcon: React.createElement(ExpandMoreIcon, { className: classes.expandIcon }) },
-                React.createElement(Typography, { variant: "h5" }, "Running jobs")),
-            jobs.length ? (jobs.map((job, index) => (React.createElement(CurrentJobCard, { job: job, key: `${JSON.stringify(job)}-${index}` })))) : (React.createElement(Card, { variant: "outlined" },
-                React.createElement(CardContent, null,
-                    React.createElement(Typography, { variant: "body1" }, "No running jobs"))))),
-        React.createElement(Accordion, { defaultExpanded: true },
-            React.createElement(AccordionSummary, { expandIcon: React.createElement(ExpandMoreIcon, { className: classes.expandIcon }) },
-                React.createElement(Typography, { variant: "h5" }, "Queued jobs")),
-            queued.length ? (queued.map((job, index) => (React.createElement(JobCard, { job: job, key: `${JSON.stringify(job)}-${index}` })))) : (React.createElement(Card, { variant: "outlined" },
-                React.createElement(CardContent, null,
-                    React.createElement(Typography, { variant: "body1" }, "No queued jobs"))))),
-        React.createElement(Accordion, { defaultExpanded: true },
-            React.createElement(AccordionSummary, { expandIcon: React.createElement(ExpandMoreIcon, { className: classes.expandIcon }) },
-                React.createElement(Typography, { variant: "h5" }, "Completed jobs")),
-            finished.length ? (finished.map((job, index) => (React.createElement(JobCard, { key: `${JSON.stringify(job)}-${index}`, job: job })))) : (React.createElement(Card, { variant: "outlined" },
-                React.createElement(CardContent, null,
-                    React.createElement(Typography, { variant: "body1" }, "No completed jobs"))))),
-        React.createElement(Accordion, { defaultExpanded: true },
-            React.createElement(AccordionSummary, { expandIcon: React.createElement(ExpandMoreIcon, { className: classes.expandIcon }) },
-                React.createElement(Typography, { variant: "h5" }, "Aborted jobs")),
-            aborted.length ? (aborted.map((job, index) => (React.createElement(JobCard, { key: `${JSON.stringify(job)}-${index}`, job: job })))) : (React.createElement(Card, { variant: "outlined" },
-                React.createElement(CardContent, null,
-                    React.createElement(Typography, { variant: "body1" }, "No aborted jobs")))))));
+    return (_jsxs("div", { className: classes.root, children: [_jsxs(Accordion, { defaultExpanded: true, children: [_jsx(AccordionSummary, { expandIcon: _jsx(ExpandMoreIcon, { className: classes.expandIcon }), children: _jsx(Typography, { variant: "h5", children: "Running jobs" }) }), jobs.length ? (jobs.map((job, index) => (_jsx(CurrentJobCard, { job: job }, `${JSON.stringify(job)}-${index}`)))) : (_jsx(Card, { variant: "outlined", children: _jsx(CardContent, { children: _jsx(Typography, { variant: "body1", children: "No running jobs" }) }) }))] }), _jsxs(Accordion, { defaultExpanded: true, children: [_jsx(AccordionSummary, { expandIcon: _jsx(ExpandMoreIcon, { className: classes.expandIcon }), children: _jsx(Typography, { variant: "h5", children: "Queued jobs" }) }), queued.length ? (queued.map((job, index) => (_jsx(JobCard, { job: job }, `${JSON.stringify(job)}-${index}`)))) : (_jsx(Card, { variant: "outlined", children: _jsx(CardContent, { children: _jsx(Typography, { variant: "body1", children: "No queued jobs" }) }) }))] }), _jsxs(Accordion, { defaultExpanded: true, children: [_jsx(AccordionSummary, { expandIcon: _jsx(ExpandMoreIcon, { className: classes.expandIcon }), children: _jsx(Typography, { variant: "h5", children: "Completed jobs" }) }), finished.length ? (finished.map((job, index) => (_jsx(JobCard, { job: job }, `${JSON.stringify(job)}-${index}`)))) : (_jsx(Card, { variant: "outlined", children: _jsx(CardContent, { children: _jsx(Typography, { variant: "body1", children: "No completed jobs" }) }) }))] }), _jsxs(Accordion, { defaultExpanded: true, children: [_jsx(AccordionSummary, { expandIcon: _jsx(ExpandMoreIcon, { className: classes.expandIcon }), children: _jsx(Typography, { variant: "h5", children: "Aborted jobs" }) }), aborted.length ? (aborted.map((job, index) => (_jsx(JobCard, { job: job }, `${JSON.stringify(job)}-${index}`)))) : (_jsx(Card, { variant: "outlined", children: _jsx(CardContent, { children: _jsx(Typography, { variant: "body1", children: "No aborted jobs" }) }) }))] })] }));
 });
 export default JobsListWidget;

package/esm/JobsListWidget/index.d.ts

@@ -1,3 +1,3 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
 export default function JobsListWidgetF(pluginManager: PluginManager): void;

package/esm/JobsListWidget/index.js

@@ -1,6 +1,6 @@
+import { lazy } from 'react';
 import { ConfigurationSchema } from '@jbrowse/core/configuration';
 import { WidgetType } from '@jbrowse/core/pluggableElementTypes';
-import { lazy } from 'react';
 import { stateModelFactory } from './model';
 export const configSchema = ConfigurationSchema('JobsListWidget', {});
 export default function JobsListWidgetF(pluginManager) {

package/esm/JobsListWidget/jobModel.d.ts

@@ -1,32 +1,11 @@
-/**
- * #stateModel
- */
 export declare const Job: import("mobx-state-tree").IModelType<{
-    /**
-     * #property
-     */
     name: import("mobx-state-tree").ISimpleType<string>;
-    /**
-     * #property
-     */
     statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
-    /**
-     * #property
-     */
     progressPct: import("mobx-state-tree").ISimpleType<number>;
 }, {
     cancelCallback(): void;
 } & {
-    /**
-     * #action
-     */
     setCancelCallback(cancelCallback: () => void): void;
-    /**
-     * #action
-     */
     setStatusMessage(message?: string): void;
-    /**
-     * #action
-     */
     setProgressPct(pct: number): void;
 }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;

package/esm/JobsListWidget/jobModel.js

@@ -1,41 +1,20 @@
 import { types } from 'mobx-state-tree';
-/**
- * #stateModel
- */
 export const Job = types
     .model('Job', {
-    /**
-     * #property
-     */
     name: types.string,
-    /**
-     * #property
-     */
     statusMessage: types.maybe(types.string),
-    /**
-     * #property
-     */
     progressPct: types.number,
 })
     .volatile(() => ({
     cancelCallback() { },
 }))
     .actions(self => ({
-    /**
-     * #action
-     */
     setCancelCallback(cancelCallback) {
         self.cancelCallback = cancelCallback;
     },
-    /**
-     * #action
-     */
     setStatusMessage(message) {
         self.statusMessage = message;
     },
-    /**
-     * #action
-     */
     setProgressPct(pct) {
         self.progressPct = pct;
     },

package/esm/JobsListWidget/model.d.ts

@@ -1,25 +1,13 @@
-import { Instance, SnapshotIn } from 'mobx-state-tree';
-import PluginManager from '@jbrowse/core/PluginManager';
 import { Job } from './jobModel';
+import type PluginManager from '@jbrowse/core/PluginManager';
+import type { Instance, SnapshotIn } from 'mobx-state-tree';
 export interface NewJob extends SnapshotIn<typeof Job> {
     cancelCallback(): void;
     setStatusMessage(msg?: string): void;
 }
-/**
- * #stateModel JobsListModel
- */
 export declare function stateModelFactory(_pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
-    /**
-     * #property
-     */
     id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    /**
-     * #property
-     */
     type: import("mobx-state-tree").ISimpleType<"JobsListWidget">;
-    /**
-     * #property
-     */
     jobs: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -31,9 +19,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    /**
-     * #property
-     */
     finished: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -45,9 +30,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    /**
-     * #property
-     */
     queued: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -59,9 +41,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    /**
-     * #property
-     */
     aborted: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -74,9 +53,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
 }, {
-    /**
-     * #action
-     */
     addJob(job: NewJob): {
         name: string;
         statusMessage: string | undefined;
@@ -98,9 +74,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    /**
-     * #action
-     */
     removeJob(jobName: string): ({
         name: string;
         statusMessage: string | undefined;
@@ -122,9 +95,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
-    /**
-     * #action
-     */
     addFinishedJob(job: NewJob): import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -146,9 +116,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    /**
-     * #action
-     */
     addQueuedJob(job: NewJob): import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -170,9 +137,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    /**
-     * #action
-     */
     addAbortedJob(job: NewJob): import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
         name: import("mobx-state-tree").ISimpleType<string>;
         statusMessage: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
@@ -194,9 +158,6 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    /**
-     * #action
-     */
     removeQueuedJob(jobName: string): ({
         name: string;
         statusMessage: string | undefined;
@@ -218,13 +179,7 @@ export declare function stateModelFactory(_pluginManager: PluginManager): import
         setStatusMessage(message?: string): void;
         setProgressPct(pct: number): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
-    /**
-     * #action
-     */
     updateJobStatusMessage(jobName: string, message?: string): void;
-    /**
-     * #action
-     */
     updateJobProgressPct(jobName: string, pct: number): void;
 }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
 export type JobsListStateModel = ReturnType<typeof stateModelFactory>;

package/esm/JobsListWidget/model.js

@@ -1,41 +1,17 @@
-import { types } from 'mobx-state-tree';
 import { ElementId } from '@jbrowse/core/util/types/mst';
+import { types } from 'mobx-state-tree';
 import { Job } from './jobModel';
-/**
- * #stateModel JobsListModel
- */
 export function stateModelFactory(_pluginManager) {
     return types
         .model('JobsListModel', {
-        /**
-         * #property
-         */
         id: ElementId,
-        /**
-         * #property
-         */
         type: types.literal('JobsListWidget'),
-        /**
-         * #property
-         */
         jobs: types.array(Job),
-        /**
-         * #property
-         */
         finished: types.array(Job),
-        /**
-         * #property
-         */
         queued: types.array(Job),
-        /**
-         * #property
-         */
         aborted: types.array(Job),
     })
         .actions(self => ({
-        /**
-         * #action
-         */
         addJob(job) {
             const { cancelCallback } = job;
             const length = self.jobs.push(job);
@@ -43,48 +19,30 @@ export function stateModelFactory(_pluginManager) {
             addedJob.setCancelCallback(cancelCallback);
             return addedJob;
         },
-        /**
-         * #action
-         */
         removeJob(jobName) {
             const indx = self.jobs.findIndex(job => job.name === jobName);
             const removed = self.jobs[indx];
             self.jobs.splice(indx, 1);
             return removed;
         },
-        /**
-         * #action
-         */
         addFinishedJob(job) {
             self.finished.push(job);
             return self.finished;
         },
-        /**
-         * #action
-         */
         addQueuedJob(job) {
             self.queued.push(job);
             return self.finished;
         },
-        /**
-         * #action
-         */
         addAbortedJob(job) {
             self.aborted.push(job);
             return self.aborted;
         },
-        /**
-         * #action
-         */
         removeQueuedJob(jobName) {
             const indx = self.queued.findIndex(job => job.name === jobName);
             const removed = self.queued[indx];
             self.queued.splice(indx, 1);
             return removed;
         },
-        /**
-         * #action
-         */
         updateJobStatusMessage(jobName, message) {
             const job = self.jobs.find(job => job.name === jobName);
             if (!job) {
@@ -92,9 +50,6 @@ export function stateModelFactory(_pluginManager) {
             }
             job.setStatusMessage(message);
         },
-        /**
-         * #action
-         */
         updateJobProgressPct(jobName, pct) {
             const job = self.jobs.find(job => job.name === jobName);
             if (!job) {

package/esm/index.d.ts

@@ -1,5 +1,5 @@
 import Plugin from '@jbrowse/core/Plugin';
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default class JobsManagementPlugin extends Plugin {
     name: string;
     install(pluginManager: PluginManager): void;

package/esm/index.js

@@ -1,7 +1,6 @@
 import Plugin from '@jbrowse/core/Plugin';
-import { isAbstractMenuManager } from '@jbrowse/core/util';
 import { Indexing } from '@jbrowse/core/ui/Icons';
-import { isSessionModelWithWidgets } from '@jbrowse/core/util';
+import { isAbstractMenuManager, isSessionModelWithWidgets, } from '@jbrowse/core/util';
 import JobsListWidgetF from './JobsListWidget';
 export default class JobsManagementPlugin extends Plugin {
     constructor() {
@@ -15,7 +14,7 @@ export default class JobsManagementPlugin extends Plugin {
         if (isAbstractMenuManager(pluginManager.rootModel)) {
             pluginManager.rootModel.appendToMenu('Tools', {
                 label: 'Jobs list',
-                icon: Indexing, // TODO: pick a better icon
+                icon: Indexing,
                 onClick: (session) => {
                     if (isSessionModelWithWidgets(session)) {
                         const { widgets } = session;

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-jobs-management",
-  "version": "2.17.0",
+  "version": "3.0.0",
   "description": "JBrowse 2 jobs management",
   "keywords": [
     "jbrowse",
@@ -36,7 +36,7 @@
     "clean": "rimraf dist esm *.tsbuildinfo"
   },
   "dependencies": {
-    "@jbrowse/text-indexing": "^2.17.0",
+    "@jbrowse/text-indexing": "^3.0.0",
     "@mui/icons-material": "^6.0.0"
   },
   "peerDependencies": {
@@ -54,5 +54,5 @@
   "publishConfig": {
     "access": "public"
   },
-  "gitHead": "eed30b5e671f8f7823652d7cecc51aa89226de46"
+  "gitHead": "2c6897f1fa732b1db5b094d1dca197e333e95319"
 }