@jbrowse/plugin-gtf 3.0.5 → 3.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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@@ -5,11 +5,27 @@ function x() { }
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const GtfAdapter = (0, configuration_1.ConfigurationSchema)('GtfAdapter', {
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gtfLocation: {
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type: 'fileLocation',
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defaultValue: {
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8
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defaultValue: {
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uri: '/path/to/my.gtf',
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locationType: 'UriLocation',
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},
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},
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aggregateField: {
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type: 'string',
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defaultValue: 'gene_name',
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},
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}, {
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}, {
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explicitlyTyped: true,
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preProcessSnapshot: snap => {
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return snap.uri
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? {
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...snap,
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gtfLocation: {
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uri: snap.uri,
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baseUri: snap.baseUri,
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},
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}
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: snap;
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},
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});
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exports.default = GtfAdapter;
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@@ -3,11 +3,27 @@ function x() { }
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const GtfAdapter = ConfigurationSchema('GtfAdapter', {
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gtfLocation: {
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type: 'fileLocation',
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defaultValue: {
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6
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defaultValue: {
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uri: '/path/to/my.gtf',
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locationType: 'UriLocation',
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},
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},
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aggregateField: {
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type: 'string',
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defaultValue: 'gene_name',
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},
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}, {
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}, {
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explicitlyTyped: true,
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preProcessSnapshot: snap => {
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return snap.uri
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? {
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...snap,
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gtfLocation: {
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uri: snap.uri,
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baseUri: snap.baseUri,
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},
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}
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: snap;
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},
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});
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export default GtfAdapter;
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package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@jbrowse/plugin-gtf",
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"version": "3.0
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"version": "3.1.0",
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"description": "JBrowse 2 gtf feature adapter",
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"keywords": [
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"jbrowse",
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@@ -38,8 +38,8 @@
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"dependencies": {
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"@flatten-js/interval-tree": "^1.0.15",
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"@gmod/bgzf-filehandle": "^2.0.1",
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"@jbrowse/core": "^3.0
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"@jbrowse/plugin-linear-genome-view": "^3.0
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"@jbrowse/core": "^3.1.0",
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"@jbrowse/plugin-linear-genome-view": "^3.1.0",
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"@mui/material": "^6.0.0",
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"gtf-nostream": "^1.0.0",
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"mobx": "^6.0.0",
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@@ -56,5 +56,5 @@
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"distModule": "esm/index.js",
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"srcModule": "src/index.ts",
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"module": "esm/index.js",
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"gitHead": "
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"gitHead": "91492049ddea0aed90eb24d3c066c2d9f5a6b189"
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}
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