@jbrowse/plugin-grid-bookmark 3.6.5 → 4.0.0

package/esm/GridBookmarkWidget/model.d.ts

@@ -1,23 +1,23 @@
 import type PluginManager from '@jbrowse/core/PluginManager';
 import type { Region } from '@jbrowse/core/util/types';
+import type { IMSTArray, Instance, SnapshotIn } from '@jbrowse/mobx-state-tree';
 import type { LinearGenomeViewModel } from '@jbrowse/plugin-linear-genome-view';
-import type { IMSTArray, Instance, SnapshotIn } from 'mobx-state-tree';
-declare const LabeledRegionModel: import("mobx-state-tree").IModelType<{
-    refName: import("mobx-state-tree").ISimpleType<string>;
-    start: import("mobx-state-tree").ISimpleType<number>;
-    end: import("mobx-state-tree").ISimpleType<number>;
-    reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+declare const LabeledRegionModel: import("@jbrowse/mobx-state-tree").IModelType<{
+    refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+    start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+    end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+    reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
 } & {
-    assemblyName: import("mobx-state-tree").ISimpleType<string>;
+    assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
 } & {
-    label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+    label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+    highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
 }, {
     setRefName(newRefName: string): void;
 } & {
     setLabel(label: string): void;
     setHighlight(color: string): void;
-}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
+}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>;
 export interface IExtendedLGV extends LinearGenomeViewModel {
     bookmarkHighlightsVisible: boolean;
     bookmarkLabelsVisible: boolean;
@@ -40,25 +40,25 @@ export interface IExtendedLabeledRegionModel extends ILabeledRegionModel {
     id: number;
     correspondingObj: ILabeledRegionModel;
 }
-export default function f(_pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
-    id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    type: import("mobx-state-tree").ISimpleType<"GridBookmarkWidget">;
-    bookmarks: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-        refName: import("mobx-state-tree").ISimpleType<string>;
-        start: import("mobx-state-tree").ISimpleType<number>;
-        end: import("mobx-state-tree").ISimpleType<number>;
-        reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+export default function f(_pluginManager: PluginManager): import("@jbrowse/mobx-state-tree").IModelType<{
+    id: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+    type: import("@jbrowse/mobx-state-tree").ISimpleType<"GridBookmarkWidget">;
+    bookmarks: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").IModelType<{
+        refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+        start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+        end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+        reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
     } & {
-        assemblyName: import("mobx-state-tree").ISimpleType<string>;
+        assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
     } & {
-        label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-        highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+        label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+        highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
     }, {
         setRefName(newRefName: string): void;
     } & {
         setLabel(label: string): void;
         setHighlight(color: string): void;
-    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>, [undefined]>;
+    }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>, [undefined]>;
 }, {
     selectedBookmarks: IExtendedLabeledRegionModel[];
     selectedAssembliesPre: string[] | undefined;
@@ -76,128 +76,128 @@ export default function f(_pluginManager: PluginManager): import("mobx-state-tre
         assemblyName: string;
         label: string;
         highlight: string;
-    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
+    } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & {
         setRefName(newRefName: string): void;
     } & {
         setLabel(label: string): void;
         setHighlight(color: string): void;
-    } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-        refName: import("mobx-state-tree").ISimpleType<string>;
-        start: import("mobx-state-tree").ISimpleType<number>;
-        end: import("mobx-state-tree").ISimpleType<number>;
-        reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+    } & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+        refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+        start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+        end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+        reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
     } & {
-        assemblyName: import("mobx-state-tree").ISimpleType<string>;
+        assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
     } & {
-        label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-        highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+        label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+        highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
     }, {
         setRefName(newRefName: string): void;
     } & {
         setLabel(label: string): void;
         setHighlight(color: string): void;
-    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>)[];
+    }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>)[];
 } & {
     readonly sharedBookmarksModel: {
-        sharedBookmarks: (IMSTArray<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+        sharedBookmarks: (IMSTArray<import("@jbrowse/mobx-state-tree").IModelType<{
+            refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
         } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
+            assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
         } & {
-            label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+            label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
         }, {
             setRefName(newRefName: string): void;
         } & {
             setLabel(label: string): void;
             setHighlight(color: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IMaybe<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").IModelType<{
+            refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
         } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
+            assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
         } & {
-            label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+            label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
         }, {
             setRefName(newRefName: string): void;
         } & {
             setLabel(label: string): void;
             setHighlight(color: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>>) | undefined;
-    } & import("mobx-state-tree/dist/internal").NonEmptyObject & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-        sharedBookmarks: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-        } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
-        } & {
-            label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>>) | undefined;
+    } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+        sharedBookmarks: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").IModelType<{
+            refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+        } & {
+            assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+        } & {
+            label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
         }, {
             setRefName(newRefName: string): void;
         } & {
             setLabel(label: string): void;
             setHighlight(color: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
+    }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
     readonly allBookmarksModel: {
-        sharedBookmarks: (IMSTArray<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+        sharedBookmarks: (IMSTArray<import("@jbrowse/mobx-state-tree").IModelType<{
+            refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
         } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
+            assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
         } & {
-            label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+            label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
         }, {
             setRefName(newRefName: string): void;
         } & {
             setLabel(label: string): void;
             setHighlight(color: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IMaybe<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>> & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").IModelType<{
+            refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
         } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
+            assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
         } & {
-            label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+            label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
         }, {
             setRefName(newRefName: string): void;
         } & {
             setLabel(label: string): void;
             setHighlight(color: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>>) | undefined;
-    } & import("mobx-state-tree/dist/internal").NonEmptyObject & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-        sharedBookmarks: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-        } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
-        } & {
-            label: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-            highlight: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>>) | undefined;
+    } & import("@jbrowse/mobx-state-tree/dist/internal").NonEmptyObject & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
+        sharedBookmarks: import("@jbrowse/mobx-state-tree").IMaybe<import("@jbrowse/mobx-state-tree").IArrayType<import("@jbrowse/mobx-state-tree").IModelType<{
+            refName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+            start: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            end: import("@jbrowse/mobx-state-tree").ISimpleType<number>;
+            reversed: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<boolean>, [undefined]>;
+        } & {
+            assemblyName: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
+        } & {
+            label: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
+            highlight: import("@jbrowse/mobx-state-tree").IOptionalIType<import("@jbrowse/mobx-state-tree").ISimpleType<string>, [undefined]>;
         }, {
             setRefName(newRefName: string): void;
         } & {
             setLabel(label: string): void;
             setHighlight(color: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+        }, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>>;
+    }, {}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
 } & {
     setSelectedAssemblies(assemblies?: string[]): void;
 } & {
@@ -219,9 +219,9 @@ export default function f(_pluginManager: PluginManager): import("mobx-state-tre
     removeBookmarkObject(arg: Instance<typeof LabeledRegionModel>): void;
 } & {
     afterAttach(): void;
-}, import("mobx-state-tree")._NotCustomized, {
-    type: "GridBookmarkWidget";
+}, import("@jbrowse/mobx-state-tree")._NotCustomized, {
     id: string;
+    type: "GridBookmarkWidget";
 }>;
 export type GridBookmarkStateModel = ReturnType<typeof f>;
 export type GridBookmarkModel = Instance<GridBookmarkStateModel>;

package/esm/GridBookmarkWidget/model.js

@@ -1,7 +1,7 @@
 import { getSession, localStorageGetItem, localStorageSetItem, } from '@jbrowse/core/util';
 import { ElementId, Region as RegionModel } from '@jbrowse/core/util/types/mst';
+import { addDisposer, cast, types } from '@jbrowse/mobx-state-tree';
 import { autorun } from 'mobx';
-import { addDisposer, cast, types } from 'mobx-state-tree';
 const LabeledRegionModel = types
     .compose(RegionModel, types.model('Label', {
     label: types.optional(types.string, ''),
@@ -73,8 +73,7 @@ export default function f(_pluginManager) {
     }))
         .views(self => ({
         get selectedAssemblies() {
-            var _a, _b;
-            return ((_b = (_a = self.selectedAssembliesPre) === null || _a === void 0 ? void 0 : _a.filter(f => self.validAssemblies.has(f))) !== null && _b !== void 0 ? _b : [...self.validAssemblies]);
+            return (self.selectedAssembliesPre?.filter(f => self.validAssemblies.has(f)) ?? [...self.validAssemblies]);
         },
     }))
         .actions(self => ({
@@ -105,24 +104,20 @@ export default function f(_pluginManager) {
             self.bookmarks = cast(regions);
         },
         setBookmarkHighlightsVisible(arg) {
-            var _a, _b;
             const { views } = getSession(self);
             for (const view of views) {
-                (_a = view.setBookmarkHighlightsVisible) === null || _a === void 0 ? void 0 : _a.call(view, arg);
-                (_b = view.views) === null || _b === void 0 ? void 0 : _b.map(view => {
-                    var _a;
-                    (_a = view.setBookmarkHighlightsVisible) === null || _a === void 0 ? void 0 : _a.call(view, arg);
+                view.setBookmarkHighlightsVisible?.(arg);
+                view.views?.map(view => {
+                    view.setBookmarkHighlightsVisible?.(arg);
                 });
             }
         },
         setBookmarkLabelsVisible(arg) {
-            var _a, _b;
             const { views } = getSession(self);
             for (const view of views) {
-                (_a = view.setBookmarkLabelsVisible) === null || _a === void 0 ? void 0 : _a.call(view, arg);
-                (_b = view.views) === null || _b === void 0 ? void 0 : _b.map(view => {
-                    var _a;
-                    (_a = view.setBookmarkHighlightsVisible) === null || _a === void 0 ? void 0 : _a.call(view, arg);
+                view.setBookmarkLabelsVisible?.(arg);
+                view.views?.map(view => {
+                    view.setBookmarkHighlightsVisible?.(arg);
                 });
             }
         },
@@ -154,9 +149,9 @@ export default function f(_pluginManager) {
             addDisposer(self, () => {
                 window.removeEventListener('storage', handler);
             });
-            addDisposer(self, autorun(() => {
+            addDisposer(self, autorun(function bookmarkLocalStorageAutorun() {
                 localStorageSetItem(key, JSON.stringify(self.bookmarks));
-            }));
+            }, { name: 'BookmarkLocalStorage' }));
         },
     }))
         .postProcessSnapshot(snap => {

package/esm/GridBookmarkWidget/sessionSharing.js

@@ -1,4 +1,4 @@
-import { toUrlSafeB64 } from './utils';
+import { toUrlSafeB64 } from "./utils.js";
 function generateUID(length) {
     return window
         .btoa([...window.crypto.getRandomValues(new Uint8Array(length * 2))]

package/esm/GridBookmarkWidget/utils.d.ts

@@ -1,7 +1,7 @@
-import type { GridBookmarkModel } from './model';
+import type { GridBookmarkModel } from './model.ts';
 import type { AbstractViewModel } from '@jbrowse/core/util/types';
 export declare function navToBookmark(locString: string, assembly: string, views: AbstractViewModel[], model: GridBookmarkModel): Promise<void>;
-export declare function downloadBookmarkFile(fileFormat: string, model: GridBookmarkModel): void;
+export declare function downloadBookmarkFile(fileFormat: string, model: GridBookmarkModel): Promise<void>;
 export declare function b64PadSuffix(b64: string): string;
 export declare function fromUrlSafeB64(b64: string): Promise<string>;
 export declare function toUrlSafeB64(str: string): Promise<string>;

package/esm/GridBookmarkWidget/utils.js

@@ -1,10 +1,9 @@
 import { assembleLocString, getSession } from '@jbrowse/core/util';
-import { saveAs } from 'file-saver';
 export async function navToBookmark(locString, assembly, views, model) {
     const session = getSession(model);
     try {
         let view = views.find(view => view.id === session.focusedViewId);
-        if ((view === null || view === void 0 ? void 0 : view.assemblyNames[0]) !== assembly) {
+        if (view?.assemblyNames[0] !== assembly) {
             view = views.find(elt => elt.type === 'LinearGenomeView' && elt.assemblyNames[0] === assembly);
         }
         if (!view) {
@@ -20,11 +19,12 @@ export async function navToBookmark(locString, assembly, views, model) {
         session.notifyError(`${e}`, e);
     }
 }
-export function downloadBookmarkFile(fileFormat, model) {
+export async function downloadBookmarkFile(fileFormat, model) {
     const { selectedBookmarks, bookmarksWithValidAssemblies } = model;
     const bookmarksToDownload = selectedBookmarks.length === 0
         ? bookmarksWithValidAssemblies
         : selectedBookmarks;
+    const { saveAs } = await import('file-saver-es');
     if (fileFormat === 'BED') {
         const fileHeader = '';
         const fileContents = {};
@@ -41,11 +41,9 @@ export function downloadBookmarkFile(fileFormat, model) {
         }
         for (const assembly in fileContents) {
             const fileContent = fileContents[assembly].reduce((a, b) => a + b, fileHeader);
-            const blob = new Blob([fileContent || ''], {
+            saveAs(new Blob([fileContent || ''], {
                 type: 'text/x-bed;charset=utf-8',
-            });
-            const fileName = `jbrowse_bookmarks_${assembly}.bed`;
-            saveAs(blob, fileName);
+            }), `jbrowse_bookmarks_${assembly}.bed`);
         }
     }
     else {
@@ -58,11 +56,9 @@ export function downloadBookmarkFile(fileFormat, model) {
             return `${bookmark.refName}\t${bookmark.start + 1}\t${bookmark.end}\t${labelVal}\t${bookmark.assemblyName}\t${locString}\n`;
         })
             .reduce((a, b) => a + b, fileHeader);
-        const blob = new Blob([fileContents || ''], {
+        saveAs(new Blob([fileContents || ''], {
             type: 'text/tab-separated-values;charset=utf-8',
-        });
-        const fileName = 'jbrowse_bookmarks.tsv';
-        saveAs(blob, fileName);
+        }), 'jbrowse_bookmarks.tsv');
     }
 }
 export function b64PadSuffix(b64) {
@@ -86,16 +82,16 @@ export function b64PadSuffix(b64) {
 export async function fromUrlSafeB64(b64) {
     const originalB64 = b64PadSuffix(b64.replaceAll('-', '+').replaceAll('_', '/'));
     const { toByteArray } = await import('base64-js');
-    const { inflate } = await import('pako');
+    const { inflate } = await import('pako-esm2');
     const bytes = toByteArray(originalB64);
-    const inflated = inflate(bytes);
+    const inflated = inflate(bytes, undefined);
     return new TextDecoder().decode(inflated);
 }
 export async function toUrlSafeB64(str) {
     const bytes = new TextEncoder().encode(str);
-    const { deflate } = await import('pako');
+    const { deflate } = await import('pako-esm2');
     const { fromByteArray } = await import('base64-js');
-    const deflated = deflate(bytes);
+    const deflated = deflate(bytes, undefined);
     const encoded = fromByteArray(deflated);
     const pos = encoded.indexOf('=');
     return pos > 0

package/esm/index.js

@@ -4,12 +4,9 @@ import BookmarkIcon from '@mui/icons-material/Bookmark';
 import BookmarksIcon from '@mui/icons-material/Bookmarks';
 import HighlightIcon from '@mui/icons-material/Highlight';
 import LabelIcon from '@mui/icons-material/Label';
-import GridBookmarkWidgetF from './GridBookmarkWidget';
+import GridBookmarkWidgetF from "./GridBookmarkWidget/index.js";
 export default class GridBookmarkPlugin extends Plugin {
-    constructor() {
-        super(...arguments);
-        this.name = 'GridBookmarkPlugin';
-    }
+    name = 'GridBookmarkPlugin';
     install(pluginManager) {
         GridBookmarkWidgetF(pluginManager);
         pluginManager.addToExtensionPoint('Core-extendPluggableElement', (pluggableElement) => {
@@ -72,7 +69,6 @@ export default class GridBookmarkPlugin extends Plugin {
                         menuItems() {
                             return [
                                 ...superMenuItems(),
-                                { type: 'divider' },
                                 {
                                     label: 'Bookmarks',
                                     icon: BookmarksIcon,
@@ -155,6 +151,21 @@ export default class GridBookmarkPlugin extends Plugin {
                             document.removeEventListener('keydown', keydownListener);
                         },
                     };
+                })
+                    .postProcessSnapshot(snap => {
+                    if (!snap) {
+                        return snap;
+                    }
+                    const { bookmarkHighlightsVisible, bookmarkLabelsVisible, ...rest } = snap;
+                    return {
+                        ...rest,
+                        ...(bookmarkHighlightsVisible === false
+                            ? { bookmarkHighlightsVisible }
+                            : {}),
+                        ...(bookmarkLabelsVisible === false
+                            ? { bookmarkLabelsVisible }
+                            : {}),
+                    };
                 });
                 pluggableElement.stateModel = newStateModel;
             }

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-grid-bookmark",
-  "version": "3.6.5",
+  "version": "4.0.0",
   "description": "JBrowse 2 grid bookmark widget",
   "keywords": [
     "jbrowse",
@@ -15,40 +15,25 @@
     "directory": "plugins/grid-bookmark"
   },
   "author": "JBrowse Team",
-  "distMain": "dist/index.js",
-  "srcMain": "src/index.ts",
-  "main": "dist/index.js",
+  "main": "esm/index.js",
   "files": [
-    "dist",
     "esm"
   ],
-  "scripts": {
-    "build": "npm-run-all build:*",
-    "test": "cd ../..; jest --passWithNoTests plugins/grid-bookmark",
-    "prepublishOnly": "yarn test",
-    "prepack": "yarn build && yarn useDist",
-    "postpack": "yarn useSrc",
-    "useDist": "node ../../scripts/useDist.js",
-    "useSrc": "node ../../scripts/useSrc.js",
-    "prebuild": "npm run clean",
-    "build:esm": "tsc --build tsconfig.build.esm.json",
-    "build:commonjs": "tsc --build tsconfig.build.commonjs.json",
-    "clean": "rimraf dist esm *.tsbuildinfo"
-  },
   "dependencies": {
-    "@jbrowse/core": "^3.6.5",
-    "@jbrowse/plugin-config": "^3.6.5",
-    "@jbrowse/plugin-linear-genome-view": "^3.6.5",
-    "@mui/icons-material": "^7.0.0",
-    "@mui/material": "^7.0.0",
-    "@mui/x-data-grid": "^8.0.0",
-    "@types/file-saver": "^2.0.1",
-    "copy-to-clipboard": "^3.3.1",
-    "file-saver": "^2.0.0",
-    "mobx": "^6.0.0",
-    "mobx-react": "^9.0.0",
-    "mobx-state-tree": "^5.0.0",
-    "tss-react": "^4.0.0"
+    "@jbrowse/mobx-state-tree": "^5.5.0",
+    "@mui/icons-material": "^7.3.6",
+    "@mui/material": "^7.3.6",
+    "@mui/x-data-grid": "^8.23.0",
+    "@types/file-saver-es": "^2.0.3",
+    "base64-js": "^1.5.1",
+    "copy-to-clipboard": "^3.3.3",
+    "crypto-js": "^4.2.0",
+    "file-saver-es": "^2.0.5",
+    "mobx": "^6.15.0",
+    "mobx-react": "^9.2.1",
+    "pako-esm2": "^2.0.2",
+    "@jbrowse/plugin-linear-genome-view": "^4.0.0",
+    "@jbrowse/core": "^4.0.0"
   },
   "peerDependencies": {
     "react": ">=18.0.0"
@@ -56,8 +41,19 @@
   "publishConfig": {
     "access": "public"
   },
-  "distModule": "esm/index.js",
-  "srcModule": "src/index.ts",
-  "module": "esm/index.js",
-  "gitHead": "354d0a87b757b4d84f824b47507662f6f3a1693f"
-}
+  "sideEffects": false,
+  "scripts": {
+    "build": "pnpm run /^build:/",
+    "test": "cd ../..; jest --passWithNoTests plugins/grid-bookmark",
+    "prebuild": "pnpm clean",
+    "build:esm": "tsc -p tsconfig.build.esm.json",
+    "clean": "rimraf esm *.tsbuildinfo"
+  },
+  "types": "esm/index.d.ts",
+  "exports": {
+    ".": {
+      "types": "./esm/index.d.ts",
+      "import": "./esm/index.js"
+    }
+  }
+}

package/dist/GridBookmarkWidget/components/AssemblySelector.d.ts

@@ -1,5 +0,0 @@
-import type { GridBookmarkModel } from '../model';
-declare const AssemblySelector: ({ model, }: {
-    model: GridBookmarkModel;
-}) => import("react/jsx-runtime").JSX.Element;
-export default AssemblySelector;

package/dist/GridBookmarkWidget/components/AssemblySelector.js

@@ -1,22 +0,0 @@
-"use strict";
-Object.defineProperty(exports, "__esModule", { value: true });
-const jsx_runtime_1 = require("react/jsx-runtime");
-const material_1 = require("@mui/material");
-const mobx_react_1 = require("mobx-react");
-const AssemblySelector = (0, mobx_react_1.observer)(function ({ model, }) {
-    const { validAssemblies, selectedAssemblies } = model;
-    const noAssemblies = validAssemblies.size === 0;
-    const label = 'Select assemblies';
-    const id = 'select-assemblies-label';
-    const selectedSet = new Set(selectedAssemblies);
-    const isAllSelected = [...validAssemblies].every(e => selectedSet.has(e));
-    return ((0, jsx_runtime_1.jsxs)(material_1.FormControl, { disabled: noAssemblies, fullWidth: true, children: [(0, jsx_runtime_1.jsx)(material_1.InputLabel, { id: id, children: label }), (0, jsx_runtime_1.jsxs)(material_1.Select, { labelId: id, multiple: true, value: selectedAssemblies, onChange: event => {
-                    model.setSelectedAssemblies(typeof event.target.value === 'string'
-                        ? [event.target.value]
-                        : event.target.value);
-                }, input: (0, jsx_runtime_1.jsx)(material_1.OutlinedInput, { label: label }), renderValue: selected => selected.join(', '), children: [(0, jsx_runtime_1.jsxs)(material_1.MenuItem, { onClickCapture: event => {
-                            model.setSelectedAssemblies(isAllSelected ? [] : undefined);
-                            event.preventDefault();
-                        }, children: [(0, jsx_runtime_1.jsx)(material_1.Checkbox, { checked: isAllSelected, indeterminate: !isAllSelected && selectedAssemblies.length > 0 }), (0, jsx_runtime_1.jsx)(material_1.ListItemText, { primary: "Select all" })] }), [...validAssemblies].map(name => ((0, jsx_runtime_1.jsxs)(material_1.MenuItem, { value: name, children: [(0, jsx_runtime_1.jsx)(material_1.Checkbox, { checked: selectedAssemblies.includes(name) }), (0, jsx_runtime_1.jsx)(material_1.ListItemText, { primary: name })] }, name)))] })] }));
-});
-exports.default = AssemblySelector;

package/dist/GridBookmarkWidget/components/BookmarkGrid.d.ts

@@ -1,5 +0,0 @@
-import type { GridBookmarkModel } from '../model';
-declare const BookmarkGrid: ({ model, }: {
-    model: GridBookmarkModel;
-}) => import("react/jsx-runtime").JSX.Element;
-export default BookmarkGrid;