@jbrowse/plugin-grid-bookmark 2.4.0 → 2.4.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/GridBookmarkWidget/model.js +1 -1
- package/dist/GridBookmarkWidget/model.js.map +1 -1
- package/dist/GridBookmarkWidget/utils.js +4 -8
- package/dist/GridBookmarkWidget/utils.js.map +1 -1
- package/dist/index.js +5 -5
- package/dist/index.js.map +1 -1
- package/esm/GridBookmarkWidget/model.js +1 -1
- package/esm/GridBookmarkWidget/model.js.map +1 -1
- package/esm/GridBookmarkWidget/utils.js +4 -8
- package/esm/GridBookmarkWidget/utils.js.map +1 -1
- package/esm/index.js +5 -5
- package/esm/index.js.map +1 -1
- package/package.json +2 -2
- package/src/GridBookmarkWidget/model.ts +1 -1
- package/src/GridBookmarkWidget/utils.ts +5 -7
- package/src/index.ts +5 -5
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@@ -20,7 +20,7 @@ function f(pluginManager) {
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})
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.actions(self => ({
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importBookmarks(regions) {
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-
self.bookmarkedRegions = (0, mobx_state_tree_1.cast)(self.bookmarkedRegions
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+
self.bookmarkedRegions = (0, mobx_state_tree_1.cast)([...self.bookmarkedRegions, ...regions]);
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},
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addBookmark(region) {
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self.bookmarkedRegions.push(region);
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/model.ts"],"names":[],"mappings":";;AAAA,qDAAuD;AAGvD,sDAA+E;AAE/E,MAAM,kBAAkB,GAAG,uBAAK;KAC7B,OAAO,CACN,YAAW,EACX,uBAAK,CAAC,KAAK,CAAC,OAAO,EAAE,EAAE,KAAK,EAAE,uBAAK,CAAC,QAAQ,CAAC,uBAAK,CAAC,MAAM,EAAE,EAAE,CAAC,EAAE,CAAC,CAClE;KACA,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,QAAQ,CAAC,KAAa;QACpB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;IACpB,CAAC;CACF,CAAC,CAAC,CAAA;AAEL,SAAwB,CAAC,CAAC,aAA4B;IACpD,OAAO,uBAAK;SACT,KAAK,CAAC,mBAAmB,EAAE;QAC1B,EAAE,EAAE,eAAS;QACb,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,oBAAoB,CAAC;QACzC,IAAI,EAAE,uBAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;QACD,iBAAiB,EAAE,uBAAK,CAAC,KAAK,CAAC,kBAAkB,CAAC;QAClD,qBAAqB,EAAE,EAAE;KAC1B,CAAC;SACD,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB,eAAe,CAAC,OAAiB;YAC/B,IAAI,CAAC,iBAAiB,GAAG,IAAA,sBAAI,EAAC,IAAI,CAAC,iBAAiB,
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1
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+
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/model.ts"],"names":[],"mappings":";;AAAA,qDAAuD;AAGvD,sDAA+E;AAE/E,MAAM,kBAAkB,GAAG,uBAAK;KAC7B,OAAO,CACN,YAAW,EACX,uBAAK,CAAC,KAAK,CAAC,OAAO,EAAE,EAAE,KAAK,EAAE,uBAAK,CAAC,QAAQ,CAAC,uBAAK,CAAC,MAAM,EAAE,EAAE,CAAC,EAAE,CAAC,CAClE;KACA,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,QAAQ,CAAC,KAAa;QACpB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;IACpB,CAAC;CACF,CAAC,CAAC,CAAA;AAEL,SAAwB,CAAC,CAAC,aAA4B;IACpD,OAAO,uBAAK;SACT,KAAK,CAAC,mBAAmB,EAAE;QAC1B,EAAE,EAAE,eAAS;QACb,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,oBAAoB,CAAC;QACzC,IAAI,EAAE,uBAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;QACD,iBAAiB,EAAE,uBAAK,CAAC,KAAK,CAAC,kBAAkB,CAAC;QAClD,qBAAqB,EAAE,EAAE;KAC1B,CAAC;SACD,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB,eAAe,CAAC,OAAiB;YAC/B,IAAI,CAAC,iBAAiB,GAAG,IAAA,sBAAI,EAAC,CAAC,GAAG,IAAI,CAAC,iBAAiB,EAAE,GAAG,OAAO,CAAC,CAAC,CAAA;QACxE,CAAC;QACD,WAAW,CAAC,MAAc;YACxB,IAAI,CAAC,iBAAiB,CAAC,IAAI,CAAC,MAAM,CAAC,CAAA;QACrC,CAAC;QACD,cAAc,CAAC,KAAa;YAC1B,IAAI,CAAC,iBAAiB,CAAC,MAAM,CAAC,KAAK,EAAE,CAAC,CAAC,CAAA;QACzC,CAAC;QACD,iBAAiB;YACf,IAAI,CAAC,iBAAiB,CAAC,KAAK,EAAE,CAAA;QAChC,CAAC;QACD,mBAAmB,CAAC,KAAa,EAAE,KAAa;;YAC9C,MAAA,IAAI,CAAC,iBAAiB,CAAC,KAAK,CAAC,0CAAE,QAAQ,CAAC,KAAK,CAAC,CAAA;QAChD,CAAC;QACD,mBAAmB,CAAC,QAAgB;YAClC,IAAI,CAAC,qBAAqB,GAAG,QAAQ,CAAA;QACvC,CAAC;KACF,CAAC,CAAC;SACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACd,IAAI,gBAAgB;YAClB,OAAO,CACL,IAAI,CAAC,qBAAqB;gBAC1B,CAAC,IAAI,CAAC,iBAAiB,CAAC,MAAM;oBAC5B,CAAC,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC,CAAC,CAAC,YAAY;oBACxC,CAAC,CAAC,EAAE,CAAC,CACR,CAAA;QACH,CAAC;QACD,IAAI,UAAU;YACZ,OAAO;gBACL,GAAG,IAAI,GAAG,CAAC,IAAI,CAAC,iBAAiB,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;aACtE,CAAA;QACH,CAAC;KACF,CAAC,CAAC,CAAA;AACP,CAAC;AA9CD,oBA8CC"}
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@@ -12,7 +12,7 @@ async function navToBookmark(locString, views, model) {
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const newViewId = `${model.id}_${selectedAssembly}`;
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let view = (views.find(v => v.type === 'LinearGenomeView' && v.id === newViewId) ||
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views.find(v => v.type === 'LinearGenomeView' &&
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-
// @ts-
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+
// @ts-expect-error
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v.assemblyNames[0] === selectedAssembly));
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if (!view) {
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view = session.addView('LinearGenomeView', {
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@@ -53,13 +53,9 @@ function downloadBookmarkFile(bookmarkedRegions, fileFormat, model) {
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? 'text/x-bed;charset=utf-8'
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: 'text/tab-separated-values;charset=utf-8',
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});
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}
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else {
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fileName = 'jbrowse_bookmarks.tsv';
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}
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const fileName = fileFormat === 'BED'
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? `jbrowse_bookmarks_${selectedAssembly}.bed`
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: 'jbrowse_bookmarks.tsv';
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(0, file_saver_1.saveAs)(blob, fileName);
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}
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exports.downloadBookmarkFile = downloadBookmarkFile;
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@@ -1 +1 @@
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1
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-
{"version":3,"file":"utils.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/utils.ts"],"names":[],"mappings":";;;AAAA,2CAAmC;AACnC,6CAAkE;AAY3D,KAAK,UAAU,aAAa,CACjC,SAAiB,EACjB,KAA0B,EAC1B,KAAwB;IAExB,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IACjC,IAAI;QACF,0EAA0E;QAC1E,iEAAiE;QACjE,MAAM,EAAE,gBAAgB,EAAE,GAAG,KAAK,CAAA;QAClC,MAAM,SAAS,GAAG,GAAG,KAAK,CAAC,EAAE,IAAI,gBAAgB,EAAE,CAAA;QACnD,IAAI,IAAI,GAAG,CAAC,KAAK,CAAC,IAAI,CACpB,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,kBAAkB,IAAI,CAAC,CAAC,EAAE,KAAK,SAAS,CACzD;YACC,KAAK,CAAC,IAAI,CACR,CAAC,CAAC,EAAE,CACF,CAAC,CAAC,IAAI,KAAK,kBAAkB;gBAC7B,
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{"version":3,"file":"utils.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/utils.ts"],"names":[],"mappings":";;;AAAA,2CAAmC;AACnC,6CAAkE;AAY3D,KAAK,UAAU,aAAa,CACjC,SAAiB,EACjB,KAA0B,EAC1B,KAAwB;IAExB,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IACjC,IAAI;QACF,0EAA0E;QAC1E,iEAAiE;QACjE,MAAM,EAAE,gBAAgB,EAAE,GAAG,KAAK,CAAA;QAClC,MAAM,SAAS,GAAG,GAAG,KAAK,CAAC,EAAE,IAAI,gBAAgB,EAAE,CAAA;QACnD,IAAI,IAAI,GAAG,CAAC,KAAK,CAAC,IAAI,CACpB,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,kBAAkB,IAAI,CAAC,CAAC,EAAE,KAAK,SAAS,CACzD;YACC,KAAK,CAAC,IAAI,CACR,CAAC,CAAC,EAAE,CACF,CAAC,CAAC,IAAI,KAAK,kBAAkB;gBAC7B,mBAAmB;gBACnB,CAAC,CAAC,aAAa,CAAC,CAAC,CAAC,KAAK,gBAAgB,CAC1C,CAAa,CAAA;QAEhB,IAAI,CAAC,IAAI,EAAE;YACT,IAAI,GAAG,OAAO,CAAC,OAAO,CAAC,kBAAkB,EAAE;gBACzC,EAAE,EAAE,SAAS;aACd,CAAQ,CAAA;SACV;QACD,MAAM,IAAI,CAAC,cAAc,CAAC,SAAS,EAAE,gBAAgB,CAAC,CAAA;KACvD;IAAC,OAAO,CAAC,EAAE;QACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;QAChB,OAAO,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,EAAE,OAAO,CAAC,CAAA;KAChC;AACH,CAAC;AA/BD,sCA+BC;AAED,SAAgB,oBAAoB,CAClC,iBAAkC,EAClC,UAAkB,EAClB,KAAwB;IAExB,MAAM,EAAE,gBAAgB,EAAE,GAAG,KAAK,CAAA;IAClC,MAAM,UAAU,GACd,UAAU,KAAK,KAAK;QAClB,CAAC,CAAC,wDAAwD;QAC1D,CAAC,CAAC,EAAE,CAAA;IAER,MAAM,YAAY,GAAG,iBAAiB;SACnC,GAAG,CAAC,CAAC,CAAC,EAAE;QACP,MAAM,EAAE,KAAK,EAAE,GAAG,CAAC,CAAA;QACnB,MAAM,QAAQ,GAAG,KAAK,KAAK,EAAE,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAA;QAC3C,MAAM,SAAS,GAAG,IAAA,wBAAiB,EAAC,CAAC,CAAC,CAAA;QAEtC,IAAI,UAAU,KAAK,KAAK,EAAE;YACxB,IAAI,CAAC,CAAC,YAAY,KAAK,gBAAgB,IAAI,gBAAgB,KAAK,KAAK,EAAE;gBACrE,OAAO,GAAG,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC,KAAK,KAAK,CAAC,CAAC,GAAG,KAAK,QAAQ,IAAI,CAAA;aAC3D;YACD,OAAO,EAAE,CAAA;SACV;aAAM;YACL,OAAO,GAAG,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC,KAAK,GAAG,CAAC,KAAK,CAAC,CAAC,GAAG,KAAK,QAAQ,KACxD,CAAC,CAAC,YACJ,KAAK,SAAS,IAAI,CAAA;SACnB;IACH,CAAC,CAAC;SACD,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,EAAE,UAAU,CAAC,CAAA;IAEtC,MAAM,IAAI,GAAG,IAAI,IAAI,CAAC,CAAC,YAAY,IAAI,EAAE,CAAC,EAAE;QAC1C,IAAI,EACF,UAAU,KAAK,KAAK;YAClB,CAAC,CAAC,0BAA0B;YAC5B,CAAC,CAAC,yCAAyC;KAChD,CAAC,CAAA;IAEF,MAAM,QAAQ,GACZ,UAAU,KAAK,KAAK;QAClB,CAAC,CAAC,qBAAqB,gBAAgB,MAAM;QAC7C,CAAC,CAAC,uBAAuB,CAAA;IAE7B,IAAA,mBAAM,EAAC,IAAI,EAAE,QAAQ,CAAC,CAAA;AACxB,CAAC;AA3CD,oDA2CC"}
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package/dist/index.js
CHANGED
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@@ -47,7 +47,7 @@ class default_1 extends Plugin_1.default {
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this.activateBookmarkWidget();
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bookmarkWidget = widgets.get('GridBookmark');
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}
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// @ts-
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// @ts-expect-error
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bookmarkWidget.addBookmark(firstRegion);
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}
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},
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{
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label: 'Open bookmark widget',
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icon: Bookmarks_1.default,
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// @ts-
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// @ts-expect-error
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onClick: self.activateBookmarkWidget,
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},
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{
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label: 'Bookmark current region',
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icon: Bookmark_1.default,
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// @ts-
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// @ts-expect-error
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onClick: self.bookmarkCurrentRegion,
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},
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];
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const { widgets } = session;
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let bookmarkWidget = widgets.get('GridBookmark');
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// @ts-expect-error
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self.activateBookmarkWidget();
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bookmarkWidget = widgets.get('GridBookmark');
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}
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// @ts-
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// @ts-expect-error
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bookmarkWidget.addBookmark(firstRegion);
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}
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},
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package/dist/index.js.map
CHANGED
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{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;;;AAAA,kEAAyC;AAGzC,6CAA0E;AAM1E,QAAQ;AACR,4EAAuD;AACvD,8EAAyD;AAEzD,8EAAsD;AAEtD,eAAqB,SAAQ,gBAAM;IAAnC;;QACE,SAAI,GAAG,oBAAoB,CAAA;IAwH7B,CAAC;IAtHC,OAAO,CAAC,aAA4B;QAClC,IAAA,4BAAmB,EAAC,aAAa,CAAC,CAAA;QAElC,aAAa,CAAC,mBAAmB,CAC/B,6BAA6B,EAC7B,CAAC,gBAAsC,EAAE,EAAE;YACzC,IAAI,gBAAgB,CAAC,IAAI,KAAK,kBAAkB,EAAE;gBAChD,MAAM,EAAE,UAAU,EAAE,GAAG,gBAA4B,CAAA;gBACnD,MAAM,aAAa,GAAG,UAAU,CAAC,MAAM,CACrC,CAAC,IAA2B,EAAE,EAAE;oBAC9B,MAAM,cAAc,GAAG,IAAI,CAAC,SAAS,CAAA;oBACrC,MAAM,wBAAwB,GAAG,IAAI,CAAC,mBAAmB,CAAA;oBACzD,OAAO;wBACL,OAAO,EAAE;4BACP,sBAAsB;gCACpB,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;gCAChC,IAAI,IAAA,gCAAyB,EAAC,OAAO,CAAC,EAAE;oCACtC,IAAI,cAAc,GAAG,OAAO,CAAC,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;oCACxD,IAAI,CAAC,cAAc,EAAE;wCACnB,cAAc,GAAG,OAAO,CAAC,SAAS,CAChC,oBAAoB,EACpB,cAAc,EACd,EAAE,IAAI,EAAE,IAAI,EAAE,CACf,CAAA;qCACF;oCAED,OAAO,CAAC,UAAU,CAAC,cAAc,CAAC,CAAA;oCAClC,OAAO,cAAc,CAAA;iCACtB;gCAED,MAAM,IAAI,KAAK,CAAC,gCAAgC,CAAC,CAAA;4BACnD,CAAC;4BAED,qBAAqB;gCACnB,MAAM,eAAe,GAAG,IAAI,CAAC,kBAAkB,CAC7C,IAAI,CAAC,UAAU,EACf,IAAI,CAAC,WAAW,CACjB,CAAA;gCACD,MAAM,WAAW,GAAG,eAAe,CAAC,CAAC,CAAC,CAAA;gCACtC,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;gCAChC,IAAI,IAAA,gCAAyB,EAAC,OAAO,CAAC,EAAE;oCACtC,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,CAAA;oCAC3B,IAAI,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;oCAChD,IAAI,CAAC,cAAc,EAAE;wCACnB,IAAI,CAAC,sBAAsB,EAAE,CAAA;wCAC7B,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;qCAC7C;oCACD,
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+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":";;;;;AAAA,kEAAyC;AAGzC,6CAA0E;AAM1E,QAAQ;AACR,4EAAuD;AACvD,8EAAyD;AAEzD,8EAAsD;AAEtD,eAAqB,SAAQ,gBAAM;IAAnC;;QACE,SAAI,GAAG,oBAAoB,CAAA;IAwH7B,CAAC;IAtHC,OAAO,CAAC,aAA4B;QAClC,IAAA,4BAAmB,EAAC,aAAa,CAAC,CAAA;QAElC,aAAa,CAAC,mBAAmB,CAC/B,6BAA6B,EAC7B,CAAC,gBAAsC,EAAE,EAAE;YACzC,IAAI,gBAAgB,CAAC,IAAI,KAAK,kBAAkB,EAAE;gBAChD,MAAM,EAAE,UAAU,EAAE,GAAG,gBAA4B,CAAA;gBACnD,MAAM,aAAa,GAAG,UAAU,CAAC,MAAM,CACrC,CAAC,IAA2B,EAAE,EAAE;oBAC9B,MAAM,cAAc,GAAG,IAAI,CAAC,SAAS,CAAA;oBACrC,MAAM,wBAAwB,GAAG,IAAI,CAAC,mBAAmB,CAAA;oBACzD,OAAO;wBACL,OAAO,EAAE;4BACP,sBAAsB;gCACpB,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;gCAChC,IAAI,IAAA,gCAAyB,EAAC,OAAO,CAAC,EAAE;oCACtC,IAAI,cAAc,GAAG,OAAO,CAAC,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;oCACxD,IAAI,CAAC,cAAc,EAAE;wCACnB,cAAc,GAAG,OAAO,CAAC,SAAS,CAChC,oBAAoB,EACpB,cAAc,EACd,EAAE,IAAI,EAAE,IAAI,EAAE,CACf,CAAA;qCACF;oCAED,OAAO,CAAC,UAAU,CAAC,cAAc,CAAC,CAAA;oCAClC,OAAO,cAAc,CAAA;iCACtB;gCAED,MAAM,IAAI,KAAK,CAAC,gCAAgC,CAAC,CAAA;4BACnD,CAAC;4BAED,qBAAqB;gCACnB,MAAM,eAAe,GAAG,IAAI,CAAC,kBAAkB,CAC7C,IAAI,CAAC,UAAU,EACf,IAAI,CAAC,WAAW,CACjB,CAAA;gCACD,MAAM,WAAW,GAAG,eAAe,CAAC,CAAC,CAAC,CAAA;gCACtC,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;gCAChC,IAAI,IAAA,gCAAyB,EAAC,OAAO,CAAC,EAAE;oCACtC,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,CAAA;oCAC3B,IAAI,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;oCAChD,IAAI,CAAC,cAAc,EAAE;wCACnB,IAAI,CAAC,sBAAsB,EAAE,CAAA;wCAC7B,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;qCAC7C;oCACD,mBAAmB;oCACnB,cAAc,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;iCACxC;4BACH,CAAC;yBACF;wBACD,KAAK,EAAE;4BACL,SAAS;gCACP,MAAM,YAAY,GAAG;oCACnB,GAAG,cAAc,EAAE;oCACnB,EAAE,IAAI,EAAE,SAAS,EAAE;oCACnB;wCACE,KAAK,EAAE,sBAAsB;wCAC7B,IAAI,EAAE,mBAAa;wCACnB,mBAAmB;wCACnB,OAAO,EAAE,IAAI,CAAC,sBAAsB;qCACrC;oCACD;wCACE,KAAK,EAAE,yBAAyB;wCAChC,IAAI,EAAE,kBAAY;wCAClB,mBAAmB;wCACnB,OAAO,EAAE,IAAI,CAAC,qBAAqB;qCACpC;iCACF,CAAA;gCAED,OAAO,YAAY,CAAA;4BACrB,CAAC;4BAED,mBAAmB;gCACjB,MAAM,sBAAsB,GAAG;oCAC7B,GAAG,wBAAwB,EAAE;oCAC7B;wCACE,KAAK,EAAE,iBAAiB;wCACxB,IAAI,EAAE,kBAAY;wCAClB,OAAO,EAAE,GAAG,EAAE;4CACZ,MAAM,EAAE,UAAU,EAAE,WAAW,EAAE,GAAG,IAAI,CAAA;4CACxC,MAAM,eAAe,GAAG,IAAI,CAAC,kBAAkB,CAC7C,UAAU,EACV,WAAW,CACZ,CAAA;4CACD,MAAM,WAAW,GAAG,eAAe,CAAC,CAAC,CAAC,CAAA;4CACtC,MAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,IAAI,CAAC,CAAA;4CAChC,IAAI,IAAA,gCAAyB,EAAC,OAAO,CAAC,EAAE;gDACtC,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,CAAA;gDAC3B,IAAI,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;gDAChD,IAAI,CAAC,cAAc,EAAE;oDACnB,mBAAmB;oDACnB,IAAI,CAAC,sBAAsB,EAAE,CAAA;oDAC7B,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;iDAC7C;gDACD,mBAAmB;gDACnB,cAAc,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;6CACxC;wCACH,CAAC;qCACF;iCACF,CAAA;gCAED,OAAO,sBAAsB,CAAA;4BAC/B,CAAC;yBACF;qBACF,CAAA;gBACH,CAAC,CACF,CAEA;gBAAC,gBAA6B,CAAC,UAAU,GAAG,aAAa,CAAA;aAC3D;YACD,OAAO,gBAAgB,CAAA;QACzB,CAAC,CACF,CAAA;IACH,CAAC;IAED,SAAS,CAAC,cAA6B,IAAG,CAAC;CAC5C;AAzHD,4BAyHC"}
|
|
@@ -18,7 +18,7 @@ export default function f(pluginManager) {
|
|
|
18
18
|
})
|
|
19
19
|
.actions(self => ({
|
|
20
20
|
importBookmarks(regions) {
|
|
21
|
-
self.bookmarkedRegions = cast(self.bookmarkedRegions
|
|
21
|
+
self.bookmarkedRegions = cast([...self.bookmarkedRegions, ...regions]);
|
|
22
22
|
},
|
|
23
23
|
addBookmark(region) {
|
|
24
24
|
self.bookmarkedRegions.push(region);
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/model.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,IAAI,EAAY,MAAM,iBAAiB,CAAA;AAGvD,OAAO,EAAE,MAAM,IAAI,WAAW,EAAE,SAAS,EAAE,MAAM,8BAA8B,CAAA;AAE/E,MAAM,kBAAkB,GAAG,KAAK;KAC7B,OAAO,CACN,WAAW,EACX,KAAK,CAAC,KAAK,CAAC,OAAO,EAAE,EAAE,KAAK,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,EAAE,CAAC,EAAE,CAAC,CAClE;KACA,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,QAAQ,CAAC,KAAa;QACpB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;IACpB,CAAC;CACF,CAAC,CAAC,CAAA;AAEL,MAAM,CAAC,OAAO,UAAU,CAAC,CAAC,aAA4B;IACpD,OAAO,KAAK;SACT,KAAK,CAAC,mBAAmB,EAAE;QAC1B,EAAE,EAAE,SAAS;QACb,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,oBAAoB,CAAC;QACzC,IAAI,EAAE,KAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;QACD,iBAAiB,EAAE,KAAK,CAAC,KAAK,CAAC,kBAAkB,CAAC;QAClD,qBAAqB,EAAE,EAAE;KAC1B,CAAC;SACD,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB,eAAe,CAAC,OAAiB;YAC/B,IAAI,CAAC,iBAAiB,GAAG,IAAI,CAAC,IAAI,CAAC,iBAAiB,
|
|
1
|
+
{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/model.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,IAAI,EAAY,MAAM,iBAAiB,CAAA;AAGvD,OAAO,EAAE,MAAM,IAAI,WAAW,EAAE,SAAS,EAAE,MAAM,8BAA8B,CAAA;AAE/E,MAAM,kBAAkB,GAAG,KAAK;KAC7B,OAAO,CACN,WAAW,EACX,KAAK,CAAC,KAAK,CAAC,OAAO,EAAE,EAAE,KAAK,EAAE,KAAK,CAAC,QAAQ,CAAC,KAAK,CAAC,MAAM,EAAE,EAAE,CAAC,EAAE,CAAC,CAClE;KACA,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;IAChB,QAAQ,CAAC,KAAa;QACpB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;IACpB,CAAC;CACF,CAAC,CAAC,CAAA;AAEL,MAAM,CAAC,OAAO,UAAU,CAAC,CAAC,aAA4B;IACpD,OAAO,KAAK;SACT,KAAK,CAAC,mBAAmB,EAAE;QAC1B,EAAE,EAAE,SAAS;QACb,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,oBAAoB,CAAC;QACzC,IAAI,EAAE,KAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;QACD,iBAAiB,EAAE,KAAK,CAAC,KAAK,CAAC,kBAAkB,CAAC;QAClD,qBAAqB,EAAE,EAAE;KAC1B,CAAC;SACD,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB,eAAe,CAAC,OAAiB;YAC/B,IAAI,CAAC,iBAAiB,GAAG,IAAI,CAAC,CAAC,GAAG,IAAI,CAAC,iBAAiB,EAAE,GAAG,OAAO,CAAC,CAAC,CAAA;QACxE,CAAC;QACD,WAAW,CAAC,MAAc;YACxB,IAAI,CAAC,iBAAiB,CAAC,IAAI,CAAC,MAAM,CAAC,CAAA;QACrC,CAAC;QACD,cAAc,CAAC,KAAa;YAC1B,IAAI,CAAC,iBAAiB,CAAC,MAAM,CAAC,KAAK,EAAE,CAAC,CAAC,CAAA;QACzC,CAAC;QACD,iBAAiB;YACf,IAAI,CAAC,iBAAiB,CAAC,KAAK,EAAE,CAAA;QAChC,CAAC;QACD,mBAAmB,CAAC,KAAa,EAAE,KAAa;;YAC9C,MAAA,IAAI,CAAC,iBAAiB,CAAC,KAAK,CAAC,0CAAE,QAAQ,CAAC,KAAK,CAAC,CAAA;QAChD,CAAC;QACD,mBAAmB,CAAC,QAAgB;YAClC,IAAI,CAAC,qBAAqB,GAAG,QAAQ,CAAA;QACvC,CAAC;KACF,CAAC,CAAC;SACF,KAAK,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QACd,IAAI,gBAAgB;YAClB,OAAO,CACL,IAAI,CAAC,qBAAqB;gBAC1B,CAAC,IAAI,CAAC,iBAAiB,CAAC,MAAM;oBAC5B,CAAC,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC,CAAC,CAAC,YAAY;oBACxC,CAAC,CAAC,EAAE,CAAC,CACR,CAAA;QACH,CAAC;QACD,IAAI,UAAU;YACZ,OAAO;gBACL,GAAG,IAAI,GAAG,CAAC,IAAI,CAAC,iBAAiB,CAAC,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,MAAM,CAAC,YAAY,CAAC,CAAC;aACtE,CAAA;QACH,CAAC;KACF,CAAC,CAAC,CAAA;AACP,CAAC"}
|
|
@@ -9,7 +9,7 @@ export async function navToBookmark(locString, views, model) {
|
|
|
9
9
|
const newViewId = `${model.id}_${selectedAssembly}`;
|
|
10
10
|
let view = (views.find(v => v.type === 'LinearGenomeView' && v.id === newViewId) ||
|
|
11
11
|
views.find(v => v.type === 'LinearGenomeView' &&
|
|
12
|
-
// @ts-
|
|
12
|
+
// @ts-expect-error
|
|
13
13
|
v.assemblyNames[0] === selectedAssembly));
|
|
14
14
|
if (!view) {
|
|
15
15
|
view = session.addView('LinearGenomeView', {
|
|
@@ -49,13 +49,9 @@ export function downloadBookmarkFile(bookmarkedRegions, fileFormat, model) {
|
|
|
49
49
|
? 'text/x-bed;charset=utf-8'
|
|
50
50
|
: 'text/tab-separated-values;charset=utf-8',
|
|
51
51
|
});
|
|
52
|
-
|
|
53
|
-
|
|
54
|
-
|
|
55
|
-
}
|
|
56
|
-
else {
|
|
57
|
-
fileName = 'jbrowse_bookmarks.tsv';
|
|
58
|
-
}
|
|
52
|
+
const fileName = fileFormat === 'BED'
|
|
53
|
+
? `jbrowse_bookmarks_${selectedAssembly}.bed`
|
|
54
|
+
: 'jbrowse_bookmarks.tsv';
|
|
59
55
|
saveAs(blob, fileName);
|
|
60
56
|
}
|
|
61
57
|
//# sourceMappingURL=utils.js.map
|
|
@@ -1 +1 @@
|
|
|
1
|
-
{"version":3,"file":"utils.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/utils.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAE,MAAM,YAAY,CAAA;AACnC,OAAO,EAAE,UAAU,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAA;AAYlE,MAAM,CAAC,KAAK,UAAU,aAAa,CACjC,SAAiB,EACjB,KAA0B,EAC1B,KAAwB;IAExB,MAAM,OAAO,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACjC,IAAI;QACF,0EAA0E;QAC1E,iEAAiE;QACjE,MAAM,EAAE,gBAAgB,EAAE,GAAG,KAAK,CAAA;QAClC,MAAM,SAAS,GAAG,GAAG,KAAK,CAAC,EAAE,IAAI,gBAAgB,EAAE,CAAA;QACnD,IAAI,IAAI,GAAG,CAAC,KAAK,CAAC,IAAI,CACpB,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,kBAAkB,IAAI,CAAC,CAAC,EAAE,KAAK,SAAS,CACzD;YACC,KAAK,CAAC,IAAI,CACR,CAAC,CAAC,EAAE,CACF,CAAC,CAAC,IAAI,KAAK,kBAAkB;gBAC7B,
|
|
1
|
+
{"version":3,"file":"utils.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/utils.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAE,MAAM,YAAY,CAAA;AACnC,OAAO,EAAE,UAAU,EAAE,iBAAiB,EAAE,MAAM,oBAAoB,CAAA;AAYlE,MAAM,CAAC,KAAK,UAAU,aAAa,CACjC,SAAiB,EACjB,KAA0B,EAC1B,KAAwB;IAExB,MAAM,OAAO,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACjC,IAAI;QACF,0EAA0E;QAC1E,iEAAiE;QACjE,MAAM,EAAE,gBAAgB,EAAE,GAAG,KAAK,CAAA;QAClC,MAAM,SAAS,GAAG,GAAG,KAAK,CAAC,EAAE,IAAI,gBAAgB,EAAE,CAAA;QACnD,IAAI,IAAI,GAAG,CAAC,KAAK,CAAC,IAAI,CACpB,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,kBAAkB,IAAI,CAAC,CAAC,EAAE,KAAK,SAAS,CACzD;YACC,KAAK,CAAC,IAAI,CACR,CAAC,CAAC,EAAE,CACF,CAAC,CAAC,IAAI,KAAK,kBAAkB;gBAC7B,mBAAmB;gBACnB,CAAC,CAAC,aAAa,CAAC,CAAC,CAAC,KAAK,gBAAgB,CAC1C,CAAa,CAAA;QAEhB,IAAI,CAAC,IAAI,EAAE;YACT,IAAI,GAAG,OAAO,CAAC,OAAO,CAAC,kBAAkB,EAAE;gBACzC,EAAE,EAAE,SAAS;aACd,CAAQ,CAAA;SACV;QACD,MAAM,IAAI,CAAC,cAAc,CAAC,SAAS,EAAE,gBAAgB,CAAC,CAAA;KACvD;IAAC,OAAO,CAAC,EAAE;QACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;QAChB,OAAO,CAAC,MAAM,CAAC,GAAG,CAAC,EAAE,EAAE,OAAO,CAAC,CAAA;KAChC;AACH,CAAC;AAED,MAAM,UAAU,oBAAoB,CAClC,iBAAkC,EAClC,UAAkB,EAClB,KAAwB;IAExB,MAAM,EAAE,gBAAgB,EAAE,GAAG,KAAK,CAAA;IAClC,MAAM,UAAU,GACd,UAAU,KAAK,KAAK;QAClB,CAAC,CAAC,wDAAwD;QAC1D,CAAC,CAAC,EAAE,CAAA;IAER,MAAM,YAAY,GAAG,iBAAiB;SACnC,GAAG,CAAC,CAAC,CAAC,EAAE;QACP,MAAM,EAAE,KAAK,EAAE,GAAG,CAAC,CAAA;QACnB,MAAM,QAAQ,GAAG,KAAK,KAAK,EAAE,CAAC,CAAC,CAAC,GAAG,CAAC,CAAC,CAAC,KAAK,CAAA;QAC3C,MAAM,SAAS,GAAG,iBAAiB,CAAC,CAAC,CAAC,CAAA;QAEtC,IAAI,UAAU,KAAK,KAAK,EAAE;YACxB,IAAI,CAAC,CAAC,YAAY,KAAK,gBAAgB,IAAI,gBAAgB,KAAK,KAAK,EAAE;gBACrE,OAAO,GAAG,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC,KAAK,KAAK,CAAC,CAAC,GAAG,KAAK,QAAQ,IAAI,CAAA;aAC3D;YACD,OAAO,EAAE,CAAA;SACV;aAAM;YACL,OAAO,GAAG,CAAC,CAAC,OAAO,KAAK,CAAC,CAAC,KAAK,GAAG,CAAC,KAAK,CAAC,CAAC,GAAG,KAAK,QAAQ,KACxD,CAAC,CAAC,YACJ,KAAK,SAAS,IAAI,CAAA;SACnB;IACH,CAAC,CAAC;SACD,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC,CAAC,GAAG,CAAC,EAAE,UAAU,CAAC,CAAA;IAEtC,MAAM,IAAI,GAAG,IAAI,IAAI,CAAC,CAAC,YAAY,IAAI,EAAE,CAAC,EAAE;QAC1C,IAAI,EACF,UAAU,KAAK,KAAK;YAClB,CAAC,CAAC,0BAA0B;YAC5B,CAAC,CAAC,yCAAyC;KAChD,CAAC,CAAA;IAEF,MAAM,QAAQ,GACZ,UAAU,KAAK,KAAK;QAClB,CAAC,CAAC,qBAAqB,gBAAgB,MAAM;QAC7C,CAAC,CAAC,uBAAuB,CAAA;IAE7B,MAAM,CAAC,IAAI,EAAE,QAAQ,CAAC,CAAA;AACxB,CAAC"}
|
package/esm/index.js
CHANGED
|
@@ -42,7 +42,7 @@ export default class extends Plugin {
|
|
|
42
42
|
this.activateBookmarkWidget();
|
|
43
43
|
bookmarkWidget = widgets.get('GridBookmark');
|
|
44
44
|
}
|
|
45
|
-
// @ts-
|
|
45
|
+
// @ts-expect-error
|
|
46
46
|
bookmarkWidget.addBookmark(firstRegion);
|
|
47
47
|
}
|
|
48
48
|
},
|
|
@@ -55,13 +55,13 @@ export default class extends Plugin {
|
|
|
55
55
|
{
|
|
56
56
|
label: 'Open bookmark widget',
|
|
57
57
|
icon: BookmarksIcon,
|
|
58
|
-
// @ts-
|
|
58
|
+
// @ts-expect-error
|
|
59
59
|
onClick: self.activateBookmarkWidget,
|
|
60
60
|
},
|
|
61
61
|
{
|
|
62
62
|
label: 'Bookmark current region',
|
|
63
63
|
icon: BookmarkIcon,
|
|
64
|
-
// @ts-
|
|
64
|
+
// @ts-expect-error
|
|
65
65
|
onClick: self.bookmarkCurrentRegion,
|
|
66
66
|
},
|
|
67
67
|
];
|
|
@@ -82,11 +82,11 @@ export default class extends Plugin {
|
|
|
82
82
|
const { widgets } = session;
|
|
83
83
|
let bookmarkWidget = widgets.get('GridBookmark');
|
|
84
84
|
if (!bookmarkWidget) {
|
|
85
|
-
// @ts-
|
|
85
|
+
// @ts-expect-error
|
|
86
86
|
self.activateBookmarkWidget();
|
|
87
87
|
bookmarkWidget = widgets.get('GridBookmark');
|
|
88
88
|
}
|
|
89
|
-
// @ts-
|
|
89
|
+
// @ts-expect-error
|
|
90
90
|
bookmarkWidget.addBookmark(firstRegion);
|
|
91
91
|
}
|
|
92
92
|
},
|
package/esm/index.js.map
CHANGED
|
@@ -1 +1 @@
|
|
|
1
|
-
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|
|
1
|
+
{"version":3,"file":"index.js","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA,OAAO,MAAM,MAAM,sBAAsB,CAAA;AAGzC,OAAO,EAAE,UAAU,EAAE,yBAAyB,EAAE,MAAM,oBAAoB,CAAA;AAM1E,QAAQ;AACR,OAAO,YAAY,MAAM,8BAA8B,CAAA;AACvD,OAAO,aAAa,MAAM,+BAA+B,CAAA;AAEzD,OAAO,mBAAmB,MAAM,sBAAsB,CAAA;AAEtD,MAAM,CAAC,OAAO,MAAO,SAAQ,MAAM;IAAnC;;QACE,SAAI,GAAG,oBAAoB,CAAA;IAwH7B,CAAC;IAtHC,OAAO,CAAC,aAA4B;QAClC,mBAAmB,CAAC,aAAa,CAAC,CAAA;QAElC,aAAa,CAAC,mBAAmB,CAC/B,6BAA6B,EAC7B,CAAC,gBAAsC,EAAE,EAAE;YACzC,IAAI,gBAAgB,CAAC,IAAI,KAAK,kBAAkB,EAAE;gBAChD,MAAM,EAAE,UAAU,EAAE,GAAG,gBAA4B,CAAA;gBACnD,MAAM,aAAa,GAAG,UAAU,CAAC,MAAM,CACrC,CAAC,IAA2B,EAAE,EAAE;oBAC9B,MAAM,cAAc,GAAG,IAAI,CAAC,SAAS,CAAA;oBACrC,MAAM,wBAAwB,GAAG,IAAI,CAAC,mBAAmB,CAAA;oBACzD,OAAO;wBACL,OAAO,EAAE;4BACP,sBAAsB;gCACpB,MAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;gCAChC,IAAI,yBAAyB,CAAC,OAAO,CAAC,EAAE;oCACtC,IAAI,cAAc,GAAG,OAAO,CAAC,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;oCACxD,IAAI,CAAC,cAAc,EAAE;wCACnB,cAAc,GAAG,OAAO,CAAC,SAAS,CAChC,oBAAoB,EACpB,cAAc,EACd,EAAE,IAAI,EAAE,IAAI,EAAE,CACf,CAAA;qCACF;oCAED,OAAO,CAAC,UAAU,CAAC,cAAc,CAAC,CAAA;oCAClC,OAAO,cAAc,CAAA;iCACtB;gCAED,MAAM,IAAI,KAAK,CAAC,gCAAgC,CAAC,CAAA;4BACnD,CAAC;4BAED,qBAAqB;gCACnB,MAAM,eAAe,GAAG,IAAI,CAAC,kBAAkB,CAC7C,IAAI,CAAC,UAAU,EACf,IAAI,CAAC,WAAW,CACjB,CAAA;gCACD,MAAM,WAAW,GAAG,eAAe,CAAC,CAAC,CAAC,CAAA;gCACtC,MAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;gCAChC,IAAI,yBAAyB,CAAC,OAAO,CAAC,EAAE;oCACtC,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,CAAA;oCAC3B,IAAI,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;oCAChD,IAAI,CAAC,cAAc,EAAE;wCACnB,IAAI,CAAC,sBAAsB,EAAE,CAAA;wCAC7B,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;qCAC7C;oCACD,mBAAmB;oCACnB,cAAc,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;iCACxC;4BACH,CAAC;yBACF;wBACD,KAAK,EAAE;4BACL,SAAS;gCACP,MAAM,YAAY,GAAG;oCACnB,GAAG,cAAc,EAAE;oCACnB,EAAE,IAAI,EAAE,SAAS,EAAE;oCACnB;wCACE,KAAK,EAAE,sBAAsB;wCAC7B,IAAI,EAAE,aAAa;wCACnB,mBAAmB;wCACnB,OAAO,EAAE,IAAI,CAAC,sBAAsB;qCACrC;oCACD;wCACE,KAAK,EAAE,yBAAyB;wCAChC,IAAI,EAAE,YAAY;wCAClB,mBAAmB;wCACnB,OAAO,EAAE,IAAI,CAAC,qBAAqB;qCACpC;iCACF,CAAA;gCAED,OAAO,YAAY,CAAA;4BACrB,CAAC;4BAED,mBAAmB;gCACjB,MAAM,sBAAsB,GAAG;oCAC7B,GAAG,wBAAwB,EAAE;oCAC7B;wCACE,KAAK,EAAE,iBAAiB;wCACxB,IAAI,EAAE,YAAY;wCAClB,OAAO,EAAE,GAAG,EAAE;4CACZ,MAAM,EAAE,UAAU,EAAE,WAAW,EAAE,GAAG,IAAI,CAAA;4CACxC,MAAM,eAAe,GAAG,IAAI,CAAC,kBAAkB,CAC7C,UAAU,EACV,WAAW,CACZ,CAAA;4CACD,MAAM,WAAW,GAAG,eAAe,CAAC,CAAC,CAAC,CAAA;4CACtC,MAAM,OAAO,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;4CAChC,IAAI,yBAAyB,CAAC,OAAO,CAAC,EAAE;gDACtC,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,CAAA;gDAC3B,IAAI,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;gDAChD,IAAI,CAAC,cAAc,EAAE;oDACnB,mBAAmB;oDACnB,IAAI,CAAC,sBAAsB,EAAE,CAAA;oDAC7B,cAAc,GAAG,OAAO,CAAC,GAAG,CAAC,cAAc,CAAC,CAAA;iDAC7C;gDACD,mBAAmB;gDACnB,cAAc,CAAC,WAAW,CAAC,WAAW,CAAC,CAAA;6CACxC;wCACH,CAAC;qCACF;iCACF,CAAA;gCAED,OAAO,sBAAsB,CAAA;4BAC/B,CAAC;yBACF;qBACF,CAAA;gBACH,CAAC,CACF,CAEA;gBAAC,gBAA6B,CAAC,UAAU,GAAG,aAAa,CAAA;aAC3D;YACD,OAAO,gBAAgB,CAAA;QACzB,CAAC,CACF,CAAA;IACH,CAAC;IAED,SAAS,CAAC,cAA6B,IAAG,CAAC;CAC5C"}
|
package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@jbrowse/plugin-grid-bookmark",
|
|
3
|
-
"version": "2.4.
|
|
3
|
+
"version": "2.4.1",
|
|
4
4
|
"description": "JBrowse 2 grid bookmark widget",
|
|
5
5
|
"keywords": [
|
|
6
6
|
"jbrowse",
|
|
@@ -59,5 +59,5 @@
|
|
|
59
59
|
"distModule": "esm/index.js",
|
|
60
60
|
"srcModule": "src/index.ts",
|
|
61
61
|
"module": "esm/index.js",
|
|
62
|
-
"gitHead": "
|
|
62
|
+
"gitHead": "747c50c4edc0184827efa4f8dfc576ca9a72caeb"
|
|
63
63
|
}
|
|
@@ -27,7 +27,7 @@ export default function f(pluginManager: PluginManager) {
|
|
|
27
27
|
})
|
|
28
28
|
.actions(self => ({
|
|
29
29
|
importBookmarks(regions: Region[]) {
|
|
30
|
-
self.bookmarkedRegions = cast(self.bookmarkedRegions
|
|
30
|
+
self.bookmarkedRegions = cast([...self.bookmarkedRegions, ...regions])
|
|
31
31
|
},
|
|
32
32
|
addBookmark(region: Region) {
|
|
33
33
|
self.bookmarkedRegions.push(region)
|
|
@@ -28,7 +28,7 @@ export async function navToBookmark(
|
|
|
28
28
|
views.find(
|
|
29
29
|
v =>
|
|
30
30
|
v.type === 'LinearGenomeView' &&
|
|
31
|
-
// @ts-
|
|
31
|
+
// @ts-expect-error
|
|
32
32
|
v.assemblyNames[0] === selectedAssembly,
|
|
33
33
|
)) as MaybeLGV
|
|
34
34
|
|
|
@@ -81,12 +81,10 @@ export function downloadBookmarkFile(
|
|
|
81
81
|
: 'text/tab-separated-values;charset=utf-8',
|
|
82
82
|
})
|
|
83
83
|
|
|
84
|
-
|
|
85
|
-
|
|
86
|
-
|
|
87
|
-
|
|
88
|
-
fileName = 'jbrowse_bookmarks.tsv'
|
|
89
|
-
}
|
|
84
|
+
const fileName =
|
|
85
|
+
fileFormat === 'BED'
|
|
86
|
+
? `jbrowse_bookmarks_${selectedAssembly}.bed`
|
|
87
|
+
: 'jbrowse_bookmarks.tsv'
|
|
90
88
|
|
|
91
89
|
saveAs(blob, fileName)
|
|
92
90
|
}
|
package/src/index.ts
CHANGED
|
@@ -63,7 +63,7 @@ export default class extends Plugin {
|
|
|
63
63
|
this.activateBookmarkWidget()
|
|
64
64
|
bookmarkWidget = widgets.get('GridBookmark')
|
|
65
65
|
}
|
|
66
|
-
// @ts-
|
|
66
|
+
// @ts-expect-error
|
|
67
67
|
bookmarkWidget.addBookmark(firstRegion)
|
|
68
68
|
}
|
|
69
69
|
},
|
|
@@ -76,13 +76,13 @@ export default class extends Plugin {
|
|
|
76
76
|
{
|
|
77
77
|
label: 'Open bookmark widget',
|
|
78
78
|
icon: BookmarksIcon,
|
|
79
|
-
// @ts-
|
|
79
|
+
// @ts-expect-error
|
|
80
80
|
onClick: self.activateBookmarkWidget,
|
|
81
81
|
},
|
|
82
82
|
{
|
|
83
83
|
label: 'Bookmark current region',
|
|
84
84
|
icon: BookmarkIcon,
|
|
85
|
-
// @ts-
|
|
85
|
+
// @ts-expect-error
|
|
86
86
|
onClick: self.bookmarkCurrentRegion,
|
|
87
87
|
},
|
|
88
88
|
]
|
|
@@ -108,11 +108,11 @@ export default class extends Plugin {
|
|
|
108
108
|
const { widgets } = session
|
|
109
109
|
let bookmarkWidget = widgets.get('GridBookmark')
|
|
110
110
|
if (!bookmarkWidget) {
|
|
111
|
-
// @ts-
|
|
111
|
+
// @ts-expect-error
|
|
112
112
|
self.activateBookmarkWidget()
|
|
113
113
|
bookmarkWidget = widgets.get('GridBookmark')
|
|
114
114
|
}
|
|
115
|
-
// @ts-
|
|
115
|
+
// @ts-expect-error
|
|
116
116
|
bookmarkWidget.addBookmark(firstRegion)
|
|
117
117
|
}
|
|
118
118
|
},
|