@jbrowse/plugin-grid-bookmark 1.7.11 → 2.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (67) hide show
  1. package/dist/GridBookmarkWidget/components/AssemblySelector.js +40 -74
  2. package/dist/GridBookmarkWidget/components/AssemblySelector.js.map +1 -0
  3. package/dist/GridBookmarkWidget/components/ClearBookmarks.js +79 -80
  4. package/dist/GridBookmarkWidget/components/ClearBookmarks.js.map +1 -0
  5. package/dist/GridBookmarkWidget/components/DeleteBookmark.js +47 -61
  6. package/dist/GridBookmarkWidget/components/DeleteBookmark.js.map +1 -0
  7. package/dist/GridBookmarkWidget/components/DownloadBookmarks.js +85 -104
  8. package/dist/GridBookmarkWidget/components/DownloadBookmarks.js.map +1 -0
  9. package/dist/GridBookmarkWidget/components/GridBookmarkWidget.js +159 -185
  10. package/dist/GridBookmarkWidget/components/GridBookmarkWidget.js.map +1 -0
  11. package/dist/GridBookmarkWidget/components/ImportBookmarks.js +164 -181
  12. package/dist/GridBookmarkWidget/components/ImportBookmarks.js.map +1 -0
  13. package/dist/GridBookmarkWidget/index.d.ts +0 -1
  14. package/dist/GridBookmarkWidget/index.js +10 -28
  15. package/dist/GridBookmarkWidget/index.js.map +1 -0
  16. package/dist/GridBookmarkWidget/model.js +77 -67
  17. package/dist/GridBookmarkWidget/model.js.map +1 -0
  18. package/dist/GridBookmarkWidget/types.js +2 -4
  19. package/dist/GridBookmarkWidget/types.js.map +1 -0
  20. package/dist/GridBookmarkWidget/utils.js +129 -129
  21. package/dist/GridBookmarkWidget/utils.js.map +1 -0
  22. package/dist/index.js +181 -187
  23. package/dist/index.js.map +1 -0
  24. package/esm/GridBookmarkWidget/components/AssemblySelector.d.ts +7 -0
  25. package/esm/GridBookmarkWidget/components/AssemblySelector.js +41 -0
  26. package/esm/GridBookmarkWidget/components/AssemblySelector.js.map +1 -0
  27. package/esm/GridBookmarkWidget/components/ClearBookmarks.d.ts +7 -0
  28. package/esm/GridBookmarkWidget/components/ClearBookmarks.js +40 -0
  29. package/esm/GridBookmarkWidget/components/ClearBookmarks.js.map +1 -0
  30. package/esm/GridBookmarkWidget/components/DeleteBookmark.d.ts +9 -0
  31. package/esm/GridBookmarkWidget/components/DeleteBookmark.js +46 -0
  32. package/esm/GridBookmarkWidget/components/DeleteBookmark.js.map +1 -0
  33. package/esm/GridBookmarkWidget/components/DownloadBookmarks.d.ts +7 -0
  34. package/esm/GridBookmarkWidget/components/DownloadBookmarks.js +50 -0
  35. package/esm/GridBookmarkWidget/components/DownloadBookmarks.js.map +1 -0
  36. package/esm/GridBookmarkWidget/components/GridBookmarkWidget.d.ts +7 -0
  37. package/esm/GridBookmarkWidget/components/GridBookmarkWidget.js +95 -0
  38. package/esm/GridBookmarkWidget/components/GridBookmarkWidget.js.map +1 -0
  39. package/esm/GridBookmarkWidget/components/ImportBookmarks.d.ts +8 -0
  40. package/esm/GridBookmarkWidget/components/ImportBookmarks.js +79 -0
  41. package/esm/GridBookmarkWidget/components/ImportBookmarks.js.map +1 -0
  42. package/esm/GridBookmarkWidget/index.d.ts +2 -0
  43. package/esm/GridBookmarkWidget/index.js +4 -0
  44. package/esm/GridBookmarkWidget/index.js.map +1 -0
  45. package/esm/GridBookmarkWidget/model.d.ts +35 -0
  46. package/esm/GridBookmarkWidget/model.js +54 -0
  47. package/esm/GridBookmarkWidget/model.js.map +1 -0
  48. package/esm/GridBookmarkWidget/types.d.ts +7 -0
  49. package/esm/GridBookmarkWidget/types.js +2 -0
  50. package/esm/GridBookmarkWidget/types.js.map +1 -0
  51. package/esm/GridBookmarkWidget/utils.d.ts +5 -0
  52. package/esm/GridBookmarkWidget/utils.js +77 -0
  53. package/esm/GridBookmarkWidget/utils.js.map +1 -0
  54. package/esm/index.d.ts +7 -0
  55. package/esm/index.js +116 -0
  56. package/esm/index.js.map +1 -0
  57. package/package.json +23 -15
  58. package/src/GridBookmarkWidget/components/AssemblySelector.tsx +9 -20
  59. package/src/GridBookmarkWidget/components/ClearBookmarks.tsx +6 -6
  60. package/src/GridBookmarkWidget/components/DeleteBookmark.tsx +5 -5
  61. package/src/GridBookmarkWidget/components/DownloadBookmarks.tsx +6 -6
  62. package/src/GridBookmarkWidget/components/GridBookmarkWidget.tsx +94 -111
  63. package/src/GridBookmarkWidget/components/ImportBookmarks.tsx +6 -6
  64. package/src/GridBookmarkWidget/index.js +0 -2
  65. package/src/index.ts +2 -2
  66. package/dist/GridBookmarkWidget/components/GridBookmarkWidget.test.js +0 -302
  67. package/dist/index.test.js +0 -35
@@ -1,190 +1,173 @@
1
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  "use strict";
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-
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- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
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-
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- var _typeof = require("@babel/runtime/helpers/typeof");
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-
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- Object.defineProperty(exports, "__esModule", {
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- value: true
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+ var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
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+ if (k2 === undefined) k2 = k;
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+ var desc = Object.getOwnPropertyDescriptor(m, k);
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+ if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
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+ desc = { enumerable: true, get: function() { return m[k]; } };
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+ }
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+ Object.defineProperty(o, k2, desc);
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+ }) : (function(o, m, k, k2) {
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+ if (k2 === undefined) k2 = k;
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+ o[k2] = m[k];
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+ }));
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+ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
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+ Object.defineProperty(o, "default", { enumerable: true, value: v });
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+ }) : function(o, v) {
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+ o["default"] = v;
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  });
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- exports.default = void 0;
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-
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- var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
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-
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- var _asyncToGenerator2 = _interopRequireDefault(require("@babel/runtime/helpers/asyncToGenerator"));
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-
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- var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
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-
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- var _react = _interopRequireWildcard(require("react"));
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-
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- var _mobxReact = require("mobx-react");
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-
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- var _util = require("@jbrowse/core/util");
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-
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- var _AssemblySelector = _interopRequireDefault(require("@jbrowse/core/ui/AssemblySelector"));
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-
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- var _ui = require("@jbrowse/core/ui");
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-
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- var _io = require("@jbrowse/core/util/io");
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-
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- var _core = require("@material-ui/core");
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-
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- var _Close = _interopRequireDefault(require("@material-ui/icons/Close"));
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-
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- var _Publish = _interopRequireDefault(require("@material-ui/icons/Publish"));
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-
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- function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
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-
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- function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
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-
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- var useStyles = (0, _core.makeStyles)(function () {
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- return {
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+ var __importStar = (this && this.__importStar) || function (mod) {
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+ if (mod && mod.__esModule) return mod;
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+ var result = {};
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+ if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
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+ __setModuleDefault(result, mod);
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+ return result;
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+ };
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+ var __awaiter = (this && this.__awaiter) || function (thisArg, _arguments, P, generator) {
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+ function adopt(value) { return value instanceof P ? value : new P(function (resolve) { resolve(value); }); }
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+ return new (P || (P = Promise))(function (resolve, reject) {
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+ function fulfilled(value) { try { step(generator.next(value)); } catch (e) { reject(e); } }
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+ function rejected(value) { try { step(generator["throw"](value)); } catch (e) { reject(e); } }
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+ function step(result) { result.done ? resolve(result.value) : adopt(result.value).then(fulfilled, rejected); }
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+ step((generator = generator.apply(thisArg, _arguments || [])).next());
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+ });
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+ };
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+ var __generator = (this && this.__generator) || function (thisArg, body) {
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+ var _ = { label: 0, sent: function() { if (t[0] & 1) throw t[1]; return t[1]; }, trys: [], ops: [] }, f, y, t, g;
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+ return g = { next: verb(0), "throw": verb(1), "return": verb(2) }, typeof Symbol === "function" && (g[Symbol.iterator] = function() { return this; }), g;
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+ function verb(n) { return function (v) { return step([n, v]); }; }
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+ function step(op) {
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+ if (f) throw new TypeError("Generator is already executing.");
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+ while (_) try {
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+ if (f = 1, y && (t = op[0] & 2 ? y["return"] : op[0] ? y["throw"] || ((t = y["return"]) && t.call(y), 0) : y.next) && !(t = t.call(y, op[1])).done) return t;
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+ if (y = 0, t) op = [op[0] & 2, t.value];
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+ switch (op[0]) {
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+ case 0: case 1: t = op; break;
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+ case 4: _.label++; return { value: op[1], done: false };
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+ case 5: _.label++; y = op[1]; op = [0]; continue;
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+ case 7: op = _.ops.pop(); _.trys.pop(); continue;
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+ default:
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+ if (!(t = _.trys, t = t.length > 0 && t[t.length - 1]) && (op[0] === 6 || op[0] === 2)) { _ = 0; continue; }
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+ if (op[0] === 3 && (!t || (op[1] > t[0] && op[1] < t[3]))) { _.label = op[1]; break; }
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+ if (op[0] === 6 && _.label < t[1]) { _.label = t[1]; t = op; break; }
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+ if (t && _.label < t[2]) { _.label = t[2]; _.ops.push(op); break; }
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+ if (t[2]) _.ops.pop();
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+ _.trys.pop(); continue;
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+ }
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+ op = body.call(thisArg, _);
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+ } catch (e) { op = [6, e]; y = 0; } finally { f = t = 0; }
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+ if (op[0] & 5) throw op[1]; return { value: op[0] ? op[1] : void 0, done: true };
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+ }
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+ };
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+ var __read = (this && this.__read) || function (o, n) {
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+ var m = typeof Symbol === "function" && o[Symbol.iterator];
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+ if (!m) return o;
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+ var i = m.call(o), r, ar = [], e;
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+ try {
66
+ while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
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+ }
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+ catch (error) { e = { error: error }; }
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+ finally {
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+ try {
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+ if (r && !r.done && (m = i["return"])) m.call(i);
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+ }
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+ finally { if (e) throw e.error; }
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+ }
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+ return ar;
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+ };
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+ var __importDefault = (this && this.__importDefault) || function (mod) {
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+ return (mod && mod.__esModule) ? mod : { "default": mod };
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+ };
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+ Object.defineProperty(exports, "__esModule", { value: true });
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+ var react_1 = __importStar(require("react"));
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+ var mobx_react_1 = require("mobx-react");
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+ var util_1 = require("@jbrowse/core/util");
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+ var AssemblySelector_1 = __importDefault(require("@jbrowse/core/ui/AssemblySelector"));
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+ var ui_1 = require("@jbrowse/core/ui");
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+ var io_1 = require("@jbrowse/core/util/io");
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+ var material_1 = require("@mui/material");
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+ var mui_1 = require("tss-react/mui");
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+ var Close_1 = __importDefault(require("@mui/icons-material/Close"));
90
+ var Publish_1 = __importDefault(require("@mui/icons-material/Publish"));
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+ var useStyles = (0, mui_1.makeStyles)()(function () { return ({
42
92
  closeDialog: {
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- position: 'absolute',
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- right: 0,
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- top: 0
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+ position: 'absolute',
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+ right: 0,
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+ top: 0,
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  },
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  dialogContainer: {
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- margin: 15
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+ margin: 15,
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  },
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  flexItem: {
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- margin: 5
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- }
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- };
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- });
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-
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- function ImportBookmarks(_ref) {
57
- var model = _ref.model,
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- assemblyName = _ref.assemblyName;
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- var classes = useStyles();
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- var session = (0, _util.getSession)(model);
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- var assemblyNames = session.assemblyNames;
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-
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- var _useState = (0, _react.useState)(false),
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- _useState2 = (0, _slicedToArray2.default)(_useState, 2),
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- dialogOpen = _useState2[0],
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- setDialogOpen = _useState2[1];
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-
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- var _useState3 = (0, _react.useState)(),
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- _useState4 = (0, _slicedToArray2.default)(_useState3, 2),
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- location = _useState4[0],
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- setLocation = _useState4[1];
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-
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- var _useState5 = (0, _react.useState)(),
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- _useState6 = (0, _slicedToArray2.default)(_useState5, 2),
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- error = _useState6[0],
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- setError = _useState6[1];
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-
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- var _useState7 = (0, _react.useState)(assemblyName || assemblyNames[0]),
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- _useState8 = (0, _slicedToArray2.default)(_useState7, 2),
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- selectedAsm = _useState8[0],
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- setSelectedAsm = _useState8[1];
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-
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- return /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, /*#__PURE__*/_react.default.createElement(_core.Button, {
84
- startIcon: /*#__PURE__*/_react.default.createElement(_Publish.default, null),
85
- onClick: function onClick() {
86
- return setDialogOpen(true);
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- }
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- }, "Import"), /*#__PURE__*/_react.default.createElement(_core.Dialog, {
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- open: dialogOpen,
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- onClose: function onClose() {
91
- return setDialogOpen(false);
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- },
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- maxWidth: "xl"
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- }, /*#__PURE__*/_react.default.createElement(_core.DialogTitle, null, "Import bookmarks", /*#__PURE__*/_react.default.createElement(_core.IconButton, {
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- className: classes.closeDialog,
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- "aria-label": "close-dialog",
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- onClick: function onClick() {
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- return setDialogOpen(false);
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- }
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- }, /*#__PURE__*/_react.default.createElement(_Close.default, null))), /*#__PURE__*/_react.default.createElement(_core.DialogContent, null, /*#__PURE__*/_react.default.createElement(_core.Typography, null, "Choose a BED format file to import. The first 4 columns will be used"), /*#__PURE__*/_react.default.createElement(_ui.FileSelector, {
101
- location: location,
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- setLocation: setLocation,
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- name: "File"
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- }), /*#__PURE__*/_react.default.createElement(_core.Typography, null, "Select assembly that your data belongs to"), /*#__PURE__*/_react.default.createElement(_AssemblySelector.default, {
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- onChange: function onChange(val) {
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- return setSelectedAsm(val);
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+ margin: 5,
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  },
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- session: session,
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- selected: selectedAsm
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- }), error ? /*#__PURE__*/_react.default.createElement(_core.Typography, {
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- color: "error",
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- variant: "h6"
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- }, "".concat(error)) : null), /*#__PURE__*/_react.default.createElement(_core.DialogActions, null, /*#__PURE__*/_react.default.createElement(_core.Button, {
114
- variant: "contained",
115
- color: "secondary",
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- onClick: function onClick() {
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- return setDialogOpen(false);
118
- }
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- }, "Cancel"), /*#__PURE__*/_react.default.createElement(_core.Button, {
120
- className: classes.flexItem,
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- "data-testid": "dialogImport",
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- variant: "contained",
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- color: "primary",
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- disabled: !location,
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- startIcon: /*#__PURE__*/_react.default.createElement(_Publish.default, null),
126
- onClick: /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
127
- var data, regions;
128
- return _regenerator.default.wrap(function _callee$(_context) {
129
- while (1) {
130
- switch (_context.prev = _context.next) {
131
- case 0:
132
- _context.prev = 0;
133
-
134
- if (location) {
135
- _context.next = 3;
136
- break;
137
- }
138
-
139
- return _context.abrupt("return");
140
-
141
- case 3:
142
- _context.next = 5;
143
- return (0, _io.openLocation)(location).readFile('utf8');
144
-
145
- case 5:
146
- data = _context.sent;
147
- regions = data.split('\n').filter(function (f) {
148
- return !!f.trim();
149
- }).filter(function (f) {
150
- return !f.startsWith('#') && !f.startsWith('track') && !f.startsWith('browser');
151
- }).map(function (line) {
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- var _line$split = line.split('\t'),
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- _line$split2 = (0, _slicedToArray2.default)(_line$split, 4),
154
- refName = _line$split2[0],
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- start = _line$split2[1],
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- end = _line$split2[2],
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- name = _line$split2[3];
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-
159
- return {
160
- assemblyName: selectedAsm,
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- refName: refName,
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- start: +start,
163
- end: +end,
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- label: name === '.' ? undefined : name
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- };
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- });
167
- model.importBookmarks(regions);
168
- setDialogOpen(false);
169
- _context.next = 15;
170
- break;
171
-
172
- case 11:
173
- _context.prev = 11;
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- _context.t0 = _context["catch"](0);
175
- console.error(_context.t0);
176
- setError(_context.t0);
177
-
178
- case 15:
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- case "end":
180
- return _context.stop();
181
- }
182
- }
183
- }, _callee, null, [[0, 11]]);
184
- }))
185
- }, "Import"))));
103
+ }); });
104
+ function ImportBookmarks(_a) {
105
+ var _this = this;
106
+ var model = _a.model, assemblyName = _a.assemblyName;
107
+ var classes = useStyles().classes;
108
+ var session = (0, util_1.getSession)(model);
109
+ var assemblyNames = session.assemblyNames;
110
+ var _b = __read((0, react_1.useState)(false), 2), dialogOpen = _b[0], setDialogOpen = _b[1];
111
+ var _c = __read((0, react_1.useState)(), 2), location = _c[0], setLocation = _c[1];
112
+ var _d = __read((0, react_1.useState)(), 2), error = _d[0], setError = _d[1];
113
+ var _e = __read((0, react_1.useState)(assemblyName || assemblyNames[0]), 2), selectedAsm = _e[0], setSelectedAsm = _e[1];
114
+ return (react_1.default.createElement(react_1.default.Fragment, null,
115
+ react_1.default.createElement(material_1.Button, { startIcon: react_1.default.createElement(Publish_1.default, null), onClick: function () { return setDialogOpen(true); } }, "Import"),
116
+ react_1.default.createElement(material_1.Dialog, { open: dialogOpen, onClose: function () { return setDialogOpen(false); }, maxWidth: "xl" },
117
+ react_1.default.createElement(material_1.DialogTitle, null,
118
+ "Import bookmarks",
119
+ react_1.default.createElement(material_1.IconButton, { className: classes.closeDialog, "aria-label": "close-dialog", onClick: function () { return setDialogOpen(false); } },
120
+ react_1.default.createElement(Close_1.default, null))),
121
+ react_1.default.createElement(material_1.DialogContent, null,
122
+ react_1.default.createElement(material_1.Typography, null, "Choose a BED format file to import. The first 4 columns will be used"),
123
+ react_1.default.createElement(ui_1.FileSelector, { location: location, setLocation: setLocation, name: "File" }),
124
+ react_1.default.createElement(material_1.Typography, null, "Select assembly that your data belongs to"),
125
+ react_1.default.createElement(AssemblySelector_1.default, { onChange: function (val) { return setSelectedAsm(val); }, session: session, selected: selectedAsm }),
126
+ error ? (react_1.default.createElement(material_1.Typography, { color: "error", variant: "h6" }, "".concat(error))) : null),
127
+ react_1.default.createElement(material_1.DialogActions, null,
128
+ react_1.default.createElement(material_1.Button, { variant: "contained", color: "secondary", onClick: function () { return setDialogOpen(false); } }, "Cancel"),
129
+ react_1.default.createElement(material_1.Button, { className: classes.flexItem, "data-testid": "dialogImport", variant: "contained", color: "primary", disabled: !location, startIcon: react_1.default.createElement(Publish_1.default, null), onClick: function () { return __awaiter(_this, void 0, void 0, function () {
130
+ var data, regions, e_1;
131
+ return __generator(this, function (_a) {
132
+ switch (_a.label) {
133
+ case 0:
134
+ _a.trys.push([0, 2, , 3]);
135
+ if (!location) {
136
+ return [2 /*return*/];
137
+ }
138
+ return [4 /*yield*/, (0, io_1.openLocation)(location).readFile('utf8')];
139
+ case 1:
140
+ data = _a.sent();
141
+ regions = data
142
+ .split('\n')
143
+ .filter(function (f) { return !!f.trim(); })
144
+ .filter(function (f) {
145
+ return !f.startsWith('#') &&
146
+ !f.startsWith('track') &&
147
+ !f.startsWith('browser');
148
+ })
149
+ .map(function (line) {
150
+ var _a = __read(line.split('\t'), 4), refName = _a[0], start = _a[1], end = _a[2], name = _a[3];
151
+ return {
152
+ assemblyName: selectedAsm,
153
+ refName: refName,
154
+ start: +start,
155
+ end: +end,
156
+ label: name === '.' ? undefined : name,
157
+ };
158
+ });
159
+ model.importBookmarks(regions);
160
+ setDialogOpen(false);
161
+ return [3 /*break*/, 3];
162
+ case 2:
163
+ e_1 = _a.sent();
164
+ console.error(e_1);
165
+ setError(e_1);
166
+ return [3 /*break*/, 3];
167
+ case 3: return [2 /*return*/];
168
+ }
169
+ });
170
+ }); } }, "Import")))));
186
171
  }
187
-
188
- var _default = (0, _mobxReact.observer)(ImportBookmarks);
189
-
190
- exports.default = _default;
172
+ exports.default = (0, mobx_react_1.observer)(ImportBookmarks);
173
+ //# sourceMappingURL=ImportBookmarks.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"ImportBookmarks.js","sourceRoot":"","sources":["../../../src/GridBookmarkWidget/components/ImportBookmarks.tsx"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,6CAAuC;AACvC,yCAAqC;AACrC,2CAA+C;AAC/C,uFAAgE;AAEhE,uCAA+C;AAC/C,4CAAoD;AACpD,0CAQsB;AACtB,qCAA0C;AAC1C,oEAAiD;AACjD,wEAAoD;AAGpD,IAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,cAAM,OAAA,CAAC;IACpC,WAAW,EAAE;QACX,QAAQ,EAAE,UAAU;QACpB,KAAK,EAAE,CAAC;QACR,GAAG,EAAE,CAAC;KACP;IACD,eAAe,EAAE;QACf,MAAM,EAAE,EAAE;KACX;IACD,QAAQ,EAAE;QACR,MAAM,EAAE,CAAC;KACV;CACF,CAAC,EAZmC,CAYnC,CAAC,CAAA;AAEH,SAAS,eAAe,CAAC,EAMxB;IAND,iBA+GC;QA9GC,KAAK,WAAA,EACL,YAAY,kBAAA;IAKJ,IAAA,OAAO,GAAK,SAAS,EAAE,QAAhB,CAAgB;IAC/B,IAAM,OAAO,GAAG,IAAA,iBAAU,EAAC,KAAK,CAAC,CAAA;IACzB,IAAA,aAAa,GAAK,OAAO,cAAZ,CAAY;IAC3B,IAAA,KAAA,OAA8B,IAAA,gBAAQ,EAAC,KAAK,CAAC,IAAA,EAA5C,UAAU,QAAA,EAAE,aAAa,QAAmB,CAAA;IAC7C,IAAA,KAAA,OAA0B,IAAA,gBAAQ,GAAgB,IAAA,EAAjD,QAAQ,QAAA,EAAE,WAAW,QAA4B,CAAA;IAClD,IAAA,KAAA,OAAoB,IAAA,gBAAQ,GAAW,IAAA,EAAtC,KAAK,QAAA,EAAE,QAAQ,QAAuB,CAAA;IACvC,IAAA,KAAA,OAAgC,IAAA,gBAAQ,EAC5C,YAAY,IAAI,aAAa,CAAC,CAAC,CAAC,CACjC,IAAA,EAFM,WAAW,QAAA,EAAE,cAAc,QAEjC,CAAA;IAED,OAAO,CACL;QACE,8BAAC,iBAAM,IAAC,SAAS,EAAE,8BAAC,iBAAU,OAAG,EAAE,OAAO,EAAE,cAAM,OAAA,aAAa,CAAC,IAAI,CAAC,EAAnB,CAAmB,aAE5D;QACT,8BAAC,iBAAM,IACL,IAAI,EAAE,UAAU,EAChB,OAAO,EAAE,cAAM,OAAA,aAAa,CAAC,KAAK,CAAC,EAApB,CAAoB,EACnC,QAAQ,EAAC,IAAI;YAEb,8BAAC,sBAAW;;gBAEV,8BAAC,qBAAU,IACT,SAAS,EAAE,OAAO,CAAC,WAAW,gBACnB,cAAc,EACzB,OAAO,EAAE,cAAM,OAAA,aAAa,CAAC,KAAK,CAAC,EAApB,CAAoB;oBAEnC,8BAAC,eAAS,OAAG,CACF,CACD;YACd,8BAAC,wBAAa;gBACZ,8BAAC,qBAAU,+EAEE;gBAEb,8BAAC,iBAAY,IACX,QAAQ,EAAE,QAAQ,EAClB,WAAW,EAAE,WAAW,EACxB,IAAI,EAAC,MAAM,GACX;gBACF,8BAAC,qBAAU,oDAAuD;gBAClE,8BAAC,0BAAgB,IACf,QAAQ,EAAE,UAAA,GAAG,IAAI,OAAA,cAAc,CAAC,GAAG,CAAC,EAAnB,CAAmB,EACpC,OAAO,EAAE,OAAO,EAChB,QAAQ,EAAE,WAAW,GACrB;gBACD,KAAK,CAAC,CAAC,CAAC,CACP,8BAAC,qBAAU,IAAC,KAAK,EAAC,OAAO,EAAC,OAAO,EAAC,IAAI,IAAE,UAAG,KAAK,CAAE,CAAc,CACjE,CAAC,CAAC,CAAC,IAAI,CACM;YAChB,8BAAC,wBAAa;gBACZ,8BAAC,iBAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,WAAW,EACjB,OAAO,EAAE,cAAM,OAAA,aAAa,CAAC,KAAK,CAAC,EAApB,CAAoB,aAG5B;gBACT,8BAAC,iBAAM,IACL,SAAS,EAAE,OAAO,CAAC,QAAQ,iBACf,cAAc,EAC1B,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,QAAQ,EAAE,CAAC,QAAQ,EACnB,SAAS,EAAE,8BAAC,iBAAU,OAAG,EACzB,OAAO,EAAE;;;;;;oCAEL,IAAI,CAAC,QAAQ,EAAE;wCACb,sBAAM;qCACP;oCACY,qBAAM,IAAA,iBAAY,EAAC,QAAQ,CAAC,CAAC,QAAQ,CAAC,MAAM,CAAC,EAAA;;oCAApD,IAAI,GAAG,SAA6C;oCACpD,OAAO,GAAG,IAAI;yCACjB,KAAK,CAAC,IAAI,CAAC;yCACX,MAAM,CAAC,UAAA,CAAC,IAAI,OAAA,CAAC,CAAC,CAAC,CAAC,IAAI,EAAE,EAAV,CAAU,CAAC;yCACvB,MAAM,CACL,UAAA,CAAC;wCACC,OAAA,CAAC,CAAC,CAAC,UAAU,CAAC,GAAG,CAAC;4CAClB,CAAC,CAAC,CAAC,UAAU,CAAC,OAAO,CAAC;4CACtB,CAAC,CAAC,CAAC,UAAU,CAAC,SAAS,CAAC;oCAFxB,CAEwB,CAC3B;yCACA,GAAG,CAAC,UAAA,IAAI;wCACD,IAAA,KAAA,OAA8B,IAAI,CAAC,KAAK,CAAC,IAAI,CAAC,IAAA,EAA7C,OAAO,QAAA,EAAE,KAAK,QAAA,EAAE,GAAG,QAAA,EAAE,IAAI,QAAoB,CAAA;wCACpD,OAAO;4CACL,YAAY,EAAE,WAAW;4CACzB,OAAO,SAAA;4CACP,KAAK,EAAE,CAAC,KAAK;4CACb,GAAG,EAAE,CAAC,GAAG;4CACT,KAAK,EAAE,IAAI,KAAK,GAAG,CAAC,CAAC,CAAC,SAAS,CAAC,CAAC,CAAC,IAAI;yCACvC,CAAA;oCACH,CAAC,CAAC,CAAA;oCACJ,KAAK,CAAC,eAAe,CAAC,OAAO,CAAC,CAAA;oCAC9B,aAAa,CAAC,KAAK,CAAC,CAAA;;;;oCAEpB,OAAO,CAAC,KAAK,CAAC,GAAC,CAAC,CAAA;oCAChB,QAAQ,CAAC,GAAC,CAAC,CAAA;;;;;yBAEd,aAGM,CACK,CACT,CACR,CACJ,CAAA;AACH,CAAC;AAED,kBAAe,IAAA,qBAAQ,EAAC,eAAe,CAAC,CAAA"}
@@ -1,3 +1,2 @@
1
- export { default as ReactComponent } from "./components/GridBookmarkWidget";
2
1
  export { default as stateModelFactory } from "./model";
3
2
  export const configSchema: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
@@ -1,29 +1,11 @@
1
1
  "use strict";
2
-
3
- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
4
-
5
- Object.defineProperty(exports, "__esModule", {
6
- value: true
7
- });
8
- Object.defineProperty(exports, "ReactComponent", {
9
- enumerable: true,
10
- get: function get() {
11
- return _GridBookmarkWidget.default;
12
- }
13
- });
14
- exports.configSchema = void 0;
15
- Object.defineProperty(exports, "stateModelFactory", {
16
- enumerable: true,
17
- get: function get() {
18
- return _model.default;
19
- }
20
- });
21
-
22
- var _configuration = require("@jbrowse/core/configuration");
23
-
24
- var _GridBookmarkWidget = _interopRequireDefault(require("./components/GridBookmarkWidget"));
25
-
26
- var _model = _interopRequireDefault(require("./model"));
27
-
28
- var configSchema = (0, _configuration.ConfigurationSchema)('GridBookmarkWidget', {});
29
- exports.configSchema = configSchema;
2
+ var __importDefault = (this && this.__importDefault) || function (mod) {
3
+ return (mod && mod.__esModule) ? mod : { "default": mod };
4
+ };
5
+ Object.defineProperty(exports, "__esModule", { value: true });
6
+ exports.configSchema = exports.stateModelFactory = void 0;
7
+ var configuration_1 = require("@jbrowse/core/configuration");
8
+ var model_1 = require("./model");
9
+ Object.defineProperty(exports, "stateModelFactory", { enumerable: true, get: function () { return __importDefault(model_1).default; } });
10
+ exports.configSchema = (0, configuration_1.ConfigurationSchema)('GridBookmarkWidget', {});
11
+ //# sourceMappingURL=index.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/index.js"],"names":[],"mappings":";;;;;;AAAA,6DAAiE;AACjE,iCAAsD;AAA7C,2HAAA,OAAO,OAAqB;AACxB,QAAA,YAAY,GAAG,IAAA,mCAAmB,EAAC,oBAAoB,EAAE,EAAE,CAAC,CAAA"}
@@ -1,70 +1,80 @@
1
1
  "use strict";
2
-
3
- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
4
-
5
- Object.defineProperty(exports, "__esModule", {
6
- value: true
7
- });
8
- exports.default = f;
9
-
10
- var _toConsumableArray2 = _interopRequireDefault(require("@babel/runtime/helpers/toConsumableArray"));
11
-
12
- var _mobxStateTree = require("mobx-state-tree");
13
-
14
- var _mst = require("@jbrowse/core/util/types/mst");
15
-
16
- var LabeledRegionModel = _mobxStateTree.types.compose(_mst.Region, _mobxStateTree.types.model('Label', {
17
- label: _mobxStateTree.types.optional(_mobxStateTree.types.string, '')
18
- })).actions(function (self) {
19
- return {
20
- setLabel: function setLabel(label) {
21
- self.label = label;
2
+ var __read = (this && this.__read) || function (o, n) {
3
+ var m = typeof Symbol === "function" && o[Symbol.iterator];
4
+ if (!m) return o;
5
+ var i = m.call(o), r, ar = [], e;
6
+ try {
7
+ while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
8
+ }
9
+ catch (error) { e = { error: error }; }
10
+ finally {
11
+ try {
12
+ if (r && !r.done && (m = i["return"])) m.call(i);
13
+ }
14
+ finally { if (e) throw e.error; }
22
15
  }
23
- };
24
- });
25
-
16
+ return ar;
17
+ };
18
+ var __spreadArray = (this && this.__spreadArray) || function (to, from, pack) {
19
+ if (pack || arguments.length === 2) for (var i = 0, l = from.length, ar; i < l; i++) {
20
+ if (ar || !(i in from)) {
21
+ if (!ar) ar = Array.prototype.slice.call(from, 0, i);
22
+ ar[i] = from[i];
23
+ }
24
+ }
25
+ return to.concat(ar || Array.prototype.slice.call(from));
26
+ };
27
+ Object.defineProperty(exports, "__esModule", { value: true });
28
+ var mobx_state_tree_1 = require("mobx-state-tree");
29
+ var mst_1 = require("@jbrowse/core/util/types/mst");
30
+ var LabeledRegionModel = mobx_state_tree_1.types
31
+ .compose(mst_1.Region, mobx_state_tree_1.types.model('Label', { label: mobx_state_tree_1.types.optional(mobx_state_tree_1.types.string, '') }))
32
+ .actions(function (self) { return ({
33
+ setLabel: function (label) {
34
+ self.label = label;
35
+ },
36
+ }); });
26
37
  function f(pluginManager) {
27
- return _mobxStateTree.types.model('GridBookmarkModel', {
28
- id: _mst.ElementId,
29
- type: _mobxStateTree.types.literal('GridBookmarkWidget'),
30
- view: _mobxStateTree.types.safeReference(pluginManager.pluggableMstType('view', 'stateModel')),
31
- bookmarkedRegions: _mobxStateTree.types.array(LabeledRegionModel),
32
- modelSelectedAssembly: ''
33
- }).actions(function (self) {
34
- return {
35
- importBookmarks: function importBookmarks(regions) {
36
- self.bookmarkedRegions = (0, _mobxStateTree.cast)(self.bookmarkedRegions.concat(regions));
37
- },
38
- addBookmark: function addBookmark(region) {
39
- self.bookmarkedRegions.push(region);
40
- },
41
- removeBookmark: function removeBookmark(index) {
42
- self.bookmarkedRegions.splice(index, 1);
43
- },
44
- clearAllBookmarks: function clearAllBookmarks() {
45
- self.bookmarkedRegions.clear();
46
- },
47
- updateBookmarkLabel: function updateBookmarkLabel(index, label) {
48
- var _self$bookmarkedRegio;
49
-
50
- (_self$bookmarkedRegio = self.bookmarkedRegions[index]) === null || _self$bookmarkedRegio === void 0 ? void 0 : _self$bookmarkedRegio.setLabel(label);
51
- },
52
- setSelectedAssembly: function setSelectedAssembly(assembly) {
53
- self.modelSelectedAssembly = assembly;
54
- }
55
- };
56
- }).views(function (self) {
57
- return {
58
- get selectedAssembly() {
59
- return self.modelSelectedAssembly || (self.bookmarkedRegions.length ? self.bookmarkedRegions[0].assemblyName : '');
60
- },
61
-
62
- get assemblies() {
63
- return (0, _toConsumableArray2.default)(new Set(self.bookmarkedRegions.map(function (region) {
64
- return region.assemblyName;
65
- })));
66
- }
67
-
68
- };
69
- });
70
- }
38
+ return mobx_state_tree_1.types
39
+ .model('GridBookmarkModel', {
40
+ id: mst_1.ElementId,
41
+ type: mobx_state_tree_1.types.literal('GridBookmarkWidget'),
42
+ view: mobx_state_tree_1.types.safeReference(pluginManager.pluggableMstType('view', 'stateModel')),
43
+ bookmarkedRegions: mobx_state_tree_1.types.array(LabeledRegionModel),
44
+ modelSelectedAssembly: '',
45
+ })
46
+ .actions(function (self) { return ({
47
+ importBookmarks: function (regions) {
48
+ self.bookmarkedRegions = (0, mobx_state_tree_1.cast)(self.bookmarkedRegions.concat(regions));
49
+ },
50
+ addBookmark: function (region) {
51
+ self.bookmarkedRegions.push(region);
52
+ },
53
+ removeBookmark: function (index) {
54
+ self.bookmarkedRegions.splice(index, 1);
55
+ },
56
+ clearAllBookmarks: function () {
57
+ self.bookmarkedRegions.clear();
58
+ },
59
+ updateBookmarkLabel: function (index, label) {
60
+ var _a;
61
+ (_a = self.bookmarkedRegions[index]) === null || _a === void 0 ? void 0 : _a.setLabel(label);
62
+ },
63
+ setSelectedAssembly: function (assembly) {
64
+ self.modelSelectedAssembly = assembly;
65
+ },
66
+ }); })
67
+ .views(function (self) { return ({
68
+ get selectedAssembly() {
69
+ return (self.modelSelectedAssembly ||
70
+ (self.bookmarkedRegions.length
71
+ ? self.bookmarkedRegions[0].assemblyName
72
+ : ''));
73
+ },
74
+ get assemblies() {
75
+ return __spreadArray([], __read(new Set(self.bookmarkedRegions.map(function (region) { return region.assemblyName; }))), false);
76
+ },
77
+ }); });
78
+ }
79
+ exports.default = f;
80
+ //# sourceMappingURL=model.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/model.ts"],"names":[],"mappings":";;;;;;;;;;;;;;;;;;;;;;;;;;;AAAA,mDAAuD;AAGvD,oDAA+E;AAE/E,IAAM,kBAAkB,GAAG,uBAAK;KAC7B,OAAO,CACN,YAAW,EACX,uBAAK,CAAC,KAAK,CAAC,OAAO,EAAE,EAAE,KAAK,EAAE,uBAAK,CAAC,QAAQ,CAAC,uBAAK,CAAC,MAAM,EAAE,EAAE,CAAC,EAAE,CAAC,CAClE;KACA,OAAO,CAAC,UAAA,IAAI,IAAI,OAAA,CAAC;IAChB,QAAQ,EAAR,UAAS,KAAa;QACpB,IAAI,CAAC,KAAK,GAAG,KAAK,CAAA;IACpB,CAAC;CACF,CAAC,EAJe,CAIf,CAAC,CAAA;AAEL,SAAwB,CAAC,CAAC,aAA4B;IACpD,OAAO,uBAAK;SACT,KAAK,CAAC,mBAAmB,EAAE;QAC1B,EAAE,EAAE,eAAS;QACb,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,oBAAoB,CAAC;QACzC,IAAI,EAAE,uBAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;QACD,iBAAiB,EAAE,uBAAK,CAAC,KAAK,CAAC,kBAAkB,CAAC;QAClD,qBAAqB,EAAE,EAAE;KAC1B,CAAC;SACD,OAAO,CAAC,UAAA,IAAI,IAAI,OAAA,CAAC;QAChB,eAAe,EAAf,UAAgB,OAAiB;YAC/B,IAAI,CAAC,iBAAiB,GAAG,IAAA,sBAAI,EAAC,IAAI,CAAC,iBAAiB,CAAC,MAAM,CAAC,OAAO,CAAC,CAAC,CAAA;QACvE,CAAC;QACD,WAAW,EAAX,UAAY,MAAc;YACxB,IAAI,CAAC,iBAAiB,CAAC,IAAI,CAAC,MAAM,CAAC,CAAA;QACrC,CAAC;QACD,cAAc,EAAd,UAAe,KAAa;YAC1B,IAAI,CAAC,iBAAiB,CAAC,MAAM,CAAC,KAAK,EAAE,CAAC,CAAC,CAAA;QACzC,CAAC;QACD,iBAAiB;YACf,IAAI,CAAC,iBAAiB,CAAC,KAAK,EAAE,CAAA;QAChC,CAAC;QACD,mBAAmB,EAAnB,UAAoB,KAAa,EAAE,KAAa;;YAC9C,MAAA,IAAI,CAAC,iBAAiB,CAAC,KAAK,CAAC,0CAAE,QAAQ,CAAC,KAAK,CAAC,CAAA;QAChD,CAAC;QACD,mBAAmB,EAAnB,UAAoB,QAAgB;YAClC,IAAI,CAAC,qBAAqB,GAAG,QAAQ,CAAA;QACvC,CAAC;KACF,CAAC,EAnBe,CAmBf,CAAC;SACF,KAAK,CAAC,UAAA,IAAI,IAAI,OAAA,CAAC;QACd,IAAI,gBAAgB;YAClB,OAAO,CACL,IAAI,CAAC,qBAAqB;gBAC1B,CAAC,IAAI,CAAC,iBAAiB,CAAC,MAAM;oBAC5B,CAAC,CAAC,IAAI,CAAC,iBAAiB,CAAC,CAAC,CAAC,CAAC,YAAY;oBACxC,CAAC,CAAC,EAAE,CAAC,CACR,CAAA;QACH,CAAC;QACD,IAAI,UAAU;YACZ,gCACK,IAAI,GAAG,CAAC,IAAI,CAAC,iBAAiB,CAAC,GAAG,CAAC,UAAA,MAAM,IAAI,OAAA,MAAM,CAAC,YAAY,EAAnB,CAAmB,CAAC,CAAC,UACtE;QACH,CAAC;KACF,CAAC,EAda,CAcb,CAAC,CAAA;AACP,CAAC;AA9CD,oBA8CC"}
@@ -1,5 +1,3 @@
1
1
  "use strict";
2
-
3
- Object.defineProperty(exports, "__esModule", {
4
- value: true
5
- });
2
+ Object.defineProperty(exports, "__esModule", { value: true });
3
+ //# sourceMappingURL=types.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"types.js","sourceRoot":"","sources":["../../src/GridBookmarkWidget/types.ts"],"names":[],"mappings":""}