@jbrowse/plugin-gff3 2.11.2 → 2.12.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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@@ -6,7 +6,7 @@ export default class Gff3Adapter extends BaseFeatureDataAdapter {
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calculatedIntervalTreeMap: Record<string, IntervalTree>;
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protected gffFeatures?: Promise<{
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header: string;
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-
intervalTreeMap: Record<string, (sc?: (arg: string) => void) => IntervalTree>;
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intervalTreeMap: Record<string, ((sc?: (arg: string) => void) => IntervalTree) | undefined>;
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}>;
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private loadDataP;
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private loadData;
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@@ -102,11 +102,11 @@ class Gff3Adapter extends BaseAdapter_1.BaseFeatureDataAdapter {
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}
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getFeatures(query, opts = {}) {
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return (0, rxjs_1.ObservableCreate)(async (observer) => {
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var _a;
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var _a, _b;
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try {
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const { start, end, refName } = query;
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const { intervalTreeMap } = await this.loadData(opts);
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-
(_a = intervalTreeMap[refName](opts.statusCallback)) === null ||
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(_b = (_a = intervalTreeMap[refName]) === null || _a === void 0 ? void 0 : _a.call(intervalTreeMap, opts.statusCallback)) === null || _b === void 0 ? void 0 : _b.search([start, end]).forEach(f => observer.next(f));
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observer.complete();
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}
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catch (e) {
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@@ -6,7 +6,7 @@ export default class Gff3Adapter extends BaseFeatureDataAdapter {
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calculatedIntervalTreeMap: Record<string, IntervalTree>;
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protected gffFeatures?: Promise<{
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header: string;
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-
intervalTreeMap: Record<string, (sc?: (arg: string) => void) => IntervalTree>;
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9
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+
intervalTreeMap: Record<string, ((sc?: (arg: string) => void) => IntervalTree) | undefined>;
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}>;
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private loadDataP;
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private loadData;
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@@ -97,11 +97,11 @@ export default class Gff3Adapter extends BaseFeatureDataAdapter {
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}
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getFeatures(query, opts = {}) {
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return ObservableCreate(async (observer) => {
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-
var _a;
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+
var _a, _b;
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try {
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const { start, end, refName } = query;
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const { intervalTreeMap } = await this.loadData(opts);
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104
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-
(_a = intervalTreeMap[refName](opts.statusCallback)) === null ||
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104
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(_b = (_a = intervalTreeMap[refName]) === null || _a === void 0 ? void 0 : _a.call(intervalTreeMap, opts.statusCallback)) === null || _b === void 0 ? void 0 : _b.search([start, end]).forEach(f => observer.next(f));
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observer.complete();
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}
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catch (e) {
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package/package.json
CHANGED
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@@ -1,6 +1,6 @@
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{
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"name": "@jbrowse/plugin-gff3",
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"version": "2.
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"version": "2.12.0",
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"description": "JBrowse 2 gff3.",
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"keywords": [
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"jbrowse",
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@@ -55,5 +55,5 @@
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"distModule": "esm/index.js",
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"srcModule": "src/index.ts",
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"module": "esm/index.js",
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-
"gitHead": "
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"gitHead": "935f2602d29abc737bb1f493a922b6218d023ae2"
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}
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