@jbrowse/plugin-gccontent 4.0.3 → 4.1.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
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@@ -156,6 +156,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & {
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@@ -212,6 +213,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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@@ -265,6 +267,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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@@ -546,6 +549,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & {
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@@ -602,6 +606,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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@@ -655,6 +660,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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@@ -881,6 +887,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & {
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@@ -937,6 +944,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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@@ -990,6 +998,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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@@ -1133,13 +1142,22 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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readonly minScore: number;
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} & {
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readonly adapterCapabilities: string[];
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readonly rendererConfig:
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readonly rendererConfig: {
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scaleType: string;
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filled: any;
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displayCrossHatches: any;
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summaryScoreMode: any;
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color: any;
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negColor: any;
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posColor: any;
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minSize: any;
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};
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readonly autoscaleType: string;
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} & {
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readonly domain: number[] | undefined;
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} & {
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readonly filled:
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readonly summaryScoreModeSetting:
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readonly filled: any;
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readonly summaryScoreModeSetting: any;
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readonly scaleOpts: {
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domain: number[] | undefined;
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stats: {
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@@ -1153,7 +1171,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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inverted: boolean;
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};
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readonly canHaveFill: boolean;
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readonly displayCrossHatchesSetting:
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readonly displayCrossHatchesSetting: any;
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readonly hasResolution: boolean;
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readonly hasGlobalStats: boolean;
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} & {
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@@ -1229,13 +1247,6 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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})[];
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})[];
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wiggleOnlyTrackMenuItems(): ({
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label: string;
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type: string;
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checked: boolean;
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onClick: () => void;
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subMenu?: undefined;
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icon?: undefined;
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} | {
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label: string;
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subMenu: {
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label: string;
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@@ -1243,27 +1254,14 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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checked: boolean;
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onClick: () => void;
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}[];
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type?: undefined;
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checked?: undefined;
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onClick?: undefined;
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icon?: undefined;
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onClick?: undefined;
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} | {
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label: string;
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icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
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muiName: string;
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};
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onClick: () => void;
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type?: undefined;
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checked?: undefined;
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subMenu?: undefined;
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} | {
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type: string;
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icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
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muiName: string;
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};
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label: string;
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checked: boolean;
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onClick: () => void;
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subMenu?: undefined;
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})[];
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} & {
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@@ -1293,13 +1291,6 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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onClick: () => void;
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subMenu?: undefined;
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})[];
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} | {
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label: string;
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type: string;
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checked: boolean;
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onClick: () => void;
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subMenu?: undefined;
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icon?: undefined;
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} | {
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label: string;
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subMenu: {
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@@ -1308,27 +1299,14 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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checked: boolean;
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onClick: () => void;
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}[];
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type?: undefined;
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checked?: undefined;
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onClick?: undefined;
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icon?: undefined;
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onClick?: undefined;
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} | {
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label: string;
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icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
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muiName: string;
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};
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onClick: () => void;
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type?: undefined;
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checked?: undefined;
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subMenu?: undefined;
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} | {
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type: string;
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icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
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muiName: string;
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};
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label: string;
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checked: boolean;
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onClick: () => void;
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subMenu?: undefined;
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} | {
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label: string;
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@@ -1338,7 +1316,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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subMenu: {
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label: string;
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type: string;
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checked:
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checked: any;
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onClick: () => void;
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}[];
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})[];
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@@ -158,6 +158,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & {
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@@ -214,6 +215,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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@@ -267,6 +269,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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@@ -548,6 +551,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & {
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@@ -604,6 +608,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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@@ -657,6 +662,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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@@ -883,6 +889,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & {
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@@ -939,6 +946,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
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@@ -992,6 +1000,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}> | null;
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readonly adapterConfig: any;
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readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
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readonly isMinimized: boolean;
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readonly parentDisplay: any;
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readonly effectiveRpcDriverName: any;
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}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
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@@ -1135,13 +1144,22 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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readonly minScore: number;
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} & {
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readonly adapterCapabilities: string[];
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readonly rendererConfig:
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readonly rendererConfig: {
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scaleType: string;
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filled: any;
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displayCrossHatches: any;
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summaryScoreMode: any;
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color: any;
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negColor: any;
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posColor: any;
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minSize: any;
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};
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readonly autoscaleType: string;
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} & {
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readonly domain: number[] | undefined;
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} & {
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readonly filled:
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readonly summaryScoreModeSetting:
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readonly filled: any;
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readonly summaryScoreModeSetting: any;
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readonly scaleOpts: {
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domain: number[] | undefined;
|
|
1147
1165
|
stats: {
|
|
@@ -1155,7 +1173,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1155
1173
|
inverted: boolean;
|
|
1156
1174
|
};
|
|
1157
1175
|
readonly canHaveFill: boolean;
|
|
1158
|
-
readonly displayCrossHatchesSetting:
|
|
1176
|
+
readonly displayCrossHatchesSetting: any;
|
|
1159
1177
|
readonly hasResolution: boolean;
|
|
1160
1178
|
readonly hasGlobalStats: boolean;
|
|
1161
1179
|
} & {
|
|
@@ -1231,13 +1249,6 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1231
1249
|
})[];
|
|
1232
1250
|
})[];
|
|
1233
1251
|
wiggleOnlyTrackMenuItems(): ({
|
|
1234
|
-
label: string;
|
|
1235
|
-
type: string;
|
|
1236
|
-
checked: boolean;
|
|
1237
|
-
onClick: () => void;
|
|
1238
|
-
subMenu?: undefined;
|
|
1239
|
-
icon?: undefined;
|
|
1240
|
-
} | {
|
|
1241
1252
|
label: string;
|
|
1242
1253
|
subMenu: {
|
|
1243
1254
|
label: string;
|
|
@@ -1245,27 +1256,14 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1245
1256
|
checked: boolean;
|
|
1246
1257
|
onClick: () => void;
|
|
1247
1258
|
}[];
|
|
1248
|
-
type?: undefined;
|
|
1249
|
-
checked?: undefined;
|
|
1250
|
-
onClick?: undefined;
|
|
1251
1259
|
icon?: undefined;
|
|
1260
|
+
onClick?: undefined;
|
|
1252
1261
|
} | {
|
|
1253
1262
|
label: string;
|
|
1254
1263
|
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
1255
1264
|
muiName: string;
|
|
1256
1265
|
};
|
|
1257
1266
|
onClick: () => void;
|
|
1258
|
-
type?: undefined;
|
|
1259
|
-
checked?: undefined;
|
|
1260
|
-
subMenu?: undefined;
|
|
1261
|
-
} | {
|
|
1262
|
-
type: string;
|
|
1263
|
-
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
1264
|
-
muiName: string;
|
|
1265
|
-
};
|
|
1266
|
-
label: string;
|
|
1267
|
-
checked: boolean;
|
|
1268
|
-
onClick: () => void;
|
|
1269
1267
|
subMenu?: undefined;
|
|
1270
1268
|
})[];
|
|
1271
1269
|
} & {
|
|
@@ -1295,13 +1293,6 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1295
1293
|
onClick: () => void;
|
|
1296
1294
|
subMenu?: undefined;
|
|
1297
1295
|
})[];
|
|
1298
|
-
} | {
|
|
1299
|
-
label: string;
|
|
1300
|
-
type: string;
|
|
1301
|
-
checked: boolean;
|
|
1302
|
-
onClick: () => void;
|
|
1303
|
-
subMenu?: undefined;
|
|
1304
|
-
icon?: undefined;
|
|
1305
1296
|
} | {
|
|
1306
1297
|
label: string;
|
|
1307
1298
|
subMenu: {
|
|
@@ -1310,27 +1301,14 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1310
1301
|
checked: boolean;
|
|
1311
1302
|
onClick: () => void;
|
|
1312
1303
|
}[];
|
|
1313
|
-
type?: undefined;
|
|
1314
|
-
checked?: undefined;
|
|
1315
|
-
onClick?: undefined;
|
|
1316
1304
|
icon?: undefined;
|
|
1305
|
+
onClick?: undefined;
|
|
1317
1306
|
} | {
|
|
1318
1307
|
label: string;
|
|
1319
1308
|
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
1320
1309
|
muiName: string;
|
|
1321
1310
|
};
|
|
1322
1311
|
onClick: () => void;
|
|
1323
|
-
type?: undefined;
|
|
1324
|
-
checked?: undefined;
|
|
1325
|
-
subMenu?: undefined;
|
|
1326
|
-
} | {
|
|
1327
|
-
type: string;
|
|
1328
|
-
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
1329
|
-
muiName: string;
|
|
1330
|
-
};
|
|
1331
|
-
label: string;
|
|
1332
|
-
checked: boolean;
|
|
1333
|
-
onClick: () => void;
|
|
1334
1312
|
subMenu?: undefined;
|
|
1335
1313
|
} | {
|
|
1336
1314
|
label: string;
|
|
@@ -1340,7 +1318,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1340
1318
|
subMenu: {
|
|
1341
1319
|
label: string;
|
|
1342
1320
|
type: string;
|
|
1343
|
-
checked:
|
|
1321
|
+
checked: any;
|
|
1344
1322
|
onClick: () => void;
|
|
1345
1323
|
}[];
|
|
1346
1324
|
})[];
|
|
@@ -158,6 +158,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
158
158
|
}> | null;
|
|
159
159
|
readonly adapterConfig: any;
|
|
160
160
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
161
|
+
readonly isMinimized: boolean;
|
|
161
162
|
readonly parentDisplay: any;
|
|
162
163
|
readonly effectiveRpcDriverName: any;
|
|
163
164
|
} & {
|
|
@@ -214,6 +215,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
214
215
|
}> | null;
|
|
215
216
|
readonly adapterConfig: any;
|
|
216
217
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
218
|
+
readonly isMinimized: boolean;
|
|
217
219
|
readonly parentDisplay: any;
|
|
218
220
|
readonly effectiveRpcDriverName: any;
|
|
219
221
|
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
@@ -267,6 +269,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
267
269
|
}> | null;
|
|
268
270
|
readonly adapterConfig: any;
|
|
269
271
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
272
|
+
readonly isMinimized: boolean;
|
|
270
273
|
readonly parentDisplay: any;
|
|
271
274
|
readonly effectiveRpcDriverName: any;
|
|
272
275
|
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
@@ -548,6 +551,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
548
551
|
}> | null;
|
|
549
552
|
readonly adapterConfig: any;
|
|
550
553
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
554
|
+
readonly isMinimized: boolean;
|
|
551
555
|
readonly parentDisplay: any;
|
|
552
556
|
readonly effectiveRpcDriverName: any;
|
|
553
557
|
} & {
|
|
@@ -604,6 +608,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
604
608
|
}> | null;
|
|
605
609
|
readonly adapterConfig: any;
|
|
606
610
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
611
|
+
readonly isMinimized: boolean;
|
|
607
612
|
readonly parentDisplay: any;
|
|
608
613
|
readonly effectiveRpcDriverName: any;
|
|
609
614
|
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
@@ -657,6 +662,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
657
662
|
}> | null;
|
|
658
663
|
readonly adapterConfig: any;
|
|
659
664
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
665
|
+
readonly isMinimized: boolean;
|
|
660
666
|
readonly parentDisplay: any;
|
|
661
667
|
readonly effectiveRpcDriverName: any;
|
|
662
668
|
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
@@ -883,6 +889,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
883
889
|
}> | null;
|
|
884
890
|
readonly adapterConfig: any;
|
|
885
891
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
892
|
+
readonly isMinimized: boolean;
|
|
886
893
|
readonly parentDisplay: any;
|
|
887
894
|
readonly effectiveRpcDriverName: any;
|
|
888
895
|
} & {
|
|
@@ -939,6 +946,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
939
946
|
}> | null;
|
|
940
947
|
readonly adapterConfig: any;
|
|
941
948
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
949
|
+
readonly isMinimized: boolean;
|
|
942
950
|
readonly parentDisplay: any;
|
|
943
951
|
readonly effectiveRpcDriverName: any;
|
|
944
952
|
} & import("@jbrowse/mobx-state-tree").IStateTreeNode<import("@jbrowse/mobx-state-tree").IModelType<{
|
|
@@ -992,6 +1000,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
992
1000
|
}> | null;
|
|
993
1001
|
readonly adapterConfig: any;
|
|
994
1002
|
readonly parentTrack: import("@jbrowse/core/util").AbstractTrackModel;
|
|
1003
|
+
readonly isMinimized: boolean;
|
|
995
1004
|
readonly parentDisplay: any;
|
|
996
1005
|
readonly effectiveRpcDriverName: any;
|
|
997
1006
|
}, import("@jbrowse/mobx-state-tree")._NotCustomized, import("@jbrowse/mobx-state-tree")._NotCustomized>>;
|
|
@@ -1135,13 +1144,22 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1135
1144
|
readonly minScore: number;
|
|
1136
1145
|
} & {
|
|
1137
1146
|
readonly adapterCapabilities: string[];
|
|
1138
|
-
readonly rendererConfig:
|
|
1147
|
+
readonly rendererConfig: {
|
|
1148
|
+
scaleType: string;
|
|
1149
|
+
filled: any;
|
|
1150
|
+
displayCrossHatches: any;
|
|
1151
|
+
summaryScoreMode: any;
|
|
1152
|
+
color: any;
|
|
1153
|
+
negColor: any;
|
|
1154
|
+
posColor: any;
|
|
1155
|
+
minSize: any;
|
|
1156
|
+
};
|
|
1139
1157
|
readonly autoscaleType: string;
|
|
1140
1158
|
} & {
|
|
1141
1159
|
readonly domain: number[] | undefined;
|
|
1142
1160
|
} & {
|
|
1143
|
-
readonly filled:
|
|
1144
|
-
readonly summaryScoreModeSetting:
|
|
1161
|
+
readonly filled: any;
|
|
1162
|
+
readonly summaryScoreModeSetting: any;
|
|
1145
1163
|
readonly scaleOpts: {
|
|
1146
1164
|
domain: number[] | undefined;
|
|
1147
1165
|
stats: {
|
|
@@ -1155,7 +1173,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1155
1173
|
inverted: boolean;
|
|
1156
1174
|
};
|
|
1157
1175
|
readonly canHaveFill: boolean;
|
|
1158
|
-
readonly displayCrossHatchesSetting:
|
|
1176
|
+
readonly displayCrossHatchesSetting: any;
|
|
1159
1177
|
readonly hasResolution: boolean;
|
|
1160
1178
|
readonly hasGlobalStats: boolean;
|
|
1161
1179
|
} & {
|
|
@@ -1231,13 +1249,6 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1231
1249
|
})[];
|
|
1232
1250
|
})[];
|
|
1233
1251
|
wiggleOnlyTrackMenuItems(): ({
|
|
1234
|
-
label: string;
|
|
1235
|
-
type: string;
|
|
1236
|
-
checked: boolean;
|
|
1237
|
-
onClick: () => void;
|
|
1238
|
-
subMenu?: undefined;
|
|
1239
|
-
icon?: undefined;
|
|
1240
|
-
} | {
|
|
1241
1252
|
label: string;
|
|
1242
1253
|
subMenu: {
|
|
1243
1254
|
label: string;
|
|
@@ -1245,27 +1256,14 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1245
1256
|
checked: boolean;
|
|
1246
1257
|
onClick: () => void;
|
|
1247
1258
|
}[];
|
|
1248
|
-
type?: undefined;
|
|
1249
|
-
checked?: undefined;
|
|
1250
|
-
onClick?: undefined;
|
|
1251
1259
|
icon?: undefined;
|
|
1260
|
+
onClick?: undefined;
|
|
1252
1261
|
} | {
|
|
1253
1262
|
label: string;
|
|
1254
1263
|
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
1255
1264
|
muiName: string;
|
|
1256
1265
|
};
|
|
1257
1266
|
onClick: () => void;
|
|
1258
|
-
type?: undefined;
|
|
1259
|
-
checked?: undefined;
|
|
1260
|
-
subMenu?: undefined;
|
|
1261
|
-
} | {
|
|
1262
|
-
type: string;
|
|
1263
|
-
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
1264
|
-
muiName: string;
|
|
1265
|
-
};
|
|
1266
|
-
label: string;
|
|
1267
|
-
checked: boolean;
|
|
1268
|
-
onClick: () => void;
|
|
1269
1267
|
subMenu?: undefined;
|
|
1270
1268
|
})[];
|
|
1271
1269
|
} & {
|
|
@@ -1295,13 +1293,6 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1295
1293
|
onClick: () => void;
|
|
1296
1294
|
subMenu?: undefined;
|
|
1297
1295
|
})[];
|
|
1298
|
-
} | {
|
|
1299
|
-
label: string;
|
|
1300
|
-
type: string;
|
|
1301
|
-
checked: boolean;
|
|
1302
|
-
onClick: () => void;
|
|
1303
|
-
subMenu?: undefined;
|
|
1304
|
-
icon?: undefined;
|
|
1305
1296
|
} | {
|
|
1306
1297
|
label: string;
|
|
1307
1298
|
subMenu: {
|
|
@@ -1310,27 +1301,14 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1310
1301
|
checked: boolean;
|
|
1311
1302
|
onClick: () => void;
|
|
1312
1303
|
}[];
|
|
1313
|
-
type?: undefined;
|
|
1314
|
-
checked?: undefined;
|
|
1315
|
-
onClick?: undefined;
|
|
1316
1304
|
icon?: undefined;
|
|
1305
|
+
onClick?: undefined;
|
|
1317
1306
|
} | {
|
|
1318
1307
|
label: string;
|
|
1319
1308
|
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
1320
1309
|
muiName: string;
|
|
1321
1310
|
};
|
|
1322
1311
|
onClick: () => void;
|
|
1323
|
-
type?: undefined;
|
|
1324
|
-
checked?: undefined;
|
|
1325
|
-
subMenu?: undefined;
|
|
1326
|
-
} | {
|
|
1327
|
-
type: string;
|
|
1328
|
-
icon: import("@mui/material/OverridableComponent").OverridableComponent<import("@mui/material").SvgIconTypeMap<{}, "svg">> & {
|
|
1329
|
-
muiName: string;
|
|
1330
|
-
};
|
|
1331
|
-
label: string;
|
|
1332
|
-
checked: boolean;
|
|
1333
|
-
onClick: () => void;
|
|
1334
1312
|
subMenu?: undefined;
|
|
1335
1313
|
} | {
|
|
1336
1314
|
label: string;
|
|
@@ -1340,7 +1318,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
1340
1318
|
subMenu: {
|
|
1341
1319
|
label: string;
|
|
1342
1320
|
type: string;
|
|
1343
|
-
checked:
|
|
1321
|
+
checked: any;
|
|
1344
1322
|
onClick: () => void;
|
|
1345
1323
|
}[];
|
|
1346
1324
|
})[];
|
package/package.json
CHANGED
|
@@ -1,6 +1,7 @@
|
|
|
1
1
|
{
|
|
2
2
|
"name": "@jbrowse/plugin-gccontent",
|
|
3
|
-
"version": "4.
|
|
3
|
+
"version": "4.1.1",
|
|
4
|
+
"type": "module",
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"description": "JBrowse 2 gccontent concepts",
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"keywords": [
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"jbrowse",
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@@ -21,14 +22,14 @@
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21
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],
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"dependencies": {
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"@jbrowse/mobx-state-tree": "^5.5.0",
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24
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-
"@mui/material": "^7.3.
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+
"@mui/material": "^7.3.7",
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"mobx": "^6.15.0",
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"mobx-react": "^9.2.1",
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"rxjs": "^7.8.2",
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-
"@jbrowse/core": "^4.
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-
"@jbrowse/plugin-linear-genome-view": "^4.
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-
"@jbrowse/plugin-sequence": "^4.
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-
"@jbrowse/plugin-wiggle": "^4.
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+
"@jbrowse/core": "^4.1.1",
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+
"@jbrowse/plugin-linear-genome-view": "^4.1.1",
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31
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+
"@jbrowse/plugin-sequence": "^4.1.1",
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+
"@jbrowse/plugin-wiggle": "^4.1.1"
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},
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"peerDependencies": {
|
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"react": ">=18.0.0"
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