@jbrowse/plugin-gccontent 2.4.2 → 2.6.1

package/dist/GCContentAdapter/GCContentAdapter.js

@@ -85,6 +85,6 @@ class default_1 extends BaseAdapter_1.BaseFeatureDataAdapter {
      */
     freeResources( /* { region } */) { }
 }
-exports.default = default_1;
 default_1.capabilities = ['hasLocalStats'];
+exports.default = default_1;
 //# sourceMappingURL=GCContentAdapter.js.map

package/dist/GCContentAdapter/GCContentAdapter.js.map

@@ -1 +1 @@
-{"version":3,"file":"GCContentAdapter.js","sourceRoot":"","sources":["../../src/GCContentAdapter/GCContentAdapter.ts"],"names":[],"mappings":";;AAAA,yEAGgD;AAChD,+BAAqC;AACrC,kDAA0D;AAC1D,6CAAmE;AACnE,8CAAwC;AAExC,eAAqB,SAAQ,oCAAsB;IAAnD;;QACU,eAAU,GAAG,IAAI,CAAA;QAEjB,gBAAW,GAAG,IAAI,CAAA;QAElB,WAAM,GAAG,SAAS,CAAA;IAqF5B,CAAC;IAjFQ,KAAK,CAAC,SAAS;;QACpB,MAAM,OAAO,GAAG,MAAM,CAAA,MAAA,IAAI,CAAC,aAAa,qDAAG,IAAI,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAC,CAAA,CAAA;QAC3E,IAAI,CAAC,OAAO,EAAE;YACZ,MAAM,IAAI,KAAK,CAAC,0BAA0B,CAAC,CAAA;SAC5C;QACD,OAAO,OAAO,CAAC,WAAqC,CAAA;IACtD,CAAC;IAEM,KAAK,CAAC,WAAW;QACtB,MAAM,OAAO,GAAG,MAAM,IAAI,CAAC,SAAS,EAAE,CAAA;QACtC,OAAO,OAAO,CAAC,WAAW,EAAE,CAAA;IAC9B,CAAC;IAEM,WAAW,CAAC,KAAa,EAAE,IAAiB;QACjD,OAAO,IAAA,uBAAgB,EAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;;YAChD,MAAM,eAAe,GAAG,MAAM,IAAI,CAAC,SAAS,EAAE,CAAA;YAC9C,MAAM,EAAE,GAAG,IAAI,CAAC,UAAU,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,GAAG,CAAC,CAAA,CAAC,uBAAuB;YAClF,MAAM,CAAC,GAAG,IAAI,CAAC,UAAU,KAAK,CAAC,CAAA;YAE/B,IAAI,EAAE,KAAK,EAAE,UAAU,EAAE,GAAG,EAAE,QAAQ,EAAE,GAAG,KAAK,CAAA;YAChD,UAAU,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,UAAU,GAAG,EAAE,CAAC,CAAA;YACzC,QAAQ,IAAI,EAAE,CAAA;YAEd,IAAI,QAAQ,GAAG,CAAC,IAAI,UAAU,GAAG,QAAQ,EAAE;gBACzC,QAAQ,CAAC,QAAQ,EAAE,CAAA;gBACnB,OAAM;aACP;YAED,MAAM,GAAG,GAAG,eAAe,CAAC,WAAW,CACrC;gBACE,GAAG,KAAK;gBACR,KAAK,EAAE,UAAU;gBACjB,GAAG,EAAE,QAAQ;aACd,EACD,IAAI,CACL,CAAA;YACD,MAAM,KAAK,GAAG,MAAM,IAAA,qBAAc,EAAC,GAAG,CAAC,IAAI,CAAC,IAAA,mBAAO,GAAE,CAAC,CAAC,CAAA;YACvD,MAAM,QAAQ,GAAG,CAAA,MAAA,KAAK,CAAC,CAAC,CAAC,0CAAE,GAAG,CAAC,KAAK,CAAC,KAAI,EAAE,CAAA;YAE3C,KAAK,IAAI,CAAC,GAAG,EAAE,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,GAAG,EAAE,EAAE,CAAC,IAAI,IAAI,CAAC,WAAW,EAAE;gBAChE,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,GAAG,EAAE,EAAE,CAAC,GAAG,EAAE,CAAC,CAAA;gBAC1D,IAAI,EAAE,GAAG,CAAC,CAAA;gBACV,IAAI,EAAE,GAAG,CAAC,CAAA;gBACV,IAAI,GAAG,GAAG,CAAC,CAAA;gBACX,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBACjC,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBAChC,EAAE,EAAE,CAAA;qBACL;yBAAM,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBACvC,EAAE,EAAE,CAAA;qBACL;oBACD,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBAChB,GAAG,EAAE,CAAA;qBACN;iBACF;gBACD,MAAM,GAAG,GAAG,UAAU,CAAA;gBACtB,IAAI,KAAK,CAAA;gBACT,IAAI,IAAI,CAAC,MAAM,KAAK,SAAS,EAAE;oBAC7B,KAAK,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,GAAG,IAAI,CAAC,CAAC,CAAA;iBAC/B;qBAAM,IAAI,IAAI,CAAC,MAAM,KAAK,MAAM,EAAE;oBACjC,KAAK,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC,CAAA;iBACnC;gBAED,QAAQ,CAAC,IAAI,CACX,IAAI,oBAAa,CAAC;oBAChB,QAAQ,EAAE,GAAG,IAAI,CAAC,EAAE,IAAI,GAAG,GAAG,CAAC,EAAE;oBACjC,KAAK,EAAE,GAAG,GAAG,CAAC;oBACd,GAAG,EAAE,GAAG,GAAG,CAAC,GAAG,IAAI,CAAC,WAAW;oBAC/B,KAAK;iBACN,CAAC,CACH,CAAA;aACF;YACD,QAAQ,CAAC,QAAQ,EAAE,CAAA;QACrB,CAAC,CAAC,CAAA;IACJ,CAAC;IAED;;;;OAIG;IACI,aAAa,EAAC,gBAAgB,IAAG,CAAC;;AAzF3C,4BA0FC;AAnFe,sBAAY,GAAG,CAAC,eAAe,CAAC,CAAA"}
+{"version":3,"file":"GCContentAdapter.js","sourceRoot":"","sources":["../../src/GCContentAdapter/GCContentAdapter.ts"],"names":[],"mappings":";;AAAA,yEAGgD;AAChD,+BAAqC;AACrC,kDAA0D;AAC1D,6CAAmE;AACnE,8CAAwC;AAExC,eAAqB,SAAQ,oCAAsB;IAAnD;;QACU,eAAU,GAAG,IAAI,CAAA;QAEjB,gBAAW,GAAG,IAAI,CAAA;QAElB,WAAM,GAAG,SAAS,CAAA;IAqF5B,CAAC;IAjFQ,KAAK,CAAC,SAAS;;QACpB,MAAM,OAAO,GAAG,MAAM,CAAA,MAAA,IAAI,CAAC,aAAa,qDAAG,IAAI,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAC,CAAA,CAAA;QAC3E,IAAI,CAAC,OAAO,EAAE;YACZ,MAAM,IAAI,KAAK,CAAC,0BAA0B,CAAC,CAAA;SAC5C;QACD,OAAO,OAAO,CAAC,WAAqC,CAAA;IACtD,CAAC;IAEM,KAAK,CAAC,WAAW;QACtB,MAAM,OAAO,GAAG,MAAM,IAAI,CAAC,SAAS,EAAE,CAAA;QACtC,OAAO,OAAO,CAAC,WAAW,EAAE,CAAA;IAC9B,CAAC;IAEM,WAAW,CAAC,KAAa,EAAE,IAAiB;QACjD,OAAO,IAAA,uBAAgB,EAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;;YAChD,MAAM,eAAe,GAAG,MAAM,IAAI,CAAC,SAAS,EAAE,CAAA;YAC9C,MAAM,EAAE,GAAG,IAAI,CAAC,UAAU,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,GAAG,CAAC,CAAA,CAAC,uBAAuB;YAClF,MAAM,CAAC,GAAG,IAAI,CAAC,UAAU,KAAK,CAAC,CAAA;YAE/B,IAAI,EAAE,KAAK,EAAE,UAAU,EAAE,GAAG,EAAE,QAAQ,EAAE,GAAG,KAAK,CAAA;YAChD,UAAU,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,UAAU,GAAG,EAAE,CAAC,CAAA;YACzC,QAAQ,IAAI,EAAE,CAAA;YAEd,IAAI,QAAQ,GAAG,CAAC,IAAI,UAAU,GAAG,QAAQ,EAAE;gBACzC,QAAQ,CAAC,QAAQ,EAAE,CAAA;gBACnB,OAAM;aACP;YAED,MAAM,GAAG,GAAG,eAAe,CAAC,WAAW,CACrC;gBACE,GAAG,KAAK;gBACR,KAAK,EAAE,UAAU;gBACjB,GAAG,EAAE,QAAQ;aACd,EACD,IAAI,CACL,CAAA;YACD,MAAM,KAAK,GAAG,MAAM,IAAA,qBAAc,EAAC,GAAG,CAAC,IAAI,CAAC,IAAA,mBAAO,GAAE,CAAC,CAAC,CAAA;YACvD,MAAM,QAAQ,GAAG,CAAA,MAAA,KAAK,CAAC,CAAC,CAAC,0CAAE,GAAG,CAAC,KAAK,CAAC,KAAI,EAAE,CAAA;YAE3C,KAAK,IAAI,CAAC,GAAG,EAAE,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,GAAG,EAAE,EAAE,CAAC,IAAI,IAAI,CAAC,WAAW,EAAE;gBAChE,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,GAAG,EAAE,EAAE,CAAC,GAAG,EAAE,CAAC,CAAA;gBAC1D,IAAI,EAAE,GAAG,CAAC,CAAA;gBACV,IAAI,EAAE,GAAG,CAAC,CAAA;gBACV,IAAI,GAAG,GAAG,CAAC,CAAA;gBACX,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBACjC,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBAChC,EAAE,EAAE,CAAA;qBACL;yBAAM,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBACvC,EAAE,EAAE,CAAA;qBACL;oBACD,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBAChB,GAAG,EAAE,CAAA;qBACN;iBACF;gBACD,MAAM,GAAG,GAAG,UAAU,CAAA;gBACtB,IAAI,KAAK,CAAA;gBACT,IAAI,IAAI,CAAC,MAAM,KAAK,SAAS,EAAE;oBAC7B,KAAK,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,GAAG,IAAI,CAAC,CAAC,CAAA;iBAC/B;qBAAM,IAAI,IAAI,CAAC,MAAM,KAAK,MAAM,EAAE;oBACjC,KAAK,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC,CAAA;iBACnC;gBAED,QAAQ,CAAC,IAAI,CACX,IAAI,oBAAa,CAAC;oBAChB,QAAQ,EAAE,GAAG,IAAI,CAAC,EAAE,IAAI,GAAG,GAAG,CAAC,EAAE;oBACjC,KAAK,EAAE,GAAG,GAAG,CAAC;oBACd,GAAG,EAAE,GAAG,GAAG,CAAC,GAAG,IAAI,CAAC,WAAW;oBAC/B,KAAK;iBACN,CAAC,CACH,CAAA;aACF;YACD,QAAQ,CAAC,QAAQ,EAAE,CAAA;QACrB,CAAC,CAAC,CAAA;IACJ,CAAC;IAED;;;;OAIG;IACI,aAAa,EAAC,gBAAgB,IAAG,CAAC;;AAlF3B,sBAAY,GAAG,CAAC,eAAe,CAAC,AAApB,CAAoB"}

package/dist/GCContentAdapter/configSchema.d.ts

@@ -1,3 +1,11 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const GCContentAdapterF: (pluginManager: PluginManager) => import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+declare const GCContentAdapterF: (pluginManager: PluginManager) => import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+    /**
+     * #slot
+     */
+    sequenceAdapter: {
+        type: string;
+        defaultValue: null;
+    };
+}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
 export default GCContentAdapterF;

package/dist/GCContentAdapter/configSchema.js

@@ -3,6 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
 /**
  * #config GCContentAdapter
+ * #category adapter
  */
 function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
 const GCContentAdapterF = (pluginManager) => {

package/dist/GCContentAdapter/configSchema.js.map

@@ -1 +1 @@
-{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/GCContentAdapter/configSchema.ts"],"names":[],"mappings":";;AACA,+DAAiE;AAEjE;;GAEG;AACH,SAAS,CAAC,KAAI,CAAC,CAAC,wDAAwD;AAExE,MAAM,iBAAiB,GAAG,CAAC,aAA4B,EAAE,EAAE;IACzD,OAAO,IAAA,mCAAmB,EACxB,kBAAkB,EAClB;QACE;;WAEG;QACH,eAAe,EAAE;YACf,IAAI,EAAE,QAAQ;YACd,YAAY,EAAE,IAAI;SACnB;KACF,EACD,EAAE,eAAe,EAAE,IAAI,EAAE,CAC1B,CAAA;AACH,CAAC,CAAA;AAED,kBAAe,iBAAiB,CAAA"}
+{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/GCContentAdapter/configSchema.ts"],"names":[],"mappings":";;AACA,+DAAiE;AAEjE;;;GAGG;AACH,SAAS,CAAC,KAAI,CAAC,CAAC,wDAAwD;AAExE,MAAM,iBAAiB,GAAG,CAAC,aAA4B,EAAE,EAAE;IACzD,OAAO,IAAA,mCAAmB,EACxB,kBAAkB,EAClB;QACE;;WAEG;QACH,eAAe,EAAE;YACf,IAAI,EAAE,QAAQ;YACd,YAAY,EAAE,IAAI;SACnB;KACF,EACD,EAAE,eAAe,EAAE,IAAI,EAAE,CAC1B,CAAA;AACH,CAAC,CAAA;AAED,kBAAe,iBAAiB,CAAA"}

package/dist/LinearGCContentDisplay/config.d.ts

@@ -1,5 +1,6 @@
 import PluginManager from '@jbrowse/core/PluginManager';
 /**
  * #config LinearGCContentDisplay
+ * #category display
  */
-export default function WiggleConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+export default function WiggleConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration").AnyConfigurationSchemaType, undefined>>;

package/dist/LinearGCContentDisplay/config.js

@@ -3,6 +3,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
 /**
  * #config LinearGCContentDisplay
+ * #category display
  */
 function WiggleConfigFactory(pluginManager) {
     return (0, configuration_1.ConfigurationSchema)('LinearGCContentDisplay', {}, {

package/dist/LinearGCContentDisplay/config.js.map

@@ -1 +1 @@
-{"version":3,"file":"config.js","sourceRoot":"","sources":["../../src/LinearGCContentDisplay/config.ts"],"names":[],"mappings":";;AAAA,+DAAiE;AAGjE;;GAEG;AACH,SAAwB,mBAAmB,CAAC,aAA4B;IACtE,OAAO,IAAA,mCAAmB,EACxB,wBAAwB,EACxB,EAAE,EACF;QACE;;WAEG;QACH,iBAAiB,EAAE,aAAa,CAAC,cAAc,CAAC,qBAAqB,CAAC;aACnE,YAAY;QACf,eAAe,EAAE,IAAI;KACtB,CACF,CAAA;AACH,CAAC;AAbD,sCAaC"}
+{"version":3,"file":"config.js","sourceRoot":"","sources":["../../src/LinearGCContentDisplay/config.ts"],"names":[],"mappings":";;AAAA,+DAAiE;AAGjE;;;GAGG;AACH,SAAwB,mBAAmB,CAAC,aAA4B;IACtE,OAAO,IAAA,mCAAmB,EACxB,wBAAwB,EACxB,EAAE,EACF;QACE;;WAEG;QACH,iBAAiB,EAAE,aAAa,CAAC,cAAc,CAAC,qBAAqB,CAAC;aACnE,YAAY;QACf,eAAe,EAAE,IAAI;KACtB,CACF,CAAA;AACH,CAAC;AAbD,sCAaC"}

package/dist/LinearGCContentDisplay/stateModel.d.ts

@@ -3,7 +3,8 @@ import { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
 import PluginManager from '@jbrowse/core/PluginManager';
 /**
  * #stateModel LinearGCContentDisplay
- * base model BaseWiggleDisplayModel
+ * #category display
+ * base model `BaseWiggleDisplayModel`
  */
 export default function stateModelFactory(pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
     id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
@@ -11,6 +12,10 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
 } & {
     heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
+} & {
+    userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
+    userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
+} & {
     blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
         key: import("mobx-state-tree").ISimpleType<string>;
         region: import("mobx-state-tree").IModelType<{
@@ -57,11 +62,30 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         reload(): void;
         beforeDestroy(): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
-    userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
+    configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+        maxFeatureScreenDensity: {
+            type: string;
+            description: string;
+            defaultValue: number;
+        };
+        fetchSizeLimit: {
+            type: string;
+            defaultValue: number;
+            description: string;
+        };
+        height: {
+            type: string;
+            defaultValue: number;
+            description: string;
+        };
+        mouseover: {
+            type: string;
+            description: string;
+            defaultValue: string;
+            contextVariable: string[];
+        };
+    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
 } & {
-    type: import("mobx-state-tree").ISimpleType<"LinearWiggleDisplay">;
-    configuration: import("mobx-state-tree").ITypeUnion<any, any, any>;
     selectedRendering: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
     resolution: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
     fill: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<boolean>>;
@@ -78,6 +102,9 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         max: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
         min: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
     }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
+    configuration: AnyConfigurationSchemaType;
+} & {
+    type: import("mobx-state-tree").ISimpleType<"LinearWiggleDisplay">;
 } & {
     /**
      * #property
@@ -86,6 +113,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
 }, {
     rendererTypeName: string;
     error: unknown;
+    message: string | undefined;
 } & {
     readonly RenderingComponent: import("react").FC<{
         model: {
@@ -95,6 +123,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
             rendererTypeName: string;
             error: unknown;
+            message: string | undefined;
         } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
             id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
             type: import("mobx-state-tree").ISimpleType<string>;
@@ -102,6 +131,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         }, {
             rendererTypeName: string;
             error: unknown;
+            message: string | undefined;
         }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
         onHorizontalScroll?: Function | undefined;
         blockState?: Record<string, any> | undefined;
@@ -114,6 +144,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
             rendererTypeName: string;
             error: unknown;
+            message: string | undefined;
         } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
             id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
             type: import("mobx-state-tree").ISimpleType<string>;
@@ -121,6 +152,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         }, {
             rendererTypeName: string;
             error: unknown;
+            message: string | undefined;
         }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
     }> | null;
     readonly adapterConfig: any;
@@ -130,21 +162,49 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     readonly DisplayMessageComponent: import("react").FC<any> | undefined;
     trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
-    regionCannotBeRendered(): undefined;
+    regionCannotBeRendered(): null;
 } & {
+    setMessage(arg?: string | undefined): void;
     setError(error?: unknown): void;
     setRpcDriverName(rpcDriverName: string): void;
     reload(): void;
 } & {
-    currBpPerPx: number;
     scrollTop: number;
-    message: string;
+} & {
+    readonly height: number;
+} & {
+    setScrollTop(scrollTop: number): void;
+    setHeight(displayHeight: number): number;
+    resizeHeight(distance: number): number;
+} & {
+    featureDensityStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats> | undefined;
+    featureDensityStats: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined;
+    currStatsBpPerPx: number;
+} & {
+    readonly currentBytesRequested: number;
+    readonly currentFeatureScreenDensity: number;
+    readonly maxFeatureScreenDensity: any;
+    readonly featureDensityStatsReady: boolean;
+    readonly maxAllowableBytes: number;
+} & {
+    afterAttach(): void;
+} & {
+    setCurrStatsBpPerPx(n: number): void;
+    setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined): void;
+    getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
+    setFeatureDensityStatsP(arg: any): void;
+    setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined): void;
+    clearFeatureDensityStats(): void;
+} & {
+    readonly regionTooLarge: boolean;
+    readonly regionTooLargeReason: string;
+} & {
+    regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
+    regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react").JSX.Element | null;
+} & {
     featureIdUnderMouse: string | undefined;
     contextMenuFeature: import("@jbrowse/core/util").Feature | undefined;
-    estimatedRegionsStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
-    estimatedRegionsStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
 } & {
-    readonly height: number;
     readonly blockType: "dynamicBlocks" | "staticBlocks";
     readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
 } & {
@@ -158,49 +218,22 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
     getFeatureByID(blockKey: string, id: string): [number, number, number, number] | undefined;
     searchFeatureByID(id: string): [number, number, number, number] | undefined;
-    readonly currentBytesRequested: number;
-    readonly currentFeatureScreenDensity: number;
-    readonly maxFeatureScreenDensity: any;
-    readonly estimatedStatsReady: boolean;
-    readonly maxAllowableBytes: number;
-} & {
-    setMessage(message: string): void;
 } & {
-    afterAttach(): void;
-    estimateRegionsStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats>;
-    setRegionsStatsP(arg: any): void;
-    setRegionsStats(estimatedRegionsStats?: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined): void;
-    clearRegionsStats(): void;
-    setHeight(displayHeight: number): number;
-    resizeHeight(distance: number): number;
-    setScrollTop(scrollTop: number): void;
-    updateStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined): void;
     addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
-    setCurrBpPerPx(n: number): void;
     deleteBlock(key: string): void;
     selectFeature(feature: import("@jbrowse/core/util").Feature): void;
     clearFeatureSelection(): void;
-    setFeatureIdUnderMouse(feature: string | undefined): void;
-    reload(): void;
+    setFeatureIdUnderMouse(feature?: string | undefined): void;
     setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature | undefined): void;
-} & {
-    readonly regionTooLarge: boolean;
-    readonly regionTooLargeReason: string;
 } & {
     reload(): Promise<void>;
 } & {
-    afterAttach(): void;
-} & {
-    regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
-    regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): JSX.Element | null;
     trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     contextMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     renderProps(): any;
 } & {
-    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view/src/LinearGenomeView").ExportSvgOptions & {
-        overrideHeight: number;
-        theme: import("@mui/material").ThemeOptions;
-    }): Promise<JSX.Element>;
+    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react").JSX.Element>;
+    afterAttach(): void;
 } & {
     message: string | undefined;
     stats: {
@@ -209,7 +242,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     } | undefined;
     statsFetchInProgress: AbortController | undefined;
 } & {
-    updateStats(stats: {
+    updateQuantitativeStats(stats: {
         scoreMin: number;
         scoreMax: number;
     }): void;
@@ -230,25 +263,25 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     toggleCrossHatches(): void;
     setCrossHatches(cross: boolean): void;
 } & {
-    readonly TooltipComponent: import("react").FC<{}>;
     readonly adapterTypeName: any;
     readonly rendererTypeNameSimple: any;
-    readonly rendererTypeName: string;
     readonly filters: undefined;
     readonly scaleType: any;
     readonly maxScore: any;
     readonly minScore: any;
 } & {
+    readonly adapterCapabilities: string[];
     readonly rendererConfig: {
         [x: string]: any;
     } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
         setSubschema(slotName: string, data: unknown): any;
     } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
+    readonly autoscaleType: any;
 } & {
-    readonly filled: any;
-    readonly summaryScoreModeSetting: any;
     readonly domain: number[] | undefined;
-    readonly needsScalebar: boolean;
+} & {
+    readonly filled: boolean;
+    readonly summaryScoreModeSetting: string;
     readonly scaleOpts: {
         domain: number[] | undefined;
         stats: {
@@ -260,8 +293,36 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         inverted: any;
     };
     readonly canHaveFill: boolean;
-    readonly autoscaleType: any;
-    readonly displayCrossHatchesSetting: any;
+    readonly displayCrossHatchesSetting: boolean;
+    readonly hasResolution: boolean;
+    readonly hasGlobalStats: boolean;
+} & {
+    scoreTrackMenuItems(): ({
+        label: string;
+        subMenu: {
+            label: string;
+            onClick: () => void;
+        }[];
+        onClick?: undefined;
+    } | {
+        label: string;
+        subMenu: {
+            label: string;
+            type: string;
+            checked: boolean;
+            onClick: () => void;
+        }[];
+        onClick?: undefined;
+    } | {
+        label: string;
+        onClick: () => void;
+        subMenu?: undefined;
+    })[];
+} & {
+    reload(): Promise<void>;
+} & {
+    readonly TooltipComponent: import("react").FC<{}>;
+    readonly rendererTypeName: string;
 } & {
     readonly ticks: {
         range: number[];
@@ -269,14 +330,38 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         format: (d: import("d3-scale").NumberValue) => string;
         position: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleQuantize<number, never>;
     } | undefined;
-    readonly adapterCapabilities: string[];
 } & {
     renderProps(): any;
-    readonly hasResolution: boolean;
-    readonly hasGlobalStats: boolean;
+    readonly needsScalebar: boolean;
     readonly fillSetting: 0 | 1 | 2;
 } & {
     trackMenuItems(): (import("@jbrowse/core/ui").MenuDivider | import("@jbrowse/core/ui").MenuSubHeader | import("@jbrowse/core/ui").NormalMenuItem | import("@jbrowse/core/ui").CheckboxMenuItem | import("@jbrowse/core/ui").RadioMenuItem | import("@jbrowse/core/ui").SubMenuItem | {
+        label: string;
+        subMenu: ({
+            label: string;
+            subMenu: {
+                label: string;
+                onClick: () => void;
+            }[];
+            onClick?: undefined;
+        } | {
+            label: string;
+            subMenu: {
+                label: string;
+                type: string;
+                checked: boolean;
+                onClick: () => void;
+            }[];
+            onClick?: undefined;
+        } | {
+            label: string;
+            onClick: () => void;
+            subMenu?: undefined;
+        })[];
+        type?: undefined;
+        checked?: undefined;
+        onClick?: undefined;
+    } | {
         label: string;
         subMenu: {
             label: string;
@@ -290,17 +375,13 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     } | {
         type: string;
         label: string;
-        checked: any;
+        checked: boolean;
         onClick: () => void;
         subMenu?: undefined;
     })[];
 } & {
-    reload(): Promise<void>;
     afterAttach(): void;
-    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view/src/LinearGenomeView").ExportSvgOptions & {
-        overrideHeight: number;
-        theme: import("@mui/material").ThemeOptions;
-    }): Promise<JSX.Element>;
+    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react").JSX.Element>;
 } & {
     /**
      * #method

package/dist/LinearGCContentDisplay/stateModel.js

@@ -5,7 +5,8 @@ const plugin_wiggle_1 = require("@jbrowse/plugin-wiggle");
 const mobx_state_tree_1 = require("mobx-state-tree");
 /**
  * #stateModel LinearGCContentDisplay
- * base model BaseWiggleDisplayModel
+ * #category display
+ * base model `BaseWiggleDisplayModel`
  */
 function stateModelFactory(pluginManager, configSchema) {
     return mobx_state_tree_1.types

package/dist/LinearGCContentDisplay/stateModel.js.map

@@ -1 +1 @@
-{"version":3,"file":"stateModel.js","sourceRoot":"","sources":["../../src/LinearGCContentDisplay/stateModel.ts"],"names":[],"mappings":";;AAAA,+DAGoC;AAEpC,0DAAwE;AACxE,qDAAuC;AAEvC;;;GAGG;AACH,SAAwB,iBAAiB,CACvC,aAA4B,EAC5B,YAAwC;IAExC,OAAO,uBAAK;SACT,OAAO,CACN,wBAAwB,EACxB,IAAA,+CAA+B,EAAC,aAAa,EAAE,YAAY,CAAC,EAC5D,uBAAK,CAAC,KAAK,CAAC;QACV;;WAEG;QACH,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,wBAAwB,CAAC;KAC9C,CAAC,CACH;SACA,KAAK,CAAC,IAAI,CAAC,EAAE;QACZ,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,GAAG,IAAI,CAAA;QAC9C,OAAO;YACL;;;;eAIG;YACH,WAAW;gBACT,MAAM,eAAe,GAAG,IAAA,uBAAO,EAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAA;gBAC5D,OAAO;oBACL,GAAG,gBAAgB,EAAE;oBACrB,aAAa,EAAE;wBACb,IAAI,EAAE,kBAAkB;wBACxB,eAAe;qBAChB;iBACF,CAAA;YACH,CAAC;SACF,CAAA;IACH,CAAC,CAAC,CAAA;AACN,CAAC;AAnCD,oCAmCC"}
+{"version":3,"file":"stateModel.js","sourceRoot":"","sources":["../../src/LinearGCContentDisplay/stateModel.ts"],"names":[],"mappings":";;AAAA,+DAGoC;AAEpC,0DAAwE;AACxE,qDAAuC;AAEvC;;;;GAIG;AACH,SAAwB,iBAAiB,CACvC,aAA4B,EAC5B,YAAwC;IAExC,OAAO,uBAAK;SACT,OAAO,CACN,wBAAwB,EACxB,IAAA,+CAA+B,EAAC,aAAa,EAAE,YAAY,CAAC,EAC5D,uBAAK,CAAC,KAAK,CAAC;QACV;;WAEG;QACH,IAAI,EAAE,uBAAK,CAAC,OAAO,CAAC,wBAAwB,CAAC;KAC9C,CAAC,CACH;SACA,KAAK,CAAC,IAAI,CAAC,EAAE;QACZ,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,GAAG,IAAI,CAAA;QAC9C,OAAO;YACL;;;;eAIG;YACH,WAAW;gBACT,MAAM,eAAe,GAAG,IAAA,uBAAO,EAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAA;gBAC5D,OAAO;oBACL,GAAG,gBAAgB,EAAE;oBACrB,aAAa,EAAE;wBACb,IAAI,EAAE,kBAAkB;wBACxB,eAAe;qBAChB;iBACF,CAAA;YACH,CAAC;SACF,CAAA;IACH,CAAC,CAAC,CAAA;AACN,CAAC;AAnCD,oCAmCC"}

package/esm/GCContentAdapter/GCContentAdapter.js

@@ -3,7 +3,7 @@ import { firstValueFrom } from 'rxjs';
 import { ObservableCreate } from '@jbrowse/core/util/rxjs';
 import { SimpleFeature } from '@jbrowse/core/util';
 import { toArray } from 'rxjs/operators';
-export default class default_1 extends BaseFeatureDataAdapter {
+class default_1 extends BaseFeatureDataAdapter {
     constructor() {
         super(...arguments);
         this.windowSize = 1000;
@@ -84,4 +84,5 @@ export default class default_1 extends BaseFeatureDataAdapter {
     freeResources( /* { region } */) { }
 }
 default_1.capabilities = ['hasLocalStats'];
+export default default_1;
 //# sourceMappingURL=GCContentAdapter.js.map

package/esm/GCContentAdapter/GCContentAdapter.js.map

@@ -1 +1 @@
-{"version":3,"file":"GCContentAdapter.js","sourceRoot":"","sources":["../../src/GCContentAdapter/GCContentAdapter.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,sBAAsB,GAEvB,MAAM,yCAAyC,CAAA;AAChD,OAAO,EAAE,cAAc,EAAE,MAAM,MAAM,CAAA;AACrC,OAAO,EAAE,gBAAgB,EAAE,MAAM,yBAAyB,CAAA;AAC1D,OAAO,EAAE,aAAa,EAAmB,MAAM,oBAAoB,CAAA;AACnE,OAAO,EAAE,OAAO,EAAE,MAAM,gBAAgB,CAAA;AAExC,MAAM,CAAC,OAAO,gBAAO,SAAQ,sBAAsB;IAAnD;;QACU,eAAU,GAAG,IAAI,CAAA;QAEjB,gBAAW,GAAG,IAAI,CAAA;QAElB,WAAM,GAAG,SAAS,CAAA;IAqF5B,CAAC;IAjFQ,KAAK,CAAC,SAAS;;QACpB,MAAM,OAAO,GAAG,MAAM,CAAA,MAAA,IAAI,CAAC,aAAa,qDAAG,IAAI,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAC,CAAA,CAAA;QAC3E,IAAI,CAAC,OAAO,EAAE;YACZ,MAAM,IAAI,KAAK,CAAC,0BAA0B,CAAC,CAAA;SAC5C;QACD,OAAO,OAAO,CAAC,WAAqC,CAAA;IACtD,CAAC;IAEM,KAAK,CAAC,WAAW;QACtB,MAAM,OAAO,GAAG,MAAM,IAAI,CAAC,SAAS,EAAE,CAAA;QACtC,OAAO,OAAO,CAAC,WAAW,EAAE,CAAA;IAC9B,CAAC;IAEM,WAAW,CAAC,KAAa,EAAE,IAAiB;QACjD,OAAO,gBAAgB,CAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;;YAChD,MAAM,eAAe,GAAG,MAAM,IAAI,CAAC,SAAS,EAAE,CAAA;YAC9C,MAAM,EAAE,GAAG,IAAI,CAAC,UAAU,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,GAAG,CAAC,CAAA,CAAC,uBAAuB;YAClF,MAAM,CAAC,GAAG,IAAI,CAAC,UAAU,KAAK,CAAC,CAAA;YAE/B,IAAI,EAAE,KAAK,EAAE,UAAU,EAAE,GAAG,EAAE,QAAQ,EAAE,GAAG,KAAK,CAAA;YAChD,UAAU,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,UAAU,GAAG,EAAE,CAAC,CAAA;YACzC,QAAQ,IAAI,EAAE,CAAA;YAEd,IAAI,QAAQ,GAAG,CAAC,IAAI,UAAU,GAAG,QAAQ,EAAE;gBACzC,QAAQ,CAAC,QAAQ,EAAE,CAAA;gBACnB,OAAM;aACP;YAED,MAAM,GAAG,GAAG,eAAe,CAAC,WAAW,CACrC;gBACE,GAAG,KAAK;gBACR,KAAK,EAAE,UAAU;gBACjB,GAAG,EAAE,QAAQ;aACd,EACD,IAAI,CACL,CAAA;YACD,MAAM,KAAK,GAAG,MAAM,cAAc,CAAC,GAAG,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC,CAAA;YACvD,MAAM,QAAQ,GAAG,CAAA,MAAA,KAAK,CAAC,CAAC,CAAC,0CAAE,GAAG,CAAC,KAAK,CAAC,KAAI,EAAE,CAAA;YAE3C,KAAK,IAAI,CAAC,GAAG,EAAE,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,GAAG,EAAE,EAAE,CAAC,IAAI,IAAI,CAAC,WAAW,EAAE;gBAChE,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,GAAG,EAAE,EAAE,CAAC,GAAG,EAAE,CAAC,CAAA;gBAC1D,IAAI,EAAE,GAAG,CAAC,CAAA;gBACV,IAAI,EAAE,GAAG,CAAC,CAAA;gBACV,IAAI,GAAG,GAAG,CAAC,CAAA;gBACX,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBACjC,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBAChC,EAAE,EAAE,CAAA;qBACL;yBAAM,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBACvC,EAAE,EAAE,CAAA;qBACL;oBACD,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBAChB,GAAG,EAAE,CAAA;qBACN;iBACF;gBACD,MAAM,GAAG,GAAG,UAAU,CAAA;gBACtB,IAAI,KAAK,CAAA;gBACT,IAAI,IAAI,CAAC,MAAM,KAAK,SAAS,EAAE;oBAC7B,KAAK,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,GAAG,IAAI,CAAC,CAAC,CAAA;iBAC/B;qBAAM,IAAI,IAAI,CAAC,MAAM,KAAK,MAAM,EAAE;oBACjC,KAAK,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC,CAAA;iBACnC;gBAED,QAAQ,CAAC,IAAI,CACX,IAAI,aAAa,CAAC;oBAChB,QAAQ,EAAE,GAAG,IAAI,CAAC,EAAE,IAAI,GAAG,GAAG,CAAC,EAAE;oBACjC,KAAK,EAAE,GAAG,GAAG,CAAC;oBACd,GAAG,EAAE,GAAG,GAAG,CAAC,GAAG,IAAI,CAAC,WAAW;oBAC/B,KAAK;iBACN,CAAC,CACH,CAAA;aACF;YACD,QAAQ,CAAC,QAAQ,EAAE,CAAA;QACrB,CAAC,CAAC,CAAA;IACJ,CAAC;IAED;;;;OAIG;IACI,aAAa,EAAC,gBAAgB,IAAG,CAAC;;AAlF3B,sBAAY,GAAG,CAAC,eAAe,CAAC,CAAA"}
+{"version":3,"file":"GCContentAdapter.js","sourceRoot":"","sources":["../../src/GCContentAdapter/GCContentAdapter.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,sBAAsB,GAEvB,MAAM,yCAAyC,CAAA;AAChD,OAAO,EAAE,cAAc,EAAE,MAAM,MAAM,CAAA;AACrC,OAAO,EAAE,gBAAgB,EAAE,MAAM,yBAAyB,CAAA;AAC1D,OAAO,EAAE,aAAa,EAAmB,MAAM,oBAAoB,CAAA;AACnE,OAAO,EAAE,OAAO,EAAE,MAAM,gBAAgB,CAAA;AAExC,eAAqB,SAAQ,sBAAsB;IAAnD;;QACU,eAAU,GAAG,IAAI,CAAA;QAEjB,gBAAW,GAAG,IAAI,CAAA;QAElB,WAAM,GAAG,SAAS,CAAA;IAqF5B,CAAC;IAjFQ,KAAK,CAAC,SAAS;;QACpB,MAAM,OAAO,GAAG,MAAM,CAAA,MAAA,IAAI,CAAC,aAAa,qDAAG,IAAI,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAC,CAAA,CAAA;QAC3E,IAAI,CAAC,OAAO,EAAE;YACZ,MAAM,IAAI,KAAK,CAAC,0BAA0B,CAAC,CAAA;SAC5C;QACD,OAAO,OAAO,CAAC,WAAqC,CAAA;IACtD,CAAC;IAEM,KAAK,CAAC,WAAW;QACtB,MAAM,OAAO,GAAG,MAAM,IAAI,CAAC,SAAS,EAAE,CAAA;QACtC,OAAO,OAAO,CAAC,WAAW,EAAE,CAAA;IAC9B,CAAC;IAEM,WAAW,CAAC,KAAa,EAAE,IAAiB;QACjD,OAAO,gBAAgB,CAAU,KAAK,EAAC,QAAQ,EAAC,EAAE;;YAChD,MAAM,eAAe,GAAG,MAAM,IAAI,CAAC,SAAS,EAAE,CAAA;YAC9C,MAAM,EAAE,GAAG,IAAI,CAAC,UAAU,KAAK,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,IAAI,CAAC,UAAU,GAAG,CAAC,CAAA,CAAC,uBAAuB;YAClF,MAAM,CAAC,GAAG,IAAI,CAAC,UAAU,KAAK,CAAC,CAAA;YAE/B,IAAI,EAAE,KAAK,EAAE,UAAU,EAAE,GAAG,EAAE,QAAQ,EAAE,GAAG,KAAK,CAAA;YAChD,UAAU,GAAG,IAAI,CAAC,GAAG,CAAC,CAAC,EAAE,UAAU,GAAG,EAAE,CAAC,CAAA;YACzC,QAAQ,IAAI,EAAE,CAAA;YAEd,IAAI,QAAQ,GAAG,CAAC,IAAI,UAAU,GAAG,QAAQ,EAAE;gBACzC,QAAQ,CAAC,QAAQ,EAAE,CAAA;gBACnB,OAAM;aACP;YAED,MAAM,GAAG,GAAG,eAAe,CAAC,WAAW,CACrC;gBACE,GAAG,KAAK;gBACR,KAAK,EAAE,UAAU;gBACjB,GAAG,EAAE,QAAQ;aACd,EACD,IAAI,CACL,CAAA;YACD,MAAM,KAAK,GAAG,MAAM,cAAc,CAAC,GAAG,CAAC,IAAI,CAAC,OAAO,EAAE,CAAC,CAAC,CAAA;YACvD,MAAM,QAAQ,GAAG,CAAA,MAAA,KAAK,CAAC,CAAC,CAAC,0CAAE,GAAG,CAAC,KAAK,CAAC,KAAI,EAAE,CAAA;YAE3C,KAAK,IAAI,CAAC,GAAG,EAAE,EAAE,CAAC,GAAG,QAAQ,CAAC,MAAM,GAAG,EAAE,EAAE,CAAC,IAAI,IAAI,CAAC,WAAW,EAAE;gBAChE,MAAM,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,GAAG,EAAE,EAAE,CAAC,GAAG,EAAE,CAAC,CAAA;gBAC1D,IAAI,EAAE,GAAG,CAAC,CAAA;gBACV,IAAI,EAAE,GAAG,CAAC,CAAA;gBACV,IAAI,GAAG,GAAG,CAAC,CAAA;gBACX,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;oBACjC,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBAChC,EAAE,EAAE,CAAA;qBACL;yBAAM,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBACvC,EAAE,EAAE,CAAA;qBACL;oBACD,IAAI,CAAC,CAAC,CAAC,CAAC,KAAK,GAAG,EAAE;wBAChB,GAAG,EAAE,CAAA;qBACN;iBACF;gBACD,MAAM,GAAG,GAAG,UAAU,CAAA;gBACtB,IAAI,KAAK,CAAA;gBACT,IAAI,IAAI,CAAC,MAAM,KAAK,SAAS,EAAE;oBAC7B,KAAK,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,GAAG,IAAI,CAAC,CAAC,CAAA;iBAC/B;qBAAM,IAAI,IAAI,CAAC,MAAM,KAAK,MAAM,EAAE;oBACjC,KAAK,GAAG,CAAC,EAAE,GAAG,EAAE,CAAC,GAAG,CAAC,EAAE,GAAG,EAAE,IAAI,CAAC,CAAC,CAAA;iBACnC;gBAED,QAAQ,CAAC,IAAI,CACX,IAAI,aAAa,CAAC;oBAChB,QAAQ,EAAE,GAAG,IAAI,CAAC,EAAE,IAAI,GAAG,GAAG,CAAC,EAAE;oBACjC,KAAK,EAAE,GAAG,GAAG,CAAC;oBACd,GAAG,EAAE,GAAG,GAAG,CAAC,GAAG,IAAI,CAAC,WAAW;oBAC/B,KAAK;iBACN,CAAC,CACH,CAAA;aACF;YACD,QAAQ,CAAC,QAAQ,EAAE,CAAA;QACrB,CAAC,CAAC,CAAA;IACJ,CAAC;IAED;;;;OAIG;IACI,aAAa,EAAC,gBAAgB,IAAG,CAAC;;AAlF3B,sBAAY,GAAG,CAAC,eAAe,CAAC,AAApB,CAAoB"}

package/esm/GCContentAdapter/configSchema.d.ts

@@ -1,3 +1,11 @@
 import PluginManager from '@jbrowse/core/PluginManager';
-declare const GCContentAdapterF: (pluginManager: PluginManager) => import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+declare const GCContentAdapterF: (pluginManager: PluginManager) => import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+    /**
+     * #slot
+     */
+    sequenceAdapter: {
+        type: string;
+        defaultValue: null;
+    };
+}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
 export default GCContentAdapterF;

package/esm/GCContentAdapter/configSchema.js

@@ -1,6 +1,7 @@
 import { ConfigurationSchema } from '@jbrowse/core/configuration';
 /**
  * #config GCContentAdapter
+ * #category adapter
  */
 function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
 const GCContentAdapterF = (pluginManager) => {

package/esm/GCContentAdapter/configSchema.js.map

@@ -1 +1 @@
-{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/GCContentAdapter/configSchema.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,mBAAmB,EAAE,MAAM,6BAA6B,CAAA;AAEjE;;GAEG;AACH,SAAS,CAAC,KAAI,CAAC,CAAC,wDAAwD;AAExE,MAAM,iBAAiB,GAAG,CAAC,aAA4B,EAAE,EAAE;IACzD,OAAO,mBAAmB,CACxB,kBAAkB,EAClB;QACE;;WAEG;QACH,eAAe,EAAE;YACf,IAAI,EAAE,QAAQ;YACd,YAAY,EAAE,IAAI;SACnB;KACF,EACD,EAAE,eAAe,EAAE,IAAI,EAAE,CAC1B,CAAA;AACH,CAAC,CAAA;AAED,eAAe,iBAAiB,CAAA"}
+{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/GCContentAdapter/configSchema.ts"],"names":[],"mappings":"AACA,OAAO,EAAE,mBAAmB,EAAE,MAAM,6BAA6B,CAAA;AAEjE;;;GAGG;AACH,SAAS,CAAC,KAAI,CAAC,CAAC,wDAAwD;AAExE,MAAM,iBAAiB,GAAG,CAAC,aAA4B,EAAE,EAAE;IACzD,OAAO,mBAAmB,CACxB,kBAAkB,EAClB;QACE;;WAEG;QACH,eAAe,EAAE;YACf,IAAI,EAAE,QAAQ;YACd,YAAY,EAAE,IAAI;SACnB;KACF,EACD,EAAE,eAAe,EAAE,IAAI,EAAE,CAC1B,CAAA;AACH,CAAC,CAAA;AAED,eAAe,iBAAiB,CAAA"}

package/esm/LinearGCContentDisplay/config.d.ts

@@ -1,5 +1,6 @@
 import PluginManager from '@jbrowse/core/PluginManager';
 /**
  * #config LinearGCContentDisplay
+ * #category display
  */
-export default function WiggleConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+export default function WiggleConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration").AnyConfigurationSchemaType, undefined>>;

package/esm/LinearGCContentDisplay/config.js

@@ -1,6 +1,7 @@
 import { ConfigurationSchema } from '@jbrowse/core/configuration';
 /**
  * #config LinearGCContentDisplay
+ * #category display
  */
 export default function WiggleConfigFactory(pluginManager) {
     return ConfigurationSchema('LinearGCContentDisplay', {}, {

package/esm/LinearGCContentDisplay/config.js.map

@@ -1 +1 @@
-{"version":3,"file":"config.js","sourceRoot":"","sources":["../../src/LinearGCContentDisplay/config.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,mBAAmB,EAAE,MAAM,6BAA6B,CAAA;AAGjE;;GAEG;AACH,MAAM,CAAC,OAAO,UAAU,mBAAmB,CAAC,aAA4B;IACtE,OAAO,mBAAmB,CACxB,wBAAwB,EACxB,EAAE,EACF;QACE;;WAEG;QACH,iBAAiB,EAAE,aAAa,CAAC,cAAc,CAAC,qBAAqB,CAAC;aACnE,YAAY;QACf,eAAe,EAAE,IAAI;KACtB,CACF,CAAA;AACH,CAAC"}
+{"version":3,"file":"config.js","sourceRoot":"","sources":["../../src/LinearGCContentDisplay/config.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,mBAAmB,EAAE,MAAM,6BAA6B,CAAA;AAGjE;;;GAGG;AACH,MAAM,CAAC,OAAO,UAAU,mBAAmB,CAAC,aAA4B;IACtE,OAAO,mBAAmB,CACxB,wBAAwB,EACxB,EAAE,EACF;QACE;;WAEG;QACH,iBAAiB,EAAE,aAAa,CAAC,cAAc,CAAC,qBAAqB,CAAC;aACnE,YAAY;QACf,eAAe,EAAE,IAAI;KACtB,CACF,CAAA;AACH,CAAC"}

package/esm/LinearGCContentDisplay/stateModel.d.ts

@@ -3,7 +3,8 @@ import { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
 import PluginManager from '@jbrowse/core/PluginManager';
 /**
  * #stateModel LinearGCContentDisplay
- * base model BaseWiggleDisplayModel
+ * #category display
+ * base model `BaseWiggleDisplayModel`
  */
 export default function stateModelFactory(pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
     id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
@@ -11,6 +12,10 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
 } & {
     heightPreConfig: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
+} & {
+    userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
+    userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
+} & {
     blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
         key: import("mobx-state-tree").ISimpleType<string>;
         region: import("mobx-state-tree").IModelType<{
@@ -57,11 +62,30 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         reload(): void;
         beforeDestroy(): void;
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    userBpPerPxLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
-    userByteSizeLimit: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
+    configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+        maxFeatureScreenDensity: {
+            type: string;
+            description: string;
+            defaultValue: number;
+        };
+        fetchSizeLimit: {
+            type: string;
+            defaultValue: number;
+            description: string;
+        };
+        height: {
+            type: string;
+            defaultValue: number;
+            description: string;
+        };
+        mouseover: {
+            type: string;
+            description: string;
+            defaultValue: string;
+            contextVariable: string[];
+        };
+    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>;
 } & {
-    type: import("mobx-state-tree").ISimpleType<"LinearWiggleDisplay">;
-    configuration: import("mobx-state-tree").ITypeUnion<any, any, any>;
     selectedRendering: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
     resolution: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
     fill: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<boolean>>;
@@ -78,6 +102,9 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         max: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
         min: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<number>>;
     }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
+    configuration: AnyConfigurationSchemaType;
+} & {
+    type: import("mobx-state-tree").ISimpleType<"LinearWiggleDisplay">;
 } & {
     /**
      * #property
@@ -86,6 +113,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
 }, {
     rendererTypeName: string;
     error: unknown;
+    message: string | undefined;
 } & {
     readonly RenderingComponent: import("react").FC<{
         model: {
@@ -95,6 +123,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
             rendererTypeName: string;
             error: unknown;
+            message: string | undefined;
         } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
             id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
             type: import("mobx-state-tree").ISimpleType<string>;
@@ -102,6 +131,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         }, {
             rendererTypeName: string;
             error: unknown;
+            message: string | undefined;
         }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
         onHorizontalScroll?: Function | undefined;
         blockState?: Record<string, any> | undefined;
@@ -114,6 +144,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
             rendererTypeName: string;
             error: unknown;
+            message: string | undefined;
         } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
             id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
             type: import("mobx-state-tree").ISimpleType<string>;
@@ -121,6 +152,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         }, {
             rendererTypeName: string;
             error: unknown;
+            message: string | undefined;
         }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
     }> | null;
     readonly adapterConfig: any;
@@ -130,21 +162,49 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     readonly DisplayMessageComponent: import("react").FC<any> | undefined;
     trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
-    regionCannotBeRendered(): undefined;
+    regionCannotBeRendered(): null;
 } & {
+    setMessage(arg?: string | undefined): void;
     setError(error?: unknown): void;
     setRpcDriverName(rpcDriverName: string): void;
     reload(): void;
 } & {
-    currBpPerPx: number;
     scrollTop: number;
-    message: string;
+} & {
+    readonly height: number;
+} & {
+    setScrollTop(scrollTop: number): void;
+    setHeight(displayHeight: number): number;
+    resizeHeight(distance: number): number;
+} & {
+    featureDensityStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats> | undefined;
+    featureDensityStats: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined;
+    currStatsBpPerPx: number;
+} & {
+    readonly currentBytesRequested: number;
+    readonly currentFeatureScreenDensity: number;
+    readonly maxFeatureScreenDensity: any;
+    readonly featureDensityStatsReady: boolean;
+    readonly maxAllowableBytes: number;
+} & {
+    afterAttach(): void;
+} & {
+    setCurrStatsBpPerPx(n: number): void;
+    setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined): void;
+    getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
+    setFeatureDensityStatsP(arg: any): void;
+    setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats | undefined): void;
+    clearFeatureDensityStats(): void;
+} & {
+    readonly regionTooLarge: boolean;
+    readonly regionTooLargeReason: string;
+} & {
+    regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
+    regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react").JSX.Element | null;
+} & {
     featureIdUnderMouse: string | undefined;
     contextMenuFeature: import("@jbrowse/core/util").Feature | undefined;
-    estimatedRegionsStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats> | undefined;
-    estimatedRegionsStats: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined;
 } & {
-    readonly height: number;
     readonly blockType: "dynamicBlocks" | "staticBlocks";
     readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
 } & {
@@ -158,49 +218,22 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     getFeatureOverlapping(blockKey: string, x: number, y: number): string | undefined;
     getFeatureByID(blockKey: string, id: string): [number, number, number, number] | undefined;
     searchFeatureByID(id: string): [number, number, number, number] | undefined;
-    readonly currentBytesRequested: number;
-    readonly currentFeatureScreenDensity: number;
-    readonly maxFeatureScreenDensity: any;
-    readonly estimatedStatsReady: boolean;
-    readonly maxAllowableBytes: number;
-} & {
-    setMessage(message: string): void;
 } & {
-    afterAttach(): void;
-    estimateRegionsStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").Stats>;
-    setRegionsStatsP(arg: any): void;
-    setRegionsStats(estimatedRegionsStats?: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined): void;
-    clearRegionsStats(): void;
-    setHeight(displayHeight: number): number;
-    resizeHeight(distance: number): number;
-    setScrollTop(scrollTop: number): void;
-    updateStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").Stats | undefined): void;
     addBlock(key: string, block: import("@jbrowse/core/util/blockTypes").BaseBlock): void;
-    setCurrBpPerPx(n: number): void;
     deleteBlock(key: string): void;
     selectFeature(feature: import("@jbrowse/core/util").Feature): void;
     clearFeatureSelection(): void;
-    setFeatureIdUnderMouse(feature: string | undefined): void;
-    reload(): void;
+    setFeatureIdUnderMouse(feature?: string | undefined): void;
     setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature | undefined): void;
-} & {
-    readonly regionTooLarge: boolean;
-    readonly regionTooLargeReason: string;
 } & {
     reload(): Promise<void>;
 } & {
-    afterAttach(): void;
-} & {
-    regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
-    regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): JSX.Element | null;
     trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     contextMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     renderProps(): any;
 } & {
-    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view/src/LinearGenomeView").ExportSvgOptions & {
-        overrideHeight: number;
-        theme: import("@mui/material").ThemeOptions;
-    }): Promise<JSX.Element>;
+    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react").JSX.Element>;
+    afterAttach(): void;
 } & {
     message: string | undefined;
     stats: {
@@ -209,7 +242,7 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     } | undefined;
     statsFetchInProgress: AbortController | undefined;
 } & {
-    updateStats(stats: {
+    updateQuantitativeStats(stats: {
         scoreMin: number;
         scoreMax: number;
     }): void;
@@ -230,25 +263,25 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     toggleCrossHatches(): void;
     setCrossHatches(cross: boolean): void;
 } & {
-    readonly TooltipComponent: import("react").FC<{}>;
     readonly adapterTypeName: any;
     readonly rendererTypeNameSimple: any;
-    readonly rendererTypeName: string;
     readonly filters: undefined;
     readonly scaleType: any;
     readonly maxScore: any;
     readonly minScore: any;
 } & {
+    readonly adapterCapabilities: string[];
     readonly rendererConfig: {
         [x: string]: any;
     } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
         setSubschema(slotName: string, data: unknown): any;
     } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
+    readonly autoscaleType: any;
 } & {
-    readonly filled: any;
-    readonly summaryScoreModeSetting: any;
     readonly domain: number[] | undefined;
-    readonly needsScalebar: boolean;
+} & {
+    readonly filled: boolean;
+    readonly summaryScoreModeSetting: string;
     readonly scaleOpts: {
         domain: number[] | undefined;
         stats: {
@@ -260,8 +293,36 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         inverted: any;
     };
     readonly canHaveFill: boolean;
-    readonly autoscaleType: any;
-    readonly displayCrossHatchesSetting: any;
+    readonly displayCrossHatchesSetting: boolean;
+    readonly hasResolution: boolean;
+    readonly hasGlobalStats: boolean;
+} & {
+    scoreTrackMenuItems(): ({
+        label: string;
+        subMenu: {
+            label: string;
+            onClick: () => void;
+        }[];
+        onClick?: undefined;
+    } | {
+        label: string;
+        subMenu: {
+            label: string;
+            type: string;
+            checked: boolean;
+            onClick: () => void;
+        }[];
+        onClick?: undefined;
+    } | {
+        label: string;
+        onClick: () => void;
+        subMenu?: undefined;
+    })[];
+} & {
+    reload(): Promise<void>;
+} & {
+    readonly TooltipComponent: import("react").FC<{}>;
+    readonly rendererTypeName: string;
 } & {
     readonly ticks: {
         range: number[];
@@ -269,14 +330,38 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
         format: (d: import("d3-scale").NumberValue) => string;
         position: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleQuantize<number, never>;
     } | undefined;
-    readonly adapterCapabilities: string[];
 } & {
     renderProps(): any;
-    readonly hasResolution: boolean;
-    readonly hasGlobalStats: boolean;
+    readonly needsScalebar: boolean;
     readonly fillSetting: 0 | 1 | 2;
 } & {
     trackMenuItems(): (import("@jbrowse/core/ui").MenuDivider | import("@jbrowse/core/ui").MenuSubHeader | import("@jbrowse/core/ui").NormalMenuItem | import("@jbrowse/core/ui").CheckboxMenuItem | import("@jbrowse/core/ui").RadioMenuItem | import("@jbrowse/core/ui").SubMenuItem | {
+        label: string;
+        subMenu: ({
+            label: string;
+            subMenu: {
+                label: string;
+                onClick: () => void;
+            }[];
+            onClick?: undefined;
+        } | {
+            label: string;
+            subMenu: {
+                label: string;
+                type: string;
+                checked: boolean;
+                onClick: () => void;
+            }[];
+            onClick?: undefined;
+        } | {
+            label: string;
+            onClick: () => void;
+            subMenu?: undefined;
+        })[];
+        type?: undefined;
+        checked?: undefined;
+        onClick?: undefined;
+    } | {
         label: string;
         subMenu: {
             label: string;
@@ -290,17 +375,13 @@ export default function stateModelFactory(pluginManager: PluginManager, configSc
     } | {
         type: string;
         label: string;
-        checked: any;
+        checked: boolean;
         onClick: () => void;
         subMenu?: undefined;
     })[];
 } & {
-    reload(): Promise<void>;
     afterAttach(): void;
-    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view/src/LinearGenomeView").ExportSvgOptions & {
-        overrideHeight: number;
-        theme: import("@mui/material").ThemeOptions;
-    }): Promise<JSX.Element>;
+    renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react").JSX.Element>;
 } & {
     /**
      * #method

package/esm/LinearGCContentDisplay/stateModel.js

@@ -3,7 +3,8 @@ import { linearWiggleDisplayModelFactory } from '@jbrowse/plugin-wiggle';
 import { types } from 'mobx-state-tree';
 /**
  * #stateModel LinearGCContentDisplay
- * base model BaseWiggleDisplayModel
+ * #category display
+ * base model `BaseWiggleDisplayModel`
  */
 export default function stateModelFactory(pluginManager, configSchema) {
     return types

package/esm/LinearGCContentDisplay/stateModel.js.map

@@ -1 +1 @@
-{"version":3,"file":"stateModel.js","sourceRoot":"","sources":["../../src/LinearGCContentDisplay/stateModel.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,OAAO,GAER,MAAM,6BAA6B,CAAA;AAEpC,OAAO,EAAE,+BAA+B,EAAE,MAAM,wBAAwB,CAAA;AACxE,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAA;AAEvC;;;GAGG;AACH,MAAM,CAAC,OAAO,UAAU,iBAAiB,CACvC,aAA4B,EAC5B,YAAwC;IAExC,OAAO,KAAK;SACT,OAAO,CACN,wBAAwB,EACxB,+BAA+B,CAAC,aAAa,EAAE,YAAY,CAAC,EAC5D,KAAK,CAAC,KAAK,CAAC;QACV;;WAEG;QACH,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,wBAAwB,CAAC;KAC9C,CAAC,CACH;SACA,KAAK,CAAC,IAAI,CAAC,EAAE;QACZ,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,GAAG,IAAI,CAAA;QAC9C,OAAO;YACL;;;;eAIG;YACH,WAAW;gBACT,MAAM,eAAe,GAAG,OAAO,CAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAA;gBAC5D,OAAO;oBACL,GAAG,gBAAgB,EAAE;oBACrB,aAAa,EAAE;wBACb,IAAI,EAAE,kBAAkB;wBACxB,eAAe;qBAChB;iBACF,CAAA;YACH,CAAC;SACF,CAAA;IACH,CAAC,CAAC,CAAA;AACN,CAAC"}
+{"version":3,"file":"stateModel.js","sourceRoot":"","sources":["../../src/LinearGCContentDisplay/stateModel.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,OAAO,GAER,MAAM,6BAA6B,CAAA;AAEpC,OAAO,EAAE,+BAA+B,EAAE,MAAM,wBAAwB,CAAA;AACxE,OAAO,EAAE,KAAK,EAAE,MAAM,iBAAiB,CAAA;AAEvC;;;;GAIG;AACH,MAAM,CAAC,OAAO,UAAU,iBAAiB,CACvC,aAA4B,EAC5B,YAAwC;IAExC,OAAO,KAAK;SACT,OAAO,CACN,wBAAwB,EACxB,+BAA+B,CAAC,aAAa,EAAE,YAAY,CAAC,EAC5D,KAAK,CAAC,KAAK,CAAC;QACV;;WAEG;QACH,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,wBAAwB,CAAC;KAC9C,CAAC,CACH;SACA,KAAK,CAAC,IAAI,CAAC,EAAE;QACZ,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,GAAG,IAAI,CAAA;QAC9C,OAAO;YACL;;;;eAIG;YACH,WAAW;gBACT,MAAM,eAAe,GAAG,OAAO,CAAC,IAAI,CAAC,WAAW,EAAE,SAAS,CAAC,CAAA;gBAC5D,OAAO;oBACL,GAAG,gBAAgB,EAAE;oBACrB,aAAa,EAAE;wBACb,IAAI,EAAE,kBAAkB;wBACxB,eAAe;qBAChB;iBACF,CAAA;YACH,CAAC;SACF,CAAA;IACH,CAAC,CAAC,CAAA;AACN,CAAC"}

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-gccontent",
-  "version": "2.4.2",
+  "version": "2.6.1",
   "description": "JBrowse 2 gccontent concepts",
   "keywords": [
     "jbrowse",
@@ -54,5 +54,5 @@
   "distModule": "esm/index.js",
   "srcModule": "src/index.ts",
   "module": "esm/index.js",
-  "gitHead": "36e382a70e7d220343b873e7e6aba5c83e5342c8"
+  "gitHead": "1cbe7ba097fb2d2763c776e5e429e4670cdd583c"
 }

package/src/GCContentAdapter/configSchema.ts

@@ -3,6 +3,7 @@ import { ConfigurationSchema } from '@jbrowse/core/configuration'
 
 /**
  * #config GCContentAdapter
+ * #category adapter
  */
 function x() {} // eslint-disable-line @typescript-eslint/no-unused-vars
 

package/src/LinearGCContentDisplay/config.ts

@@ -3,6 +3,7 @@ import PluginManager from '@jbrowse/core/PluginManager'
 
 /**
  * #config LinearGCContentDisplay
+ * #category display
  */
 export default function WiggleConfigFactory(pluginManager: PluginManager) {
   return ConfigurationSchema(

package/src/LinearGCContentDisplay/stateModel.ts

@@ -8,7 +8,8 @@ import { types } from 'mobx-state-tree'
 
 /**
  * #stateModel LinearGCContentDisplay
- * base model BaseWiggleDisplayModel
+ * #category display
+ * base model `BaseWiggleDisplayModel`
  */
 export default function stateModelFactory(
   pluginManager: PluginManager,