@jbrowse/plugin-gccontent 2.12.0 → 2.12.2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/GCContentAdapter/index.js +1 -1
- package/dist/GCContentTrack/configSchema.d.ts +1 -3
- package/dist/GCContentTrack/index.js +1 -1
- package/dist/LinearGCContentDisplay/config1.js +1 -1
- package/dist/LinearGCContentDisplay/config2.js +1 -1
- package/dist/LinearGCContentDisplay/index.js +1 -1
- package/dist/LinearGCContentDisplay/shared.d.ts +35 -32
- package/dist/LinearGCContentDisplay/shared.js +1 -1
- package/dist/LinearGCContentDisplay/stateModel1.d.ts +34 -29
- package/dist/LinearGCContentDisplay/stateModel1.js +1 -1
- package/dist/LinearGCContentDisplay/stateModel2.d.ts +34 -29
- package/dist/LinearGCContentDisplay/stateModel2.js +1 -1
- package/esm/GCContentTrack/configSchema.d.ts +1 -3
- package/esm/LinearGCContentDisplay/shared.d.ts +35 -32
- package/esm/LinearGCContentDisplay/stateModel1.d.ts +34 -29
- package/esm/LinearGCContentDisplay/stateModel2.d.ts +34 -29
- package/package.json +2 -2
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@@ -26,6 +26,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = GCContentAdapterF;
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const AdapterType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/AdapterType"));
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const configSchema_1 = __importDefault(require("./configSchema"));
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function GCContentAdapterF(pluginManager) {
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@@ -39,4 +40,3 @@ function GCContentAdapterF(pluginManager) {
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getAdapterClass: () => Promise.resolve().then(() => __importStar(require('./GCContentAdapter'))).then(r => r.default),
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}));
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}
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exports.default = GCContentAdapterF;
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = GCContentTrackF;
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const TrackType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/TrackType"));
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const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
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const configSchema_1 = __importDefault(require("./configSchema"));
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});
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});
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}
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exports.default = GCContentTrackF;
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"use strict";
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = LinearGCContentDisplay;
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const configuration_1 = require("@jbrowse/core/configuration");
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/**
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* #config LinearGCContentDisplay
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explicitlyTyped: true,
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});
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}
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exports.default = LinearGCContentDisplay;
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"use strict";
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = LinearGCContentTrackDisplayF;
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const configuration_1 = require("@jbrowse/core/configuration");
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/**
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* #config LinearGCContentTrackDisplay
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explicitlyTyped: true,
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});
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}
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exports.default = LinearGCContentTrackDisplayF;
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = LinearGCContentDisplayF;
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const pluggableElementTypes_1 = require("@jbrowse/core/pluggableElementTypes");
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const plugin_wiggle_1 = require("@jbrowse/plugin-wiggle");
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const config1_1 = __importDefault(require("./config1"));
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});
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});
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}
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exports.default = LinearGCContentDisplayF;
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/// <reference types="react" />
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import { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
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import PluginManager from '@jbrowse/core/PluginManager';
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/**
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@@ -35,7 +34,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
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}, {
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renderInProgress: AbortController | undefined;
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filled: boolean;
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reactElement: import("react").ReactElement
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reactElement: import("react").ReactElement | undefined;
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features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
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layout: any;
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status: string;
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error?: unknown;
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reload: () => void;
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message: import("react").ReactNode;
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filled?: boolean
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status?: string
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reactElement?: import("react").ReactElement
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filled?: boolean;
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status?: string;
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reactElement?: import("react").ReactElement;
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};
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}) => import("react").JSX.Element | undefined;
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renderProps: any;
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setLoading(abortController: AbortController): void;
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setMessage(messageText: string): void;
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setRendered(props: {
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reactElement: import("react").ReactElement
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reactElement: import("react").ReactElement;
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features: Map<string, import("@jbrowse/core/util").Feature>;
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layout: any;
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maxHeightReached: boolean;
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model: {
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id: string;
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type: string;
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rpcDriverName: string | undefined;
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* #property
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*/
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rpcDriverName: string | undefined;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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rendererTypeName: string;
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error: unknown;
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error: unknown;
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message: string | undefined;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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onHorizontalScroll?: Function
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blockState?: Record<string, any
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onHorizontalScroll?: Function;
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blockState?: Record<string, any>;
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}>;
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readonly DisplayBlurb: import("react").FC<{
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model: {
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readonly parentTrack: any;
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renderProps(): any;
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readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
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readonly DisplayMessageComponent: import("react").FC<any
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readonly DisplayMessageComponent: undefined | import("react").FC<any>;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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regionCannotBeRendered(): null;
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} & {
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setMessage(arg?: string
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setMessage(arg?: string): void;
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setError(error?: unknown): void;
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setRpcDriverName(rpcDriverName: string): void;
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reload(): void;
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setHeight(displayHeight: number): number;
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resizeHeight(distance: number): number;
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} & {
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featureDensityStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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featureDensityStats: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
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currStatsBpPerPx: number;
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} & {
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readonly currentBytesRequested: number;
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afterAttach(): void;
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} & {
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setCurrStatsBpPerPx(n: number): void;
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
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getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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setFeatureDensityStatsP(arg: any): void;
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setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
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clearFeatureDensityStats(): void;
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} & {
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readonly regionTooLarge: boolean;
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regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
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regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react").JSX.Element | null;
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} & {
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featureIdUnderMouse:
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contextMenuFeature: import("@jbrowse/core/util").Feature
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featureIdUnderMouse: undefined | string;
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contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
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} & {
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readonly blockType: "dynamicBlocks" | "staticBlocks";
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readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
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readonly renderDelay: number;
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readonly TooltipComponent: import("react").FC<any>;
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readonly selectedFeatureId: string | undefined;
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readonly DisplayMessageComponent: import("react").FC<any
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readonly DisplayMessageComponent: undefined | import("react").FC<any>;
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} & {
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readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
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readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
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selectFeature(feature: import("@jbrowse/core/util").Feature): void;
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navToFeature(feature: import("@jbrowse/core/util").Feature): void;
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clearFeatureSelection(): void;
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setFeatureIdUnderMouse(feature?: string
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setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature
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setFeatureIdUnderMouse(feature?: string): void;
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setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
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} & {
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reload(): Promise<void>;
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} & {
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renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react").JSX.Element>;
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afterAttach(): void;
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} & {
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message:
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message: undefined | string;
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stats: {
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scoreMin: number;
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scoreMax: number;
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} | undefined;
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statsFetchInProgress: undefined | AbortController;
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} & {
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updateQuantitativeStats(stats: {
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scoreMin: number;
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scoreMax: number;
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}): void;
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setColor(color?: string
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setPosColor(color?: string
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setNegColor(color?: string
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setColor(color?: string): void;
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setPosColor(color?: string): void;
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setNegColor(color?: string): void;
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setLoading(aborter: AbortController): void;
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selectFeature(feature: import("@jbrowse/core/util").Feature): void;
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setResolution(res: number): void;
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setFill(fill: number): void;
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toggleLogScale(): void;
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setScaleType(scale?: string
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setScaleType(scale?: string): void;
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setSummaryScoreMode(val: string): void;
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setAutoscale(val: string): void;
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setMaxScore(val?: number
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setMaxScore(val?: number): void;
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setRendererType(val: string): void;
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setMinScore(val?: number
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setMinScore(val?: number): void;
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toggleCrossHatches(): void;
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setCrossHatches(cross: boolean): void;
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} & {
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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setSubschema(slotName: string, data: unknown):
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setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
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} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
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} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
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readonly autoscaleType: any;
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} & {
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} & {
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readonly TooltipComponent: import("react").FC
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readonly TooltipComponent: import("react").FC;
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readonly rendererTypeName: string;
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} & {
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readonly ticks: {
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const util_1 = require("@jbrowse/core/util");
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const plugin_wiggle_1 = require("@jbrowse/plugin-wiggle");
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exports.default = SharedModelF;
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message: import("react").ReactNode;
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setMessage(messageText: string): void;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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}>;
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model: {
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readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
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readonly DisplayMessageComponent: undefined | import("react").FC<any>;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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regionCannotBeRendered(): null;
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featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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afterAttach(): void;
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
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getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
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regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react").JSX.Element | null;
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} & {
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} & {
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readonly blockType: "dynamicBlocks" | "staticBlocks";
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readonly TooltipComponent: import("react").FC<any>;
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readonly selectedFeatureId: string | undefined;
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readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
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readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
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selectFeature(feature: import("@jbrowse/core/util").Feature): void;
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navToFeature(feature: import("@jbrowse/core/util").Feature): void;
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clearFeatureSelection(): void;
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setFeatureIdUnderMouse(feature?: string
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setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature
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setFeatureIdUnderMouse(feature?: string): void;
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setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
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reload(): Promise<void>;
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renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react").JSX.Element>;
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afterAttach(): void;
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} & {
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message:
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message: undefined | string;
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stats: {
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scoreMin: number;
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scoreMax: number;
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} | undefined;
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statsFetchInProgress:
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statsFetchInProgress: undefined | AbortController;
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} & {
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updateQuantitativeStats(stats: {
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scoreMin: number;
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scoreMax: number;
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}): void;
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setColor(color?: string
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setPosColor(color?: string
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setNegColor(color?: string
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setColor(color?: string): void;
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setPosColor(color?: string): void;
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setLoading(aborter: AbortController): void;
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selectFeature(feature: import("@jbrowse/core/util").Feature): void;
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setResolution(res: number): void;
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toggleLogScale(): void;
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setScaleType(scale?: string
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setScaleType(scale?: string): void;
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setSummaryScoreMode(val: string): void;
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setAutoscale(val: string): void;
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setMaxScore(val?: number
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setMaxScore(val?: number): void;
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setRendererType(val: string): void;
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setMinScore(val?: number
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setMinScore(val?: number): void;
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toggleCrossHatches(): void;
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setCrossHatches(cross: boolean): void;
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} & {
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[x: string]: any;
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
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} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
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} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
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readonly autoscaleType: any;
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reload(): Promise<void>;
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} & {
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readonly TooltipComponent: import("react").FC
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readonly TooltipComponent: import("react").FC;
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readonly rendererTypeName: string;
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} & {
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readonly ticks: {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.default = stateModelF;
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const mobx_state_tree_1 = require("mobx-state-tree");
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// locals
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const shared_1 = __importDefault(require("./shared"));
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@@ -16,4 +17,3 @@ function stateModelF(pluginManager, configSchema) {
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type: mobx_state_tree_1.types.literal('LinearGCContentDisplay'),
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}));
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}
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exports.default = stateModelF;
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@@ -1,4 +1,3 @@
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1
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-
/// <reference types="react" />
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2
1
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import { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
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import PluginManager from '@jbrowse/core/PluginManager';
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/**
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@@ -39,7 +38,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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}, {
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renderInProgress: AbortController | undefined;
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filled: boolean;
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reactElement: import("react").ReactElement
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+
reactElement: import("react").ReactElement | undefined;
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features: Map<string, import("@jbrowse/core/util").Feature> | undefined;
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layout: any;
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status: string;
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@@ -51,9 +50,9 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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error?: unknown;
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reload: () => void;
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message: import("react").ReactNode;
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filled?: boolean
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status?: string
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reactElement?: import("react").ReactElement
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filled?: boolean;
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status?: string;
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reactElement?: import("react").ReactElement;
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};
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}) => import("react").JSX.Element | undefined;
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renderProps: any;
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@@ -64,7 +63,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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setLoading(abortController: AbortController): void;
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setMessage(messageText: string): void;
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setRendered(props: {
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reactElement: import("react").ReactElement
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reactElement: import("react").ReactElement;
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features: Map<string, import("@jbrowse/core/util").Feature>;
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layout: any;
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@@ -150,8 +149,8 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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error: unknown;
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message: string | undefined;
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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onHorizontalScroll?: Function
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blockState?: Record<string, any
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onHorizontalScroll?: Function;
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blockState?: Record<string, any>;
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}>;
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readonly DisplayBlurb: import("react").FC<{
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model: {
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@@ -176,12 +175,12 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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readonly parentTrack: any;
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renderProps(): any;
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readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
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readonly DisplayMessageComponent: import("react").FC<any
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+
readonly DisplayMessageComponent: undefined | import("react").FC<any>;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
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regionCannotBeRendered(): null;
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} & {
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setMessage(arg?: string
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setMessage(arg?: string): void;
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setError(error?: unknown): void;
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setRpcDriverName(rpcDriverName: string): void;
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reload(): void;
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@@ -194,8 +193,8 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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setHeight(displayHeight: number): number;
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resizeHeight(distance: number): number;
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} & {
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featureDensityStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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|
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featureDensityStats: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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+
featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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+
featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
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currStatsBpPerPx: number;
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} & {
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readonly currentBytesRequested: number;
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afterAttach(): void;
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} & {
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setCurrStatsBpPerPx(n: number): void;
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|
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
|
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|
+
setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
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getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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setFeatureDensityStatsP(arg: any): void;
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|
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setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
|
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+
setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
|
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clearFeatureDensityStats(): void;
|
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} & {
|
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readonly regionTooLarge: boolean;
|
|
@@ -219,8 +218,8 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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|
regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
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regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react").JSX.Element | null;
|
|
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|
} & {
|
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|
-
featureIdUnderMouse:
|
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|
-
contextMenuFeature: import("@jbrowse/core/util").Feature
|
|
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|
+
featureIdUnderMouse: undefined | string;
|
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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|
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|
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|
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featureIdUnderMouse:
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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setFeatureIdUnderMouse(feature?: string
|
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|
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setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature
|
|
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|
+
setFeatureIdUnderMouse(feature?: string): void;
|
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|
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|
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|
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|
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|
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|
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} | undefined;
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|
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statsFetchInProgress:
|
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|
+
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|
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|
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|
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setColor(color?: string
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|
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|
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|
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|
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setColor(color?: string): void;
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setScaleType(scale?: string
|
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|
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setScaleType(scale?: string): void;
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|
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setMinScore(val?: number
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setMinScore(val?: number): void;
|
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|
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|
|
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|
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|
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|
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|
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|
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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|
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|
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|
+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
|
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|
+
} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
|
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|
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|
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|
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|
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@@ -341,7 +344,7 @@ export default function SharedModelF(pluginManager: PluginManager, configSchema:
|
|
|
341
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|
} & {
|
|
342
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|
reload(): Promise<void>;
|
|
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|
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/// <reference types="react" />
|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
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|
+
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|
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|
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|
|
@@ -64,7 +63,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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|
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|
|
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}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
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}>;
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|
|
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|
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readonly DisplayMessageComponent: undefined | import("react").FC<any>;
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trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
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|
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setRpcDriverName(rpcDriverName: string): void;
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|
|
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|
setHeight(displayHeight: number): number;
|
|
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resizeHeight(distance: number): number;
|
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|
} & {
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|
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featureDensityStatsP: Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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|
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featureDensityStats: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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|
+
featureDensityStatsP: undefined | Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
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featureDensityStats: undefined | import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats;
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|
currStatsBpPerPx: number;
|
|
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|
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readonly currentBytesRequested: number;
|
|
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|
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|
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|
} & {
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|
setCurrStatsBpPerPx(n: number): void;
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|
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|
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setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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|
+
setFeatureDensityStatsLimit(stats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
|
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|
getFeatureDensityStats(): Promise<import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats>;
|
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|
|
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|
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setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats
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|
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|
+
setFeatureDensityStats(featureDensityStats?: import("@jbrowse/core/data_adapters/BaseAdapter").FeatureDensityStats): void;
|
|
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|
clearFeatureDensityStats(): void;
|
|
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} & {
|
|
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readonly regionTooLarge: boolean;
|
|
@@ -219,8 +218,8 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
|
|
|
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|
regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
|
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|
regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react").JSX.Element | null;
|
|
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|
} & {
|
|
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|
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featureIdUnderMouse:
|
|
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|
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contextMenuFeature: import("@jbrowse/core/util").Feature
|
|
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|
+
featureIdUnderMouse: undefined | string;
|
|
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|
+
contextMenuFeature: undefined | import("@jbrowse/core/util").Feature;
|
|
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|
} & {
|
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|
readonly blockType: "dynamicBlocks" | "staticBlocks";
|
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readonly blockDefinitions: import("@jbrowse/core/util/blockTypes").BlockSet;
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@@ -228,7 +227,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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228
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readonly renderDelay: number;
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229
228
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readonly TooltipComponent: import("react").FC<any>;
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230
229
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readonly selectedFeatureId: string | undefined;
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231
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-
readonly DisplayMessageComponent: import("react").FC<any
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230
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+
readonly DisplayMessageComponent: undefined | import("react").FC<any>;
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232
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} & {
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233
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readonly features: import("@jbrowse/core/util/compositeMap").default<string, import("@jbrowse/core/util").Feature>;
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readonly featureUnderMouse: import("@jbrowse/core/util").Feature | undefined;
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@@ -241,8 +240,8 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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selectFeature(feature: import("@jbrowse/core/util").Feature): void;
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navToFeature(feature: import("@jbrowse/core/util").Feature): void;
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clearFeatureSelection(): void;
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244
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-
setFeatureIdUnderMouse(feature?: string
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245
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-
setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature
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243
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+
setFeatureIdUnderMouse(feature?: string): void;
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244
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+
setContextMenuFeature(feature?: import("@jbrowse/core/util").Feature): void;
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246
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} & {
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reload(): Promise<void>;
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248
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} & {
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@@ -253,31 +252,31 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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renderSvg(opts: import("@jbrowse/plugin-linear-genome-view").ExportSvgDisplayOptions): Promise<import("react").JSX.Element>;
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254
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afterAttach(): void;
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255
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} & {
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256
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-
message:
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255
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+
message: undefined | string;
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257
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stats: {
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258
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scoreMin: number;
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259
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scoreMax: number;
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260
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} | undefined;
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261
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-
statsFetchInProgress:
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260
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+
statsFetchInProgress: undefined | AbortController;
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262
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} & {
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263
262
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updateQuantitativeStats(stats: {
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264
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scoreMin: number;
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265
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scoreMax: number;
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266
265
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}): void;
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267
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-
setColor(color?: string
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268
|
-
setPosColor(color?: string
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269
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-
setNegColor(color?: string
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|
266
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+
setColor(color?: string): void;
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267
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+
setPosColor(color?: string): void;
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268
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+
setNegColor(color?: string): void;
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270
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setLoading(aborter: AbortController): void;
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271
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selectFeature(feature: import("@jbrowse/core/util").Feature): void;
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272
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setResolution(res: number): void;
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273
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setFill(fill: number): void;
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274
273
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toggleLogScale(): void;
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275
|
-
setScaleType(scale?: string
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|
274
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+
setScaleType(scale?: string): void;
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276
275
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setSummaryScoreMode(val: string): void;
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277
276
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setAutoscale(val: string): void;
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278
|
-
setMaxScore(val?: number
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|
277
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+
setMaxScore(val?: number): void;
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279
278
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setRendererType(val: string): void;
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280
|
-
setMinScore(val?: number
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|
279
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+
setMinScore(val?: number): void;
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281
280
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toggleCrossHatches(): void;
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|
282
281
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setCrossHatches(cross: boolean): void;
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|
283
282
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} & {
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@@ -292,7 +291,13 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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292
291
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readonly rendererConfig: {
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|
293
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[x: string]: any;
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294
293
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} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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|
295
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-
setSubschema(slotName: string, data: unknown):
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294
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+
setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
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295
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+
[x: string]: any;
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|
296
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+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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|
297
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+
setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
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|
298
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+
[x: string]: any;
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|
299
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+
} & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
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|
300
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+
} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
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|
296
301
|
} & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
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297
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readonly autoscaleType: any;
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|
298
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} & {
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@@ -339,7 +344,7 @@ export default function stateModelF(pluginManager: PluginManager, configSchema:
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|
|
339
344
|
} & {
|
|
340
345
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reload(): Promise<void>;
|
|
341
346
|
} & {
|
|
342
|
-
readonly TooltipComponent: import("react").FC
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|
347
|
+
readonly TooltipComponent: import("react").FC;
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|
343
348
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readonly rendererTypeName: string;
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|
344
349
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} & {
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|
345
350
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readonly ticks: {
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package/package.json
CHANGED
|
@@ -1,6 +1,6 @@
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1
1
|
{
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|
2
2
|
"name": "@jbrowse/plugin-gccontent",
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|
3
|
-
"version": "2.12.
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|
3
|
+
"version": "2.12.2",
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|
4
4
|
"description": "JBrowse 2 gccontent concepts",
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|
5
5
|
"keywords": [
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|
6
6
|
"jbrowse",
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|
@@ -53,5 +53,5 @@
|
|
|
53
53
|
"distModule": "esm/index.js",
|
|
54
54
|
"srcModule": "src/index.ts",
|
|
55
55
|
"module": "esm/index.js",
|
|
56
|
-
"gitHead": "
|
|
56
|
+
"gitHead": "1ec66736ce048a1637f52b7a7ef2eb02d956b771"
|
|
57
57
|
}
|