@jbrowse/plugin-dotplot-view 3.1.0 → 3.2.0

package/dist/DotplotView/components/WarningDialog.js

@@ -15,8 +15,8 @@ const useStyles = (0, mui_1.makeStyles)()({
 });
 function getTrackWarnings({ trackWarnings, }) {
     const rows = [];
-    for (let i = 0; i < trackWarnings.length; i++) {
-        const track = trackWarnings[i];
+    for (const [i, trackWarning] of trackWarnings.entries()) {
+        const track = trackWarning;
         const name = (0, configuration_1.getConf)(track, 'name');
         const d = track.displays[0];
         for (let j = 0; j < d.warnings.length; j++) {

package/dist/DotplotView/model.js

@@ -246,11 +246,13 @@ function stateModelFactory(pm) {
         hideTrack(trackId) {
             const schema = pm.pluggableConfigSchemaType('track');
             const conf = (0, mobx_state_tree_1.resolveIdentifier)(schema, (0, mobx_state_tree_1.getRoot)(self), trackId);
-            const t = self.tracks.filter(t => t.configuration === conf);
+            const tracks = self.tracks.filter(t => t.configuration === conf);
             (0, mobx_1.transaction)(() => {
-                t.forEach(t => self.tracks.remove(t));
+                for (const track of tracks) {
+                    self.tracks.remove(track);
+                }
             });
-            return t.length;
+            return tracks.length;
         },
         toggleTrack(trackId) {
             const hiddenCount = this.hideTrack(trackId);
@@ -387,11 +389,11 @@ function stateModelFactory(pm) {
                 }
                 const views = [self.hview, self.vview];
                 (0, mobx_1.transaction)(() => {
-                    self.assemblyNames.forEach((name, index) => {
+                    for (const [index, name] of self.assemblyNames.entries()) {
                         const assembly = session.assemblyManager.get(name);
                         const view = views[index];
                         view.setDisplayedRegions((assembly === null || assembly === void 0 ? void 0 : assembly.regions) || []);
-                    });
+                    }
                     self.showAllRegions();
                 });
             }, { delay: 1000 }));

package/dist/LaunchDotplotView.js

@@ -15,9 +15,9 @@ function LaunchDotplotView(pluginManager) {
                 model.setAssemblyNames(assemblyNames[0], assemblyNames[1]);
             });
             const idsNotFound = [];
-            tracks.forEach(track => {
+            for (const track of tracks) {
                 tryTrack(model, track, idsNotFound);
-            });
+            }
             if (idsNotFound.length) {
                 throw new Error(`Could not resolve identifiers: ${idsNotFound.join(',')}`);
             }

package/esm/DotplotView/components/WarningDialog.js

@@ -13,8 +13,8 @@ const useStyles = makeStyles()({
 });
 function getTrackWarnings({ trackWarnings, }) {
     const rows = [];
-    for (let i = 0; i < trackWarnings.length; i++) {
-        const track = trackWarnings[i];
+    for (const [i, trackWarning] of trackWarnings.entries()) {
+        const track = trackWarning;
         const name = getConf(track, 'name');
         const d = track.displays[0];
         for (let j = 0; j < d.warnings.length; j++) {

package/esm/DotplotView/model.js

@@ -206,11 +206,13 @@ export default function stateModelFactory(pm) {
         hideTrack(trackId) {
             const schema = pm.pluggableConfigSchemaType('track');
             const conf = resolveIdentifier(schema, getRoot(self), trackId);
-            const t = self.tracks.filter(t => t.configuration === conf);
+            const tracks = self.tracks.filter(t => t.configuration === conf);
             transaction(() => {
-                t.forEach(t => self.tracks.remove(t));
+                for (const track of tracks) {
+                    self.tracks.remove(track);
+                }
             });
-            return t.length;
+            return tracks.length;
         },
         toggleTrack(trackId) {
             const hiddenCount = this.hideTrack(trackId);
@@ -347,11 +349,11 @@ export default function stateModelFactory(pm) {
                 }
                 const views = [self.hview, self.vview];
                 transaction(() => {
-                    self.assemblyNames.forEach((name, index) => {
+                    for (const [index, name] of self.assemblyNames.entries()) {
                         const assembly = session.assemblyManager.get(name);
                         const view = views[index];
                         view.setDisplayedRegions((assembly === null || assembly === void 0 ? void 0 : assembly.regions) || []);
-                    });
+                    }
                     self.showAllRegions();
                 });
             }, { delay: 1000 }));

package/esm/LaunchDotplotView.js

@@ -12,9 +12,9 @@ export default function LaunchDotplotView(pluginManager) {
                 model.setAssemblyNames(assemblyNames[0], assemblyNames[1]);
             });
             const idsNotFound = [];
-            tracks.forEach(track => {
+            for (const track of tracks) {
                 tryTrack(model, track, idsNotFound);
-            });
+            }
             if (idsNotFound.length) {
                 throw new Error(`Could not resolve identifiers: ${idsNotFound.join(',')}`);
             }

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-dotplot-view",
-  "version": "3.1.0",
+  "version": "3.2.0",
   "description": "JBrowse 2 dotplot view",
   "keywords": [
     "jbrowse",
@@ -36,8 +36,8 @@
     "clean": "rimraf dist esm *.tsbuildinfo"
   },
   "dependencies": {
-    "@jbrowse/core": "^3.1.0",
-    "@jbrowse/plugin-alignments": "^3.1.0",
+    "@jbrowse/core": "^3.2.0",
+    "@jbrowse/plugin-alignments": "^3.2.0",
     "@mui/icons-material": "^6.0.0",
     "@mui/material": "^6.0.0",
     "@mui/x-data-grid": "^7.0.0",
@@ -59,5 +59,5 @@
   "publishConfig": {
     "access": "public"
   },
-  "gitHead": "91492049ddea0aed90eb24d3c066c2d9f5a6b189"
+  "gitHead": "c750e3f56706a490c19ba75abd807fec5e38aebf"
 }