@jbrowse/plugin-data-management 2.4.2 → 2.6.1

package/esm/HierarchicalTrackSelectorWidget/model.js

@@ -1,6 +1,6 @@
 import { types, getSnapshot } from 'mobx-state-tree';
 import { getConf, readConfObject, } from '@jbrowse/core/configuration';
-import { dedupe, getSession, getEnv, } from '@jbrowse/core/util';
+import { dedupe, getSession, getEnv, notEmpty, } from '@jbrowse/core/util';
 import { getTrackName } from '@jbrowse/core/util/tracks';
 import { ElementId } from '@jbrowse/core/util/types/mst';
 function hasAnyOverlap(a1 = [], a2 = []) {
@@ -20,19 +20,25 @@ export function matches(query, conf, session) {
     return (getTrackName(conf, session).toLowerCase().includes(queryLower) ||
         !!(categories === null || categories === void 0 ? void 0 : categories.filter(c => c.toLowerCase().includes(queryLower)).length));
 }
-function filterTracks(tracks, self, assemblyName) {
+function filterTracks(tracks, self) {
     const { assemblyManager } = getSession(self);
     const { pluginManager } = getEnv(self);
-    const assembly = assemblyManager.get(assemblyName);
-    if (!assembly) {
-        return [];
-    }
-    const { allAliases } = assembly;
+    const { view } = self;
+    const { trackSelectorAnyOverlap } = view;
+    const trackListAssemblies = self.assemblyNames
+        .map(a => assemblyManager.get(a))
+        .filter(notEmpty);
     return tracks
-        .filter(c => hasAnyOverlap(allAliases, readConfObject(c, 'assemblyNames')))
         .filter(c => {
-        const { displayTypes } = pluginManager.getViewType(self.view.type);
-        const compatDisplays = displayTypes.map((d) => d.name);
+        const trackAssemblyNames = readConfObject(c, 'assemblyNames');
+        const trackAssemblies = new Set((trackAssemblyNames === null || trackAssemblyNames === void 0 ? void 0 : trackAssemblyNames.map(name => assemblyManager.get(name)).filter(notEmpty)) || []);
+        return trackSelectorAnyOverlap
+            ? trackListAssemblies.some(a => trackAssemblies.has(a))
+            : trackListAssemblies.every(a => trackAssemblies.has(a));
+    })
+        .filter(c => {
+        const { displayTypes } = pluginManager.getViewType(view.type);
+        const compatDisplays = displayTypes.map(d => d.name);
         const trackDisplays = c.displays.map((d) => d.type);
         return hasAnyOverlap(compatDisplays, trackDisplays);
     });
@@ -84,12 +90,27 @@ export function generateHierarchy(model, trackConfigurations, collapsed, extra)
     });
     return hierarchy.children;
 }
+/**
+ * #stateModel HierarchicalTrackSelectorWidget
+ */
 export default function stateTreeFactory(pluginManager) {
     return types
         .model('HierarchicalTrackSelectorWidget', {
+        /**
+         * #property
+         */
         id: ElementId,
+        /**
+         * #property
+         */
         type: types.literal('HierarchicalTrackSelectorWidget'),
+        /**
+         * #property
+         */
         collapsed: types.map(types.boolean),
+        /**
+         * #property
+         */
         view: types.safeReference(pluginManager.pluggableMstType('view', 'stateModel')),
     })
         .volatile(() => ({
@@ -97,32 +118,59 @@ export default function stateTreeFactory(pluginManager) {
         filterText: '',
     }))
         .actions(self => ({
+        /**
+         * #action
+         */
         setSelection(elt) {
             self.selection = elt;
         },
+        /**
+         * #action
+         */
         addToSelection(elt) {
             self.selection = dedupe([...self.selection, ...elt], e => e.trackId);
         },
+        /**
+         * #action
+         */
         removeFromSelection(elt) {
             self.selection = self.selection.filter(f => !elt.includes(f));
         },
+        /**
+         * #action
+         */
         clearSelection() {
             self.selection = [];
         },
+        /**
+         * #action
+         */
         setView(view) {
             self.view = view;
         },
+        /**
+         * #action
+         */
         toggleCategory(pathName) {
             self.collapsed.set(pathName, !self.collapsed.get(pathName));
         },
+        /**
+         * #action
+         */
         clearFilterText() {
             self.filterText = '';
         },
+        /**
+         * #action
+         */
         setFilterText(newText) {
             self.filterText = newText;
         },
     }))
         .views(self => ({
+        /**
+         * #method
+         */
         getRefSeqTrackConf(assemblyName) {
             const { assemblyManager } = getSession(self);
             const assembly = assemblyManager.get(assemblyName);
@@ -136,58 +184,56 @@ export default function stateTreeFactory(pluginManager) {
                     return trackConf;
                 }
             }
+            return undefined;
         },
     }))
         .views(self => ({
-        trackConfigurations(assemblyName) {
-            if (!self.view) {
-                return [];
-            }
-            const { tracks, assemblyManager } = getSession(self);
-            const assembly = assemblyManager.get(assemblyName);
-            if (!assembly) {
-                return [];
-            }
-            const refseq = self.getRefSeqTrackConf(assemblyName);
-            // filter out tracks that don't match the current assembly (check all
-            // assembly aliases) and display types
-            return [
-                ...(refseq ? [refseq] : []),
-                ...filterTracks(tracks, self, assemblyName),
-            ];
-        },
+        /**
+         * #getter
+         */
         get assemblyNames() {
             var _a;
             return ((_a = self.view) === null || _a === void 0 ? void 0 : _a.assemblyNames) || [];
         },
-        connectionTrackConfigurations(assemblyName, connection) {
-            if (!self.view) {
-                return [];
-            }
-            // filter out tracks that don't match the current display types
-            return filterTracks(connection.tracks, self, assemblyName);
+    }))
+        .views(self => ({
+        /**
+         * #method
+         * filter out tracks that don't match the current display types
+         */
+        connectionTrackConfigurations(connection) {
+            return !self.view ? [] : filterTracks(connection.tracks, self);
+        },
+        /**
+         * #getter
+         * filter out tracks that don't match the current assembly/display types
+         */
+        get trackConfigurations() {
+            return !self.view
+                ? []
+                : [
+                    ...self.assemblyNames.map(a => self.getRefSeqTrackConf(a)),
+                    ...filterTracks(getSession(self).tracks, self),
+                ].filter(notEmpty);
         },
     }))
         .views(self => ({
-        hierarchy(assemblyName) {
-            const hier = generateHierarchy(
-            // eslint-disable-next-line @typescript-eslint/no-explicit-any
-            self, self.trackConfigurations(assemblyName), self.collapsed);
+        /**
+         * #getter
+         */
+        get hierarchy() {
+            const hier = generateHierarchy(self, self.trackConfigurations, self.collapsed);
             const session = getSession(self);
             const { connectionInstances } = session;
-            const { assemblyManager } = getSession(self);
-            const assembly = assemblyManager.get(assemblyName);
-            const conns = (assembly &&
-                (connectionInstances === null || connectionInstances === void 0 ? void 0 : connectionInstances.map(c => ({
-                    // @ts-expect-error
-                    id: getSnapshot(c).configuration,
-                    name: getConf(c, 'name'),
-                    children: this.connectionHierarchy(assemblyName, c),
-                    state: {
-                        expanded: true,
-                    },
-                })).filter(f => f.children.length))) ||
-                [];
+            const conns = (connectionInstances === null || connectionInstances === void 0 ? void 0 : connectionInstances.map(c => ({
+                // @ts-expect-error
+                id: getSnapshot(c).configuration,
+                name: getConf(c, 'name'),
+                children: this.connectionHierarchy(c),
+                state: {
+                    expanded: true,
+                },
+            })).filter(f => f.children.length)) || [];
             return {
                 name: 'Root',
                 id: 'Root',
@@ -197,10 +243,11 @@ export default function stateTreeFactory(pluginManager) {
                 ],
             };
         },
-        connectionHierarchy(assemblyName, connection) {
-            return generateHierarchy(
-            // eslint-disable-next-line @typescript-eslint/no-explicit-any
-            self, self.connectionTrackConfigurations(assemblyName, connection), self.collapsed, connection.name);
+        /**
+         * #method
+         */
+        connectionHierarchy(connection) {
+            return generateHierarchy(self, self.connectionTrackConfigurations(connection), self.collapsed, connection.name);
         },
     }));
 }

package/esm/HierarchicalTrackSelectorWidget/model.js.map

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+{"version":3,"file":"model.js","sourceRoot":"","sources":["../../src/HierarchicalTrackSelectorWidget/model.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,KAAK,EAAE,WAAW,EAAY,MAAM,iBAAiB,CAAA;AAC9D,OAAO,EACL,OAAO,EACP,cAAc,GAEf,MAAM,6BAA6B,CAAA;AACpC,OAAO,EAEL,MAAM,EACN,UAAU,EACV,MAAM,EACN,QAAQ,GACT,MAAM,oBAAoB,CAAA;AAC3B,OAAO,EAAE,YAAY,EAAE,MAAM,2BAA2B,CAAA;AACxD,OAAO,EAAE,SAAS,EAAE,MAAM,8BAA8B,CAAA;AAGxD,SAAS,aAAa,CAAI,KAAU,EAAE,EAAE,KAAU,EAAE;IAClD,iEAAiE;IACjE,iCAAiC;IACjC,IAAI,EAAE,CAAC,CAAC,CAAC,KAAK,EAAE,CAAC,CAAC,CAAC,EAAE;QACnB,OAAO,IAAI,CAAA;KACZ;SAAM;QACL,MAAM,EAAE,GAAG,IAAI,GAAG,CAAC,EAAE,CAAC,CAAA;QACtB,OAAO,EAAE,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAA;KAC/B;AACH,CAAC;AAED,MAAM,UAAU,OAAO,CACrB,KAAa,EACb,IAA2B,EAC3B,OAA6B;IAE7B,MAAM,UAAU,GAAG,cAAc,CAAC,IAAI,EAAE,UAAU,CAAyB,CAAA;IAC3E,MAAM,UAAU,GAAG,KAAK,CAAC,WAAW,EAAE,CAAA;IACtC,OAAO,CACL,YAAY,CAAC,IAAI,EAAE,OAAO,CAAC,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,UAAU,CAAC;QAC9D,CAAC,CAAC,CAAA,UAAU,aAAV,UAAU,uBAAV,UAAU,CAAE,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,UAAU,CAAC,EAAE,MAAM,CAAA,CACvE,CAAA;AACH,CAAC;AAWD,SAAS,YAAY,CACnB,MAA+B,EAC/B,IAGC;IAED,MAAM,EAAE,eAAe,EAAE,GAAG,UAAU,CAAC,IAAI,CAAC,CAAA;IAC5C,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,IAAI,CAAC,CAAA;IACtC,MAAM,EAAE,IAAI,EAAE,GAAG,IAAI,CAAA;IACrB,MAAM,EAAE,uBAAuB,EAAE,GAAG,IAAI,CAAA;IACxC,MAAM,mBAAmB,GAAG,IAAI,CAAC,aAAa;SAC3C,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,eAAe,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;SAChC,MAAM,CAAC,QAAQ,CAAC,CAAA;IAEnB,OAAO,MAAM;SACV,MAAM,CAAC,CAAC,CAAC,EAAE;QACV,MAAM,kBAAkB,GAAG,cAAc,CAAC,CAAC,EAAE,eAAe,CAAa,CAAA;QACzE,MAAM,eAAe,GAAG,IAAI,GAAG,CAC7B,CAAA,kBAAkB,aAAlB,kBAAkB,uBAAlB,kBAAkB,CACd,GAAG,CAAC,IAAI,CAAC,EAAE,CAAC,eAAe,CAAC,GAAG,CAAC,IAAI,CAAC,EACtC,MAAM,CAAC,QAAQ,CAAC,KAAI,EAAE,CAC1B,CAAA;QACD,OAAO,uBAAuB;YAC5B,CAAC,CAAC,mBAAmB,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,eAAe,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;YACvD,CAAC,CAAC,mBAAmB,CAAC,KAAK,CAAC,CAAC,CAAC,EAAE,CAAC,eAAe,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAA;IAC5D,CAAC,CAAC;SACD,MAAM,CAAC,CAAC,CAAC,EAAE;QACV,MAAM,EAAE,YAAY,EAAE,GAAG,aAAa,CAAC,WAAW,CAAC,IAAI,CAAC,IAAI,CAAC,CAAA;QAC7D,MAAM,cAAc,GAAG,YAAY,CAAC,GAAG,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAA;QACpD,MAAM,aAAa,GAAG,CAAC,CAAC,QAAQ,CAAC,GAAG,CAAC,CAAC,CAAmB,EAAE,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,CAAA;QACrE,OAAO,aAAa,CAAC,cAAc,EAAE,aAAa,CAAC,CAAA;IACrD,CAAC,CAAC,CAAA;AACN,CAAC;AAED,MAAM,UAAU,iBAAiB,CAC/B,KAAqC,EACrC,mBAA4C,EAC5C,SAAwD,EACxD,KAAc;IAEd,MAAM,SAAS,GAAG,EAAE,QAAQ,EAAE,EAAgB,EAAc,CAAA;IAC5D,MAAM,EAAE,UAAU,EAAE,IAAI,EAAE,GAAG,KAAK,CAAA;IAClC,MAAM,OAAO,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IAEjC,mBAAmB;SAChB,MAAM,CAAC,IAAI,CAAC,EAAE,CAAC,OAAO,CAAC,UAAU,EAAE,IAAI,EAAE,OAAO,CAAC,CAAC;SAClD,OAAO,CAAC,IAAI,CAAC,EAAE;QACd,iEAAiE;QACjE,MAAM,UAAU,GAAG,CAAC,GAAG,CAAC,cAAc,CAAC,IAAI,EAAE,UAAU,CAAC,IAAI,EAAE,CAAC,CAAC,CAAA;QAEhE,uEAAuE;QACvE,kEAAkE;QAClE,0BAA0B;QAC1B,IAAI,IAAI,CAAC,OAAO,CAAC,QAAQ,CAAC,cAAc,CAAC,EAAE;YACzC,UAAU,CAAC,OAAO,CAAC,iBAAiB,CAAC,CAAA;SACtC;QAED,IAAI,SAAS,GAAG,SAAS,CAAA;QAEzB,wDAAwD;QACxD,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,UAAU,CAAC,MAAM,EAAE,CAAC,EAAE,EAAE;YAC1C,MAAM,QAAQ,GAAG,UAAU,CAAC,CAAC,CAAC,CAAA;YAC9B,MAAM,GAAG,GAAG,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,KAAK,QAAQ,CAAC,CAAA;YAC7D,MAAM,EAAE,GAAG,KAAK,GAAG,GAAG,GAAG,UAAU,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,CAAC,IAAI,CAAC,GAAG,CAAC,CAAA;YAC7D,IAAI,CAAC,GAAG,EAAE;gBACR,MAAM,CAAC,GAAG;oBACR,QAAQ,EAAE,EAAE;oBACZ,IAAI,EAAE,QAAQ;oBACd,EAAE;oBACF,eAAe,EAAE,CAAC,SAAS,CAAC,GAAG,CAAC,EAAE,CAAC;iBACpC,CAAA;gBACD,SAAS,CAAC,QAAQ,CAAC,IAAI,CAAC,CAAC,CAAC,CAAA;gBAC1B,SAAS,GAAG,CAAC,CAAA;aACd;iBAAM;gBACL,SAAS,GAAG,GAAG,CAAA;aAChB;SACF;QACD,MAAM,MAAM,GAAG,IAAI,CAAC,MAAoD,CAAA;QAExE,uEAAuE;QACvE,SAAS,CAAC,QAAQ,CAAC,MAAM,CACvB,SAAS,CAAC,QAAQ,CAAC,SAAS,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,QAAQ,CAAC,MAAM,CAAC,EACxD,CAAC,EACD;YACE,EAAE,EAAE,IAAI,CAAC,OAAO;YAChB,IAAI,EAAE,YAAY,CAAC,IAAI,EAAE,OAAO,CAAC;YACjC,IAAI;YACJ,OAAO,EAAE,MAAM,CAAC,IAAI,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,aAAa,KAAK,IAAI,CAAC;YACnD,QAAQ,EAAE,EAAE;SACb,CACF,CAAA;IACH,CAAC,CAAC,CAAA;IAEJ,OAAO,SAAS,CAAC,QAAQ,CAAA;AAC3B,CAAC;AAED;;GAEG;AACH,MAAM,CAAC,OAAO,UAAU,gBAAgB,CAAC,aAA4B;IACnE,OAAO,KAAK;SACT,KAAK,CAAC,iCAAiC,EAAE;QACxC;;WAEG;QACH,EAAE,EAAE,SAAS;QACb;;WAEG;QACH,IAAI,EAAE,KAAK,CAAC,OAAO,CAAC,iCAAiC,CAAC;QACtD;;WAEG;QACH,SAAS,EAAE,KAAK,CAAC,GAAG,CAAC,KAAK,CAAC,OAAO,CAAC;QACnC;;WAEG;QACH,IAAI,EAAE,KAAK,CAAC,aAAa,CACvB,aAAa,CAAC,gBAAgB,CAAC,MAAM,EAAE,YAAY,CAAC,CACrD;KACF,CAAC;SACD,QAAQ,CAAC,GAAG,EAAE,CAAC,CAAC;QACf,SAAS,EAAE,EAA6B;QACxC,UAAU,EAAE,EAAE;KACf,CAAC,CAAC;SACF,OAAO,CAAC,IAAI,CAAC,EAAE,CAAC,CAAC;QAChB;;WAEG;QACH,YAAY,CAAC,GAA4B;YACvC,IAAI,CAAC,SAAS,GAAG,GAAG,CAAA;QACtB,CAAC;QACD;;WAEG;QACH,cAAc,CAAC,GAA4B;YACzC,IAAI,CAAC,SAAS,GAAG,MAAM,CAAC,CAAC,GAAG,IAAI,CAAC,SAAS,EAAE,GAAG,GAAG,CAAC,EAAE,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,CAAA;QACtE,CAAC;QACD;;WAEG;QACH,mBAAmB,CAAC,GAA4B;YAC9C,IAAI,CAAC,SAAS,GAAG,IAAI,CAAC,SAAS,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC,GAAG,CAAC,QAAQ,CAAC,CA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package/esm/PluginStoreWidget/components/CustomPluginForm.d.ts

@@ -1,9 +1,9 @@
-/// <reference types="react" />
+import React from 'react';
 import { PluginStoreModel } from '../model';
 declare function CustomPluginForm({ open, onClose, model, }: {
     open: boolean;
     onClose(): void;
     model: PluginStoreModel;
-}): JSX.Element;
+}): React.JSX.Element;
 declare const _default: typeof CustomPluginForm;
 export default _default;

package/esm/PluginStoreWidget/components/CustomPluginForm.js

@@ -1,7 +1,8 @@
 import React, { useState } from 'react';
 import { observer } from 'mobx-react';
 import { getRoot } from 'mobx-state-tree';
-import { Button, Collapse, Dialog, DialogActions, DialogContent, DialogContentText, TextField, } from '@mui/material';
+import { Dialog } from '@jbrowse/core/ui';
+import { Button, Collapse, DialogActions, DialogContent, DialogContentText, TextField, } from '@mui/material';
 import { makeStyles } from 'tss-react/mui';
 // icons
 import IconButton from '@mui/material/IconButton';
@@ -29,43 +30,19 @@ function CustomPluginForm({ open, onClose, model, }) {
     const [esmPluginUrl, setESMPluginUrl] = useState('');
     const [cjsPluginUrl, setCJSPluginUrl] = useState('');
     const [advancedOptionsOpen, setAdvancedOptionsOpen] = useState(false);
-    function handleChange(event) {
-        const { name, value } = event.target;
-        if (name === 'umdName') {
-            setUMDPluginName(value);
-        }
-        if (name === 'umdUrl') {
-            setUMDPluginUrl(value);
-        }
-        if (name === 'esmUrl') {
-            setESMPluginUrl(value);
-        }
-        if (name === 'cjsUrl') {
-            setCJSPluginUrl(value);
-        }
-    }
-    function handleOpenAdvancedOptions() {
-        setAdvancedOptionsOpen(!advancedOptionsOpen);
-    }
     // eslint-disable-next-line @typescript-eslint/no-explicit-any
     const { jbrowse } = getRoot(model);
     const ready = Boolean((umdPluginName && umdPluginUrl) || esmPluginUrl || cjsPluginUrl);
     function handleSubmit() {
-        if (!ready) {
-            return;
-        }
-        const pluginDefinition = {};
         if (umdPluginName && umdPluginUrl) {
-            pluginDefinition.name = umdPluginName;
-            pluginDefinition.umdUrl = umdPluginUrl;
+            jbrowse.addPlugin({ name: umdPluginName, umdUrl: umdPluginUrl });
         }
         if (esmPluginUrl) {
-            pluginDefinition.esmUrl = esmPluginUrl;
+            jbrowse.addPlugin({ esmUrl: esmPluginUrl });
         }
         if (cjsPluginUrl) {
-            pluginDefinition.cjsUrl = cjsPluginUrl;
+            jbrowse.addPlugin({ cjsUrl: cjsPluginUrl });
         }
-        jbrowse.addPlugin(pluginDefinition);
     }
     function handleClose() {
         setUMDPluginName('');
@@ -78,9 +55,9 @@ function CustomPluginForm({ open, onClose, model, }) {
         React.createElement("form", { onSubmit: handleSubmit },
             React.createElement(DialogContent, { className: classes.dialogContent },
                 React.createElement(DialogContentText, null, "Enter the name of the plugin and its URL. The name should match what is defined in the plugin's build."),
-                React.createElement(TextField, { id: "umd-name-input", name: "umdName", label: "Plugin name", variant: "outlined", value: umdPluginName, onChange: handleChange }),
-                React.createElement(TextField, { id: "umd-url-input", name: "umdUrl", label: "Plugin URL", variant: "outlined", value: umdPluginUrl, onChange: handleChange }),
-                React.createElement(DialogContentText, { onClick: handleOpenAdvancedOptions },
+                React.createElement(TextField, { id: "umd-name-input", name: "umdName", label: "Plugin name", variant: "outlined", value: umdPluginName, onChange: event => setUMDPluginName(event.target.value) }),
+                React.createElement(TextField, { id: "umd-url-input", name: "umdUrl", label: "Plugin URL", variant: "outlined", value: umdPluginUrl, onChange: event => setUMDPluginUrl(event.target.value) }),
+                React.createElement(DialogContentText, { onClick: () => setAdvancedOptionsOpen(!advancedOptionsOpen) },
                     React.createElement(IconButton, { className: cx(classes.expand, {
                             [classes.expandOpen]: advancedOptionsOpen,
                         }), "aria-expanded": advancedOptionsOpen, "aria-label": "show more" },
@@ -89,8 +66,8 @@ function CustomPluginForm({ open, onClose, model, }) {
                 React.createElement(Collapse, { in: advancedOptionsOpen },
                     React.createElement("div", { className: classes.dialogContent },
                         React.createElement(DialogContentText, null, "The above fields assume that the plugin is built in UMD format. If your plugin is in another format, or you have additional builds you want to add (such as a CJS build for using NodeJS APIs in desktop), you can enter the URLs for those builds below."),
-                        React.createElement(TextField, { id: "esm-url-input", name: "esmUrl", label: "ESM build URL", variant: "outlined", value: esmPluginUrl, onChange: handleChange }),
-                        React.createElement(TextField, { id: "cjs-url-input", name: "cjsUrl", label: "CJS build URL", variant: "outlined", value: cjsPluginUrl, onChange: handleChange })))),
+                        React.createElement(TextField, { id: "esm-url-input", name: "esmUrl", label: "ESM build URL", variant: "outlined", value: esmPluginUrl, onChange: event => setESMPluginUrl(event.target.value) }),
+                        React.createElement(TextField, { id: "cjs-url-input", name: "cjsUrl", label: "CJS build URL", variant: "outlined", value: cjsPluginUrl, onChange: event => setCJSPluginUrl(event.target.value) })))),
             React.createElement(DialogActions, null,
                 React.createElement(Button, { variant: "contained", onClick: handleClose }, "Cancel"),
                 React.createElement(Button, { variant: "contained", color: "primary", onClick: handleSubmit, disabled: !ready }, "Submit")))));

package/esm/PluginStoreWidget/components/CustomPluginForm.js.map

@@ -1 +1 @@
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+{"version":3,"file":"CustomPluginForm.js","sourceRoot":"","sources":["../../../src/PluginStoreWidget/components/CustomPluginForm.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,OAAO,CAAA;AACvC,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,OAAO,EAAE,MAAM,iBAAiB,CAAA;AACzC,OAAO,EAAE,MAAM,EAAE,MAAM,kBAAkB,CAAA;AACzC,OAAO,EACL,MAAM,EACN,QAAQ,EACR,aAAa,EACb,aAAa,EACb,iBAAiB,EACjB,SAAS,GACV,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAE1C,QAAQ;AACR,OAAO,UAAU,MAAM,0BAA0B,CAAA;AACjD,OAAO,cAAc,MAAM,gCAAgC,CAAA;AAK3D,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,aAAa,EAAE;QACb,OAAO,EAAE,MAAM;QACf,aAAa,EAAE,QAAQ;KACxB;IACD,MAAM,EAAE;QACN,SAAS,EAAE,cAAc;QACzB,UAAU,EAAE,MAAM;QAClB,UAAU,EAAE,KAAK,CAAC,WAAW,CAAC,MAAM,CAAC,WAAW,EAAE;YAChD,QAAQ,EAAE,KAAK,CAAC,WAAW,CAAC,QAAQ,CAAC,QAAQ;SAC9C,CAAC;KACH;IACD,UAAU,EAAE;QACV,SAAS,EAAE,gBAAgB;KAC5B;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,gBAAgB,CAAC,EACxB,IAAI,EACJ,OAAO,EACP,KAAK,GAKN;IACC,MAAM,EAAE,OAAO,EAAE,EAAE,EAAE,GAAG,SAAS,EAAE,CAAA;IACnC,MAAM,CAAC,aAAa,EAAE,gBAAgB,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACtD,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACpD,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACpD,MAAM,CAAC,YAAY,EAAE,eAAe,CAAC,GAAG,QAAQ,CAAC,EAAE,CAAC,CAAA;IACpD,MAAM,CAAC,mBAAmB,EAAE,sBAAsB,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IAErE,8DAA8D;IAC9D,MAAM,EAAE,OAAO,EAAE,GAAG,OAAO,CAAM,KAAK,CAAC,CAAA;IAEvC,MAAM,KAAK,GAAG,OAAO,CACnB,CAAC,aAAa,IAAI,YAAY,CAAC,IAAI,YAAY,IAAI,YAAY,CAChE,CAAA;IAED,SAAS,YAAY;QACnB,IAAI,aAAa,IAAI,YAAY,EAAE;YACjC,OAAO,CAAC,SAAS,CAAC,EAAE,IAAI,EAAE,aAAa,EAAE,MAAM,EAAE,YAAY,EAAE,CAAC,CAAA;SACjE;QACD,IAAI,YAAY,EAAE;YAChB,OAAO,CAAC,SAAS,CAAC,EAAE,MAAM,EAAE,YAAY,EAAE,CAAC,CAAA;SAC5C;QACD,IAAI,YAAY,EAAE;YAChB,OAAO,CAAC,SAAS,CAAC,EAAE,MAAM,EAAE,YAAY,EAAE,CAAC,CAAA;SAC5C;IACH,CAAC;IAED,SAAS,WAAW;QAClB,gBAAgB,CAAC,EAAE,CAAC,CAAA;QACpB,eAAe,CAAC,EAAE,CAAC,CAAA;QACnB,eAAe,CAAC,EAAE,CAAC,CAAA;QACnB,eAAe,CAAC,EAAE,CAAC,CAAA;QACnB,OAAO,EAAE,CAAA;IACX,CAAC;IAED,OAAO,CACL,oBAAC,MAAM,IAAC,IAAI,EAAE,IAAI,EAAE,OAAO,EAAE,WAAW,EAAE,KAAK,EAAC,mBAAmB;QACjE,8BAAM,QAAQ,EAAE,YAAY;YAC1B,oBAAC,aAAa,IAAC,SAAS,EAAE,OAAO,CAAC,aAAa;gBAC7C,oBAAC,iBAAiB,iHAGE;gBACpB,oBAAC,SAAS,IACR,EAAE,EAAC,gBAAgB,EACnB,IAAI,EAAC,SAAS,EACd,KAAK,EAAC,aAAa,EACnB,OAAO,EAAC,UAAU,EAClB,KAAK,EAAE,aAAa,EACpB,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,gBAAgB,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,GACvD;gBACF,oBAAC,SAAS,IACR,EAAE,EAAC,eAAe,EAClB,IAAI,EAAC,QAAQ,EACb,KAAK,EAAC,YAAY,EAClB,OAAO,EAAC,UAAU,EAClB,KAAK,EAAE,YAAY,EACnB,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,eAAe,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,GACtD;gBACF,oBAAC,iBAAiB,IAChB,OAAO,EAAE,GAAG,EAAE,CAAC,sBAAsB,CAAC,CAAC,mBAAmB,CAAC;oBAE3D,oBAAC,UAAU,IACT,SAAS,EAAE,EAAE,CAAC,OAAO,CAAC,MAAM,EAAE;4BAC5B,CAAC,OAAO,CAAC,UAAU,CAAC,EAAE,mBAAmB;yBAC1C,CAAC,mBACa,mBAAmB,gBACvB,WAAW;wBAEtB,oBAAC,cAAc,OAAG,CACP;uCAEK;gBACpB,oBAAC,QAAQ,IAAC,EAAE,EAAE,mBAAmB;oBAC/B,6BAAK,SAAS,EAAE,OAAO,CAAC,aAAa;wBACnC,oBAAC,iBAAiB,oQAKE;wBACpB,oBAAC,SAAS,IACR,EAAE,EAAC,eAAe,EAClB,IAAI,EAAC,QAAQ,EACb,KAAK,EAAC,eAAe,EACrB,OAAO,EAAC,UAAU,EAClB,KAAK,EAAE,YAAY,EACnB,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,eAAe,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,GACtD;wBACF,oBAAC,SAAS,IACR,EAAE,EAAC,eAAe,EAClB,IAAI,EAAC,QAAQ,EACb,KAAK,EAAC,eAAe,EACrB,OAAO,EAAC,UAAU,EAClB,KAAK,EAAE,YAAY,EACnB,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,eAAe,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,GACtD,CACE,CACG,CACG;YAChB,oBAAC,aAAa;gBACZ,oBAAC,MAAM,IAAC,OAAO,EAAC,WAAW,EAAC,OAAO,EAAE,WAAW,aAEvC;gBACT,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,KAAK,EAAC,SAAS,EACf,OAAO,EAAE,YAAY,EACrB,QAAQ,EAAE,CAAC,KAAK,aAGT,CACK,CACX,CACA,CACV,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,gBAAgB,CAAC,CAAA"}

package/esm/PluginStoreWidget/components/InstalledPlugin.d.ts

@@ -1,4 +1,4 @@
-/// <reference types="react" />
+import React from 'react';
 import PluginManager from '@jbrowse/core/PluginManager';
 import { BasePlugin } from '@jbrowse/core/util/types';
 import { PluginStoreModel } from '../model';
@@ -6,6 +6,6 @@ declare function InstalledPlugin({ plugin, model, pluginManager, }: {
     plugin: BasePlugin;
     model: PluginStoreModel;
     pluginManager: PluginManager;
-}): JSX.Element;
+}): React.JSX.Element;
 declare const _default: typeof InstalledPlugin;
 export default _default;

package/esm/PluginStoreWidget/components/InstalledPluginsList.d.ts

@@ -1,9 +1,9 @@
-/// <reference types="react" />
+import React from 'react';
 import PluginManager from '@jbrowse/core/PluginManager';
 import { PluginStoreModel } from '../model';
 declare function InstalledPluginsList({ pluginManager, model, }: {
     pluginManager: PluginManager;
     model: PluginStoreModel;
-}): JSX.Element;
+}): React.JSX.Element;
 declare const _default: typeof InstalledPluginsList;
 export default _default;

package/esm/PluginStoreWidget/components/PluginCard.d.ts

@@ -1,9 +1,9 @@
-/// <reference types="react" />
+import React from 'react';
 import { JBrowsePlugin } from '@jbrowse/core/util/types';
 import { PluginStoreModel } from '../model';
 declare const _default: ({ plugin, model, adminMode, }: {
     plugin: JBrowsePlugin;
     model: PluginStoreModel;
     adminMode: boolean;
-}) => JSX.Element;
+}) => React.JSX.Element;
 export default _default;

package/esm/PluginStoreWidget/components/PluginStoreWidget.d.ts

@@ -1,7 +1,7 @@
-/// <reference types="react" />
+import React from 'react';
 import { PluginStoreModel } from '../model';
 declare function PluginStoreWidget({ model }: {
     model: PluginStoreModel;
-}): JSX.Element;
+}): React.JSX.Element;
 declare const _default: typeof PluginStoreWidget;
 export default _default;

package/esm/PluginStoreWidget/components/PluginStoreWidget.js

@@ -91,14 +91,11 @@ function PluginStoreWidget({ model }) {
                 React.createElement(Typography, { variant: "h5" }, "Available plugins")),
             error ? (React.createElement(Typography, { color: "error" }, `${error}`)) : pluginArray ? (pluginArray
                 .filter(plugin => {
-                // If pugin only has cjsUrl, don't display outside desktop
-                if (!isElectron &&
-                    !(plugin.esmUrl || plugin.url || plugin.umdUrl)) {
-                    return false;
-                }
-                return plugin.name
-                    .toLowerCase()
-                    .includes(model.filterText.toLowerCase());
+                // If plugin only has cjsUrl, don't display outside desktop
+                return (!(isElectron && plugin.cjsUrl) &&
+                    plugin.name
+                        .toLowerCase()
+                        .includes(model.filterText.toLowerCase()));
             })
                 .map(plugin => (React.createElement(PluginCard, { key: plugin.name, plugin: plugin, model: model, adminMode: !!adminMode })))) : (React.createElement(LoadingEllipses, null)))));
 }

package/esm/PluginStoreWidget/components/PluginStoreWidget.js.map

@@ -1 +1 @@
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+{"version":3,"file":"PluginStoreWidget.js","sourceRoot":"","sources":["../../../src/PluginStoreWidget/components/PluginStoreWidget.tsx"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,EAAE,QAAQ,EAAE,SAAS,EAAE,MAAM,OAAO,CAAA;AAElD,OAAO,EACL,SAAS,EACT,gBAAgB,EAChB,MAAM,EACN,UAAU,EACV,cAAc,EACd,SAAS,EACT,UAAU,GACX,MAAM,eAAe,CAAA;AACtB,OAAO,EAAE,UAAU,EAAE,MAAM,eAAe,CAAA;AAC1C,OAAO,EAAE,QAAQ,EAAE,MAAM,YAAY,CAAA;AACrC,OAAO,EAAE,MAAM,EAAE,MAAM,iBAAiB,CAAA;AAExC,OAAO,EAAE,eAAe,EAAE,MAAM,kBAAkB,CAAA;AAClD,OAAO,EAAE,UAAU,EAAE,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAE3D,QAAQ;AACR,OAAO,cAAc,MAAM,gCAAgC,CAAA;AAC3D,OAAO,SAAS,MAAM,2BAA2B,CAAA;AACjD,OAAO,gBAAgB,MAAM,kCAAkC,CAAA;AAE/D,SAAS;AACT,OAAO,oBAAoB,MAAM,wBAAwB,CAAA;AACzD,OAAO,UAAU,MAAM,cAAc,CAAA;AACrC,OAAO,gBAAgB,MAAM,oBAAoB,CAAA;AAGjD,MAAM,SAAS,GAAG,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;IACvC,IAAI,EAAE;QACJ,MAAM,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC;KACzB;IACD,UAAU,EAAE;QACV,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,QAAQ,CAAC,YAAY;KAC3C;IACD,UAAU,EAAE;QACV,MAAM,EAAE,OAAO;QACf,YAAY,EAAE,CAAC;QACf,eAAe,EAAE,KAAK,CAAC,OAAO,CAAC,UAAU,CAAC,IAAI;QAC9C,OAAO,EAAE,KAAK;QACd,OAAO,EAAE,MAAM;QACf,YAAY,EAAE,QAAQ;KACvB;IACD,kBAAkB,EAAE;QAClB,MAAM,EAAE,OAAO;QACf,OAAO,EAAE,MAAM;QACf,cAAc,EAAE,QAAQ;KACzB;CACF,CAAC,CAAC,CAAA;AAEH,SAAS,iBAAiB,CAAC,EAAE,KAAK,EAA+B;IAC/D,MAAM,EAAE,OAAO,EAAE,GAAG,SAAS,EAAE,CAAA;IAC/B,MAAM,CAAC,WAAW,EAAE,cAAc,CAAC,GAAG,QAAQ,EAAmB,CAAA;IACjE,MAAM,CAAC,KAAK,EAAE,QAAQ,CAAC,GAAG,QAAQ,EAAW,CAAA;IAC7C,MAAM,CAAC,oBAAoB,EAAE,uBAAuB,CAAC,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAA;IACvE,MAAM,EAAE,SAAS,EAAE,GAAG,UAAU,CAAC,KAAK,CAAC,CAAA;IACvC,MAAM,EAAE,aAAa,EAAE,GAAG,MAAM,CAAC,KAAK,CAAC,CAAA;IAEvC,SAAS,CAAC,GAAG,EAAE;QACb,MAAM,UAAU,GAAG,IAAI,eAAe,EAAE,CAAA;QACxC,MAAM,EAAE,MAAM,EAAE,GAAG,UAAU,CAG5B;QAAA,CAAC,KAAK,IAAI,EAAE;YACX,IAAI;gBACF,MAAM,QAAQ,GAAG,MAAM,KAAK,CAC1B,+CAA+C,EAC/C,EAAE,MAAM,EAAE,CACX,CAAA;gBACD,IAAI,CAAC,QAAQ,CAAC,EAAE,EAAE;oBAChB,MAAM,GAAG,GAAG,MAAM,QAAQ,CAAC,IAAI,EAAE,CAAA;oBACjC,MAAM,IAAI,KAAK,CACb,gCAAgC,QAAQ,CAAC,MAAM,IAAI,QAAQ,CAAC,UAAU,IAAI,GAAG,EAAE,CAChF,CAAA;iBACF;gBACD,MAAM,KAAK,GAAG,MAAM,QAAQ,CAAC,IAAI,EAAE,CAAA;gBACnC,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE;oBACnB,cAAc,CAAC,KAAK,CAAC,OAAO,CAAC,CAAA;iBAC9B;aACF;YAAC,OAAO,CAAC,EAAE;gBACV,OAAO,CAAC,KAAK,CAAC,CAAC,CAAC,CAAA;gBAChB,QAAQ,CAAC,CAAC,CAAC,CAAA;aACZ;QACH,CAAC,CAAC,EAAE,CAAA;QAEJ,OAAO,GAAG,EAAE;YACV,UAAU,CAAC,KAAK,EAAE,CAAA;QACpB,CAAC,CAAA;IACH,CAAC,EAAE,EAAE,CAAC,CAAA;IAEN,OAAO,CACL,6BAAK,SAAS,EAAE,OAAO,CAAC,IAAI;QACzB,SAAS,IAAI,CACZ;YACG,CAAC,UAAU,IAAI,CACd,6BAAK,SAAS,EAAE,OAAO,CAAC,UAAU;gBAChC,oBAAC,gBAAgB,IAAC,KAAK,EAAE,EAAE,WAAW,EAAE,OAAO,EAAE,GAAI;gBACrD,oBAAC,UAAU;;oBACS,iDAAyB;kKAGhC,CACT,CACP;YACD,6BAAK,SAAS,EAAE,OAAO,CAAC,kBAAkB;gBACxC,oBAAC,MAAM,IACL,OAAO,EAAC,WAAW,EACnB,OAAO,EAAE,GAAG,EAAE,CAAC,uBAAuB,CAAC,IAAI,CAAC,wBAGrC,CACL;YACN,oBAAC,gBAAgB,IACf,IAAI,EAAE,oBAAoB,EAC1B,OAAO,EAAE,GAAG,EAAE,CAAC,uBAAuB,CAAC,KAAK,CAAC,EAC7C,KAAK,EAAE,KAAK,GACZ,CACD,CACJ;QACD,oBAAC,SAAS,IACR,KAAK,EAAC,gBAAgB,EACtB,KAAK,EAAE,KAAK,CAAC,UAAU,EACvB,QAAQ,EAAE,KAAK,CAAC,EAAE,CAAC,KAAK,CAAC,aAAa,CAAC,KAAK,CAAC,MAAM,CAAC,KAAK,CAAC,EAC1D,SAAS,QACT,UAAU,EAAE;gBACV,YAAY,EAAE,CACZ,oBAAC,cAAc,IAAC,QAAQ,EAAC,KAAK;oBAC5B,oBAAC,UAAU,IAAC,OAAO,EAAE,GAAG,EAAE,CAAC,KAAK,CAAC,eAAe,EAAE;wBAChD,oBAAC,SAAS,OAAG,CACF,CACE,CAClB;aACF,GACD;QACF,oBAAC,SAAS,IAAC,eAAe;YACxB,oBAAC,gBAAgB,IACf,UAAU,EAAE,oBAAC,cAAc,IAAC,SAAS,EAAE,OAAO,CAAC,UAAU,GAAI;gBAE7D,oBAAC,UAAU,IAAC,OAAO,EAAC,IAAI,wBAA+B,CACtC;YACnB,6BAAK,KAAK,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE;gBAC3B,oBAAC,oBAAoB,IAAC,aAAa,EAAE,aAAa,EAAE,KAAK,EAAE,KAAK,GAAI,CAChE,CACI;QACZ,oBAAC,SAAS,IAAC,eAAe;YACxB,oBAAC,gBAAgB,IACf,UAAU,EAAE,oBAAC,cAAc,IAAC,SAAS,EAAE,OAAO,CAAC,UAAU,GAAI;gBAE7D,oBAAC,UAAU,IAAC,OAAO,EAAC,IAAI,wBAA+B,CACtC;YAClB,KAAK,CAAC,CAAC,CAAC,CACP,oBAAC,UAAU,IAAC,KAAK,EAAC,OAAO,IAAE,GAAG,KAAK,EAAE,CAAc,CACpD,CAAC,CAAC,CAAC,WAAW,CAAC,CAAC,CAAC,CAChB,WAAW;iBACR,MAAM,CAAC,MAAM,CAAC,EAAE;gBACf,2DAA2D;gBAC3D,OAAO,CACL,CAAC,CAAC,UAAU,IAAI,MAAM,CAAC,MAAM,CAAC;oBAC9B,MAAM,CAAC,IAAI;yBACR,WAAW,EAAE;yBACb,QAAQ,CAAC,KAAK,CAAC,UAAU,CAAC,WAAW,EAAE,CAAC,CAC5C,CAAA;YACH,CAAC,CAAC;iBACD,GAAG,CAAC,MAAM,CAAC,EAAE,CAAC,CACb,oBAAC,UAAU,IACT,GAAG,EAAE,MAAM,CAAC,IAAI,EAChB,MAAM,EAAE,MAAM,EACd,KAAK,EAAE,KAAK,EACZ,SAAS,EAAE,CAAC,CAAC,SAAS,GACtB,CACH,CAAC,CACL,CAAC,CAAC,CAAC,CACF,oBAAC,eAAe,OAAG,CACpB,CACS,CACR,CACP,CAAA;AACH,CAAC;AAED,eAAe,QAAQ,CAAC,iBAAiB,CAAC,CAAA"}

package/esm/SetDefaultSession/SetDefaultSession.d.ts

@@ -1,6 +1,6 @@
-/// <reference types="react" />
+import React from 'react';
 declare const SetDefaultSession: ({ rootModel, onClose }: {
     rootModel?: unknown;
     onClose: () => void;
-}) => JSX.Element | null;
+}) => React.JSX.Element | null;
 export default SetDefaultSession;

package/esm/index.d.ts

@@ -4,22 +4,22 @@ import PluginManager from '@jbrowse/core/PluginManager';
 declare const SetDefaultSession: import("react").LazyExoticComponent<({ rootModel, onClose }: {
     rootModel?: unknown;
     onClose: () => void;
-}) => JSX.Element | null>;
+}) => import("react").JSX.Element | null>;
 declare const AssemblyManager: import("react").LazyExoticComponent<({ rootModel, onClose, }: {
     rootModel: any;
     onClose: (arg: boolean) => void;
-}) => JSX.Element>;
+}) => import("react").JSX.Element>;
 export default class extends Plugin {
     name: string;
     exports: {
         AssemblyManager: import("react").LazyExoticComponent<({ rootModel, onClose, }: {
             rootModel: any;
             onClose: (arg: boolean) => void;
-        }) => JSX.Element>;
+        }) => import("react").JSX.Element>;
         SetDefaultSession: import("react").LazyExoticComponent<({ rootModel, onClose }: {
             rootModel?: unknown;
             onClose: () => void;
-        }) => JSX.Element | null>;
+        }) => import("react").JSX.Element | null>;
     };
     install(pluginManager: PluginManager): void;
     configure(_pluginManager: PluginManager): void;

package/esm/ucsc-trackhub/configSchema.d.ts

@@ -1,2 +1,33 @@
-declare const UCSCTrackHubConnection: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+declare const UCSCTrackHubConnection: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+    /**
+     * #slot
+     */
+    hubTxtLocation: {
+        type: string;
+        defaultValue: {
+            uri: string;
+            locationType: string;
+        };
+        description: string;
+    };
+    /**
+     * #slot
+     */
+    assemblyNames: {
+        type: string;
+        defaultValue: never[];
+        description: string;
+    };
+}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+    name: {
+        type: string;
+        defaultValue: string;
+        description: string;
+    };
+    assemblyNames: {
+        type: string;
+        defaultValue: never[];
+        description: string;
+    };
+}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "connectionId">>, undefined>>;
 export default UCSCTrackHubConnection;

package/esm/ucsc-trackhub/model.d.ts

@@ -2,8 +2,45 @@ import PluginManager from '@jbrowse/core/PluginManager';
 export default function UCSCTrackHubConnection(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
     name: import("mobx-state-tree").ISimpleType<string>;
     tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
+    configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+        name: {
+            type: string;
+            defaultValue: string;
+            description: string;
+        };
+        assemblyNames: {
+            type: string;
+            defaultValue: never[];
+            description: string;
+        };
+    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "connectionId">>;
 } & {
-    configuration: import("mobx-state-tree").ITypeUnion<any, any, any>;
+    configuration: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+        hubTxtLocation: {
+            type: string;
+            defaultValue: {
+                uri: string;
+                locationType: string;
+            };
+            description: string;
+        };
+        assemblyNames: {
+            type: string;
+            defaultValue: never[];
+            description: string;
+        };
+    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
+        name: {
+            type: string;
+            defaultValue: string;
+            description: string;
+        };
+        assemblyNames: {
+            type: string;
+            defaultValue: never[];
+            description: string;
+        };
+    }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "connectionId">>, undefined>>;
     type: import("mobx-state-tree").ISimpleType<"UCSCTrackHubConnection">;
 }, {
     afterAttach(): void;